mRNA_F-serratus_M_contig1139.1205.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1139.1205.1
Unique NamemRNA_F-serratus_M_contig1139.1205.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1139.1205.1 vs. uniprot
Match: D8LNT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT9_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 6.320e-118
Identity = 195/240 (81.25%), Postives = 211/240 (87.92%), Query Frame = 1 
Query:    1 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNKVWDKRMADFEHHAEDMVFAMRGRHGNELHGFQRNFLQAQPRPKFSCELLDLRRIQEHLAKAKHYAEAHEIKLKADALEAWEMERWRNRRQIDFCQRESQFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRTERYQTSSLFGRGLIAPPSAGSGRSRVESSGDGPGESRGGRRS 720
            KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFN VWDKRMAD+EHHAEDMVFAMR RHG EL  +QR  LQAQPRPKFS ELLDLRRIQEHLAKAK YAEAH++KLK+DALEAWE+E+WRN+RQ D CQRES+FKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIR ER Q+SS+   G ++ PS     + V+ S  G G +RGGRRS
Sbjct:   36 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGAELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAER-QSSSM---GRVSAPSVHKKATTVKHSATGGGGARGGRRS 271
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BLAST of mRNA_F-serratus_M_contig1139.1205.1 vs. uniprot
Match: A0A6V1QLJ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QLJ6_HETAK)

HSP 1 Score: 277 bits (709), Expect = 1.760e-90
Identity = 148/206 (71.84%), Postives = 171/206 (83.01%), Query Frame = 1 
Query:    1 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNKVWDKRMADFEHHAEDMVFAMRGRHGNELHGFQRNFLQAQPRPKFSCELLDLRRIQEHLAKAKHYAEAHEIKLKADALEAWEMERWRNRRQIDFCQRESQFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRTERYQTSSL 618
            KNRL+ELK+HEENRRKEAMRSRQIAERLGVEEAHMLEFQQFN VWD++M ++E HA+D++ +M+ RH  EL  FQ+  L  QPRPKFS ELLDLRRIQEHLAK K Y EAH+IKLK+DALEAWE+E+WRN++Q +  QRE++FKHG    + AL +RV  GREEQKKQRQMDLERLLQRYQNVKSELEAQQ LERIR ER     L
Sbjct:   60 KNRLEELKMHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNMVWDRKMENYEQHAQDLILSMKERHAAELRQFQQKLLDNQPRPKFSRELLDLRRIQEHLAKGKDYQEAHKIKLKSDALEAWEVEKWRNQKQQEMLQREAKFKHGXXXXLIALQKRVQTGREEQKKQRQMDLERLLQRYQNVKSELEAQQNLERIRAERMSAMGL 265
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BLAST of mRNA_F-serratus_M_contig1139.1205.1 vs. uniprot
Match: A0A835Z9H7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9H7_9STRA)

HSP 1 Score: 273 bits (699), Expect = 1.820e-89
Identity = 151/200 (75.50%), Postives = 168/200 (84.00%), Query Frame = 1 
Query:    1 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNKVWDKRMADFEHHAEDMVFAMRGRHGNELHGFQRNFLQAQPRPKFSCELLDLRRIQEHLAKAKHYAEAHEIKLKADALEAWEMERWRNRRQIDFCQRESQFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRTER 600
            KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFN VWD++M+D+E  AE+MV AM  RH  EL  +Q+  L  Q RPK+S ELLDLRRIQEHLA+AK YAEAH +KLK+DALEAWE+ERWR +RQ +  QRE +FK GKA EM ALL+RV  GREEQKKQRQ DLERLLQRYQNVK ELEAQQ LER+R ER
Sbjct:   37 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNMVWDRKMSDYEARAEEMVAAMLERHEEELREYQQRLLTTQSRPKYSRELLDLRRIQEHLARAKDYAEAHRMKLKSDALEAWELERWRTKRQGEMLQREQKFKQGKATEMQALLKRVQMGREEQKKQRQGDLERLLQRYQNVKMELEAQQNLERMRVER 236
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BLAST of mRNA_F-serratus_M_contig1139.1205.1 vs. uniprot
Match: A0A7S2UZK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZK5_9STRA)

HSP 1 Score: 270 bits (691), Expect = 2.880e-88
Identity = 144/206 (69.90%), Postives = 175/206 (84.95%), Query Frame = 1 
Query:    1 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNKVWDKRMADFEHHAEDMVFAMRGRHGNELHGFQRNFLQAQPRPKFSCELLDLRRIQEHLAKAKHYAEAHEIKLKADALEAWEMERWRNRRQIDFCQRESQFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRTERYQTSSL 618
            KNRL+ELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFN VWD++M ++EHHA+++V AM+ RH  EL  FQRN L+ Q RPKFS ELLDLR+IQEHLA++K Y EAH+IKLK+DALEAWE+E+W+++++ +  Q+E+     K QE+ AL +R+  GREEQKKQRQMDLERLLQRYQNVKSELEAQQ LERIR+ER+   +L
Sbjct:   36 KNRLEELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNMVWDRKMEEYEHHAQELVRAMKERHMAELREFQRNLLERQQRPKFSRELLDLRKIQEHLARSKDYQEAHKIKLKSDALEAWELEKWKSQKEQEMLQKEAXXXXXKQQELIALQKRIQTGREEQKKQRQMDLERLLQRYQNVKSELEAQQNLERIRSERHSALTL 241
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BLAST of mRNA_F-serratus_M_contig1139.1205.1 vs. uniprot
Match: A0A7S3HDC8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDC8_9STRA)

HSP 1 Score: 261 bits (666), Expect = 2.750e-84
Identity = 141/204 (69.12%), Postives = 169/204 (82.84%), Query Frame = 1 
Query:    1 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNKVWDKRMADFEHHAEDMVFAMRGRHGNELHGFQRNFLQAQPRPKFSCELLDLRRIQEHLAKAKHYAEAHEIKLKADALEAWEMERWRNRRQIDFCQRESQFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRTERYQTS 612
            KNRLDELKLHEENRR+EAMRSRQIAERLGVEEAHMLEFQQFN +WD++M ++E HAE++V AM+ RH  EL  +QR  +  Q RPKFS +LL+LR+IQE LAK K YAEAH+IKLK+DALEAWE+E+W + RQ D  Q+E++FK  K QE+ AL +R+ +GREEQKKQR MDLERLLQRYQNVK+ELEAQQ LERIR E+   S
Sbjct:   36 KNRLDELKLHEENRRREAMRSRQIAERLGVEEAHMLEFQQFNLIWDRKMTEYETHAEELVEAMKERHAAELRDYQRKLMGKQLRPKFSKDLLNLRKIQETLAKQKDYAEAHKIKLKSDALEAWELEKWHSERQQDLLQKEAKFKFNKQQELLALQKRIQSGREEQKKQRHMDLERLLQRYQNVKAELEAQQNLERIRMEKLAQS 239
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BLAST of mRNA_F-serratus_M_contig1139.1205.1 vs. uniprot
