mRNA_F-serratus_M_contig113.1157.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig113.1157.1 vs. uniprot
Match: D8LJ33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ33_ECTSI) HSP 1 Score: 106 bits (264), Expect = 6.230e-20 Identity = 79/209 (37.80%), Postives = 100/209 (47.85%), Query Frame = 3
Query: 6 WEMKSTPAGEVYYVNHKTEETTWDRP-----VAPHAAASLAADPYAQNP--PAFGSCSSSTPLWSPLPPNLPRPS---------APAASAFQGGEPPLPEGWEMKTTASGEVFYVNHTTKATSWERP-ATPPLAVAT-----PVVGNRELP--LPPASTSWSSTIGSPSVPGGELPLAAGWEQKTTPTGEVYYVNHKTKSTTWERPVAP 560
W + T G+V+Y+NHK + T+W+RP A+ ++ + P P GS +S+ S P S A SA GE PLP GW TA GE+FYVNH K T+W RP P ++VA P G E P S+S S+ G GG PL GW K TGEVYYVNH K+T+WERP P
Sbjct: 169 WTAEKTADGKVFYINHKHKTTSWERPEXXXXXXXXXXAAFSSSNGRRQPAGPQHGSVNSARSTGSNDAKRAPFGSNNRGSFGSNRSAGSAGSSGETPLPPGWSESKTAGGEIFYVNHKEKKTTWVRPKGIPQISVAEEHPPQPRWGEEETTSFAPAYSSSGSAASGGL---GGVQPLPVGWTSKVMATGEVYYVNHVDKTTSWERPTVP 374
BLAST of mRNA_F-serratus_M_contig113.1157.1 vs. uniprot
Match: A0A7S4MHN5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MHN5_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.270e-18 Identity = 206/743 (27.73%), Postives = 283/743 (38.09%), Query Frame = 3
Query: 3 GW-EMKSTPAGEVYYVNHKTEETTWDRPVAPHAAASLAADPYAQNPPAFGSCSSSTPLWSPLPPNLPRPSAPAASA----------FQGGEP-----PLPEGW-EMKTTASGEVFYVNHTTKATSWERPAT-----------PP--------------------LAVATPVVGNRELPLPPASTSWSSTIGSPSVPG-GELPLAAGW-EQKTTPTGEVYYVNHKTKSTTWERPVAPPAAVTPRVVHDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPATNPETSKLAQSAV--STPPGVISAEDPLTKVVVGAQKQTNASPEAGQGWLKKGKQTPSEKKTKVKGAKA---TNLESSMVSSA-------DITSPGSSSG---ESPLPPEW-EKKTTPTGEVYYVNHLTKETSWDRPAAPRP-----ASFPTANPRTSKQAQSAVSTPLGVVSPEDPLTKVVVGAQKQSSASPRAGKGWLKKEWDKKTTLTGEVYYVNHKTKETTWDRPSAPCPASFPAAKPETSKLAQPAVSSASPEAGKAWLKKGGKKKTPPEKNPQIKKTKATNLESPMTSPAAIATSDSSTSE------------------SPLPPEW-EKKTTPTGEVYYVNHKTKETNWNRPAAPRSASFPAAVPETSKLAQSTTVSIDREVVDPEKEMPASDVSVQQEQGSTRTNAEEPLPEGWEEKTTA-TGKVYYINHKTQTTSWCKPLPASS 1958
GW E+ +G+VYY N TEET WDRP AP AA + + P +++ +P + PA GGE LP GW EM ASG+V+Y N T TSWERPA PP G EL PP + S G G L GW E + +VYY N T T W+RP PAA T V DA+ XXXXXXXXXXXX T E K S+ + P G + D + V Q N + L +G +P+E T KG T E +V+SA ++ G SG LP W E +G+VYY N +T+ETSWDRPAA +P S P +Q + A + + +S E AQ++ SP GW+ + ++G+VYY N T+ET+W+ P+ A K G E+ P+ ++ +A + P A ++ T + LP W E +G+VYY N T ET+W++P A + V E + + S E P E + +V +QG T E LP+GW E T +G+VYY + + TSW +P+ S
