mRNA_F-serratus_M_contig1109.1024.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1109.1024.1 vs. uniprot
Match: D8LMA3_ECTSI (FtsJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA3_ECTSI) HSP 1 Score: 389 bits (1000), Expect = 6.700e-127 Identity = 239/498 (47.99%), Postives = 298/498 (59.84%), Query Frame = 3
Query: 399 GIARSGTSRYRQKLVLLEAKDPEEISRACIADPSLCRAILRVYLLGGGVCTSLEDVGKTLAAEVAAGKHAVPPSSSTPVGEEGGSFASTIAPLLVRVQALPKVMELQLIDEDSSFWNDNFPGLVRERQEGVFTHVLSVIFVRGAFLYGLAPASTHGRCLMENSNEDSAVCRAFYKIKEVTARAGICYDDKWTAIDMGSAPGGWTSFLSARCKRVLSVDPAELDPEVLALPNVVHVQQTIQAARSRLLYLLAGEKVQEKTAAGDREATPGNGADR----------------AREPAERSSDSLETPTARFPRDAAETALAEAEGV------------IGADIVVSDMNAEPRVVTDLLLSCLAAGLAKPGALLVATFKDFCGQ-KRMVDEVAGAISRLEAGTAA-------------DEAQTHVSFDSVQEGESGN-------SGLAVVAMSESPEAKCAVVGMGRDDAHFVTWSLERVRVLRLLSGGRAEQTIVARVA 1745
G ARSGTSRYRQKL LLEA+DP+E SR C++DPSLCR++LRVYLLGGG+CTSLEDVGK VME+QLIDE+++FW++NFP L RERQ G FTHVLS++F RGAFL+GLA A+THGR +++N+NED+AVCRA+YKIKEVT+RA + + + WTAID+G+APGGWTSFL+++C+RVLSVDPAELD VLALPNVVHVQ+ I+AA+ LL LLA E A +RE+ G G +R + P S S TP + EA + GA++VVSDMNAEP VV D+LLS ++AGLA+PGALLVATFKDFCG+ KRM DEVA A+ RL GT A G SGN +G + PE + A V ++ A W LE + ++LL+GGRAE TIVARVA
Sbjct: 2 GTARSGTSRYRQKLALLEARDPQEFSRRCVSDPSLCRSLLRVYLLGGGLCTSLEDVGKA-------------------------------------------VMEMQLIDEETTFWDENFPNLSRERQAGAFTHVLSLVFARGAFLWGLAQAATHGRSIIDNNNEDTAVCRAYYKIKEVTSRADLSFGEDWTAIDIGAAPGGWTSFLASKCRRVLSVDPAELDSAVLALPNVVHVQKLIEAAKGTLLDLLA-----EDAPAHERESRGGEGEERDDGGGRTHDGRLSGGGSFTPEASSLGSRLTPGGPIASAGSADTAGEASSMGANDRPTAPGKSQGAELVVSDMNAEPAVVADVLLSAMSAGLARPGALLVATFKDFCGRRKRMKDEVALAVERLRVGTFVVGGGASGVGEGDGGPAAAPCGGGPPNAGTSGNDADGGLEAGNGLSHAGTPPEGRVAGVACEKEGAEG-WWRLEGIETMKLLAGGRAEVTIVARVA 450
BLAST of mRNA_F-serratus_M_contig1109.1024.1 vs. uniprot
Match: A0A6H5JTM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM6_9PHAE) HSP 1 Score: 277 bits (708), Expect = 1.470e-86 Identity = 139/240 (57.92%), Postives = 163/240 (67.92%), Query Frame = 3
Query: 150 MVHAPKDQLAPCETHQFWREDPWTRPPCEWKESCSRTHLPHTGPGDPELRRTNIALQTENSQLSRVRVYAAEVLGSGGKASVTGIARSGTSRYRQKLVLLEAKDPEEISRACIADPSLCRAILRVYLLGGGVCTSLEDVGKTLAAEVAAGKHAVPPSSSTPVGEEGGSFASTIAPLLVRVQALPKVMELQLIDEDSSFWNDNFPGLVRERQEGVFTHVLSVIFVRGAFLYGLAPASTHGR 869
