mRNA_F-serratus_M_contig1109.1022.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1109.1022.1 vs. uniprot
Match: D8LMA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA1_ECTSI) HSP 1 Score: 402 bits (1033), Expect = 5.630e-124 Identity = 363/737 (49.25%), Postives = 449/737 (60.92%), Query Frame = 3
Query: 96 AILAAVDIAAAPG-------TPS------GHNDVDTCVQLQALGEIHSHKVRTLMRSISELKKKLALATAQGKDHRRSAMIRAMKVRLREQELVVDVVKEELGKKAGMGKEETNDWVIRKTVGGPLRFRPKTREELQNELYQLEKKHRQALEKLKARRTGHDAVKRVCPEAEGTQSGTSAIAGN---EGSVSALGNTPEQ-STVELVRLSDALEEADALRVAVRSRDATLQAQGDAMDKLQTENRELRGLRERLCRKERRMSELKRKNAELGEKYTSLLEDYEAGQDQMQHLKAQLELRNEKIAAESEAFRVQSLRQAEEVSVLLGREEELATALEEEAAARGRERNGNRQSAMQAKQRAEAAEKAQEETASQEKNLREKNTAMIAELQRLGKDAAEAAALRASTQELTRDVKRLTQEGEARQERLEEAREKSXXXXXXXXXXXXXXXXXTASKDSLAQEFGEVQESWRQERILRETEREKLEEEVEAXXXXXXXXXXXXXXXXXXXADTANTPPEAEDISAPVGEDERQNGEECRDESWGSIGERERAGKERIQSTEMMVPAGESRPSLDKRRAVR--LSEAQALIQEMAFELEEQAEHIASLEEEKQAVELQRASAIKAVEELQAQMTAMKKKLNAIGQARRDISGDGDDEAGGPPSAQP-------------PARRIRSSVSAEDNERKLREGLAASRASEKAALRKLEKVRLDLDDAKASYEEQKTRVENLVA 2210
AILAA+D+ AAP TP G ++ D VQLQAL +IH+ KVR+LMRS++ELKK+LALATAQGKDHRRSAMIRAM+ RLREQ+LVVDV+KEELG K GMGKEETNDWVIRKTVGGPLRFRPKTREELQNELY+LE+K+RQAL+KLK RRTG D EG GT+ EG +T +Q ST EL+RLS+ALEE DALRV+VRSRDA LQAQ +A+D+LQ E R+LRG++E+L RKERR ELKRK+A LGE++T+LLED+EA Q+Q+ HLKAQL LR E+ AE++ FR QSLRQAEEV VLL REEEL+TALEEE A+R + QA RAEAAEK+ + + QE LREKN M+AELQRLGK+A EAA EARQ RLEEAR+K XXXXXXXXXXXXXX E++ ++ L E E++ XXXXXXXXXXXXXXXXXXX G+ D + L+E++ +I+EM EL EQA+ + SLEEE+QA++LQ SA KA ++L A+ A+ +L A A AG A+P P R +R SAE+ E +L E L A++A++KAA + ++L+L D KAS + K RV+ LVA
Sbjct: 14 AILAAMDLGAAPVPAGLLGMTPGRDPPYPGSSNDDMPVQLQALTKIHAQKVRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVIKEELGLKTGMGKEETNDWVIRKTVGGPLRFRPKTREELQNELYRLERKYRQALDKLKTRRTGGDRD-------EGGVVGTTEERSRVELEGQGXXXXDTDQQASTRELMRLSEALEEVDALRVSVRSRDAALQAQAEAIDQLQLEKRDLRGVQEKLGRKERRARELKRKHANLGEQHTALLEDFEASQEQVDHLKAQLALRKEEALAEADEFREQSLRQAEEVGVLLKREEELSTALEEEVASRXXXXXXXXHADRQAVARAEAAEKSLQVSVKQETRLREKNKTMMAELQRLGKEAGEAAXXXXXXXXXXXXXXXXXXXAEARQGRLEEARQKGATAXXXXXXXXXXXXXXXXXXXXXXXXXXEMKVLLGEKLALLEAEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXGGDKDTERDDEAGKKFDLTESEEIIEEMESELREQADRVFSLEEEQQALKLQLESAKKAADDLSAKNAALTAQLKAA-PATSPADPAAAVTAGAETEAEPASSRKLEESIPGSPRRPLRPCSSAEEKEWQLGEELVAAKAAKKAAQNECVALKLELQDGKASGDLHKARVKALVA 732
BLAST of mRNA_F-serratus_M_contig1109.1022.1 vs. uniprot
Match: A0A2D4C1R3_PYTIN (Aa_trans domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1R3_PYTIN) HSP 1 Score: 134 bits (336), Expect = 3.050e-28 Identity = 112/325 (34.46%), Postives = 183/325 (56.31%), Query Frame = 3