Match: A0A7S2SB13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SB13_9STRA)

HSP 1 Score: 253 bits (645), Expect = 2.400e-81
Identity = 137/206 (66.50%), Postives = 166/206 (80.58%), Query Frame = 1 
Query:    1 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNKVWDKRMADFEHHAEDMVFAMRGRHGNELHGFQRNFLQAQPRPKFSCELLDLRRIQEHLAKAKHYAEAHEIKLKADALEAWEMERWRNRRQIDFCQRESQFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRTERYQTSSL 618
            KNRL+ELKLHEENRRKEAMRSRQ+AERLGVEEAHMLE+QQFN  WD++M ++E HA ++V AMR RH  EL  FQ + LQ Q RPKFS ELL+LRRIQEHLAK K Y EAH+IKLK DALEAWE+E+W+N++Q +  QRE++F       + AL +R+  GREEQKKQR++DLERLLQRY+NVK+ELEAQQ LERIR ER    ++
Sbjct:   36 KNRLEELKLHEENRRKEAMRSRQLAERLGVEEAHMLEYQQFNMDWDRKMGEYETHANELVEAMRERHKAELREFQESLLQKQQRPKFSRELLNLRRIQEHLAKQKDYTEAHKIKLKCDALEAWELEKWKNQKQQEMFQREAKFXXXXXXXLIALQKRIQTGREEQKKQRELDLERLLQRYRNVKNELEAQQNLERIRMERMTQGAM 241
[Close]
BLAST of mRNA_F-serratus_M_contig1139.1205.1 vs. uniprot
Match: A0A7S2CQS6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQS6_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.190e-79
Identity = 135/206 (65.53%), Postives = 162/206 (78.64%), Query Frame = 1 
Query:    1 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNKVWDKRMADFEHHAEDMVFAMRGRHGNELHGFQRNFLQAQPRPKFSCELLDLRRIQEHLAKAKHYAEAHEIKLKADALEAWEMERWRNRRQIDFCQRESQFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRTERYQTSSL 618
            KNRL+ELKLHEENRRKEAMRSRQ+AERLGVEEAHMLE+QQFN  WD++M ++E HA ++  AM  RH  EL  FQ N L  Q RPKFS ELL+LR IQ HLA  K Y EAH+IKLK DALEAWE+++W+  +Q +  QRE++FKH K QE+ AL +R+  GREEQKKQR++DLERLLQRY+NVK+ELEAQQ LERIR E+     L
Sbjct:   36 KNRLEELKLHEENRRKEAMRSRQLAERLGVEEAHMLEYQQFNMDWDRKMNEYEKHASELADAMTERHKAELRDFQENLLHKQQRPKFSRELLNLREIQRHLAMQKDYTEAHKIKLKCDALEAWELDKWKILKQQEMFQREAKFKHQKQQELLALRKRIQTGREEQKKQRELDLERLLQRYRNVKNELEAQQNLERIRMEKMTQGGL 241
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BLAST of mRNA_F-serratus_M_contig1139.1205.1 vs. uniprot
Match: A0A1V9ZAE8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZAE8_9STRA)

HSP 1 Score: 252 bits (644), Expect = 3.370e-78
Identity = 136/196 (69.39%), Postives = 166/196 (84.69%), Query Frame = 1 
Query:    1 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNKVWDKRMADFEHHAEDMVFAMRGRHGNELHGFQRNFLQAQPRPKFSCELLDLRRIQEHLAKAKHYAEAHEIKLKADALEAWEMERWRNRRQIDFCQRESQFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERI 588
            KNRL+ELK+HEENRRKEAMRSRQIAERLGVEEAHMLEFQQFN VWDK+M ++E + E++V  MR RH +EL  FQ+  L+ Q +PKFS ELL+LR+I+EHLA+ K YAEAH++KLKADALEAWEME+WRN +Q +  QRE +FK  + QE+ AL +R+ +GREEQKKQRQ+DLERLLQRYQNVK+EL+ QQ LERI
