|
|
Homology
BLAST of mRNA_F-serratus_M_contig1144.1235.1 vs. uniprot
Match: D8LD21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD21_ECTSI) HSP 1 Score: 182 bits (461), Expect = 3.920e-54 Identity = 84/120 (70.00%), Postives = 106/120 (88.33%), Query Frame = 2
Query: 80 WTDNYERWDAWQDPEDEATQRRQAEEKRVLKNFKETNMSCAHDRSAERKLMEMALEDKIAACREFRHKGNLFHGEGQYRRAALQYRQALIYYDFCFPEKDSEQKELDEIRQACLLNSAAC 439
WT Y++WD W+DP DE ++R+ EEKR K+++E +M+CAHDRSAERK+MEM +E+KI+ACR+FR +GNLFH EGQYRR ALQYRQALIYYDFCFP++DS+Q+ELD+IRQACLLNSAAC
Sbjct: 20 WTHTYDKWDGWEDP-DELAKKREEEEKRA-KSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAAC 137
BLAST of mRNA_F-serratus_M_contig1144.1235.1 vs. uniprot
Match: A0A484DVF5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVF5_BRELC) HSP 1 Score: 122 bits (307), Expect = 3.970e-31 Identity = 60/124 (48.39%), Postives = 84/124 (67.74%), Query Frame = 2
Query: 68 KSRCWTDNYERWDAWQDPEDEATQRRQAEEKRVLKNFKETNMSCAHDRSAERKLMEMALEDKIAACREFRHKGNLFHGEGQYRRAALQYRQALIYYDFCFPEKDSEQKELDEIRQACLLNSAAC 439
KS WT Y+RWDAW+DPE+ A Q +A E+ V +T MSC HD SAE+K+M+M +K++AC EFR GNLF GQY+RAA Y +AL+Y+++ FP+ D+E+ + D ++ LLN AC
Sbjct: 50 KSYDWTRTYKRWDAWEDPEELARQELEARERSVRAT--KTQMSCNHDHSAEKKVMDMTTYEKLSACGEFRVLGNLFFQHGQYQRAAYHYNKALVYFEYMFPDTDAEEAQADALKLKMLLNFTAC 171
BLAST of mRNA_F-serratus_M_contig1144.1235.1 vs. uniprot
Match: A0A8K1CDM7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDM7_PYTOL) HSP 1 Score: 121 bits (303), Expect = 1.860e-30 Identity = 60/122 (49.18%), Postives = 85/122 (69.67%), Query Frame = 2
Query: 80 WTDNYERWDAWQDPEDEATQRRQAEEK--RVLKNFKETNMSCAHDRSAERKLMEMALEDKIAACREFRHKGNLFHGEGQYRRAALQYRQALIYYDFCFPEKDSEQKELDEIRQACLLNSAAC 439
WT YE+WDAW+DPE+ A + ++A EK R LK+ +++ C HD SAE+KLM+M + K+ AC EFR GNLF +GQY+RAA Y +AL+Y+++ FPE D E K+ D+++ LLN AC
Sbjct: 61 WTSVYEKWDAWEDPEELAQREQEAREKHERALKSQQQS--MCNHDHSAEQKLMDMTTDAKLCACDEFRVLGNLFFAQGQYQRAAYNYHKALVYFEYIFPEGDDENKQHDQLKLTTLLNYCAC 180
BLAST of mRNA_F-serratus_M_contig1144.1235.1 vs. uniprot
Match: A0A836CM33_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM33_9STRA) HSP 1 Score: 119 bits (298), Expect = 4.660e-30 Identity = 61/122 (50.00%), Postives = 81/122 (66.39%), Query Frame = 2
Query: 80 WTDNYERWDAWQDPEDEATQRRQAEEK--RVLKNFKETNMSCAHDRSAERKLMEMALEDKIAACREFRHKGNLFHGEGQYRRAALQYRQALIYYDFCFPEKDSEQKELDEIRQACLLNSAAC 439
WT Y WD W+DPE A + EK R ++ + + C+HD SAE+++M+++ +K+AAC FR KGN F EGQY+RA LQYRQALIY D+ FP+ Q LD++R ACLLNSAAC
Sbjct: 21 WTRTYSYWDRWEDPEQGARPAKDNAEKTDRAARS-QALSGCCSHDHSAEKRIMDLSEPEKVAACEAFRAKGNAFFEEGQYQRATLQYRQALIYCDYAFPDAGELQTRLDDVRLACLLNSAAC 141
BLAST of mRNA_F-serratus_M_contig1144.1235.1 vs. uniprot
Match: D0NSG6_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NSG6_PHYIT) HSP 1 Score: 119 bits (297), Expect = 1.060e-29 Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = 2
Query: 80 WTDNYERWDAWQDPEDEATQRRQAEEKRVLKNFKETNMSCAHDRSAERKLMEMALEDKIAACREFRHKGNLFHGEGQYRRAALQYRQALIYYDFCFPEKDSEQKELDEIRQACLLNSAAC 439
WT YE+WDAW+DPED A Q ++A E+ + + M C HD SAE+KLM+M ++K AC E R GNLF GQY+RAA Y +AL+Y+++ FP+ D E+ + D ++ LLN AAC