Sbjct: 541 GWTEVFDESSGQVYYYNEVTEETLWDRPAAPTTAAEASVPEEENDAPVPADVTTAPEEVAPEETKILGQEEPAPEETPGEVKSEDEVDGGEALSLPLSLPPGWAEMFDEASGQVYYYNEGTGETSWERPAPVMEEAAEESAEPPKEGEEEXXXXXXXXXXXXXXXXXXXTEAGTEELDAPPKDEARPEEERVESSAGEGGCALPDGWVEVADESSSQVYYYNESTGETAWDRPA--PAAAT-AVPEDAKESATESPVEGKGEPPAEXXXXXXXXXXXXGKP----------TRDEAPKSTDSSEKGALPEGWVEVADESSGQVY-YYNQINEETSWERPVLAEG--SPAEA-TDGKGEAEELPTTEEEVVVASAGEKAAGEEVPQEGDESGGEGAGALPEGWVEVADENSGQVYYYNTITEETSWDRPAAAQPDAEGKESEPPVEGGAEEQEEKAPAEDVKPLSEE--------AAQEEEDESPLPA-GWV----EMVDEVSGDVYYYNEVTEETSWELPTV------------------------------ADTKPG-------EEGPEEEEAQAEEVP-----PTEEAATEEGTEXXXXXXXXXXXXXXXXXXXAALPEGWVEVADESSGQVYYYNEGTGETSWDKPVAQPETAASEDVVEGEEKEEEGFESPAAEDA-PSSESTGEEAAV--DQGEVPTPGGEALPDGWVEVTDEDSGQVYYYHEERGETSWDRPVQEES 1208
BLAST of mRNA_F-serratus_M_contig113.1157.1 vs. uniprot
Match: A0A0L0D4F1_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D4F1_THETB) HSP 1 Score: 101 bits (251), Expect = 1.920e-18 Identity = 66/189 (34.92%), Postives = 79/189 (41.80%), Query Frame = 3
Query: 3 GWEMKSTPAGEVYYVNHKTEETTWDRPVAPHAAASLAADPYAQNPPAFGSCSSSTPLWSPLPPNLPRPSAPAASAFQGGEPPLPEGWEMKTTASGEVFYVNHTTKATSWERPATPPLAVATPVVGNRELPLPPASTSWSSTIGSPSVPGGELPLAAGWEQKTTPTGEVYYVNHKTKSTTWERPVAPPAA 569
GWE + T G+VYY N T+ T W RP P AAA A A G LP GWE + TA G+V+Y N TK+T WERP P G +P+ + P G L AGWE++ T G+VYY N TKST WERP PAA
Sbjct: 133 GWEERRTADGKVYYANSITKSTQWTRPTGPPAAAXXXXXXXXXX----------------XXXXXXXXXXXXAVATPAGPGALPAGWEERRTADGKVYYANSITKSTQWERPVGAP-------AGGSHVPMXXXXXXXXXXXXXXATPAGPGALPAGWEERRTADGKVYYANSITKSTQWERPTGMPAA 298
BLAST of mRNA_F-serratus_M_contig113.1157.1 vs. uniprot
Match: A0A1M8AC45_MALS4 (E3 ubiquitin-protein ligase n=2 Tax=Malassezia sympodialis (strain ATCC 42132) TaxID=1230383 RepID=A0A1M8AC45_MALS4) HSP 1 Score: 100 bits (249), Expect = 3.950e-18 Identity = 71/201 (35.32%), Postives = 94/201 (46.77%), Query Frame = 3
Query: 3 GWEMKSTPAGEVYYVNHKTEETTWDRPV----APHAAASL---------AADPY--AQNPPAFGSCSSSTPLWSPLPPNLPRPSAPAASAFQGGEPPLPEGWEMKTTASGEVFYVNHTTKATSWERPATPPLAVATPVVGNRELPLPPASTSWSSTIGSPSVPGGELPLAAGWEQKTTPTGEVYYVNHKTKSTTWERPVAP 560