Sbjct:   36 KNRLEELKVHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNVVWDKKMEEYEQNIEELVLNMRDRHKSELLEFQQKLLEKQTKPKFSKELLNLRKIEEHLARQKDYAEAHKMKLKADALEAWEMEKWRNSKQQEMFQREVKFKQRQRQELDALQKRIQSGREEQKKQRQLDLERLLQRYQNVKAELQQQQNLERI 231
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BLAST of mRNA_F-serratus_M_contig1139.1205.1 vs. uniprot
Match: A0A812XSJ3_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XSJ3_SYMMI)

HSP 1 Score: 243 bits (619), Expect = 9.260e-78
Identity = 129/184 (70.11%), Postives = 153/184 (83.15%), Query Frame = 1 
Query:    1 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNKVWDKRMADFEHHAEDMVFAMRGRHGNELHGFQRNFLQAQPRPKFSCELLDLRRIQEHLAKAKHYAEAHEIKLKADALEAWEMERWRNRRQIDFCQRESQFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVK 552
            KNRL+ELKLHEENRR+EAMRSRQIAERLGVEEAHMLEFQQFN +WD++MAD+E HAE++V AM+ RH  EL  +QR  +  Q RPKFS +LL+LR+IQE LAK K YAEAH+IKLKADALEAWE+E+W ++RQ D   +E +FKH K QE+ AL +R+  GREEQKKQR  DLERLLQRYQNVK
Sbjct:   35 KNRLEELKLHEENRRREAMRSRQIAERLGVEEAHMLEFQQFNMIWDQKMADYESHAEELVEAMKERHAAELREYQRRLMTKQIRPKFSKDLLNLRKIQETLAKQKDYAEAHKIKLKADALEAWELEKWHSQRQTDLLAKEGKFKHVKQQELVALQKRIQTGREEQKKQRHQDLERLLQRYQNVK 218
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BLAST of mRNA_F-serratus_M_contig1139.1205.1 vs. uniprot
Match: F0Y536_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y536_AURAN)

HSP 1 Score: 241 bits (616), Expect = 3.050e-76
Identity = 135/204 (66.18%), Postives = 158/204 (77.45%), Query Frame = 1 
Query:    1 KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNKVWDKRMADFEHHAEDMVFAMRGRHGNELHGFQRNFLQAQPRPKFSCELLDLRRIQEHLAKAKHYAEAHEIKLKADALEAWEMERWRNRRQIDFCQRESQFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRTERYQTS 612
            KNRL+ELK+HEENRRKEAMRSRQIAERLGVEEAHMLEFQQFN +WDK+M+++E+HA D+V AM+ RH  EL  FQ   LQ Q RPKFS ELL+LRRIQEHLA+ K Y EAH+IKLK DALEAWE+E+W+N +Q +  QRE++FKH K QE+ AL +RV  GREEQKKQ              VKSELEAQQ LERIR ER  +S
Sbjct:   76 KNRLEELKMHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNIIWDKKMSEYENHAADLVEAMKERHAAELRDFQGALLQRQARPKFSRELLNLRRIQEHLARQKDYTEAHKIKLKCDALEAWELEKWQNGKQQEMFQREAKFKHQKQQELVALQKRVQTGREEQKKQXXXXXXXXXXXXXXVKSELEAQQNLERIRAERMASS 279
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1139.1205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNT9_ECTSI6.320e-11881.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1QLJ6_HETAK1.760e-9071.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z9H7_9STRA1.820e-8975.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UZK5_9STRA2.880e-8869.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3HDC8_9STRA2.750e-8469.12Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2SB13_9STRA2.400e-8166.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CQS6_9STRA1.190e-7965.53Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1V9ZAE8_9STRA3.370e-7869.39Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A812XSJ3_SYMMI9.260e-7870.11Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