Sbjct: 42 WTRTYEKWDAWEDPEDLARQEQEARER--SERAAKAQMGCNHDHSAEQKLMDMTTQEKTTACDELRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFPDTDEEEAQADALKLKLLLNFAAC 159
BLAST of mRNA_F-serratus_M_contig1144.1235.1 vs. uniprot
Match: K3WFS9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFS9_GLOUD) HSP 1 Score: 117 bits (294), Expect = 3.780e-29 Identity = 58/122 (47.54%), Postives = 82/122 (67.21%), Query Frame = 2
Query: 80 WTDNYERWDAWQDPEDEATQRRQAEEK--RVLKNFKETNMSCAHDRSAERKLMEMALEDKIAACREFRHKGNLFHGEGQYRRAALQYRQALIYYDFCFPEKDSEQKELDEIRQACLLNSAAC 439
WT YE+WDAW+DPE+ A Q ++A E+ RV + + C HD SAE+KLM+M ++K+ AC EFR GNLF GQY+RAA Y +AL+Y+++ FP+ D+E + D ++ LLN AAC
Sbjct: 59 WTKTYEKWDAWEDPEELARQEQEARERSERVARE----QLGCNHDHSAEQKLMDMMTQEKLDACDEFRQLGNLFFQHGQYQRAAYHYHKALVYFEYIFPDTDAETEHHDALKLKVLLNFAAC 176
BLAST of mRNA_F-serratus_M_contig1144.1235.1 vs. uniprot
Match: A0A2D4CGS1_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGS1_PYTIN) HSP 1 Score: 115 bits (289), Expect = 8.160e-29 Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 2
Query: 80 WTDNYERWDAWQDPEDEATQRRQAEEKRVLKNFKETNMSCAHDRSAERKLMEMALEDKIAACREFRHKGNLFHGEGQYRRAALQYRQALIYYDFCFPEKDSEQKELDEIRQACLLNSAAC 439
WT YE+WDAW+DPE+ A + + A EK C HD S E++LM+M +K+ AC EFR GNLF +GQY+RAA Y +AL+Y+++ FP+ D E + D +R LLN AAC
Sbjct: 66 WTSVYEKWDAWEDPEELAQREQAAREKXXXAARAAAQGPCNHDHSTEQRLMDMTTTEKLTACDEFRRLGNLFFEQGQYQRAAYHYHKALVYFEYVFPDTDDENEAFDSLRLKTLLNFAAC 185
BLAST of mRNA_F-serratus_M_contig1144.1235.1 vs. uniprot
Match: A0A662XSD5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSD5_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.130e-28 Identity = 56/120 (46.67%), Postives = 80/120 (66.67%), Query Frame = 2
Query: 80 WTDNYERWDAWQDPEDEATQRRQAEEKRVLKNFKETNMSCAHDRSAERKLMEMALEDKIAACREFRHKGNLFHGEGQYRRAALQYRQALIYYDFCFPEKDSEQKELDEIRQACLLNSAAC 439
WT YE+WDAW+DPE+ A Q + A E+ + + M C HD SAE+KLM+M+ ++K+ AC EFR GNLF GQY+RAA Y +AL+Y+++ FP+ + E + D ++ LLN AAC
Sbjct: 98 WTRTYEKWDAWEDPEELARQEQAARER--SERAAKAQMGCNHDHSAEQKLMDMSTQEKLTACDEFRVLGNLFFRHGQYQRAAYNYHKALVYFEYVFPDTEEEDIQADALKLKLLLNFAAC 215
BLAST of mRNA_F-serratus_M_contig1144.1235.1 vs. uniprot
Match: A0A6G0XP24_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP24_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.760e-27 Identity = 53/120 (44.17%), Postives = 78/120 (65.00%), Query Frame = 2
Query: 80 WTDNYERWDAWQDPEDEATQRRQAEEKRVLKNFKETNMSCAHDRSAERKLMEMALEDKIAACREFRHKGNLFHGEGQYRRAALQYRQALIYYDFCFPEKDSEQKELDEIRQACLLNSAAC 439
WT NYE+W AW+DPE+ A + ++ +K + SC HD SAE+KLM+M+ +DK+ C FR GN F GQY+RAA Y +ALIY+++ F + D EQ ++D++++ LLN A C
Sbjct: 60 WTRNYEKWQAWEDPEELAAKEKELRDKSERAQMR---TSCNHDHSAEQKLMDMSTQDKLIKCDAFRRLGNRFFAHGQYQRAAYHYHRALIYFEYVFCDTDDEQHQMDDLKKRALLNFALC 176
BLAST of mRNA_F-serratus_M_contig1144.1235.1 vs. uniprot
Match: H3GDM9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GDM9_PHYRM) HSP 1 Score: 112 bits (279), Expect = 3.700e-27 Identity = 59/135 (43.70%), Postives = 80/135 (59.26%), Query Frame = 2
Query: 35 KALRLTMQHLSKSRCWTDNYERWDAWQDPEDEATQRRQAEEKRVLKNFKETNMSCAHDRSAERKLMEMALEDKIAACREFRHKGNLFHGEGQYRRAALQYRQALIYYDFCFPEKDSEQKELDEIRQACLLNSAAC 439