Query: 120 AAAPGTPSGHNDVDTCVQLQALGEIHSHKVRTLMRSISELKKKLALATAQGKDHRRSAMIRAMKVRLREQELVVDVVKEELGKKAGM---GKEETNDWVIRKTVGGPLRFRPKTREELQNELYQLEKKHRQALEKLKARRTGHDAVKRVCPEAEGTQSGTSAIAGNEGS--------VSALGNTPEQSTVELVRLSDAL-EEADALRVAVRSRDATLQAQGDAMDKLQTENRELRGLRERLCRKERRMSELKRKNAELGEKYTSLLEDYEAGQDQMQHLKAQLELRNEKIAAESEAFRVQSLRQAEEVSVLLGREEELATALEEE 1058
A+A GT S D+ +L A+ +H KVR+LMRSI++L++++ Q K+HRRSA+I++++ REQEL++D++K+ L +K +E ND++++K VG PLRFRPKTREEL+NEL L+ K+++A+E L+ VK A T G +IA ++ VS + +Q +V +L EE D L+V + S+ T+ Q D + +L E +LR L ERL RK+++++ L+ K ++L + LL + E ++ L+ QL+ E + A ++ + E++ L RE EL LEE+
Sbjct: 63 ASAAGTRSVTPDLALDAKLTAMKTVHDQKVRSLMRSINQLQEQIQQLKTQDKEHRRSALIQSLRQSQREQELLIDILKQTLAEKVPEFQESRELVNDFILKKAVGAPLRFRPKTREELENELEVLDGKYKRAVENLQK-------VKEDASRAPATARGQRSIAESKRDDEDESPAIVSRQQASQQQPVAPVVITDPSLQEEIDRLKVELASKAMTIHTQADELHELMGELDKLRILEERLERKQQKITLLEDKVSQLQQDNVKLLHEKEVETEKNAELQEQLQFIRESRVEDGTATDIERRQLLEKLQQSLARESELQNDLEEQ 380
BLAST of mRNA_F-serratus_M_contig1109.1022.1 vs. uniprot
Match: A0A6G0XT65_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XT65_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.450e-26 Identity = 101/296 (34.12%), Postives = 158/296 (53.38%), Query Frame = 3
Query: 180 ALGEIHSHKVRTLMRSISELKKKLALATAQGKDHRRSAMIRAMKVRLREQELVVDVVKEELGKKAGMGKEE---TNDWVIRKTVGGPLRFRPKTREELQNELYQLEKKHRQALEKLKARRTGHDAVKRVCPEAEGTQSGTSAIAGNEGSVSALGNTPEQSTVELVRLSDALEEADALRVAVRSRDATLQAQGDAMDKLQTENRELRGLRERLCRKERRMSELKRKNAELGEKYTSLLEDYEAGQDQMQHLKAQLELRNEKIAAESEAFRVQSLRQAEEVSVLLGREEELATALEEE 1058
AL IHS KVR LM+SI +L++++A Q K+HRRSA+I++++ + REQ+L+VDV+KE L K +++ N+++++KT+ GP RFRPKTREEL+ E +L+KK+++ L LK +T R+ E TP + ELV + LE LRVA +++ LQAQ D +D L+ EL + ++L R + + S K +L + L++D E ++ Q L+A+L E + + E V L RE EL T LE++
Sbjct: 71 ALHNIHSQKVRALMKSIHQLQEQVATMKTQDKEHRRSALIQSLRKKQREQDLLVDVLKETLQAKVSEFQDDPNLVNEFILKKTISGPKRFRPKTREELELEFAELDKKYKRTLASLKKAKTEMPQTPRIQESEE--------------------RTPAEPGPELVAMQKELE---TLRVAAAAKEIALQAQQDQIDGLRKRLEELHLVEDKLERTKTKYSASKEAIKKLQDDAIRLIQDKECESERRQQLEAELAFYKEATDTSEKNGDKVKMELMERVKALHAREAELLTQLEDQ 343
BLAST of mRNA_F-serratus_M_contig1109.1022.1 vs. uniprot
Match: A0A482SHG0_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHG0_9ARCH) HSP 1 Score: 112 bits (280), Expect = 6.230e-24 Identity = 93/251 (37.05%), Postives = 144/251 (57.37%), Query Frame = 3
Query: 111 VDIAAAPGTPSGHNDVDTCVQLQALGEIHSHKVRTLMRSISELKKKLALATAQGKDHRRSAMIRAMKVRLREQELVVDVVKEELGKKAGMGKEETNDWVIRKTVGGPLRFRPKTREELQNELYQLEKKHRQALEKLKARRTGHDAVKRVCPEAEGTQSGTSAIA-GNEGSVSALGNTPEQSTVE-LVRLSDALEEADALRVAVRSRDATLQAQGDAMDKLQTENRELRGLRERLCRKERRMSELKRKNAEL 857