F0Y536_AURAN3.050e-7666.18Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1139contigF-serratus_M_contig1139:180588..184698 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.7
Seed ortholog evalue1.1e-93
Seed eggNOG ortholog2880.D8LNT9
KEGG koko:K20929
Hectar predicted targeting categoryother localisation
EggNOG OGs28KHC@1,2QSYJ@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-08_005830.1
EC1.2.3.15
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons7
Model size745
Cds size744
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929039.081185-CDS-F-serratus_M_contig1139:180587..1806891622929039.081185-CDS-F-serratus_M_contig1139:180587..180689Fucus serratus maleCDSF-serratus_M_contig1139 180588..180689 -
1690962677.8147235-CDS-F-serratus_M_contig1139:180587..1806891690962677.8147235-CDS-F-serratus_M_contig1139:180587..180689Fucus serratus maleCDSF-serratus_M_contig1139 180588..180689 -
1622929039.091365-CDS-F-serratus_M_contig1139:180716..1808221622929039.091365-CDS-F-serratus_M_contig1139:180716..180822Fucus serratus maleCDSF-serratus_M_contig1139 180717..180822 -
1690962677.8276422-CDS-F-serratus_M_contig1139:180716..1808221690962677.8276422-CDS-F-serratus_M_contig1139:180716..180822Fucus serratus maleCDSF-serratus_M_contig1139 180717..180822 -
1622929039.2237134-CDS-F-serratus_M_contig1139:182804..1828931622929039.2237134-CDS-F-serratus_M_contig1139:182804..182893Fucus serratus maleCDSF-serratus_M_contig1139 182805..182893 -
1690962677.8373814-CDS-F-serratus_M_contig1139:182804..1828931690962677.8373814-CDS-F-serratus_M_contig1139:182804..182893Fucus serratus maleCDSF-serratus_M_contig1139 182805..182893 -
1622929039.2342453-CDS-F-serratus_M_contig1139:183503..1836561622929039.2342453-CDS-F-serratus_M_contig1139:183503..183656Fucus serratus maleCDSF-serratus_M_contig1139 183504..183656 -
1690962677.846249-CDS-F-serratus_M_contig1139:183503..1836561690962677.846249-CDS-F-serratus_M_contig1139:183503..183656Fucus serratus maleCDSF-serratus_M_contig1139 183504..183656 -
1622929039.2458088-CDS-F-serratus_M_contig1139:183900..1840021622929039.2458088-CDS-F-serratus_M_contig1139:183900..184002Fucus serratus maleCDSF-serratus_M_contig1139 183901..184002 -
1690962677.8568928-CDS-F-serratus_M_contig1139:183900..1840021690962677.8568928-CDS-F-serratus_M_contig1139:183900..184002Fucus serratus maleCDSF-serratus_M_contig1139 183901..184002 -
