mRNA_F-serratus_M_contig113.1159.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig113.1159.1
Unique NamemRNA_F-serratus_M_contig113.1159.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig113.1159.1 vs. uniprot
Match: D8LJ35_ECTSI (Polyketide Synthase III n=3 Tax=Phaeophyceae TaxID=2870 RepID=D8LJ35_ECTSI)

HSP 1 Score: 766 bits (1978), Expect = 2.090e-272
Identity = 376/415 (90.60%), Postives = 399/415 (96.14%), Query Frame = 2
Query:   80 MSPAVVDMLADPSVQIGLACIVLSLLFVVLQSYRKAKDEQTVYPVIAGMAIGNPQYRCTQDQALAIAQKCPGVASVKPVLERIYGNSRIGSRYFAVPDFTPNQAAKGDEMFFPADGSYEVPVDTRLDKFKEKAVPLVSDVARRAIKEAGIDVADVSKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDFVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGIKKSEAPKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHNLGRDDVDFWCVHPGGRRIIEEAQNGLGLTEEQTADSWAVLAEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYKTGMAFSFSPGVGAEGILLKQL 1324
            MS A V MLADP+VQI LAC+V+SL FVVLQS +K+KDEQTVYPVIAGMAIGNPQYRCTQ++ALA+A KCPG+ S+KPVLERIYGNSRIGSRYFAVPDFTP +AAKGD +F+PADGSY+VPVD RLDKFKEKAVPLVSDVARRAIKEAG++V D+SKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNAND+VTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKG +KSE PKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKH LGRDDVDFWCVHPGGRRIIEEAQNGLGL+EEQTADSWAVL EYGNMLSPSVMFVLSRVFKRHNAALAQGKPGY+TGMAFSFSPGVGAEGILL+Q+
Sbjct:    1 MSSAAVAMLADPTVQIALACLVVSL-FVVLQSVKKSKDEQTVYPVIAGMAIGNPQYRCTQNEALAVASKCPGLESIKPVLERIYGNSRIGSRYFAVPDFTPGRAAKGDPLFYPADGSYQVPVDVRLDKFKEKAVPLVSDVARRAIKEAGLNVEDISKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDYVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGARKSECPKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHKLGRDDVDFWCVHPGGRRIIEEAQNGLGLSEEQTADSWAVLGEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLRQI 414          
BLAST of mRNA_F-serratus_M_contig113.1159.1 vs. uniprot
Match: A0A7S2V1U6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U6_9STRA)

HSP 1 Score: 604 bits (1558), Expect = 4.000e-208
Identity = 295/405 (72.84%), Postives = 346/405 (85.43%), Query Frame = 2
Query:  110 DPSVQIGLACIVLSLLFVVLQSYRKAKDEQTVYPVIAGMAIGNPQYRCTQDQALAIAQKCPGVASVKPVLERIYGNSRIGSRYFAVPDFTPNQAAKGDEMFFPADGSYEVPVDTRLDKFKEKAVPLVSDVARRAIKEAGIDVADVSKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDFVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGIKKSEAPKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHNLGRDDVDFWCVHPGGRRIIEEAQNGLGLTEEQTADSWAVLAEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYKTGMAFSFSPGVGAEGILLKQL 1324
            DP + + +A +V ++ FV+++S   +  E+  YPVI GMA GNP Y+CTQ +ALA+AQK PG+  V+ VL RIYGNSRIG+R+FAVPDFTP++A  GDEMFFPAD S++VPV+TRL KFKE AVPLV+ +AR AI+ A + ++D+ KLVVVSSTGFLGPGLDCELI  LGL RSVDR+LIGFMGCAAAMNGFR AND+  AN GKYAL++CVE+SSVHTTFDD+IND+ILHAIFADGCAAAVL G  K   PKGTLAIVD+HAWLMEGTEDGITL+I  NGI+CTLSK+LPQYIAKN+A + DGFL KH + R ++DFW VHPGGRRIIEEAQNGLGLTEEQT+DSWAVL ++GNMLSPSVMFVL RVFKRHNAALAQGK GY+ G+AFSFSPGVGAEGILLKQL
Sbjct:   52 DP-ITLAVAVVVAAITFVLMKS--SSSGEKKRYPVIIGMATGNPPYKCTQQEALAVAQKVPGIEKVQAVLPRIYGNSRIGTRHFAVPDFTPDRALPGDEMFFPADHSFKVPVETRLAKFKEVAVPLVTRIAREAIENANVAISDIHKLVVVSSTGFLGPGLDCELINQLGLARSVDRSLIGFMGCAAAMNGFRIANDYCKANAGKYALLVCVEISSVHTTFDDDINDSILHAIFADGCAAAVLSGETKDSIPKGTLAIVDDHAWLMEGTEDGITLSINENGISCTLSKYLPQYIAKNMAGYVDGFLGKHGIKRSEIDFWSVHPGGRRIIEEAQNGLGLTEEQTSDSWAVLDQFGNMLSPSVMFVLERVFKRHNAALAQGKKGYRQGLAFSFSPGVGAEGILLKQL 453          
BLAST of mRNA_F-serratus_M_contig113.1159.1 vs. uniprot
Match: A0A836CMD8_9STRA (Polyketide synthase III n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD8_9STRA)

HSP 1 Score: 576 bits (1484), Expect = 3.170e-197
Identity = 294/405 (72.59%), Postives = 328/405 (80.99%), Query Frame = 2
Query:   89 AVVDMLAD---PSVQIGLACIVLSLLFVVLQSYRKAKDEQTVYPVIAGMAIGNPQYRCTQDQALAIAQKCPGVASVKPVLERIYGNSRIGSRYFAVPDFTPNQAAKGDEMFFPADGSYEVPVDTRLDKFKEKAVPLVSDVARRAIKEAGIDVADVSKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDFVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGIKKSEAPKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHNLGRDDVDFWCVHPGGRRIIEEAQNGLGLTEEQTADSWAVLAEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYKTGMAFSFSPGV 1294
            AV+  LA    P V      +VL+LL V     R  K E+T+YPVI G+A GNP YRCTQ QALAIAQK PG  SVKPVLERIYGNSRI SRYFAVPDFTP+ A+  D +F+PADGS++VPV  RLDKF+E AVPLV  VARRAI EAG+   D+ KLVVVSSTGFLGPGLDCE+IK L + RSVDR+LIGFMGCAAAMNGFR AND+V  +PGK+ALM+CVELSSVHTTF+DNINDAILHAIFADGCAA VL G   S A KGTLAIVD+HA LMEGTEDGITL I PNGI+CTLSK LP YIAK++  + D +L+KH L R DVDFW VHPGGRRIIEEAQNGLGLTE+QTADSWAVL EYGNMLSPSVM+VLSRVF RH AALA GKPGY  G+AFSFSP +
Sbjct:   13 AVIAQLAGVWLPMVVASALTLVLALLVV-----RGRKREETMYPVIIGLATGNPPYRCTQKQALAIAQKVPGCESVKPVLERIYGNSRIASRYFAVPDFTPDVASPDDPLFYPADGSFQVPVSARLDKFRECAVPLVCSVARRAIMEAGLHPEDLDKLVVVSSTGFLGPGLDCEIIKRLRMKRSVDRSLIGFMGCAAAMNGFRIANDYVRCHPGKFALMLCVELSSVHTTFEDNINDAILHAIFADGCAACVLSGETASSAAKGTLAIVDDHAELMEGTEDGITLDINPNGISCTLSKHLPSYIAKHMGGYVDSWLRKHALSRGDVDFWAVHPGGRRIIEEAQNGLGLTEDQTADSWAVLNEYGNMLSPSVMYVLSRVFARHQAALAAGKPGYAMGLAFSFSPAL 412          
BLAST of mRNA_F-serratus_M_contig113.1159.1 vs. uniprot
Match: A0A6V1RDH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RDH2_HETAK)

HSP 1 Score: 541 bits (1394), Expect = 4.970e-184
Identity = 264/390 (67.69%), Postives = 311/390 (79.74%), Query Frame = 2
Query:  155 LFVVLQSYRKAKDEQTVYPVIAGMAIGNPQYRCTQDQALAIAQKCPGVASVK-PVLERIYGNSRIGSRYFAVPDFTPNQAAKGDEMFFPADGSYEVPVDTRLDKFKEKAVPLVSDVARRAIKEAGIDVADVSKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDFVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGIKKSEAPKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHNLGRDDVDFWCVHPGGRRIIEEAQNGLGLTEEQTADSWAVLAEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYKTGMAFSFSPGVGAEGILLKQ 1321
            +FV++    K   +   YPVI GMA GNP Y+ TQ++A  IA   P +   + PV+ERIYGN+RI SRYF +PDFTP +A  GD +FF  D  +  PV+ RLDKF+EKAVPLV++V R AI +AG+ + D+ KLVVVSSTGFLGPGLDCELIK+LGL+R VDR+LIGFMGCAAAMNGFR  ND+V ANPGK AL+ CVELSS HTTF+++ ND+ILHAIF DG AAAV+ G  K  A  G LAIVD+HAWLMEGTEDGITL+I  NGI+CTLSK+LPQYIAKN+A + D FL KH + R ++DFW VHPGGRRIIEEAQNGL L+EEQ ADSWAVL EYGNMLSPSVMFVLSRVFKRH A + +G+ GYK G+AFSFSPGVGAEGILLKQ
Sbjct:   21 MFVLVGLKSKKSSQSKRYPVIIGMATGNPAYKVTQEEACKIACSVPALPKDRIPVVERIYGNTRINSRYFCIPDFTPEKALPGDALFFDEDRMFRKPVEQRLDKFREKAVPLVTEVCRNAINQAGVAIDDIHKLVVVSSTGFLGPGLDCELIKSLGLSRGVDRSLIGFMGCAAAMNGFRVCNDYVKANPGKLALLCCVELSSPHTTFNNDTNDSILHAIFGDGAAAAVISGETKETAAPGALAIVDDHAWLMEGTEDGITLSINENGISCTLSKYLPQYIAKNMAGYVDSFLNKHGIKRSEIDFWSVHPGGRRIIEEAQNGLSLSEEQCADSWAVLGEYGNMLSPSVMFVLSRVFKRHQAMIRRGETGYKQGLAFSFSPGVGAEGILLKQ 410          
BLAST of mRNA_F-serratus_M_contig113.1159.1 vs. uniprot
Match: A0A7S3NPW3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPW3_9STRA)

HSP 1 Score: 533 bits (1372), Expect = 1.110e-180
Identity = 266/397 (67.00%), Postives = 315/397 (79.35%), Query Frame = 2
Query:  137 CIVLSL-LFVVLQSYRKAKDEQTVYPVIAGMAIGNPQYRCTQDQALAIAQKCPGVASVKPVLERIYGNSRIGSRYFAVPDFTPNQAAKGDEMFFPADGSYEVPVDTRLDKFKEKAVPLVSDVARRAIKEAGIDVADVSKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDFVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGIKKSEAP--KGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHNLGRDDVDFWCVHPGGRRIIEEAQNGLGLTEEQTADSWAVLAEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYKTGMAFSFSPGVGAEGILLK 1318
            C+VL+  L +VL + +  +D+  VYPVI GMA GNP YR +Q +ALAIA+ CP   S+KPVL RIYGNSRI  RY AVPDFTP QA KGDE+FFP D S+++PV+ RLD F+EKA+PLV+ V + A+++A I    + KLVVVSSTGFLGPGLDCELIK LGL+RSVDR+LIGFMGCAAAMNGFR AND+  ANPGK ALM CVE+SSVHTTFDDN+NDAILHAIFADGCAAAV+ G +K  AP  KG   I+D HA LMEGTEDGITL+I  NGI+C LSK+LPQYIAKN+  + + FL KH L + D+DFW +HPGGRRIIEEAQNGLGL+EEQ   SW VL++YGNMLSPSVMFVL  +   H   LA+G  G K G+AFSFSPGVGAEG+L+K
Sbjct:   18 CVVLATALILVLTTTKSGQDK--VYPVILGMATGNPPYRVSQQEALAIAESCPDCGSIKPVLARIYGNSRIDYRYMAVPDFTPEQAIKGDEIFFPKDKSFKMPVEKRLDMFREKAIPLVTRVCKAALEDAKIAPELIGKLVVVSSTGFLGPGLDCELIKTLGLSRSVDRSLIGFMGCAAAMNGFRVANDYAVANPGKLALMCCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISG-EKPGAPRAKGKFGIIDTHACLMEGTEDGITLSINENGISCILSKYLPQYIAKNMGGYVESFLAKHALQKSDLDFWAIHPGGRRIIEEAQNGLGLSEEQAKYSWTVLSQYGNMLSPSVMFVLELILNDHKKELAKGNRGLKQGIAFSFSPGVGAEGVLIK 411          