KA + Q+ K WT YE+WDAW+DPED A Q ++A E+ + + M C+HD SAE+KLM+M +K+AAC EFR GNLF GQY+RAA Y +AL+Y+++ F + LLN AAC
Sbjct: 44 KAAKAADQNGEKGYDWTRTYEKWDAWEDPEDLARQEQEARER--SERAAKAQMGCSHDHSAEQKLMDMTTLEKLAACDEFRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFTDXXXXXXXXXXXXXXLLLNFAAC 176
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 181.8 |
| Seed ortholog evalue | 2e-43 |
| Seed eggNOG ortholog | 2880.D8LD21 |
| KEGG ko | ko:K09571,ko:K20412 |
| KEGG Pathway | ko04915,map04915 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0032501,GO:0032502,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0071704,GO:0071944,GO:0099402,GO:0140096,GO:1901564 |
| EggNOG free text desc. | FK506 binding |
| EggNOG OGs | COG0545@1,KOG0543@2759 |
| EC | 5.2.1.8 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03110,ko04090 |
| Exons | 4 |
| Model size | 440 |
| Cds size | 387 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929045.2471128-UTR-F-serratus_M_contig1144:91580..91632 | 1622929045.2471128-UTR-F-serratus_M_contig1144:91580..91632 | Fucus serratus male | UTR | F-serratus_M_contig1144 91581..91632 + |
| 1690962679.921047-UTR-F-serratus_M_contig1144:91580..91632 | 1690962679.921047-UTR-F-serratus_M_contig1144:91580..91632 | Fucus serratus male | UTR | F-serratus_M_contig1144 91581..91632 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929045.2596076-CDS-F-serratus_M_contig1144:91632..91695 | 1622929045.2596076-CDS-F-serratus_M_contig1144:91632..91695 | Fucus serratus male | CDS | F-serratus_M_contig1144 91633..91695 + |
| 1690962679.9308753-CDS-F-serratus_M_contig1144:91632..91695 | 1690962679.9308753-CDS-F-serratus_M_contig1144:91632..91695 | Fucus serratus male | CDS | F-serratus_M_contig1144 91633..91695 + |
| 1622929045.268829-CDS-F-serratus_M_contig1144:98366..98468 | 1622929045.268829-CDS-F-serratus_M_contig1144:98366..98468 | Fucus serratus male | CDS | F-serratus_M_contig1144 98367..98468 + |
| 1690962679.9383566-CDS-F-serratus_M_contig1144:98366..98468 | 1690962679.9383566-CDS-F-serratus_M_contig1144:98366..98468 | Fucus serratus male | CDS | F-serratus_M_contig1144 98367..98468 + |
| 1622929045.2808828-CDS-F-serratus_M_contig1144:99676..99799 | 1622929045.2808828-CDS-F-serratus_M_contig1144:99676..99799 | Fucus serratus male | CDS | F-serratus_M_contig1144 99677..99799 + |
| 1690962679.950387-CDS-F-serratus_M_contig1144:99676..99799 | 1690962679.950387-CDS-F-serratus_M_contig1144:99676..99799 | Fucus serratus male | CDS | F-serratus_M_contig1144 99677..99799 + |
| 1622929045.2901182-CDS-F-serratus_M_contig1144:104508..104607 | 1622929045.2901182-CDS-F-serratus_M_contig1144:104508..104607 | Fucus serratus male | CDS | F-serratus_M_contig1144 104509..104607 + |
| 1690962679.9581203-CDS-F-serratus_M_contig1144:104508..104607 | 1690962679.9581203-CDS-F-serratus_M_contig1144:104508..104607 | Fucus serratus male | CDS | F-serratus_M_contig1144 104509..104607 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1144.1235.1 >prot_F-serratus_M_contig1144.1235.1 ID=prot_F-serratus_M_contig1144.1235.1|Name=mRNA_F-serratus_M_contig1144.1235.1|organism=Fucus serratus male|type=polypeptide|length=129bp