1622929039.2573977-CDS-F-serratus_M_contig1139:184316..1844601622929039.2573977-CDS-F-serratus_M_contig1139:184316..184460Fucus serratus maleCDSF-serratus_M_contig1139 184317..184460 -
1690962677.8665814-CDS-F-serratus_M_contig1139:184316..1844601690962677.8665814-CDS-F-serratus_M_contig1139:184316..184460Fucus serratus maleCDSF-serratus_M_contig1139 184317..184460 -
1622929039.2688346-CDS-F-serratus_M_contig1139:184650..1846981622929039.2688346-CDS-F-serratus_M_contig1139:184650..184698Fucus serratus maleCDSF-serratus_M_contig1139 184651..184698 -
1690962677.8796034-CDS-F-serratus_M_contig1139:184650..1846981690962677.8796034-CDS-F-serratus_M_contig1139:184650..184698Fucus serratus maleCDSF-serratus_M_contig1139 184651..184698 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1139.1205.1prot_F-serratus_M_contig1139.1205.1Fucus serratus malepolypeptideF-serratus_M_contig1139 180588..184698 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1139.1205.1

>prot_F-serratus_M_contig1139.1205.1 ID=prot_F-serratus_M_contig1139.1205.1|Name=mRNA_F-serratus_M_contig1139.1205.1|organism=Fucus serratus male|type=polypeptide|length=248bp
KNRLDELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNKVWDKRMA
DFEHHAEDMVFAMRGRHGNELHGFQRNFLQAQPRPKFSCELLDLRRIQEH
LAKAKHYAEAHEIKLKADALEAWEMERWRNRRQIDFCQRESQFKHGKAQE
MAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRTER
YQTSSLFGRGLIAPPSAGSGRSRVESSGDGPGESRGGRRSNASTKEP*
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mRNA from alignment at F-serratus_M_contig1139:180588..184698-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1139.1205.1 ID=mRNA_F-serratus_M_contig1139.1205.1|Name=mRNA_F-serratus_M_contig1139.1205.1|organism=Fucus serratus male|type=mRNA|length=4111bp|location=Sequence derived from alignment at F-serratus_M_contig1139:180588..184698- (Fucus serratus male)
AAAAATCGCTTGGACGAGCTGAAGCTGCACGAGGAGAACCGACGAAAGGC
GAGATCATATTGAAAATACTATTATCCGCTCTGGCTTGATCTACGTGCGA
AGCAGAGGCGATGTGTCGTCGAGTCTTTCACGGATGTATGCCTGTGATTT
GTTGCAGACCACAGGTGTGTGTCGATATCAGAATCTTGGATTTGTAGTCG
AAACGTAGATGCCAACTCTGCAGTACGTAACATCACAGGAAGCTATGCGC
TCCAGGCAGATCGCGGAGAGGCTCGGGGTGGAGGAGGCTCACATGCTAGA
GTTCCAGCAGTTCAACAAGGTTTGGGATAAAAGAATGGCGGACTTCGAGC
ACCATGCCGAAGATATGGTGTTTGCTATGCGGGTAAGTTTGAGGCACCGA
CGGCTCTCATTCCTTGTGGTGAGATTGAGTAAAAAAAACACATACAGCTT
TGACATTCAGGTAGTTCTGAGGAGTATTCAGTACCACAGATACTTCCTCC
TATCGATGGTCCACGCCCCAAAAGGAGGCCCAAGTTCCATGTTTCGCCAT
GTCAAGTATCGCGAACCAACTTTACGTGCTTTGTCGGGTCCACGCTATTG
TGGACGCAGGGCACATTTTCTTTAGGGCCATTTGCGTGCAGCAAACTACT
GTCCTCAACTCCGATGATTACCTTTGTATGTCGTGTCATTCTTCAGGGGC
GGCACGGTAACGAACTCCACGGCTTCCAGCGAAACTTTCTTCAAGCACAG
CCTCGCCCAAAGTTCAGTTGCGAGCTCTTGGACCTCCGGCGGATACAGGT