+D+A A P G D + QAL + K++ LM S+ K++A KD+RR+ MI+A++ ++++ EL+ DVVKEEL +K M E+ N+++++KT+GGP RFRP TREEL+N++Y+LEKK L K D V EA+ T T+A A G+ +VS + +QS + LV + LEE LR+ VR+RDA Q + + +L + N EL +E + E+ + L+ KN+ L
Sbjct: 11 LDMATALELPLG---ADNEAKFQALKNLQLKKIKQLMASLDLKDKEIAKLKITTKDNRRTQMIQALRNKIKDLELINDVVKEELSRKGEMPLEQVNEYIMKKTLGGPKRFRPLTREELENKIYELEKK----LNKKVTTAPTSDVSNNVA-EAKRTDEDTTAQAKGSSRTVSNRYDAEKQSEMSSLVDAAALLEELQRLRIEVRARDAVADKQREEITRLLSRNAELVAAQEEVSYLEQEIGGLQDKNSLL 253
BLAST of mRNA_F-serratus_M_contig1109.1022.1 vs. uniprot
Match: A0A8K1CM85_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM85_PYTOL) HSP 1 Score: 117 bits (293), Expect = 8.730e-24 Identity = 99/311 (31.83%), Postives = 177/311 (56.91%), Query Frame = 3
Query: 153 DVDTCVQLQALGEIHSHKVRTLMRSISELKKKLALATAQGKDHRRSAMIRAMKVRLREQELVVDVVKEELGKKAGM---GKEETNDWVIRKTVGGPLRFRPKTREELQNELYQLEKKHRQALEKLKARRTGHDAVKRVCPEAEGT----QSGTSAIAGNEGSVSALGNTPEQSTVELVRLSDAL--EEADALRVAVRSRDATLQAQGDAMDKLQTENRELRGLRERLCRKERRMSELKRKNAELGEKYTSLLEDYEAGQDQMQHLKAQLELRNEKIAAESEAFRVQSLRQAEEVSVLLGREEELATALEEE 1058
D+ + +L A+ H KVRTL+RSI++L++++ +Q K+HRRSA+I+ ++ REQE+++D++K+ L K +E N+++++K+VGGP+RFRPK+REEL+NEL L+ K+++A+E LK + +A R E + Q S +GSV S VE ++D EE D L+V + S+ T+ +Q D +++L LR L E++ RK+ +++ L+ K + + + SL+ + E+ ++ ++ +L+ + + + + LRQ E + L RE EL LE++
Sbjct: 64 DMTSGAKLTAIKSAHDQKVRTLLRSINQLQEQIQTLKSQDKEHRRSALIQNLRKSQREQEMLIDILKQTLLDKVPEFQESRELVNEYILKKSVGGPMRFRPKSREELENELEVLDNKYKRAVENLKKAK---EARPRPATETDRRNKRQQQPESDEEVEDGSVDVRSRV---SIVEKEVVTDPALQEEIDQLKVELASKTMTIHSQVDEINELYAXXERLRVLEEKVERKKEKIAVLEEKVSSMQLEQVSLVHEKESEMEKRLQVEEELQFVRDTRIEDVQTSDNERLRQLELIQSLRARETELQNQLEDQ 368
BLAST of mRNA_F-serratus_M_contig1109.1022.1 vs. uniprot
Match: A0A7S1C3S2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3S2_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.100e-23 Identity = 60/110 (54.55%), Postives = 82/110 (74.55%), Query Frame = 3
Query: 171 QLQALGEIHSHKVRTLMRSISELKKKLALATAQGKDHRRSAMIRAMKVRLREQELVVDVVKEELGKKAGMGKEETNDWVIRKTVGGPLRFRPKTREELQNELYQLEKKHR 500
+L+A +H+ KVR+LM+SI+ L+ K+A TA+ KDHRRS I+A+K ++RE EL DV+K EL + GM EE D+V+RKTVGGP RFRPKTREEL+ ++ LEK+ R
Sbjct: 6 KLRAQERMHAQKVRSLMKSIATLRDKVATLTAESKDHRRSGQIQALKGKVREAELASDVLKAELRDRLGMTAEEVADFVVRKTVGGPKRFRPKTREELELQVSSLEKRVR 115
BLAST of mRNA_F-serratus_M_contig1109.1022.1 vs. uniprot
Match: W2RBF8_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RBF8_PHYPN) HSP 1 Score: 116 bits (291), Expect = 1.470e-23 Identity = 102/301 (33.89%), Postives = 161/301 (53.49%), Query Frame = 3