BLAST of mRNA_F-serratus_M_contig113.1159.1 vs. uniprot
Match: A0A8J2SDG4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDG4_9STRA)

HSP 1 Score: 531 bits (1368), Expect = 5.320e-180
Identity = 255/378 (67.46%), Postives = 300/378 (79.37%), Query Frame = 2
Query:  188 KDEQTVYPVIAGMAIGNPQYRCTQDQALAIAQKCPGVASVKPVLERIYGNSRIGSRYFAVPDFTPNQAAKGDEMFFPADGSYEVPVDTRLDKFKEKAVPLVSDVARRAIKEAGIDVADVSKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDFVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGIKKSEAP-KGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHNLGRDDVDFWCVHPGGRRIIEEAQNGLGLTEEQTADSWAVLAEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYKTGMAFSFSPGVGAEGILLK 1318
            K EQ + P I GMA GNP YR +Q+QAL +A+ CP   S+KPVL RIYGNSRI  RY AVPDFTP Q  +GD+ FF  D ++ +PV+ RLDKF+E AVPLV+DV  RA+K+AG+  +++ KLVVVSSTGFLGPGLDC LIK LGL RSVDR+LIGFMGCAAAMNGFR AND+  ++PGK ALM+CVE+SSVHTTFDDN+NDAILHAIFADGCAAAV+ G K   A  KG   IVD H WLMEGTEDGITL+I  NGI+C LSK+LPQYIAKN+  + + FL  HNL + D+DFW +HPGGRRIIEEAQNGLGL+EEQ   SW VL+ YGNMLSPSVMFVL  +   H  ALA+G+ G K G+AFSFSPGVGAEG+L+K
Sbjct:   39 KKEQKLIPTIMGMATGNPPYRASQEQALQVAESCPECTSIKPVLARIYGNSRIDYRYMAVPDFTPEQRLEGDDNFFDDDLNFRMPVEKRLDKFREVAVPLVTDVCARALKDAGVQASEIGKLVVVSSTGFLGPGLDCSLIKTLGLERSVDRSLIGFMGCAAAMNGFRVANDYAASHPGKLALMVCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISGEKPGSAKAKGKFGIVDTHGWLMEGTEDGITLSINENGISCILSKYLPQYIAKNMGGYVESFLGMHNLQKSDMDFWAIHPGGRRIIEEAQNGLGLSEEQAKYSWNVLSNYGNMLSPSVMFVLELILNDHKKALAKGERGLKQGIAFSFSPGVGAEGVLIK 416          
BLAST of mRNA_F-serratus_M_contig113.1159.1 vs. uniprot
Match: A0A7S2WPY4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPY4_9STRA)

HSP 1 Score: 520 bits (1339), Expect = 3.250e-175
Identity = 265/410 (64.63%), Postives = 311/410 (75.85%), Query Frame = 2
Query:  107 ADPSVQIGLACIVLSLLFVVLQSYRKAKDEQTVYPVIAGMAIGNPQYRCTQDQALAIAQKCPGVASVKPVLERIYGNSRIGSRYFAVPDFTPNQAAKGDEMFFP--ADGS--YEVPVDTRLDKFKEKAVPLVSDVARRAIKEAGIDVADVSKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDFVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGIKKSEAPKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHNLGRDDVDFWCVHPGGRRIIEEAQNGLGLTEEQTADSWAVLAEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYKTGMAFSFSPGVGAEGILLKQL 1324
            ADP++ +    +V+SL+ V L   +K K E TVYP+I G A GNP YR +Q +A  IA++ P V  VKP+++RIYGN +I  RY AVPDFTP Q   GDE+FFP   DGS  Y++PV  RLDKF+EKAVPLV+ V  +AI +AGI   DV KLVVVSSTGFLGPGLDC +I+ +GL+R VDR LIGFMGCAAAMNGFR   D+V ++  K AL+ CVELSSVHTTFDDNINDAILHAIF DGCAAAVL G     APKG  AIVD+HAWLMEGTEDGITL+I   GI+C LSK+LPQYIAKN+  + D FL KH++  +D+DFW VHPGGRRIIEEAQNGLGLTEEQ   SW VL +YGNMLSPSVMFVL  +   H   L  G+ G+K G+AFSFSPGVGAEGILLK L
Sbjct:   39 ADPALLLAFVVVVVSLVLV-LGPRQKDKPE-TVYPIILGFATGNPPYRVSQQEAANIAEQAPAVQEVKPLIQRIYGNGKISHRYMAVPDFTPEQTLAGDELFFPPTTDGSDYYKIPVQQRLDKFREKAVPLVAKVCNQAIADAGISKEDVGKLVVVSSTGFLGPGLDCHIIQEIGLSRGVDRALIGFMGCAAAMNGFRVGMDYVRSHD-KAALVCCVELSSVHTTFDDNINDAILHAIFGDGCAAAVLGGRTAKTAPKGGFAIVDDHAWLMEGTEDGITLSINDTGISCKLSKYLPQYIAKNMKGYVDSFLGKHDMTMEDIDFWAVHPGGRRIIEEAQNGLGLTEEQCKYSWEVLRDYGNMLSPSVMFVLELILNEHKRQLTAGEEGFKQGLAFSFSPGVGAEGILLKVL 445          
BLAST of mRNA_F-serratus_M_contig113.1159.1 vs. uniprot
Match: A0A6T7DYK4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DYK4_9STRA)

HSP 1 Score: 504 bits (1297), Expect = 1.130e-169
Identity = 250/387 (64.60%), Postives = 300/387 (77.52%), Query Frame = 2
Query:  179 RKAKDEQTVYPVIAGMAIGNPQYRCTQDQALAIAQKCPGVASVKP-VLERIYGNSRIGSRYFAVPDFTPNQAAKGDEMFFPA--DGS--YEVPVDTRLDKFKEKAVPLVSDVARRAIKEAGIDVADVSKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDFVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGIKKSEAPKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHNLGRDDVDFWCVHPGGRRIIEEAQNGLGLTEEQTADSWAVLAEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYKTGMAFSFSPGVGAEGILLKQL 1324