GWE ++ G YYV+H T TTW RP A A A + AD + NP S + STP+ + A+SA G PLP GWE +TTA G ++V+H T+ T+W P + GN L L P S S +G PL +GWE + T T VY+V+H TK+TTW+ P P
Sbjct: 251 GWERRTDHLGRTYYVDHNTRSTTWTRPSNNPPAQRADAGMDRTRMNNMAVADDFLGVDNPSQGSSAAQSTPVGA------------ASSATSSGSGPLPSGWEQRTTAEGRPYFVDHNTRTTTWVDPRRQQILRIMGPNGNN-LSLQPQSVS---QLG---------PLPSGWEMRLTSTARVYFVDHNTKTTTWDDPRLP 426
BLAST of mRNA_F-serratus_M_contig113.1157.1 vs. uniprot
Match: A0A0L0S7E5_ALLM3 (E3 ubiquitin-protein ligase n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S7E5_ALLM3) HSP 1 Score: 99.4 bits (246), Expect = 8.410e-18 Identity = 64/188 (34.04%), Postives = 93/188 (49.47%), Query Frame = 3
Query: 3 GWEMKSTPAGEVYYVNHKTEETTWDRPVAPHAAASLAADPYAQNPPAF-GSCSSSTPLWSPLPPNLPRPSAPAASAFQGGEPPLPEGWEMKTTASGEVFYVNHTTKATSWERPATPPLAVATPVVGNRELPLPPASTSWSSTIGSPSVPGGEL-PLAAGWEQKTTPTGEVYYVNHKTKSTTWERPVAP 560
GWE + G YYV+H T TTW+RP A ++ + N + G + +P P+ ++ G+ PLP GWE + T G V+YV+H T+AT+W P R+ + + S SST+ SV +L PL +GWE + T TG VY+V+H TK+TTW+ P P
Sbjct: 203 GWERRIDHLGRTYYVDHNTRTTTWNRPAVNATANNVELERQRHNERSLPGEQRNQSPA------QTPQTGLHISTQTTEGQGPLPPGWESRMTPEGRVYYVDHNTRATTWVDP-------------RRQQTVRMYNASSSSTVQQQSV--SQLGPLPSGWEMRLTSTGRVYFVDHNTKTTTWDDPRLP 369
BLAST of mRNA_F-serratus_M_contig113.1157.1 vs. uniprot
Match: A0A409XLI9_PSICY (E3 ubiquitin-protein ligase n=1 Tax=Psilocybe cyanescens TaxID=93625 RepID=A0A409XLI9_PSICY) HSP 1 Score: 99.4 bits (246), Expect = 8.950e-18 Identity = 65/192 (33.85%), Postives = 92/192 (47.92%), Query Frame = 3
Query: 3 GWEMKSTPAGEVYYVNHKTEETTWDRPVAPHAAASLAADPYAQNPPA--FGSCSSSTPLWSP---LPPNLPRPSAPAASAFQGGEPPLPEGWEMKTTASGEVFYVNHTTKATSWERPATPPLAVATPVVGNRELPLPPASTSWSSTIGSPSVPGGELPLAAGWEQKTTPTGEVYYVNHKTKSTTWERPVAPP 563
GWE ++ P G YYV+H T +TTW RP A+ P N PA S TP +P + P S P + + PLP GWE + T G ++V+H T+ T+W P A +TP +R + P +G PL +GWE + T TG VY+V+H T++T+W+ P PP
Sbjct: 251 GWERRTDPQGRTYYVDHNTRQTTWHRPTT-------ASQPSQANRPASQITQGPSRTPSTNPASSIAATSPAASTPVSQTGPYADIPLPLGWEERRTPEGRPYFVDHHTRTTTWTDPRR--AAQSTPAAESRPVTNP--------NLG---------PLPSGWEMRLTSTGRVYFVDHNTRTTSWDDPRLPP 416
BLAST of mRNA_F-serratus_M_contig113.1157.1 vs. uniprot