MQHLSKSRCWTDNYERWDAWQDPEDEATQRRQAEEKRVLKNFKETNMSCA HDRSAERKLMEMALEDKIAACREFRHKGNLFHGEGQYRRAALQYRQALIY YDFCFPEKDSEQKELDEIRQACLLNSAAC back to topmRNA from alignment at F-serratus_M_contig1144:91581..104607+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1144.1235.1 ID=mRNA_F-serratus_M_contig1144.1235.1|Name=mRNA_F-serratus_M_contig1144.1235.1|organism=Fucus serratus male|type=mRNA|length=13027bp|location=Sequence derived from alignment at F-serratus_M_contig1144:91581..104607+ (Fucus serratus male) GCCTAACTGGGCTGTTGTAGACTATATTTGAGACAAGGCATTACGGTTGA
CGATGCAGCATCTGAGCAAAAGTCGTTGCTGGACGGACAATTACGAGCGA
TGGGATGCGTGGCAGGTGAGAACCTTTCTCCGGTAACTAGACGACTACGA
GTACAGCAATCCGTCAGCTATGATACCTTTATGACTTGTAAATACAAGGA
GAGCTTAGAGGGAGGTTTCACGGAACAAAGTTACACTCGCTGTCAGTCTA
GCGAAACGGTCAGAGAACGCTGCTGTTGTGCTTGAGGCTGCGCGTGTGAA
GACGATCAAGGCGCTCTCTTGGCCCCGATTGGAGCGGCGATCAATAGAGG
AACGAAGCACGTTTCTGTGTACGAGTGCTGTAATGATAATACGGTAAACC
ATGATATCTATTGCCGGTCGCCCCGGTGGTTCAGGTAACCTCGAAACCTT
CTGACGCTGGGACGTGAGTTCGATGCTCGGTGTAGTCACACGAACTGGGA
TTTTTCCTCACAAGAAGTAAAAATAAAAGAAAGATAAAAAATGCCCAACA
AGTGGAGAATGATAAATTCGTTAGTGTACACAAAACTCGACTGCCCACGG
TCGACGAGGGAAAGGATCCTTCTCGCGAGAAAAATCAAGGCACGCACCGC
ACAAGGCAGGTGAAGAAATCATGTGCGACCTTCCTCCTTGTCACCCCGGC
TGGTACGCCCACAATCCTGACGTCCAGAATAAATGGGACGAAATCATACA
ACACACACACTACAACTGTAGTGTTGACCTTACGCAACGACCATCGAGGA
ACCCGACTGAATCTCATGTCTAGATTTTATGCTCTCATTTTTTTATTGAT
TGATTGAATTCTCAGATAAGCTTATGGCAAAATCACCAACAAGTGGAGAA
TGATAAATTCGTTAGTACACAAAACTCGACTGCCCACGGTCGACGAGGGA
AAGGATCCTTCTCGCGAGAAAAATCAAGGCACGCACCGCACAAGGCAGGT
GAAGAAATCATGTGCGACCTTCCTCCTGTGTCACCCCGGCTGGTACGCCC
ACAATCCTGACGTCCAGAATAAATGGGACGAAAACATACAACACACACAC
TACAACTGTAGTGTTGACCTTACGCAACGATCATCGGGGACCGACTGAAT
CTCATGTCTAGATTTTATGCTCTCATTTTTTTATTGATTGATTGAATTCT
CAGATAAGCTTATGGCAAAATCCAGCCCATGATCATGAGGTAGAAAAACG
TCCTCCGTAAGTAAAATGTACAACGCTGTATGCTGTCCCTCGTGCCCTCT
CCCTCCGAAAGCTGGTTTTGGGGTATGAGTATGGAAGGGTCTTTCCGGCG
GGTGTAGGGCTGGACTCGCCCTCAAGAGATGCAACCAACTGACTGTCTTC
GCTATTCAGCCGGTCGATTGAGACGCGGCGGGGGCTTGGTTGGTGGAGGA
TGGTGTTCAACAGGTGCGCCTCTTCCGGGCTCCAATTTGGTGCCCTTCGG
GTGGTGGTGGCACGCGAGGGGCAGGGGGCACTGTCGCGGAAAGCCCGGTA
CAGCGCCGCAGCACGCGCAAGTCTGTTGCTGCCTGTACTGTTAGGTTAGT
AAGCACCAGATTCGGTGAGGGCGGAGAGCAGCTCGGTCGTCGACAGGCTA
GGGGAATGCTGAACCCTTGTGCGCGAGAATCAAAGGCGCGAACCAGGATG
GGAAAAGCTGATCTCTGACCACGATCTGCTTTCTTCCTACGAGGGCCAAC
AGGGAGCGGCGAACGGGCAAGATTTCTTGGGCATTTTCCAGGGATGCTTA
GGATTTTTGGATGGCTGGATGCTGGCTCGCGCGCTGACTTCACCAGCTGA
AGGTCTCCACCACCATGTGTTTTCTGTGTTTTCTTCCCATCCATTCTGGA
CATCAAGTTCGTTGGACGTACCAGCCGGGGTCACACAGGAGGGAGGCCAC
ACAGGATTTTTCATCCACCTTCCTTCTGCGGTGCGTGCCTTGATTTTTGT
CGCGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTCGAAT
TTGGTGTACTAACGAATTAATCGTTCTCCACCCATTGGGCATTTTTATTT
TGGTTTTTTAGTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAACTC
GTGTCCCAACGTGTCAGAAGGTTACGAGGTGCCTTCTGAGCTACCGGGGT
CGACCGGCTATGGAACTCGGTATTGCAATTTCCTTATTTCTGCATGACGT