            +KA   +T YP+I G A GNP+Y+  Q +AL +A+  PG + + P VL+RIYGNS+I SRY  VPDF+P+     D +F+P   DGS  Y++PV+ RLDKF+EKAVPLVS V ++A+ +AGI + D+ KLVVVSSTGFLGPGLDC +I+ +GL+R VDR LIGFMGCAAAMNGFR   D+V ++  K AL+ CVELSSVHTTFDDNIND+ILHAIF DGCAAAVL G   +EAPKG  AI+D+HAWLMEGTEDGITL+I   GI+C LSK+LPQYIAKN+  + DGFL+KH+L  +DVDFW VHPGGRRIIEEAQNGLGLTEEQ   SW VL  YGNMLSPSVMFVL  +   H   L +G  G+  G+AFSFSPGVGAEGILLK L
Sbjct:    9 KKASGSETKYPIILGFATGNPEYKVMQTEALKVAKTSPGGSQIAPGVLDRIYGNSKITSRYLCVPDFSPSLKRDDDPLFYPPTDDGSDWYKIPVNVRLDKFREKAVPLVSAVCKKAVDDAGISMEDIGKLVVVSSTGFLGPGLDCAIIEEIGLSRGVDRALIGFMGCAAAMNGFRVGMDYVRSHE-KAALVCCVELSSVHTTFDDNINDSILHAIFGDGCAAAVLGGRTATEAPKGAFAIIDDHAWLMEGTEDGITLSINEKGISCKLSKYLPQYIAKNMKGYVDGFLEKHDLPFEDVDFWAVHPGGRRIIEEAQNGLGLTEEQCKYSWEVLDTYGNMLSPSVMFVLELILNEHKDELKKGNDGFSQGLAFSFSPGVGAEGILLKVL 394          
BLAST of mRNA_F-serratus_M_contig113.1159.1 vs. uniprot
Match: D7FHT0_ECTSI (Polyketide Synthase III (C-terminal region) Polyketide Synthase III (N-terminal region) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHT0_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 2.400e-162
Identity = 243/381 (63.78%), Postives = 296/381 (77.69%), Query Frame = 2
Query:  101 MLADPSVQIGLA-CIVLSLLF-VVLQSYRKAK---------DEQTVYPVIAGMAIGNPQYRCTQDQALAIAQKCPGVASVKPVLERIYGNSRIGSRYFAVPDFTPNQAAKGDEMFFPADGSYEVPVDTRLDKFKEKAVPLVSDVARRAIKEAGIDVADVSKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDFVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGIKKSEAPKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHNLGRDDVDFWCVHPGGRRIIEEAQNGLGLTEEQTADSWAVLAEYGNMLSPSVMFVLSR 1210
            M AD ++QI LA CIV  L F VVL+S RKAK            TV+ VIA +A G PQYRCTQ+QAL +A K PG  SV+P LER+Y N+ IGSR+FAVPDFTP + A+GD+  FPADGSYEVPVD RL KFK+KA PLV DV+ RAIKE+G+DV+ ++KLVVVSSTGF GPGLDC+LIKNLGL RSVDRT++G MGCA A++G R A+DFV A+PG+ ALM+CVELSS+H  F DN  +A+  A+FADGCAA VLKG +K+E PKG+L + D+H+WL+E +EDGIT+ I+PN I C LSK +P+ IA ++  F DGFL ++++ R DVDFW VHPGG  II E QNGLGLTEE TADSWAVL EYGNMLSP+ MFVLSR
Sbjct:    1 MPADHAIQIVLAYCIVPLLSFLVVLRSVRKAKGFYSRDGERSGSTVHAVIASVATGTPQYRCTQEQALRVASKVPGTKSVRPTLERLYRNTCIGSRHFAVPDFTPQKRAEGDKALFPADGSYEVPVDVRLAKFKQKAAPLVCDVSLRAIKESGVDVSQIAKLVVVSSTGFSGPGLDCDLIKNLGLPRSVDRTMVGLMGCAGALHGLRVASDFVIAHPGECALMVCVELSSLHANFQDNTANAVSMALFADGCAATVLKGARKAECPKGSLVVADSHSWLIEDSEDGITVDIEPNSIVCVLSKLVPKIIANSVGPFVDGFLGRNSMKRKDVDFWVVHPGGSAIITEVQNGLGLTEEHTADSWAVLGEYGNMLSPTSMFVLSR 381          
BLAST of mRNA_F-serratus_M_contig113.1159.1 vs. uniprot
Match: F0Y6J5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6J5_AURAN)

HSP 1 Score: 426 bits (1095), Expect = 8.290e-141
Identity = 208/294 (70.75%), Postives = 240/294 (81.63%), Query Frame = 2
Query:  437 VPVDTRLDKFKEKAVPLVSDVARRAIKEAGIDVADVSKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDFVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGIKK-SEAPKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFLPQYIAKNIAFFADGFLKKHNLGRDDVDFWCVHPGGRRIIEEAQNGLGLTEEQTADSWAVLAEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYKTGMAFSFSPGVGAEGILL 1315
            +PV+ RLD F+EK+VPLV+ V + A+ +AGIDV  + KLVVVSSTGFLGPGLD ELIK LGL R VDR+LIGFMGCAAAMNGFR ANDF  ++PGK ALM+CVE+SSVHTTFDDN+NDAILHAIFADGCAAAV+ G K  S A KG   IVD H WLMEGTEDGITL+I  NGI+C LSK+LPQYIAKN+A + D FL  H L + D+DFW +HPGGRRIIEEAQNGLGL+EEQ   SW VL++YGNMLSPSVMFVL  +   H  ALA+G+ G K G+AFSFSPGVGAEGIL+
Sbjct:    1 MPVEKRLDMFREKSVPLVTKVCKDAMADAGIDVEQIGKLVVVSSTGFLGPGLDAELIKTLGLWRGVDRSLIGFMGCAAAMNGFRVANDFAMSHPGKMALMVCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISGEKPGSAAAKGKFGIVDTHGWLMEGTEDGITLSINENGISCILSKYLPQYIAKNMAGYVDSFLGMHGLQKTDMDFWAIHPGGRRIIEEAQNGLGLSEEQAKYSWTVLSQYGNMLSPSVMFVLELILNDHKKALAKGERGLKQGIAFSFSPGVGAEGILI 294          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig113.1159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ35_ECTSI2.090e-27290.60Polyketide Synthase III n=3 Tax=Phaeophyceae TaxID... [more]
A0A7S2V1U6_9STRA4.000e-20872.84Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CMD8_9STRA3.170e-19772.59Polyketide synthase III n=1 Tax=Tribonema minus Ta... [more]