Match: A0A8K0U3J0_9AGAM (Uncharacterized protein n=1 Tax=Phlebopus sp. FC_14 TaxID=2615122 RepID=A0A8K0U3J0_9AGAM) HSP 1 Score: 99.0 bits (245), Expect = 1.160e-17 Identity = 62/186 (33.33%), Postives = 90/186 (48.39%), Query Frame = 3
Query: 3 GWEMKSTPAGEVYYVNHKTEETTWDRPVAPHAAASLAADPYAQNPPAFGSCSSSTPLWSPLPPNLPRPSAPAASAFQGGEPPLPEGWEMKTTASGEVFYVNHTTKATSWERPATPPLAVATPVVGNRELPLPPASTSWSSTIGSPSVPGGELPLAAGWEQKTTPTGEVYYVNHKTKSTTWERPVAP 560
GWE + +G YYV+H TTW RP P A S SS+P S P+P A S+ + PLP GWE + T G ++V+H T++T+W P + +A+A V S S ++++G PL +GWE + T TG VY+V+H T++TTW+ P P
Sbjct: 251 GWERRFDDSGRPYYVDHNNRRTTWHRPDPPQVAP-------------LASSQSSSPSIS-----FPQPQL-APSSGDYADVPLPAGWEERRTPEGRPYFVDHRTRSTTWNDPRSSQIALAATSV----------SASTNASLG---------PLPSGWEMRLTSTGRVYFVDHNTRTTTWDDPRLP 398
BLAST of mRNA_F-serratus_M_contig113.1157.1 vs. uniprot
Match: UPI0004449E68 (HECT-domain-containing protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI0004449E68) HSP 1 Score: 99.0 bits (245), Expect = 1.280e-17 Identity = 67/194 (34.54%), Postives = 97/194 (50.00%), Query Frame = 3
Query: 3 GWEMKSTPAGEVYYVNHKTEETTWDRPV-APHAAASLAADPYAQNPPAFGSCSSSTPLWSPLPPNLPRPSAPAASAFQGGEPPLPEGWEMKTTASGEVFYVNHTTKATSWERPATPPL-----AVATPVVGNRELPLPPAST--SWSSTIGSPSVPGGELPLAAGWEQKTTPTGEVYYVNHKTKSTTWERPVAP 560
GWE +S G YYVNH TTW+RP+ +A A P + + P S +SS + P + P+P P S + + PLP GWE + G ++V+H ++ T+WE P P A A+ V G+ P P A + + +G PL +GWE + T T VY+V+H TK+TTW+ P P
Sbjct: 296 GWERRSDARGRTYYVNHNERTTTWNRPLFTSNAGAQAVVTPASGSGP---SRTSSQQRRAQPPQSQPQPQQPHQSDSRYVDVPLPLGWEERRAPDGRPYFVDHHSRTTTWEDPRRPVFSASSAASASAVPGDGSSPHPSAEALATTRAALG---------PLPSGWEMRMTSTQRVYFVDHNTKTTTWDDPRLP 477
BLAST of mRNA_F-serratus_M_contig113.1157.1 vs. uniprot
Match: A0A0H2SK19_9AGAM (E3 ubiquitin-protein ligase n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2SK19_9AGAM) HSP 1 Score: 98.2 bits (243), Expect = 2.190e-17 Identity = 73/208 (35.10%), Postives = 98/208 (47.12%), Query Frame = 3
Query: 3 GWEMKSTPAGEVYYVNHKTEETTWDRPVAPHAA--------ASLAADPYAQNPPAFGSCSSSTPLWS------PLPPNLPRPSAPAASAFQG--------GEPPLPEGWEMKTTASGEVFYVNHTTKATSWERPATPPLAVATPVVGNRELPLPPASTSWSSTIGSPSVPGGELPLAAGWEQKTTPTGEVYYVNHKTKSTTWERPVAP 560
GWE +S P G YYV+H T TTW RP A A + A D + + A ++TP S P PP P++P+ + G G PLP GWE + T G +YV+H T+ T+W P + VVG P TS S+ S S G PL +GWE + T T +Y+V+H TK+TTW+ P P