GTGGCCTAGAGAAATTTGGACTTGTTTATCAAAACTGATTGAAGCGTGAT
TTGACCGCTTTGCTGCTGAGAACGCTAGCCGTGGGTAGCCGACAATATTC
GGAGTCGATCAAGGTTGCTCTCGGTATGGAGTAAGGAGGTTTGATGAAAG
GTTTTGACATTTGATCGAAAGTCTCAGCGTTGAAAGGTCTTACACGAGAG
GATGATGCTGTGGGTGGGGTAGTTGTTGCAGGCTCGAGAGGCCCACATTA
TACAGACGAATATAGAACCATATATTTATATTACATTGTTGGCCCAGAAC
ACATTAGTAAGGTCTCGAACACTGATGGTGGGGATATTCACCCTGGATAC
AAGGGGAACAATGAAGAAGCCCTCTGAGTCATAACGCAAATGTAACCGAC
TCCAATACTGGTATTCGTCCTGACCAGTGTAATATATCCGCATGTAAACA
TACATTGAGTACTTCTAACACCCCCTGCTCGATGATTGGTCAACATATAA
CTTACCAAATATTCGGACTGTAATGCCCCTCTGCTTTTAGCATGCAGTTC
CCAAAGCTGCAAAATGTTCACGCATGAACGAAAATCATGTTCGAACTTAT
CACACTCAACCATACTCAATTCTCACTTGGCATACTTAACTTACCGTTCC
TCCAACGGAAATTATCTCACCATTAGACCACCTTTTATGGCCGTTGTCTG
AAAAATTCGGAACCCAAAAACCGATAGTCCTGTTTTATGGGATTGCATTT
CGCCAAACACGACAAGCTCAAACCCATTTATTTATTTTGCCCTCGACTCC
ATTGTATGGAGGTCGGAAGCAATCGTATTTGCTGTTTTCGACTTGACGTA
GGCGTGTACCTTTGAAAGTACGACGAAGTTGCCATCCGACATAGCTGCTA
CACCCAGCACGCGTCGAGATCTCACCAAGGCAGAGAGGTCTATCCTCGGT
ACGCAACACTTTGTAGATGTCATACCCTTGGTCGACATCTACTGAACCAG
CACTCTCAGTTTACGTGGTTTTTTCCCCTTTCGCCCCAAGTCTCCTCCGT
TTTACACATCCTGTCTATCCTCTAGGAGTTTTTGCGTTTCATCGCCCCTC
CTCCGCCCTTCCCGATTCTGTCCCTCGCCTCCCATCCCTGAACTCTGGCC
CTCGGCATGATGCAACGGTCTCGCTGGGCCCGTCGGGTCTTGCGACTGTG
ACTGCCGGTTATTCGTTGGCGTCACCCCCTCTTTGGCGTCTTCCGCCTCA
CCTCTATTATCACTTAGTAGATACTGGACTCTCTCCCTCCTCTACTCCTC
TTCGTTCTTGTCTCCATTCTAGTTTCCGTCCCCGTTCCCTTCCCTATCCT
CGTTCCCATTTCCGCCCTCGTTCCCGTTCCCACGACGTCCCTGCTTTCGT
CACCGTTTCCTCCCTCCCGTCTCTGGGCCCTGAGTCTCCACTCTGTACAA
CATCGTCGGACAGTCCCCGGGTCTTGCGTCTGAAGCTGCTATCTACCTGC
GAGCGCCACTTCATGCCTACAGAGATAATGCCGCGTGCGAATTGGCAGTG
CCTGGTCTTCTACTCTGCTTATTTCCTGATGTGGCGAACTCGAGAGCTCT
CTTCTTCGCCCCCCCCCCTCTCCATTATCGTTCCCGGTTCCGACTTGCGT
TCTTCTCTCGTCCCCGTTCCCCGTTACCGCCCCGCCCCGTCCCCGTCCCC
GTCGCTTCTCCCGTTCCAAATCCCGACCCCGTCCCCGTTCACTCCATCTC
GTCCCACGGTCCTGGTTCCCCACTCGGTACACTGCGCGTGCACAGGCACT
GGACCCTGCGAACGCAGCTGTGCTGTTGGGTGCCCGCAAGCGTCACCCCC
TATCTACGGAGATGATGTCGCGTGCGGAATGAAAGTGCCTTCTGTAAAAC
TAAATGAAATCATTGAAGACGTGCTACTTCTGTTCCCTCAACCAGATGCC
GGGACTCGTTGGAGCGTATCTCCGACCCGTGCTCTACCCGTCTGGTGGCG
AGCTCTTCAATGAGGGCATGCACGCCTGGGTCGAGTTGATCGGGTGACGC
AATTACGTACCGATCGTGTTCACTGCTGAGAGTCCGCCCGCACAGGGCCA
GTAGTCATAGTCCTCGACGTAGCCCAAGTAACGGGTGCTGTCTATTTCAG
GTAGCCCCATAGATCAATATATATATATATACCCTCTTTTCCCACACCCA
CTGACTGTTGGTCCTGGACATGTGCGGTAACGAGACATGTAGAATCATAA
TATTTAGTAGTACATGTGTTTTTGTTTTCTTCCCATATATTCTGGACGTC
AAGTTCGTTGGATGTACCAGCCGGGGTCACACAGGAAGGTCACACAGGAT
TTCTCATCCACCTCCCTTCTGCGGTGCATGCCTTAATTTTTCTCGCGATA
TGGATTCAGCCATTCTTTTCCCTCGTCGACCGCGAAGTCGAATTTTGAGT
ACTAACGATTTAATCATTCTCCACTTGTTGGGCATTTTTATTTTATTTTA
GTTTTTAGTGAGGAAATATCCCAGTTACCGAGATTCAAACTCACGCCCCA
ACGACATGTATGTCAAAAGGTTACGAGGTGACCAACTGAGCTACGAATAC
CGGGGCGACCGTCCTGTATTTTTCACAATCTGTAGGATTAGCGTGGTTTG
TGTTTTATTAGTGACAAACTCAGCGAAGACTGGATGGTCGGTTGATGCTT
CCTGTTGATCTTGAATCAAACTTCATTGAAATTCGAAATCCTATACTACA
TTAGTGCTAGAGTAGGGTTTGCCTTTAAAACAATGTCTTGGCACGCGACA
GGTGGCTGCCATAACAACACCATCGGCCCTCCTCTGTGTGTAGTGTATGC
TATATGCTGTATAGTGTGAAGTGCATAATGTTAAGTATAATCTGTGTTGT
AGAGTTTATAGTGTATAATATGTAGTGCATAATCCTGCAGTCTAACGTAT
CGAGCTGGCATGTCATCCTAGTATGTGTGTGTGTGTGTGTGTGTGTGTGT