CAGACTACGGCTGTAGAGCTAACCATTCTTGTTTGCTTGCTCACGATCGT
GGTTGACTCTGCCCTAGTTTGTTTATGTGTGGTAGCTGGCTCCTGTGCTA
CACAGAGGAAACTTCAAAGCTTGCTTCGAGATCACGCGTACATTAGTCGC
AAAAGGTTTAGGCGTCAATCTGAGCTGAATGCGATACTGGATAGCCCAAA
GCCCCTAGTGTGTGGATCATGAGCGAGAGATGCTGAACGCAGGAGCACCT
AGCGAAGGCCAAACATTACGCGGAGGCGCACGAGATAAAGCTCAAGGCCG
ATGCGCTCGAGGCCTGGGAGATGGAAAGATGGAGAAATAGGAGACAGATT
GACTTCTGCCAGAGAGAGAGTCAATTTAAGCACGGCAAGGCGCAGGTGAG
GGCACGAGTTTTTGCAGCATTGACTGTTATTTCTCGGGTTCTGGCGGTTT
GAATGAATTCGGATCGAGTATACTTGCATGGAGACTCGAACGTACATAGT
AAGCGCCACAGAGACTCTGATTCGATCGCATATTTCCTTCAAGTACAACC
GTACAACAAAACATGATATGATGGGGACGGGGGGATTACGACCCGCGAGA
AAGTGAGGACTAATTGAGAAAGGATGTTGTAATGGTGCCATACGAAATGT
TGGAAAAATCGAGCAAAAGGACATGCATCCGAGTGAAACGCTAAGACGCA
TGCACACATGATGGTGTGCCTTTATGCCCTGCTTGACATGGTCACATGCA
TTTGCTGCGTTTCTAACTGTTTTGTTGGAAACTTTAACACTGCAACAGTA
TCCTGCGTACACGCGGACGTACAGGGTTTAGGTAGCAGCTAGCTAGAGTG
TGGCCATGTCTTTCCAGGAAATCGGCTTCTACTTAAAGTACATCGGAGGG
GAAATAAAAGAAACCTCACAGTCCGCTGTCCTTGACCCGACTGGAGGTCA
TGTTGCGTCCTATCCGAGGAATCGCTTATCATGACGTCTGTGCGTCGCTC
TCCAGGAAATGGCGGCTTTGCTCCAAAGGGTCATGGCCGGGCGGGAGGAG
CAGAAGAAGCAGCGACAGATGGACTTGGAGCGCTTACTTCAGAGGTAAGT
TCTAGGCCTCTTTGTCCGTCGCATCCGGTCGCGGGGGGATAACGCGTTGT
GCCCACCGAGAGTCGAAAACCGTTGGATAAAACAGAAAGAAAACGAAATA
TCCTGGAAGGACCTCTCCGTGTCCGCCCAGACTGAAACTGGAAATAAAAA
ACACTTCGTGCTCAAGTCTAACATTTCGGTCATTCCCGATCAATATATCA
ATATAAACGCCCCATCCGCACGTTAAGGCTGCTGAAAACAAAGTATGGAA
AATGATCTAAGAGCTGCAGGTTTTTGGGAGTGTTTCGGTTCGCAAAAAGC
ATGAAGTTCTTGGTTAAGGACGAAGTCTTCCCAGGGCACTTTTATTGCAT
GATGAGTGGGCTCTCATTGATTGGTCGAACTGACAGGGCATTGCCGTAAC
TGTCCAAATGTAAATATCTCCTTAAGAGTATGTGTCTGCTATAAATATAT
ACTGCTGTATTCGTACATGTATACCCGCCGGTACTTTCAATATGCCCACT
TCATACCAATAGTGGGTGTGGGGAAGAGAAGCGCATATTAATTGGTCCAT
GGTGGCCTGCCAAGGAAGCACTCGTTCGGAACTACCTTGAGGTTTACTGG
CCCTGTGCCGGCGGACTCTCGGCAGTGGACGCCATCGGTACGCAATTGCG
TGACCCGATAAACTCGGGACTGACTCGATGGCGTATGGCGGTTTTATATA
AATAAATGAACGCCGCCGTGGAACTCGGGAGGAATTCCATAACTAAGCAC
CATAATCAGCCTGGGTATTATGGAGATGAGCAGGCTGACGCGGGACGGGA
CTGCCAAACCCGTCTCGCGAGACTGAATTCTCAGGCGCGAAGGCGGACAG
TGGGACATTATTTTTCCTTGTTGAGCTGACCACGTGCAGGATTAGCAGCC
TTACCCGGTTGATCCATACTCTGCTACATGTGTGACCATAATGCATACTT
ATGATGCTCGGTATATGTACTGCTGCTGTGACAACGAACACAGATACATA
CGTAAAGGGTTTTATCTTTCCCAGCGGATTAAAAAGGCTTCCTGGCGCCG
CCTTGGACGCAGCGTCATTATATACCACCGAAAAAGAAGCAAAAAATACC
CAGTTATCTTTCTGGCTTGGCCGTAATTGGTTCTCGAGTGTATTCCACTT
GTACGGTGGGCTGCAGTCGAGGCGTCCAACCAGGGTCACTGTTGCGCCGC
ACAAGCCTTCAAATCCTAGAAAATAAATTATTTTTCCGTCACAGCGCAGT
TTTATGTGCTAATTCCAGCGGTAACATCTACCTAACTCTCACATACGACG
CTGCCTGTAATTTGGTGAGCTGGGAGGCTTCGTGTGGCATGGGTGAATTG
CGTTTGAGCGGCTGATACAGGCTTTGGTGCACATCCGATGAGCAAACACC
GCGACCGCCGTCCTCAATACAAACTCAATGGTTTCGGACACGGCACCATC
TAAACTCTTTCATCATTCTCTTGGCTCTAAGAATTGTAAAAGTCGCGTTG