MVH K+ LA C+TH FW EDPW+RP CEW E C+ H GP DP L RTN+ALQTE+SQLSRVR YA+ VLG GG+AS TG ARSGTSRYRQKL LLEA+DP+E SR C++DPSLCR++LRVYLLGGG+C SLEDVGK VME+QLIDE+++FW+DNFP L RERQ G FTHVLS++F RGAFL+GLA A+THGR
Sbjct: 1 MVHVAKNTLAACQTHLFWLEDPWSRPACEWGEDCTFPHPKPEGPEDPGLLRTNVALQTESSQLSRVRAYASGVLGKGGEASDTGTARSGTSRYRQKLALLEARDPQEFSRRCVSDPSLCRSLLRVYLLGGGLCASLEDVGKA-------------------------------------------VMEMQLIDEETTFWDDNFPNLSRERQAGAFTHVLSLVFARGAFLWGLAEAATHGR 197
BLAST of mRNA_F-serratus_M_contig1109.1024.1 vs. uniprot
Match: A0A6H5JWK0_9PHAE (FtsJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK0_9PHAE) HSP 1 Score: 180 bits (456), Expect = 6.170e-48 Identity = 134/305 (43.93%), Postives = 168/305 (55.08%), Query Frame = 3
Query: 972 TAIDMGSAPGGWTSFLSARCKRVLSVDPAELDPEVLALPNVVHVQQTIQAARSRLLYLLAGE-----------KVQEKTAAGDREATPGNGADRAREPAERSSDSLETP-----TARFPRDAAETALAEAEGVI-------GADIVVSDMNAEPRVVTDLLLSCLAAGLAKPGALLVATFKDFCGQ-KRMVDEVAGAISRLEAGTAADEA----------------------QTHVSFDSVQEGESGNSGLAVVAMSESPEAKCAVVGMGRDDA-HFVTWSLERVRVLRLLSGGRAEQTIVARVA 1745
T ID+G+APGGWTSFL+++C+RVLSVDPAELDP VLALPNVVHVQQ I+AA L LLA + + +E+ G R N + P + S S TP +A A E + A G GA++VVSDMNAEP VV D+LLS ++AGLA+PGALLVATFKDFCG+ KRM DEVA A+ RL GTA + S + EG +GL+ PE + A V ++ A W LE + ++LL+GGRAE TIVARVA
Sbjct: 27 TQIDIGAAPGGWTSFLASKCRRVLSVDPAELDPAVLALPNVVHVQQLIEAAEGTLHELLAEDAPTHERECGCGEGEERDDGGGRTHDGRNSGGGSSTPEQSSLASRLTPGGPVASAGSADTADEASSMGANGRPAAPGKRGGAELVVSDMNAEPAVVADVLLSAMSAGLARPGALLVATFKDFCGRRKRMKDEVAVAVERLRVGTAIVDGGASGVGXXXXXXXXXXCGGGPPNAETSGNDADEGLEPGNGLSHAGTP--PEGRVAGVACEKEGAGEEGWWRLEEIETMKLLAGGRAEVTIVARVA 329
BLAST of mRNA_F-serratus_M_contig1109.1024.1 vs. uniprot
Match: A0A835YXR4_9STRA (FtsJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR4_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.390e-25 Identity = 76/212 (35.85%), Postives = 112/212 (52.83%), Query Frame = 3
Query: 528 LLGGGVCTSLEDVGKTLAAEVAAGKHAVPPSSSTPVGEEGGSFASTIA--PL---LVRVQALPKVMELQLIDEDS----SFWNDNFPGLVRERQEGV-FTHVLSVIFVRGAFLYGLAPASTHGRCLMENSNEDSAVCRAFYKIKEVTARAGICYDDKWTAIDMGSAPGGWTSFLSARCKRVLSVDPAELDPEVLALPNVVHVQQTIQAARSR 1133
++G TSL+++ L A V A E A IA PL +VR QA P+ +E +L+++ + + + R + F V SV++ +G F G+ P + ++ S + A CRAFYK++E T RAGI Y W A+DMG++PGGWT FLS R RV +VDP +D +VLALPNV +++ +QAA R