A0A6V1RDH2_HETAK4.970e-18467.69Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3NPW3_9STRA1.110e-18067.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2SDG4_9STRA5.320e-18067.46Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2WPY4_9STRA3.250e-17564.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6T7DYK4_9STRA1.130e-16964.60Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
D7FHT0_ECTSI2.400e-16263.78Polyketide Synthase III (C-terminal region) Polyke... [more]
F0Y6J5_AURAN8.290e-14170.75Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig113contigF-serratus_M_contig113:349512..355774 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score766.1
Seed ortholog evalue8.1e-219
Seed eggNOG ortholog2880.D8LJ35
KEGG rclassRC00004,RC02726,RC02970
KEGG koko:K00660,ko:K13234,ko:K21384
KEGG ReactionR01613,R06568,R07987,R07988,R07989,R08808,R08810
KEGG Pathwayko00941,ko00945,ko01100,ko01110,ko04712,map00941,map00945,map01100,map01110,map04712
KEGG ModuleM00137
Hectar predicted targeting categorysignal anchor
GOsGO:0000325,GO:0001101,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0006810,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009058,GO:0009314,GO:0009411,GO:0009416,GO:0009611,GO:0009628,GO:0009629,GO:0009705,GO:0009719,GO:0009725,GO:0009733,GO:0009753,GO:0009812,GO:0009813,GO:0009889,GO:0009914,GO:0009926,GO:0009962,GO:0010033,GO:0010224,GO:0010817,GO:0012505,GO:0016020,GO:0019222,GO:0031090,GO:0031537,GO:0031540,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0060918,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0098588,GO:0098805,GO:1901576,GO:1901700
EggNOG free text desc.naringenin-chalcone synthase activity
EggNOG OGs2S4A6@2759,COG3424@1
Ec32 ortholog descriptionType III Polyketide Synthase (phloroglucinol synthase)
Ec32 orthologEc-02_004580.1
EC2.3.1.177,2.3.1.208,2.3.1.217,2.3.1.74
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01008
Exons7
Model size2395
Cds size1248
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929027.0826938-UTR-F-serratus_M_contig113:349511..3495901622929027.0826938-UTR-F-serratus_M_contig113:349511..349590Fucus serratus maleUTRF-serratus_M_contig113 349512..349590 +
1690962672.7220376-UTR-F-serratus_M_contig113:349511..3495901690962672.7220376-UTR-F-serratus_M_contig113:349511..349590Fucus serratus maleUTRF-serratus_M_contig113 349512..349590 +
1622929027.1913576-UTR-F-serratus_M_contig113:354706..3557741622929027.1913576-UTR-F-serratus_M_contig113:354706..355774Fucus serratus maleUTRF-serratus_M_contig113 354707..355774 +
1690962672.8048525-UTR-F-serratus_M_contig113:354706..3557741690962672.8048525-UTR-F-serratus_M_contig113:354706..355774Fucus serratus maleUTRF-serratus_M_contig113 354707..355774 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929027.093813-CDS-F-serratus_M_contig113:349590..3496721622929027.093813-CDS-F-serratus_M_contig113:349590..349672Fucus serratus maleCDSF-serratus_M_contig113 349591..349672 +
1690962672.734787-CDS-F-serratus_M_contig113:349590..3496721690962672.734787-CDS-F-serratus_M_contig113:349590..349672Fucus serratus maleCDSF-serratus_M_contig113 349591..349672 +
1622929027.104575-CDS-F-serratus_M_contig113:351724..3519991622929027.104575-CDS-F-serratus_M_contig113:351724..351999Fucus serratus maleCDSF-serratus_M_contig113 351725..351999 +
1690962672.7444577-CDS-F-serratus_M_contig113:351724..3519991690962672.7444577-CDS-F-serratus_M_contig113:351724..351999Fucus serratus maleCDSF-serratus_M_contig113 351725..351999 +
1622929027.117044-CDS-F-serratus_M_contig113:352943..3532161622929027.117044-CDS-F-serratus_M_contig113:352943..353216Fucus serratus maleCDSF-serratus_M_contig113 352944..353216 +
1690962672.7523425-CDS-F-serratus_M_contig113:352943..3532161690962672.7523425-CDS-F-serratus_M_contig113:352943..353216Fucus serratus maleCDSF-serratus_M_contig113 352944..353216 +