Query: 180 ALGEIHSHKVRTLMRSISELKKKLALATAQGKDHRRSAMIRAMKVRLREQELVVDVVKEELGKKAGMGKEE---TNDWVIRKTVGGPLRFRPKTREELQNELYQLEKKHRQALEKLKARRTGHDAVKRVCPEAEGTQSGTSAIAGNEGSVSALGNTPEQSTVELVRLSDALEEADALRVAVRSRDATLQAQGDAMDKLQTENRELRGLRERLCRKERRMSELKRK-------NAELGEKYTSLLEDYEAGQDQMQHLKAQLELRNEKIAAESEAFRVQSLRQAEEVSVLLGREEELATALE 1052
AL +H KVR LMRSI++L+++L AQ K+HRRSA+I+ ++ + REQEL++DV+K+ L +K ++ ND+V++KT GGP+RFRPKTREEL+NEL L + ++ +EKLK D+ + P+ E N P EE + LR V S+ T+ AQ + M ++ TE +LR + +++ RK+ +++ L+ + N EL ++ L E Y Q++ Q L+ ++ E A+ E + L+Q E + L RE EL LE
Sbjct: 78 ALKTVHEQKVRALMRSINQLQEQLQGLKAQEKEHRRSALIQDLRTQQREQELLIDVLKQTLQEKVSEFQDSRALVNDFVLKKTAGGPMRFRPKTREELENELQTLGQNFQRTVEKLK-----QDSQRNAAPKEEKPYENDQXXXXXXXXXXXDTNNPTADAA-------LYEELEQLRAQVASKSVTIHAQAEEMTEVYTELDKLRVVEDQIVRKKHKIALLREQLERQQADNVELVQEKEELAEKYLQLQEETQFLR---DITMEDAGAKDE----ERLQQLELIQTLRSRELELQDELE 359
BLAST of mRNA_F-serratus_M_contig1109.1022.1 vs. uniprot
Match: A0A5D6Y320_9STRA (Aa_trans domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y320_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.270e-22 Identity = 97/240 (40.42%), Postives = 141/240 (58.75%), Query Frame = 3
Query: 171 QLQALGEIHSHKVRTLMRSISELKKKLALATAQGKDHRRSAMIRAMKVRLREQELVVDVVKEELGKKAG---MGKEETNDWVIRKTVGGPLRFRPKTREELQNELYQLEKKHRQALEKLKARRT-----GHDAVKR----VCPEAEGTQSGTSAIAGNEGSVSALGNTPEQSTVELVRLSDAL-EEADALRVAVRSRDATLQAQGDAMDKLQTENRELRGLRERLCRKERRMSELKRKNA 851
+LQAL +H KVR LM+SI++L+++L AQ K+HRRSA+I+ ++ LREQELV DV+K+ L +K + N +V +K VGGPLRFRPKTREEL++EL QL+ K+R+AL L+ T G A R C E G ++ A+ LG E+ + +L AL EE + LR+ + S+ T+ AQ D + L E LR + ++L RK+RR++ L+ K A
Sbjct: 64 RLQALKSVHEQKVRALMKSINQLQEQLQALRAQDKEHRRSALIQGLRQSLREQELVADVLKQTLAEKLPEFRASRALVNAFVAQKCVGGPLRFRPKTREELESELEQLDTKYRKALGSLRVSATEREQRGAQAKDRDSEAKCRETRGGRAEDDALM--------LG---EEESGDLCVPPPALQEEVERLRIELSSKAVTIHAQADEVALLYAEIDTLRVVHDKLERKKRRVALLEDKLA 292
BLAST of mRNA_F-serratus_M_contig1109.1022.1 vs. uniprot
Match: A0A8J5M0G0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M0G0_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.460e-22 Identity = 100/302 (33.11%), Postives = 169/302 (55.96%), Query Frame = 3
Query: 180 ALGEIHSHKVRTLMRSISELKKKLALATAQGKDHRRSAMIRAMKVRLREQELVVDVVKEELGKKAGMGKEE---TNDWVIRKTVGGPLRFRPKTREELQNELYQLEKKHRQALEKLKARRTGHDAVKRVCPEAEGTQSGTSAIAGNEGSVSALGNTPEQSTVELVRLSDAL-EEADALRVAVRSRDATLQAQGDAMDKLQTENRELRGLRERLCRKERRMSELKRK-------NAELGEKYTSLLEDYEAGQDQMQHLKAQLELRNEKIAAESEAFRVQSLRQAEEVSVLLGREEELATALE 1052