Sbjct: 220 MVGQATATSLQELQSKLLALVTAXXXXXXXXXXXSAPERPVVLACIIASVPLRLPVVRFQACPRSLEKELLNDHALAMKAIKEPKYKDFAALRLHPIDFELVASVVYTQGLFFAGVVPRAAWPGDIVAASIDAHAPCRAFYKLREATDRAGIAYQQNWNALDMGASPGGWTHFLSPRVARVFAVDPGSMDADVLALPNVTYLRAKVQAASER 431
BLAST of mRNA_F-serratus_M_contig1109.1024.1 vs. uniprot
Match: C1FIB9_MICCC (FtsJ domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FIB9_MICCC) HSP 1 Score: 83.2 bits (204), Expect = 4.720e-13 Identity = 108/389 (27.76%), Postives = 152/389 (39.07%), Query Frame = 3
Query: 102 CRFFHQND---CYRGDKCHMVHAPKDQLAPCETHQFW----REDPWTRPPCEWKESCSRTHLPHTGPGDPELRRTNIALQTENSQLSRVRVYAAEVLGSGGKASVTGIARSGTSRYRQKLVLLEA--KDPEEISRACIADPSLCRAILRVYLLGGGVCTSLEDVGKTLAAEVAAGKHAVPPSSSTPVGEEGGSFASTIAPLLVRVQALPKVMELQLIDE-DSSF--------WNDNFPGLVRERQEGV-----------------FTHVLSVIFVRGAF------LYGLAPASTH------GRCLMENSNEDSAVCRAFYKIKEVTARAGICYDDKWTAIDMGSAPGGWTSFLSARCK-----RVLSVDPAELDP--EVLALPNVVHVQ 1106
C+ F + D C R D C H P Q C T + RE+ P R PH P + +IALQ E RV E+LG+ +V G AR+ SR LVL+ A + +R D L I R Y G + + G V + ++ VG++ + +T+ + L +++ L E DSSF + +V E E TH L V+ VRG L P S G + + A+CRAF+KI+E TARAG+ + W +D+G+APGGWT +L AR V +VDPAEL PNV H++
Sbjct: 46 CKRFCRADGGSCARPD-CPDAHVPIAQRQTCWTLDRYGVCAREEARRADP-----KAPRCWFPHPVPPPADH---HIALQVEVGMSDRVVSRCRELLGAD---AVVGAARADLSRNGDVLVLVTAGHRGVANAARILADDEHLAARIKRAYATGANHAADRKGDERN----ERGGDEGVLFADASVVGDDADALDATLR------EKLASLVDAALGGEKDSSFAARIRVRCFPPRLRDVVLEALEARPVLGGSHGWETCARVDDATHALDVVAVRGRAHVTVWSLDRTGPDSLRAWLMDAGEAARKRRTDAGAMCRAFHKIEEATARAGVAIERTWRCVDVGAAPGGWTQWLCARLDAACGGEVFAVDPAELGDFKNGRLPPNVTHLK 412
BLAST of mRNA_F-serratus_M_contig1109.1024.1 vs. uniprot
Match: A0A087SR67_AUXPR (FtsJ domain-containing protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SR67_AUXPR) HSP 1 Score: 80.5 bits (197), Expect = 8.280e-13 Identity = 63/231 (27.27%), Postives = 95/231 (41.13%), Query Frame = 3
Query: 780 QEGVFTHVLSVIFVRGAFLYGLAPASTHGRCLM-ENSNEDSAVCRAFYKIKEVTA------RAGICYDDKWTAIDMGSAPGGWTSFLSARCKRVLSVDPAELDPEVLALPNVVHVQQTIQAARSRLLYLLAGEKVQEKTAAGDREATPGNGADRAREPAERSSDSLETPTARFPRDAAETALAEAEGVIGADIVVSDMNAEPRVVTDLLLSCLAAGLAKPGALLVATFKDF 1451
Q FTHVL V+ Y ++P R + +C+A K+ E A R G+ AID+G++PGGW++ L++ V+S+DPA++ PE LALPN+ H++ ++ A ++ E ALA A GAD++VSDMN P + ++ LA KPG L+ T K F