1622929027.132705-CDS-F-serratus_M_contig113:353417..3535761622929027.132705-CDS-F-serratus_M_contig113:353417..353576Fucus serratus maleCDSF-serratus_M_contig113 353418..353576 +
1690962672.7655797-CDS-F-serratus_M_contig113:353417..3535761690962672.7655797-CDS-F-serratus_M_contig113:353417..353576Fucus serratus maleCDSF-serratus_M_contig113 353418..353576 +
1622929027.149816-CDS-F-serratus_M_contig113:353779..3539661622929027.149816-CDS-F-serratus_M_contig113:353779..353966Fucus serratus maleCDSF-serratus_M_contig113 353780..353966 +
1690962672.775232-CDS-F-serratus_M_contig113:353779..3539661690962672.775232-CDS-F-serratus_M_contig113:353779..353966Fucus serratus maleCDSF-serratus_M_contig113 353780..353966 +
1622929027.1634545-CDS-F-serratus_M_contig113:354160..3543141622929027.1634545-CDS-F-serratus_M_contig113:354160..354314Fucus serratus maleCDSF-serratus_M_contig113 354161..354314 +
1690962672.7838912-CDS-F-serratus_M_contig113:354160..3543141690962672.7838912-CDS-F-serratus_M_contig113:354160..354314Fucus serratus maleCDSF-serratus_M_contig113 354161..354314 +
1622929027.1761217-CDS-F-serratus_M_contig113:354588..3547061622929027.1761217-CDS-F-serratus_M_contig113:354588..354706Fucus serratus maleCDSF-serratus_M_contig113 354589..354706 +
1690962672.7942204-CDS-F-serratus_M_contig113:354588..3547061690962672.7942204-CDS-F-serratus_M_contig113:354588..354706Fucus serratus maleCDSF-serratus_M_contig113 354589..354706 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig113.1159.1prot_F-serratus_M_contig113.1159.1Fucus serratus malepolypeptideF-serratus_M_contig113 349591..354706 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig113.1159.1

>prot_F-serratus_M_contig113.1159.1 ID=prot_F-serratus_M_contig113.1159.1|Name=mRNA_F-serratus_M_contig113.1159.1|organism=Fucus serratus male|type=polypeptide|length=416bp
MSPAVVDMLADPSVQIGLACIVLSLLFVVLQSYRKAKDEQTVYPVIAGMA
IGNPQYRCTQDQALAIAQKCPGVASVKPVLERIYGNSRIGSRYFAVPDFT
PNQAAKGDEMFFPADGSYEVPVDTRLDKFKEKAVPLVSDVARRAIKEAGI
DVADVSKLVVVSSTGFLGPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMN
GFRNANDFVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAA
AVLKGIKKSEAPKGTLAIVDNHAWLMEGTEDGITLAIKPNGITCTLSKFL
PQYIAKNIAFFADGFLKKHNLGRDDVDFWCVHPGGRRIIEEAQNGLGLTE
EQTADSWAVLAEYGNMLSPSVMFVLSRVFKRHNAALAQGKPGYKTGMAFS
FSPGVGAEGILLKQL*
back to top

mRNA from alignment at F-serratus_M_contig113:349512..355774+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig113.1159.1 ID=mRNA_F-serratus_M_contig113.1159.1|Name=mRNA_F-serratus_M_contig113.1159.1|organism=Fucus serratus male|type=mRNA|length=6263bp|location=Sequence derived from alignment at F-serratus_M_contig113:349512..355774+ (Fucus serratus male)
CACACTCTTCCTGTTTCCAGCACAGCAAAGGGGGCACAAGCAGCCAGGAC ACCACACAGCCACCGCTATCATCTCGATCATGTCTCCGGCAGTAGTGGAT ATGTTGGCGGACCCGAGCGTACAGATCGGCCTGGCTTGCATCGTGCTCTC TCTGCTTTTCGGTGAGTACAACAATCTGTCAGGACAGTAGGGCACACACA GTACTGTATCTCACATGCGGAATTACTTGGTATCAGGCCAGGTTCATCGC TGGGGTAGAGGTTCACGCTTTCTTTGCTCAGCCCCGACGGAGCCACTGTC AAGAGCAGAGGCAAACACACAACACCGTGAAGGAAGCCGACGGGCGCATT CCAGACGATGAGCACGTTGTGCCATCGATATCTGCATCTCCCCAATGCAG AACCCAGAGGCAGGCAGGAATTCGTCCTGATCACGCTTATTCCTACACTT TGAACGATCAAACCGTATGTACGGTACTAATTTTACTTGTTCATTCGACA GAGCAGCCTACGAAGGACACAAAAGGTGCCCGACAGCCACATGCCACTTG ATGCCAGAACCGAGGCAGCCCGTGCTGACACAGACTTGGGTACCTGACGA GGTTTAGCACGGTTTTCCTTGCTCCGAGCTACGGACGGTCGTGCCCACAC ATTTCTGCACGTACCTCGTGTGCCGCGCGCTTGCTTGGACAACCATTGAA ACACCAAACACAAGCAAAAACAGAGAGGGGAATCACTGCCTTTTGACCGC ATCGATCGGAGCACTATACAAACCAAACAGTAAGGTTGCCTCTCAGGTTT GTCACTAGGCCTAGCACCGTTCCGACATAGTTCGGCCAAGGTATTACCCC GTTCCTGCTCCTGCCAGGAGCTTTGATGCAACTTGTAGATATCGTACAGC CAGGAAGTTTGCTGCACGTACTCTCTCTTCCAATTGTTTTGGAACCGAAC CGACTGCCATAGGTTATGCAGCGGGTTCTCTTACACACAATGTTCATGTT TTTGTCACTATTAAAAAAAAGTGACGGCGTTTTTTCTAGTTCCTTGTTTC TATCCTTATTATGCTGAAGTCACGCACTACGCGATCGTCCGTCATTCTGT ACCGGTACTGTGTATAGTTCCATAGCAACGGTCAGCTCACCATAGACTAT GCACAAACCTTACACACAGCATGTACGCGTATCGGTAGTATCTCGCACAA GCACAGCGTGACAGACACGAATTTTGTTCTCTCACAGGTATATAGTAGCT TAATCCTGTACAGCTAGACCTACAGTAGTTTTATAGCAGCTCTAACTGTA CTACTGTACAAAGTTTATACAGTATGTCTATCTTCCTTACCACCATTCTC