AL +H KVR LMRSI++L++++ AQ K+HRRSA+I+ ++ + REQ+L++DV+K+ L +K ++ ND+V++K+ GGP+RFRPKTREEL+NEL L + ++ +EK K D+ + P+ E G+E ++ N Q+ V +AL EE + LR + S+ T+ AQ + M ++ E +L + +++ RK+ +++ L+ + N EL ++ L E Y Q++ Q L+ ++ E A+ E + L+Q E + +L RE EL LE
Sbjct: 78 ALKAVHEQKVRALMRSINQLQEQIQGLKAQEKEHRRSALIQDLRTQQREQDLLIDVLKQTLQEKVSEFQDSRALVNDFVLKKSAGGPMRFRPKTREELENELQALGQNFQRTVEKFK-----QDSQRNAAPKEEKPHDSDK---GDEDEMTEEKNATNQN----VAADEALYEELEQLRAQLASKSVTIHAQAEEMAEVYAELDKLTVVEDQIVRKKHKIALLREQLERQQADNVELVQEKEELAEKYLQLQEETQFLR---DITMEDAGAKDE----ERLQQLELIQMLHSRELELQDELE 360
BLAST of mRNA_F-serratus_M_contig1109.1022.1 vs. uniprot
Match: A0A1V9Z379_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z379_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.940e-22 Identity = 85/243 (34.98%), Postives = 146/243 (60.08%), Query Frame = 3
Query: 177 QALGEIHSHKVRTLMRSISELKKKLALATAQGKDHRRSAMIRAMKVRLREQELVVDVVKEELGKKAGMGKEE---TNDWVIRKTVGGPLRFRPKTREELQNELYQLEKKHRQALEKLKARRTGHDAVKR-VCPEAEGTQSGTSAIAGNEGSVSALGNTPEQSTVELVRLSDALEEADALRVAVRSRDATLQAQGDAMDKLQTENRELRGLRERLCRKERRMSELKRKNAELGEKYTSLLEDYE 893
QAL IHS KVR+LM+SI +L+++++ +Q K+HRRSA+I++++ + REQ+L++DV+KE L KA ++ N+++++KT+GGP RFRPKTREEL+ E +L+KK+++AL+ K + G A K P + ++ S + V A G +Q E ++ EE D LR+ + S+D L AQ ++ LQ + +L ++++ R + + + K +L E L+++ E
Sbjct: 62 QALNNIHSQKVRSLMKSIHQLQEQVSAMQSQDKEHRRSALIQSLRKKQREQDLLIDVLKESLATKAPEFQDSIPLVNEFILKKTLGGPKRFRPKTREELELEFLELDKKYKRALQNAKLAKQGQAAKKADEVPAQDDPETVESDVVDQ---VIASGAEFKQFR-EYQEITALREEVDRLRITIASKDVNLNAQLQQIELLQQQVAQLLTIQDKFERTKAKYTASKEALEKLEEDAIRLVQEKE 300 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1109.1022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1109.1022.1 >prot_F-serratus_M_contig1109.1022.1 ID=prot_F-serratus_M_contig1109.1022.1|Name=mRNA_F-serratus_M_contig1109.1022.1|organism=Fucus serratus male|type=polypeptide|length=742bp MLRARSNAECDSAILAAVDIAAAPGTPSGHNDVDTCVQLQALGEIHSHKVback to top mRNA from alignment at F-serratus_M_contig1109:162263..172272- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1109.1022.1 ID=mRNA_F-serratus_M_contig1109.1022.1|Name=mRNA_F-serratus_M_contig1109.1022.1|organism=Fucus serratus male|type=mRNA|length=10010bp|location=Sequence derived from alignment at F-serratus_M_contig1109:162263..172272- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1109:162263..172272- >mRNA_F-serratus_M_contig1109.1022.1 ID=mRNA_F-serratus_M_contig1109.1022.1|Name=mRNA_F-serratus_M_contig1109.1022.1|organism=Fucus serratus male|type=CDS|length=4452bp|location=Sequence derived from alignment at F-serratus_M_contig1109:162263..172272- (Fucus serratus male)back to top |