Sbjct: 116 QPAAFTHVLDVVETAAGVAYSMSPCPRLFRTTAWTRPRLEGPLCKATSKLAEALAWVKHAPRGGV-------AIDLGASPGGWSTLLASSMHHVISIDPADMAPEALALPNLTHIKSRVETALPQI----------------------------------------------------EAALAAAGAGGGADLLVSDMNKHPSAMIGMVEPLLA--YLKPGGHLLLTLKFF 285
BLAST of mRNA_F-serratus_M_contig1109.1024.1 vs. uniprot
Match: A0A7S0J109_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J109_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 4.540e-11 Identity = 66/209 (31.58%), Postives = 90/209 (43.06%), Query Frame = 3
Query: 891 EDSAVCRAFYKIKEVTARAGIC-YDDKWTAIDMGSAPGGWTSFLS-ARCKRVLSVDPAELDPEVLALPNVVHVQQTIQAARSRLLYLLAGEKVQEKTAAGDREATPGNGADRAREPAERSSDSLETPTARFPRDAAETALAEAEGVIGADIVVSDMNAEPRVVTDLLLSCLAAGLAKPGALLVATFKDFCGQKRMVDEVAGA-ISRLEA 1508
++S VCRA +KI+EV AR + TAID+G+APGGWTS+L+ A C V+++DP EL + P V H++ +Q A L A + AD+ DMNAEP +V LLL A L KPGA L+ TFK+ +K D A ++RL A
Sbjct: 191 DESPVCRAAHKIREVAARELLRPLGASSTAIDVGAAPGGWTSYLADAGCAEVIAIDPGELRLGQVPRPAVKHMRMKLQDALPML---------------------------------------------------------RARPNLAADLYCCDMNAEPSMVVSLLLE--AVPLLKPGAQLLLTFKNVFPKKAAWDAARDAQLARLRA 340
BLAST of mRNA_F-serratus_M_contig1109.1024.1 vs. uniprot
Match: A0A497J5Y0_9ARCH (THUMP domain-containing protein n=2 Tax=Candidatus Hydrothermarchaeota archaeon TaxID=2250275 RepID=A0A497J5Y0_9ARCH) HSP 1 Score: 72.8 bits (177), Expect = 3.000e-10 Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 3
Query: 888 NEDSAVCRAFYKIKEVTARAGICYDDKWTAIDMGSAPGGWTSFLSARCKRVLSVDPAELDPEVLALPNVVHVQQTIQ 1118
+E + RA KI+E+ R + + T +D+G+APGGW+ +S R K+V++VDPAELD EV + NVVH+++ Q
Sbjct: 164 HEKRPISRAEQKIREIIKRYPFVFSKEKTVLDIGAAPGGWSREMSKRVKKVIAVDPAELDEEVREIKNVVHIKKKAQ 240
BLAST of mRNA_F-serratus_M_contig1109.1024.1 vs. uniprot
Match: A0A8J5XDG9_DIALT (FtsJ domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDG9_DIALT) HSP 1 Score: 73.9 bits (180), Expect = 3.580e-10 Identity = 77/315 (24.44%), Postives = 129/315 (40.95%), Query Frame = 3
Query: 306 NIALQTENSQLSRVRVYAAEVLGSGGKA---SVTGIARSG-TSRYRQKLVLLEAKDPEEISRACIADPSLCRAILRVYLLGG---GVCTSLEDVGKTLAAEVAAGKHAVPPSSSTPVGEEGGSFASTIAPLLVRVQALPKVMELQLIDEDSSFWNDNFPGLVRERQEGVFTHVLSVIFVRGAFLYGLAPASTHGRCLMENSNEDSAVCRAFYKIKEVTAR-------------------------AGICYDDKWT----AIDMGSAPGGWTSFLSAR-CKRVLSVDPAELDPEVLALPNVVHVQQTIQAARSRLL 1139