GATTGGAAGTAACTCCACCCTGATCACGATTTTTTTACCCGGGAAGGTAC AAAGTTTCAATTTCTGCTGTGTCCTAATATAAATCAAACCATTCGTGACG AATCTACTATTATACTGTTATGTATTAACAGCCAAAGAACCCATGGACGC TACAGAGTTATGCAAGTGAGAGAACAAGTATTGTACTGATATACTGTAGA TACGTGTACAATAGATCAGTACTAATATATAGTACAAGTTGCTTGGTTCT TGTAGGCGTACCACGAGCACGTACACAGAACTGCTGCGCTCTGTGTACAT GGCTCACCTTTTTGTGTGGCCACTGGCATTGACGCAATGAAGGGACGCAA TCGATGAGGACGTACACAGAACTGCTGCGCTCTGTGCACATGGCTCACCT TTTTTTGTGACCACTGGCATTGACGCAATAAAAGGACGCAATCGATGAGC ACGTACACAGAACTGCTGCGCTCTGTGTACATGGCTCACCTTTTTTTGTG TGGCCACTGGCATTGACGCAATGAAGGGACGCAATCGATGAACTCGAAGA AATTTGTCCTTTACGTCAGGCTAAAACGAACACAGTCACCCACTGGTGTT TAAGTCAGTGATGCGATGCTCGCATTTTGGAGGAGAGGGGGACGCACGCA GCGTTCGACACACACCCCAGACTAGCCGAAAGAAGCACGTACAGTAGTCA TTGTAGTAATAATATTATAGTTCGCTTTTTAGGGTGAACGTGTGTAGATG ATGGTTTGAACATCTCACGCACCCTTGATTTTTTCATCTGACTGTCTGTT GTGTTCCCGACGTGGCGCTACCCCCTTCTCACGCGCGATCCTATTCATAC TGTATTATAATAGTAGTGCTGCAGTCCTACCGCAAGGCGAAGGATGAGCA GACCGTCTACCCCGTCATCGCGGGCATGGCGATCGGCAACCCGCAGTACC GCTGCACCCAGGATCAGGCTCTCGCGATCGCCCAGAAGTGCCCCGGCGTG GCGTCTGTGAAGCCCGTGCTCGAGCGCATCTACGGCAACTCTCGCATCGG AAGCCGCTACTTCGCCGTGCCGGACTTCACTCCCAACCAGGCCGCGAAGG GGGACGAGATGTTTTTCCCTGCCGACGGTAGCTACGAGGTCAGTGCGACT CTCCAAACCTTCTAACGCAGGGTCACTCCCAGACTTGAAAACAACAATTG ACGAAGGGACAGTTTTGCGCTTTTAGTAGCCATGTTTTGGAACGGGGCGG TGCGGTCACGCTTGCTTGCCCGATAGCGCGATCGCACGGTAATATTTTAG TGTTTTGACAATCCAATATAGGTTAAAGTAGAGAAGAGCTGCCCCCCGGT GTACTCGGCGAATAAAATTTCCGCTTTTTGCGTTCATAAAAGAGTGACGT GACGAAGGTTAACAGCAACTCTTGGCCCGTACGTATATAATACATGTTAA CTTGCACAGCAGTCCGTACCAATAGGGGGTGCGGGAAAGAGAGGCGCACA TTAATTGGTCCATGGTGACCTGCCAAGGCAGCACCCGTTGGGAACTACTT TGAGGTTTACTGGGCCTGTGCCGGCGGACTCTCGGTAGTGAACGCCGTCG GTACGCAATTGCGTGACCCGAAAAACTCGGGACTGGCCCGATGGCGTATG GCGGTTGAAATAAATAAATTCCGTAAGGAAGCGTAAGATTCAGCCCGAGT ATGGAGATTAGCAGGCTGACGTTGGACGGAACTATCGAACCCGTCTCGCG AGACCAAGTCTCAGGCGTGAATGCGGACAGGGAAATATTATTTTTCCCTG TTCAGCTGACCGTGTGCAGGACTGGCAACCTTACCCGGTTGATCCACACA CCAACCATGCAGCAGTGTTGACCTGGTTTATATAAGAAGAGTAGTAATTC GATAACGAACCGTCACATGTCCGAAATTTGAACAGCTTCATTTTGTAGTA GTAATAGTACTAGTTTGTCCAGACGATCATTTTCACTTGTTTTGTTCGTT CTTGCAAATATTATTTCGTGTGGGCAATATCCCACATAACCAACCGCAAC AAAAACCTGCCCATCTGTACCCCGTGACCCAGGTGCCCGTCGACACCCGC CTCGACAAGTTCAAGGAGAAGGCGGTGCCTCTTGTGTCCGACGTTGCTCG CCGCGCCATCAAGGAGGCGGGAATCGACGTGGCCGACGTATCGAAGCTCG TGGTAGTGTCTTCGACTGGTTTCCTCGGCCCCGGCCTTGACTGCGAGCTG ATCAAGAACCTGGGCCTCACCCGCTCCGTCGACCGTACCCTCATCGGCTT CATGGGGTGCGCCGCGGCCATGAACGGCTTCCGCAACGCGAACGACTTCG TGACTGTGAGTTGCCGAAGGACTGGAGAGATTACCGGGTAATTTGTTTTT TTTTTGGGGGGGGGGGGGGGCGTTGGTCGGAGCCTGGAACGGAAAAGGTT AAAAGTGTATTATCGTGCAGGCGTGTGGCGTAGGCGCGAAACTACGCTCG GCAGGATTTTTCACCGGAGCTCCTTTTTACTGTGGTTCCATGTGTTTGTT TTTCAGGCCAACCCCGGCAAGTACGCCCTGATGATCTGCGTCGAGCTTTC CTCGGTGCACACGACCTTCGACGACAACATCAACGACGCAATCCTCCACG CGATCTTCGCCGACGGGTGCGCCGCCGCCGTGCTCAAGGGTATCAAGAAG TCCGAGGCCCCTAAGGTATATACAATAAATGTAGTAGGTTTCGAAGAAAA TTTCGTTGTCGGGAACACGTTCAAATTCACTTGGCCATGGTTTCGGAACG CGCGGCATTTTGCGTTTCGTGAGAGATAGTCCACGTGACGAATATGAAGG TGGCTTGACCCCCAAGTGTGGGTTTAGCTGACTCCCGCCGTCCGCGCACT GGTTTGGCGCACCCGCAGGGAACCCTGGCGATCGTCGACAACCACGCGTG GCTCATGGAGGGCACCGAGGACGGTATCACCCTCGCGATCAAGCCCAACG GCATCACCTGCACTCTCTCTAAGTTCCTGCCCCAGTACATCGCCAAGAAC ATCGCGTTCTTCGCCGACGGCTTCCTCAAGAAGCACAACCTCGGCCGTGA CGACGGTGAGTGTTGGCTTAAAGGAGTAATACTTGTAATATATTAGAACA CAATACTCTTGTGATTGGGGCGGTGCAATGATGCCCATTGGACGCGGGCC TTTGCGTGTAACACCGTTCAAGAAATGTTTACCTCCCACTAACGTCACGC CGGCCCTTCGCCCGTCTTGGTGGGTCTTGCATTCACGCTGCTGTAACAGT TGACTTCTGGTGCGTGCACCCCGGGGGACGCCGTATCATTGAGGAGGCGC AGAACGGGCTCGGCCTCACGGAGGAGCAGACCGCGGACTCGTGGGCGGTG CTTGCCGAGTACGGGAACATGCTTTCGCCGTCGGTGATGTTTGTGCTGTC CAGGTGGGGAAAGCCCGCGATGAAGTATTCTAAACGTGACGTCGTAAATC ATCGAGTGCTACGCTACACGTGCCGAAGTTATGTTTAGTAGAACAGCATG TTCAGTCAGTCAGCTCTGTGAAACCCTTCCACCTTCTTTTTGGCTTTTTG CCGAGATCGAGCGTGCGTTGTCCACGATGCACCACGATGCATTTTATCCA TCTCTCGGCTCATCCACGCTGTCTTCGTCGATCCGGTGGTCGATTTTACC TTCTCGTGCCCTTTGTACGACGACCAGGGTGTTCAAGCGCCACAACGCCG CGCTCGCGCAAGGAAAGCCTGGCTACAAGACCGGCATGGCGTTCTCGTTT TCCCCGGGCGTGGGCGCCGAGGGTATCCTTCTCAAGCAGCTCTAAAAGGA