ATTTATTAAATTGCACATAACCACGCAATCCGGCCCTGTCATCCTACCTC
TATGCCCCTCGCAGTGTGTGTGTGTGTGTGTGTATTTGTTAAGTTGCATA
TAACCGCGCAATCCAGCCCTGTCATCCTAGTCATTTTGTGCGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGTGTGTGTGTGTGTA
TTGTCATCCCATTTATTCTAGACGTCAGGTTTGTGGACGTACCAGCCGGG
GTCCACAGGAGGGAGGTTACACAGGATTTCTCCTCCCTCCTTCTGTATAA
TGGTATAATTAGAGGCACACTACTGGCAAATACCAGAATATTGCATTCCT
GCGGAGTTCTCGGGCCTCTTGAAGAACCCAATACGGAGGAAAAGGAAACT
ATTAATAGTTATAATATTAATAGTTTCATTTACGATTCGCCAACAGCGCG
CGTGTGACGCCACGACTGCTACGAGCTGTAGAATGCTCGTGACCTATGAC
GCCCTGCTGTAGAATGCTGCATGCTGGCTATATCATACCCTGAGTTGCTT
TGGCGTACTGTTCTTGCTTTGGGTCCTCGGCCGGACGAAATCAACTATGA
TCGTCATGACGATATGCACCGATATGTACCTGGTCGAGGAGAGACGTCTA
CAATGCCTGCCAGGCCACTATGATACTACAGCAGTATTTTTACCAAAAAC
ATGCCCTCAATATTTCCGACTACTCTCTCGTTGGCCGGAGAAACGCCGCT
GATTTCGTGCCTACCAGAAGTACGAACGAGGGTAAGAGGATTCTCCTGGT
CTCGCATCTGGCCAAGCGGACCAGCTAAATCCGATGCTAGACGCTAAAAA
TTGCCCTTGAAGAAAGCGTCATGGGTTTTCTGAAAAAAACTCTTCAGACA
CGAGAACTTCACGAAATAACACATGACATACTGTAGAAAGGTTGGAGTGG
GTACTACAGGTACTAAAGTACCGTGTATTTTACAATTTTTCAACGTGGTG
AATAACCGGATCAGGGACAGGCCCATCGAGCCACAGCGTTAGTCAACAAC
TAAATAACCGTGTTGAGATAATGAAATGGATTATATATATATACTCCGGA
GTAGATGTAGATATAGATATAAATATAGATATAGATACAAATATAGATAT
GGATACATAGACATTTAGCATTTCGGAATATCATGTTCTAACATGAATCC
TACGCACGAATATCTGTGCCGTCAGTTGTCGGTAAGATTCGAGTCCGGAC
GTTGGTTCACGTTATCCCGCTCTCACAACGCCTCCTCGCACTTGAAACAT
GAGAGATTAACCTACCTCAGCGACGAAGGCTAAGACTAAGACTACATTAC
CTGCCTGTGTGTAGAGTGGTATGTGTCCTGCGTTCATCTACCGCAGAGTA
TAATGCGGTGCTCAATGTATATGGAACAGAATGGAGCGTTTCAGCACACC
TCGCCCCGTTCCTGCTGAACACCTGTGTCGTACAATACCCAATACATACT
GTATGCTATGTATACATGACTGTATATTTTCTATAGGATCCCGAAGACGA
GGCGACCCAGAGGCGCCAGGCGGAAGAAAAGCGTGTCCTGAAGAACTTCA
AGGAGACCAACATGTCCTGCGCCCACGACCGATCGGCGGTAAGATTCCGG
TCCAAAGTTGCAGAGAAACGGTAACGCTTGTGCCGAAAAGCTCAGGAACG
CCACCGTACCTACAGTAAAACAAGTCCTGTTGGTAGTACTGTTAGTAGTA
CTGATGGTAGTACCGATAGCAGTATTACTTCTAGTACTGTTCGTACTACT
GTTAGTAGTACTAATTGTCGTGTTGTAGGATGGGAATCGCGGTAGTGTCG
AAGCAGCGACGCTTTCCAAATGCGAACAACCTGCGACTATATTTATTAGC
CCTCCGCGTCATGTCGCTGACTTGTGTTCGGCGTTGTAAAAAGATGGCGG
CGTTGTTTAACGACCCCCCGACCGCTCGATTTTCTATTTTGCCTCTTGTG
GAGTTTTCCATTTCAGTACCAAGTACAGCGCCACGGTGGTGTGATTCATG
GACAGAAATAAAGCATCAGTAAAGTAAAGATAGTACTAGTATTAGACAAG
GGATGGAATATTATTATGCAACAATAGTCAGTCGGTAAGAGTAGCCATTG
ATATTCTCATTGCTAAGAGTAAAAAGACAACAACTCTCGATTGTGATGTA
TGTACATATCTCCTGTACTCTCCACAAAAGAGTAACAAAATTGAGGTAGG
TTCTTGTAGCTGGGCACGCACGTAGGACAGACATACTCCGATGCATATTG
TGTCCGTTTGATCGCAACAACAACGTAGAGCAGAAAAGAGCACCTCTTCT
GTGGTTCCTTGTAGAGTAGAATGATGGTTATCAGTATATTTGTGTGTGTG
TGTGTGTGTGCGTCTTCTTCCAAAGTCAAGACCGACCTGAACCCGACTCC
GTTATCGAGGGGTTGATGAAACTGTGGCCTCGTCGGCTCCTATTTGATAC
TCTCGCGACAGCATCGTCCTAACAATATCAGTTCAGCATTATTGGTTCCA
AGATATTAGAACCTCGTCACCCTTGTTGTGGTTGTTCGGGGGAGGAGGGG
GGTTACGGTGTGTTTCTCGTCATCCGAGCCCCGGATCCCGTTCGCGGCGG
GGGAGAGGGGGATAGGCGGTTGGCCCGAGGGTTGGCACACGAAGCGAGCT
TGAAGGTGATCTCGCAGCAAAACAGTCTGCTACTGTATGCCGTATGCTGT
TATGATGTCATGCTGCCGTCGTTGCCTTGTTTCGCCTGATGGGATGAGTT
TTGGATGATTTTTGGATTACTTTTGGCCCCGTCTCGCTATCGATAGGAGA
GGAAGCTGATGGAGATGGCCCTCGAGGACAAGATCGCGGCGTGCCGAGAG
TTCCGGCACAAAGGAAATCTTTTTCACGGGGAGGGGCAGTACCGACGAGC