TCCCAGCACTCAAGCACTCAGCTAAGATCAGAAGGGCAGGGTCTCCTTCC
GTCTCTGCATCGATAGCGGACCGCCCTATAAAAAGTGGTGACGCACGATA
CCGAGTAAATCTAAGCGACGACAATTGCACACTACACAGTGTACGAAAAG
ACATGAGACCTTCAACGAAGTCCATGTCTCTCAATGGGGAACACTTTCGT
ATCTGGCGGTTCCGCCATCTCGTCTCGTGGTCAGACTTCTTTCTGTGCTA
TCGTTGTCAAAGATCATTTCGCCTTAGACAACAGCTGCCAATGGCCCAAA
TGGCGCCATTTCATTGACGCAGACATTCCACCGCGTTTTGTTTTGTATTT
TTAACAACCGTCGATTTTTTGTGGACTACAAAGCAAAAAGCGGGGATCGG
GAAATAGTGCTGCGTACTTTAGCCTTAAGAACCACTCATGCAGCTCACAC
ACATACGATGGATCACATCTTTCCAGGTATCAGAATGTCAAGTCGGAGCT
TGAGGCCCAACAAAAACTGGAGCGGATTCGCACGGAACGATACCAAACAT
CTTCATTGTTTGGGCGCGGATTGATCGCACCAGTGCGAAGAAAGGTCGCC
GGCGGCAAGCCATCGGCAGGCAGTGGTAGAAGCAGGGTCGAGAGTAGTGG
AGACGGACCGGGCGAGAGTAGGGGGGGCAGGCGATCTAACGCGAGCACCA
AAGAGCCGTAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1139:180588..184698-

>mRNA_F-serratus_M_contig1139.1205.1 ID=mRNA_F-serratus_M_contig1139.1205.1|Name=mRNA_F-serratus_M_contig1139.1205.1|organism=Fucus serratus male|type=CDS|length=1488bp|location=Sequence derived from alignment at F-serratus_M_contig1139:180588..184698- (Fucus serratus male)
AAAAATCGCTTGGACGAGCTGAAGCTGCACGAGGAGAACCGACGAAAGAA
AAATCGCTTGGACGAGCTGAAGCTGCACGAGGAGAACCGACGAAAGGAAG
CTATGCGCTCCAGGCAGATCGCGGAGAGGCTCGGGGTGGAGGAGGCTCAC
ATGCTAGAGTTCCAGCAGTTCAACAAGGTTTGGGATAAAAGAATGGCGGA
CTTCGAGCACCATGCCGAAGATATGGTGTTTGCTATGCGGGAAGCTATGC
GCTCCAGGCAGATCGCGGAGAGGCTCGGGGTGGAGGAGGCTCACATGCTA
GAGTTCCAGCAGTTCAACAAGGTTTGGGATAAAAGAATGGCGGACTTCGA
GCACCATGCCGAAGATATGGTGTTTGCTATGCGGGGGCGGCACGGTAACG
AACTCCACGGCTTCCAGCGAAACTTTCTTCAAGCACAGCCTCGCCCAAAG
TTCAGTTGCGAGCTCTTGGACCTCCGGCGGATACAGGGGCGGCACGGTAA
CGAACTCCACGGCTTCCAGCGAAACTTTCTTCAAGCACAGCCTCGCCCAA
AGTTCAGTTGCGAGCTCTTGGACCTCCGGCGGATACAGGAGCACCTAGCG
AAGGCCAAACATTACGCGGAGGCGCACGAGATAAAGCTCAAGGCCGATGC
GCTCGAGGCCTGGGAGATGGAAAGATGGAGAAATAGGAGACAGATTGACT
TCTGCCAGAGAGAGAGTCAATTTAAGCACGGCAAGGCGCAGGAGCACCTA
GCGAAGGCCAAACATTACGCGGAGGCGCACGAGATAAAGCTCAAGGCCGA
TGCGCTCGAGGCCTGGGAGATGGAAAGATGGAGAAATAGGAGACAGATTG
ACTTCTGCCAGAGAGAGAGTCAATTTAAGCACGGCAAGGCGCAGGAAATG
GCGGCTTTGCTCCAAAGGGTCATGGCCGGGCGGGAGGAGCAGAAGAAGCA
GCGACAGATGGACTTGGAGCGCTTACTTCAGAGGAAATGGCGGCTTTGCT
CCAAAGGGTCATGGCCGGGCGGGAGGAGCAGAAGAAGCAGCGACAGATGG
ACTTGGAGCGCTTACTTCAGAGGTATCAGAATGTCAAGTCGGAGCTTGAG
GCCCAACAAAAACTGGAGCGGATTCGCACGGAACGATACCAAACATCTTC
ATTGTTTGGGCGCGGATTGATCGCACCAGTATCAGAATGTCAAGTCGGAG
CTTGAGGCCCAACAAAAACTGGAGCGGATTCGCACGGAACGATACCAAAC
ATCTTCATTGTTTGGGCGCGGATTGATCGCACCACCATCGGCAGGCAGTG
GTAGAAGCAGGGTCGAGAGTAGTGGAGACGGACCGGGCGAGAGTAGGGGG
GGCAGGCGATCTAACGCGAGCACCAAAGAGCCGTAACCATCGGCAGGCAG
TGGTAGAAGCAGGGTCGAGAGTAGTGGAGACGGACCGGGCGAGAGTAGGG
GGGGCAGGCGATCTAACGCGAGCACCAAAGAGCCGTAA
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