GCGCGAAAGGATTGGAGATTGCGACACGCTCCGAGTAGTACATAACTGGA GGGTGTTCGGCGGAGAAAGGCCATCGTATACTGTTGTAGTCACCGATGCG ATCCCATCACACCCGAGTTGGGGCACGGGTCAGCTCGTTTTTTATGTTGC ACGTATGTCTCTGTTGCGTAAAATACCTTTTGAGGCGGCTTGCCAGTAAG GTTTTATGTCTCGGGAGCCAGCGTTGTGTCCCATTCGTTGAGCGACGACA CTCGAGCGGTTCCCATCAGGCTATTCGCGCGCAGTCCCATTGAAGCTGAT GGCGCAACGAAAAAAATGCGGCGAGGGATTTGGGGGCGAGTGAAATCTCG CGGCAACGACGGTGTACTCTTTTGTGACAGCTCTCAGTTTACTCTTGCGT GAGATTCTTGGGCCACTCTAGAAGCGATTCCCTGTTCCCTTTTATGGGTC GCATCGCAAGCGTCTTCCCCCCCAGCACCGCTTCCTCTTCTTAACGGGTG GTCATTTGCCGACCACTTTTGGGCTCCTCCCCTCTCGAAAAAGAGTTGGT GTTCCAAGTTTTGAAGTACGCGGTAAAGATTATGTTCCTTGCGCCACGTG TGGCAGAACAGGGGAAGCATAATAGCTTCTATATAACTCCAGTGCTGCTG TTCTATTGCGGTAGCGTGTTTGTCTTGAGAGGTTGGTGGGTACCTTGTTT TTGTCAAAACGTTTTGTTGGTGCTGTTTATTGATCGTACGATTGTACTGT TTGTTGGGTCACAACGGGTGTGGAGGGTCGTCGCGAGTGGAAAGCGTTCA CTTTGCTGCGGAGGAGGCAGGAATATGTAGTTCGATTTAGTTCGGGTGCG GTTTTGTCGCCTGCACCACCGGGACATGTTGATCGCGTCATCAATTTTGG CAAAACACCTCGCTCGATGATAAATGAAATATATTTCTCATATATGGTTA CAATCTTTCCCTCGTCGAGGATCAATAAGGAATATCAAAAGGAAGTGAGA TAACTACCTGCTTGTATCTCCTAGCTCATGGCGGATGGGCTTCAACGGGC CAGGTCATCAAGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig113:349512..355774+

>mRNA_F-serratus_M_contig113.1159.1 ID=mRNA_F-serratus_M_contig113.1159.1|Name=mRNA_F-serratus_M_contig113.1159.1|organism=Fucus serratus male|type=CDS|length=2496bp|location=Sequence derived from alignment at F-serratus_M_contig113:349512..355774+ (Fucus serratus male)
ATGTCTCCGGCAGTAGTGGATATGTTGGCGGACCCGAGCGTACAGATCGG
CCTGGCTTGCATCGTGCTCTCTCTGCTTTTCGATGTCTCCGGCAGTAGTG
GATATGTTGGCGGACCCGAGCGTACAGATCGGCCTGGCTTGCATCGTGCT
CTCTCTGCTTTTCGTAGTGCTGCAGTCCTACCGCAAGGCGAAGGATGAGC
AGACCGTCTACCCCGTCATCGCGGGCATGGCGATCGGCAACCCGCAGTAC
CGCTGCACCCAGGATCAGGCTCTCGCGATCGCCCAGAAGTGCCCCGGCGT
GGCGTCTGTGAAGCCCGTGCTCGAGCGCATCTACGGCAACTCTCGCATCG
GAAGCCGCTACTTCGCCGTGCCGGACTTCACTCCCAACCAGGCCGCGAAG
GGGGACGAGATGTTTTTCCCTGCCGACGGTAGCTACGAGTAGTGCTGCAG
TCCTACCGCAAGGCGAAGGATGAGCAGACCGTCTACCCCGTCATCGCGGG
CATGGCGATCGGCAACCCGCAGTACCGCTGCACCCAGGATCAGGCTCTCG
CGATCGCCCAGAAGTGCCCCGGCGTGGCGTCTGTGAAGCCCGTGCTCGAG
CGCATCTACGGCAACTCTCGCATCGGAAGCCGCTACTTCGCCGTGCCGGA
CTTCACTCCCAACCAGGCCGCGAAGGGGGACGAGATGTTTTTCCCTGCCG
ACGGTAGCTACGAGGTGCCCGTCGACACCCGCCTCGACAAGTTCAAGGAG
AAGGCGGTGCCTCTTGTGTCCGACGTTGCTCGCCGCGCCATCAAGGAGGC
GGGAATCGACGTGGCCGACGTATCGAAGCTCGTGGTAGTGTCTTCGACTG
GTTTCCTCGGCCCCGGCCTTGACTGCGAGCTGATCAAGAACCTGGGCCTC
ACCCGCTCCGTCGACCGTACCCTCATCGGCTTCATGGGGTGCGCCGCGGC
CATGAACGGCTTCCGCAACGCGAACGACTTCGTGACTGTGCCCGTCGACA
CCCGCCTCGACAAGTTCAAGGAGAAGGCGGTGCCTCTTGTGTCCGACGTT
GCTCGCCGCGCCATCAAGGAGGCGGGAATCGACGTGGCCGACGTATCGAA
GCTCGTGGTAGTGTCTTCGACTGGTTTCCTCGGCCCCGGCCTTGACTGCG
AGCTGATCAAGAACCTGGGCCTCACCCGCTCCGTCGACCGTACCCTCATC
GGCTTCATGGGGTGCGCCGCGGCCATGAACGGCTTCCGCAACGCGAACGA
CTTCGTGACTGCCAACCCCGGCAAGTACGCCCTGATGATCTGCGTCGAGC
TTTCCTCGGTGCACACGACCTTCGACGACAACATCAACGACGCAATCCTC
CACGCGATCTTCGCCGACGGGTGCGCCGCCGCCGTGCTCAAGGGTATCAA
GAAGTCCGAGGCCCCTAAGGCCAACCCCGGCAAGTACGCCCTGATGATCT
GCGTCGAGCTTTCCTCGGTGCACACGACCTTCGACGACAACATCAACGAC
GCAATCCTCCACGCGATCTTCGCCGACGGGTGCGCCGCCGCCGTGCTCAA
GGGTATCAAGAAGTCCGAGGCCCCTAAGGGAACCCTGGCGATCGTCGACA
ACCACGCGTGGCTCATGGAGGGCACCGAGGACGGTATCACCCTCGCGATC
AAGCCCAACGGCATCACCTGCACTCTCTCTAAGTTCCTGCCCCAGTACAT
CGCCAAGAACATCGCGTTCTTCGCCGACGGCTTCCTCAAGAAGCACAACC
TCGGCCGTGACGACGGGAACCCTGGCGATCGTCGACAACCACGCGTGGCT
CATGGAGGGCACCGAGGACGGTATCACCCTCGCGATCAAGCCCAACGGCA
TCACCTGCACTCTCTCTAAGTTCCTGCCCCAGTACATCGCCAAGAACATC
GCGTTCTTCGCCGACGGCTTCCTCAAGAAGCACAACCTCGGCCGTGACGA
CGTTGACTTCTGGTGCGTGCACCCCGGGGGACGCCGTATCATTGAGGAGG
CGCAGAACGGGCTCGGCCTCACGGAGGAGCAGACCGCGGACTCGTGGGCG
GTGCTTGCCGAGTACGGGAACATGCTTTCGCCGTCGGTGATGTTTGTGCT
GTCCAGTTGACTTCTGGTGCGTGCACCCCGGGGGACGCCGTATCATTGAG
GAGGCGCAGAACGGGCTCGGCCTCACGGAGGAGCAGACCGCGGACTCGTG
GGCGGTGCTTGCCGAGTACGGGAACATGCTTTCGCCGTCGGTGATGTTTG
TGCTGTCCAGGGTGTTCAAGCGCCACAACGCCGCGCTCGCGCAAGGAAAG
CCTGGCTACAAGACCGGCATGGCGTTCTCGTTTTCCCCGGGCGTGGGCGC
CGAGGGTATCCTTCTCAAGCAGCTCTAAGGTGTTCAAGCGCCACAACGCC
GCGCTCGCGCAAGGAAAGCCTGGCTACAAGACCGGCATGGCGTTCTCGTT
TTCCCCGGGCGTGGGCGCCGAGGGTATCCTTCTCAAGCAGCTCTAA
back to top