N+ LQ +S R+ Y A SG A + G++ + + V L + P E++ A + DP L + RV + G+ ++ ++ + L E G A+ R+ P+ + +L D + G+ E + G THV+++ + G +G+ PA +G +++ D+A RA+YK++E AG A+D+G+APGGWTS L V +VDPAELD +VL LP V H++ + A + +L
Sbjct: 148 NVLLQCPHSHAQRIAAYCA----SGALAVRCTPAGLSEPPWEGKGLDRCVALACERPCELALAAVRDPFLSSVVGRVLIAPERTVGLDAAMGEIARAL--------------------ERAGVRAA-------RLITHPRALAERLTDAVEA------AGVRLEPKRGRHTHVVALAWANGPLAWGVEPAEAYGFKDLDSFLADAATSRAYYKLREALVMHFGAAAXXXXXXXXXXXXXXXPAEGAGRAVAPPLLRGLRAVDVGAAPGGWTSCLIEHGAAHVTAVDPAELDAQVLVLPGVAHMRMRAEEAAAAML 425
BLAST of mRNA_F-serratus_M_contig1109.1024.1 vs. uniprot
Match: A0A059LME3_9CHLO (FtsJ domain-containing protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LME3_9CHLO) HSP 1 Score: 72.4 bits (176), Expect = 6.170e-10 Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 3
Query: 792 FTHVLSVIFVRGAFLYGLAPASTHGRCL-MENSNEDSAVCRAFYKIKEVTARAGICYDDKWT-------AIDMGSAPGGWTSFLSARCKRVLSVDPAELDPEVLALPNVVHVQQTIQAARSRL 1136
F H+L V+ + Y L ST R + + +A RA K++E A A WT AID G+APGGWT+ L++R K V++VDPA LDP V+AL NV HV+ + A + +
Sbjct: 152 FAHLLDVVSLDDGLRYFLRKESTLFRSTALTPPRQANAPSRAPGKLEEALAMAA------WTPPPGGGAAIDAGAAPGGWTAALASRVKAVVAVDPAALDPAVIALSNVAHVRDEAENAGAEI 268 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1109.1024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1109.1024.1 >prot_F-serratus_M_contig1109.1024.1 ID=prot_F-serratus_M_contig1109.1024.1|Name=mRNA_F-serratus_M_contig1109.1024.1|organism=Fucus serratus male|type=polypeptide|length=566bp MENGRVRDGPSRPRSKKPCRFFHQNDCYRGDKCHMVHAPKDQLAPCETHQback to top mRNA from alignment at F-serratus_M_contig1109:204084..212825- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1109.1024.1 ID=mRNA_F-serratus_M_contig1109.1024.1|Name=mRNA_F-serratus_M_contig1109.1024.1|organism=Fucus serratus male|type=mRNA|length=8742bp|location=Sequence derived from alignment at F-serratus_M_contig1109:204084..212825- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1109:204084..212825- >mRNA_F-serratus_M_contig1109.1024.1 ID=mRNA_F-serratus_M_contig1109.1024.1|Name=mRNA_F-serratus_M_contig1109.1024.1|organism=Fucus serratus male|type=CDS|length=3396bp|location=Sequence derived from alignment at F-serratus_M_contig1109:204084..212825- (Fucus serratus male)back to top |