CGCCTTGCAGTACCGACAGGTGGCACACTCTCTTGTTAGCGTACAAAGCA
ATATACCTGATTTACTCACAAACTCTCGTGGTATACCTTAAGCTACCCTC
GGCCATGGGCAGATTAGTAACGCAGGTAGTATGGCATAGTTAGTATGGCA
TACTTGTAGTACTGTTTGTGCTACTCAAAGGTTTGGTTCCTACTTTTTTA
TTGGGTACTCAATTCACTGCGAAATTTTTCGGACTGGCCGTAGTAGGTGT
GCTTGACTATTTTCTATTATTAATGGTATATATTTACAGTGTTTCCTACT
TTTACCGAAGACTTGAGCGGACTGCGCAACATCGTATACTGTATACTAAA
TCACTGGGCTGCAGAGGAAGTGGAGGTAACAAAACGTCGGTTTCATAAGA
TACGCCTCGTCGTGTTGAAACCCGACGTGACTATCCAAACCGTGTGTGGG
AGACGAAGAAACATGTTATTTATATCATACCTGGTAGGTATAAAGGTAGA
GGTATAGTCTAGGTATGACAGTGCTCCTGGGAAGAAAAGCGAACGTACAA
CAGCGCAAGGGACGTCCGGTAGTGACTGTATTAACAAGGTCATTATTATA
GGATCAGTAGTATGGCTTTTAAGAGTTGAAAGTAGCAAGTACGAAGCATC
CTATAATATTACATAATAATATTTTGTAATATTGAAGACACACCCTATTG
TAACTTGAGTGTTGATCATGATGGGGTATTGCGGAACTCGGGAGGAATCC
CGTAAGTAAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGACTGACG
CGGGGCGGGACTGCCGAAACCGTCTCGCGACACCAAATTCTCAGGCGCGA
ACGGGGACAGGGAAATATCCATTTTCTCTGTTGAGCTGACCACGAGCAGG
ACTGGCAGCCTTACCCGGTTGACCCTTACTCTTGCTATGTCTTTTGCCAT
ACATACATACATACATAAAGGCAATTTGTACCTGGTAGACATGGGGTATA
AAGGCAGTTTTCGCTTGAAACCGTTTAGTACTCGGGTGCAAATTTTGGCT
AACTTTTGTCAAGTAAAAAACACACACGCCGTTGTCGTAACAAGCATCAT
TGATCCCTTAGTACCCCCTTGTGAAGATCAATGCGAGTGGCATAGAATGA
CTAGGATGACAGGGCCGGATTGCGCGGTTGTGTGCAATTTAATAAATATA
CACACACACACAAACACACACACACACACACACACACACACACACACACA
CACACACCCTCCTCCCCGAAAGGGTAAGCCGGAATCCCGCAACAGAAGAC
AACCGTTGTAGTTGCAGTATTATCCTCCCGGGTGGCCTGTAGCCACCCGG
GAGGTCGGGAGGGACCGGCCTGTAGCCGCCTCGCCTTTCTCTGGGGTACG
AACCTACGTTTCGGATGTGTGGCTCTGCTGGGGCTTTATGGGCTACTGAC
ACAGCTTTTTGAACAGGGCTCGGTGAGTTCGAACGAGCCCCGCCCACTTG
GGACAGCAACGAACCAGCAAGCATGGCGGAGCGAGAGGGCAGAGCTAGAA
GCTGGGCTGCTAGTGACGGAACTGCTAGTGGCGGAAAGGTGGGGCTTGGC
GACAACCCATCTCGACAGCTCGACTCCCATCATCGAAGACCTGGGTATGA
CTCCTGCTGAATTTTTTCGTTTTGTACCGATTTACGATTGTGTGGAATTT
TTTCGTTTCGTACTGAATTACGATCGTGTGGGCTGGGGGAGGCGTAGCTC
ACGAAGTTGTACGCTTCGGCATGCACACACGAGTACAGACCCTACTCGGC
TACCTCGTATCCGACTAGCTTTACCCTTGGCTCTCTTCTTGCCCCCACGA
TTCGCGTCCAGCGCAAAACTCATGGTTGGTGTTTCACCCCAAGCCCTATG
GCTTGTGGGGACTTTTTGCGAGACTGTGCATTTCGGGACTGTAGAGAAAG
ATTAGTTACTATTACTATACTGATGTCCCCAACTACGAGAACAGCAACGG
ACGCAAGTCACATGGACCCGGAGAGCTCTAGCTCAATATGTTGTACGTTC
CAGCGCACGCATACGAGCGCAGACCCTATTTGGATACTTCGTATCCGACT
AGCTTTAACCATGACTCCCCCACGGCCCTCAGGACTTGTGCTCAACGCAA
GACTCGTAGTTTGTATTTCACCCCGGAGCCTATGGCCTTTGGAATTTTTT
TCGTGTAACTTTATACATAGGGATGAGAGGGGAGGAGGACTAACTGGGCA
ACCGGAAAGCTCACAGGTGGACACAGCAACCATCAGAACAGTATTGAACA
CAAATCACGTGGATTTGAGAAGTTTTAGCTCAAAATGTTGGGCGTTACGG
CGCACACATAAGAGTGCAGACCCTATTCGGCTACTGTGTATCCGACTAGC
TTCACCCTTGACTCTCACCTTGCCCTCAGGATTTGTGGCCAACGCAAGAT
TTCTGGTTTGTGTTTCACCCCGGGCCCTATGGCTTGCGGGGGATTTTTCG
TATGACTGTATGTTTGGGGACGAGAAGGGAGGAGGACTTTTGGGCAACCC
ATGGGCACGCAGGTGGACACTGCAGCCATTAGAACAGTATTGAGCACAAA
TTGCGTGGATTTGAGAAGTTTTAGCTCAATATGTTGGACGCTCCGGCGTA
CACATAAGAGCGCAGACCCTATTCGGCTACCGTGTATCCGACTAGCTTCA
CCCCTGACTCTCACCTTGCCCTCAGGATTTGTGGCCAACGCAAGACTTCT
GGTTTGTGTTTCACCCCGGGCCCTATGGCTTGCGGGGATTTTTCGTATGA
CAGTATGTTTGGGGACGAGAGGAGGAGGACTTTCTGGGCAACCCGTGGGC
CCACAGGTGGACATTGCAACCATTAGAACAGTATTGAGCACAAATCGCGT
GGATTCGAGAAGTTTTAGCTCAATATGTTGGGCGTTCCGGCGCACACATA