Sbjct: 276 GWERRSDPLGRTYYVDHNTRTTTWHRPNANQAVNASNQQGETNAARDQHNRRLLADDMVEAATPNRSATASVAPPPPAHSGPASPSTTIVPGSGSSQTTSGTGPLPAGWEERYTPEGRPYYVDHNTRTTTWVDPRYQRIVR---VVG-------PNGTSTSAQPQSVSQLG---PLPSGWEMRLTSTARIYFVDHNTKTTTWDDPRLP 470
BLAST of mRNA_F-serratus_M_contig113.1157.1 vs. uniprot
Match: A0A165Q1W7_9AGAM (E3 ubiquitin-protein ligase n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165Q1W7_9AGAM) HSP 1 Score: 97.4 bits (241), Expect = 3.310e-17 Identity = 68/200 (34.00%), Postives = 91/200 (45.50%), Query Frame = 3
Query: 3 GWEMKSTPAGEVYYVNHKTEETTWDRPVAPHAAASLAADPYAQNPPAFGSCSSSTPLWSPLPPNLPRPSAPAASAFQGGEPPLPEGWEMKTTASGEVFYVNHTTKATSWERPATPPLAVATPVVGNRELPLPPASTSWSSTIGSPSVPGGEL-PLAAGWEQKTTPTGEVYYVNHKTKSTTWERPVAP--PAAVTPRVVHD 593
GWE++ P G YYV+H T TTW RP AP A PP S SS T P PS Q + LP+GWE + TA G ++V+H T+ T+W L P ++ S + + + G L PL +GWE + T G VY+V+H T++TTWE P P P A P+ D
Sbjct: 209 GWEVRFDPRGRAYYVDHNTHTTTWQRPAAPSNATPSV-------PPQRISTSSRT---------SPAPSDHHLQQ-QHADVRLPDGWEERRTAEGRPYFVDHNTRTTTW---------------------LDPRRSNLPSRLAATATSGTNLGPLPSGWEMRMTSVGRVYFVDHSTRTTTWEDPRVPTDPGADAPQYKKD 370 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig113.1157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig113.1157.1 >prot_F-serratus_M_contig113.1157.1 ID=prot_F-serratus_M_contig113.1157.1|Name=mRNA_F-serratus_M_contig113.1157.1|organism=Fucus serratus male|type=polypeptide|length=727bp MKSTPAGEVYYVNHKTEETTWDRPVAPHAAASLAADPYAQNPPAFGSCSSback to top mRNA from alignment at F-serratus_M_contig113:224304..232383- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig113.1157.1 ID=mRNA_F-serratus_M_contig113.1157.1|Name=mRNA_F-serratus_M_contig113.1157.1|organism=Fucus serratus male|type=mRNA|length=8080bp|location=Sequence derived from alignment at F-serratus_M_contig113:224304..232383- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig113:224304..232383- >mRNA_F-serratus_M_contig113.1157.1 ID=mRNA_F-serratus_M_contig113.1157.1|Name=mRNA_F-serratus_M_contig113.1157.1|organism=Fucus serratus male|type=CDS|length=4362bp|location=Sequence derived from alignment at F-serratus_M_contig113:224304..232383- (Fucus serratus male)back to top |