AGAGCGCAGACCCTATTCGGCTACTGTGTATCCGACTAGCTTCACCCTTG
ACTCTCTCGTTGCCCTCAGGATTTGTGCCTAGTGTAAGACTTCTGGTTTG
TGTTTCACCCCGGGCCCTATGGCATGCAGGGATTTTTCGTATGACTGTAT
GTTTGGGGACGAGAAGGGAGGAGGACTTTTGGGCAACCCATGGGCACGCA
GGTGGACACTGCAGCCATTAGAACAGTATTGAGCACAAATTGTGTGGATT
TGAGAAGTTTTAGCTCAATATGTTGGACGCTCCGGCGTACACATAAGAGC
GCAGACCCTATTCGGCTACCGTGTATCCGACTAGCTTCACCCTTAACTCT
CCTTGCCCTCAGGATTTGTGCCTAGTGTAAGACTTCTGGTTTGTGTTTCA
CCCCGGGCTCTATGGCATGCAGGGGATTTTTCGTATGACTGTATGTTTCG
GTACGAGAGGGGAGGAGGATTTACTGGGCAACCGGTGAGCCCACAGGTGG
ATGCAGCGACCATTAGAACAGCACTGAGCACAAATTGCGTGGGTTCGAGA
AGCTTTAGCTCAATATGTTGGGCGTTCCGGCGTACACATACGAGCGCAGA
CCCTATTCGGCTACTATGTACCCGACTAGCTTCACCCTTGACTCTCTCCT
TGCCCTCAGGATTGGTGCCCAGTGCAAGACTTATGGTTTGTGTTCCACCC
CGGGCTCTACGGCTTGCGGGGGATTTTGTTACGTGGAAGGAAAATATGTA
CGGGTATAATCGGGACACGCACCGTTTGGGTGCTGAAAGGGGAAGGGGCA
GAATGATAACACCACCGCTGCGGTACGCGGCACGGTTGGATGGGGGGGCG
AGAAGTAACCCCCAGGTGGGTTACATGCAGTAGCATAGAATGAGTAGACT
ACATGGCCGGATTGCGCGGTTAGGTGCAATTTAATAAATACACACACACA
CACACACACACACACACACACAGGAAGCGCAAGGCACTCAGGGCTTAAAG
AAAAGCTGTACGAGTAGAGAGAGTGCGTCCCATTTGTCGCGTCTCATCAC
AGGTTGTCGCAACAAGTATCATTGATCCCTCCTTGGGAGGATCAATGCGA
TTGGCATAGAATGACTACTAGGGTGACAGGACAGTATTAGTACCAACAGT
ATGAAAATGTTTCCCGAGAACACAGTGGAGGGGGGTGTTGAACCTATACT
TACATACTATTAATAGGTTGAAAGAGATGACATTCGAGCTACTGTTAGAG
CTATTGCTATAGTCAAAGCCCTTTTCCCATAACGTAATTCAAAGGTAAGA
TAGAGAATGTTGGTCGCGGCAACCCTCCGCACGGGAGCGTTTCAAAACGA
CAGATTTGAAACAGTAATAACTCAGGTGCAAATCACGCCCCCTACTTATT
AAAACCGCTTCCTTTCTGTGGAACCCCCCTACCCCGCTCCCCACTCTTTG
GATGCTTTGTATCGGTGTACCAGTACGAATTGTTCGACCTAGTGGAACAA
CGAGGTGTATCATACGGGATAGTATAGTTTTCTGAATCATGGTCTCGACC
TACAGCCGTCCCCGACACCCCCTGCCCTCGTAGACGTTCCCTGCCTTGTA
GAGACTTGACTTTTTTTTTCTGTCCCGCTACACCCTTAATAATAGTTTGG
GTTTGTATTGGGTTAGCGTTATCCCGCCGGGATGGGTGTGCTATACTAGC
GGAACTGCACACAGTCATCATGTAGTTGTAGATATTTTCGATAAAAACGT
TGGAAACATGCCACCGTGTAATCCCCAGGCGCTGATCTACTACGACTTCT
GCTTCCCCGAGAAAGATTCCGAGCAAAAGGAGTTGGATGAGATTCGGCAG
GCTTGTCTGCTGAATTCCGCGGCGTGC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1144:91581..104607+ >mRNA_F-serratus_M_contig1144.1235.1 ID=mRNA_F-serratus_M_contig1144.1235.1|Name=mRNA_F-serratus_M_contig1144.1235.1|organism=Fucus serratus male|type=CDS|length=774bp|location=Sequence derived from alignment at F-serratus_M_contig1144:91581..104607+ (Fucus serratus male) ATGCAGCATCTGAGCAAAAGTCGTTGCTGGACGGACAATTACGAGCGATG GGATGCGTGGCAGATGCAGCATCTGAGCAAAAGTCGTTGCTGGACGGACA ATTACGAGCGATGGGATGCGTGGCAGGATCCCGAAGACGAGGCGACCCAG AGGCGCCAGGCGGAAGAAAAGCGTGTCCTGAAGAACTTCAAGGAGACCAA CATGTCCTGCGCCCACGACCGATCGGCGGATCCCGAAGACGAGGCGACCC AGAGGCGCCAGGCGGAAGAAAAGCGTGTCCTGAAGAACTTCAAGGAGACC AACATGTCCTGCGCCCACGACCGATCGGCGGAGAGGAAGCTGATGGAGAT GGCCCTCGAGGACAAGATCGCGGCGTGCCGAGAGTTCCGGCACAAAGGAA ATCTTTTTCACGGGGAGGGGCAGTACCGACGAGCCGCCTTGCAGTACCGA CAGGAGAGGAAGCTGATGGAGATGGCCCTCGAGGACAAGATCGCGGCGTG CCGAGAGTTCCGGCACAAAGGAAATCTTTTTCACGGGGAGGGGCAGTACC GACGAGCCGCCTTGCAGTACCGACAGGCGCTGATCTACTACGACTTCTGC TTCCCCGAGAAAGATTCCGAGCAAAAGGAGTTGGATGAGATTCGGCAGGC TTGTCTGCTGAATTCCGCGGCGTGCGCGCTGATCTACTACGACTTCTGCT TCCCCGAGAAAGATTCCGAGCAAAAGGAGTTGGATGAGATTCGGCAGGCT TGTCTGCTGAATTCCGCGGCGTGC back to top
|