mRNA_F-serratus_M_contig1105.983.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1105.983.1
Unique NamemRNA_F-serratus_M_contig1105.983.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1105.983.1 vs. uniprot
Match: D8LJS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS3_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 1.650e-158
Identity = 278/455 (61.10%), Postives = 345/455 (75.82%), Query Frame = 1
Query:  673 MLALMLPRGFPDSTRFPYAQYSTWQFMGMAASAAAGVMSTQALLFAVGLGAGSIPLAAALNWVIKDGLGQLGGVAFSSLVNTRFDSNPRLWRMIAAVSLDLSTMLELLSPLAPGYFLLIASVANVGKNVSFLAASASRAAIHNMLAAKGNLADVTAKAGAQTIVACMVGTGVGIVLSSLLGTDIRAILPTCLLLSTFHLSAIYISVRRLGVPTFDTQRLGLVVDAY---HRSHTMPTYQELAERERFVSYTLSEQLGLDESPKATVGSRLEEAVRDREELEQICQACDGLPFLLSIRGDLSAGTGEVHVLLLEGCGPREVLAGGYLAHLARSVLIERALQRPRWKNLPPL--PGAKSLSPLGELLPDLIVEALRRGAM---SPTR--NPLVS-------------GEA-SLQE----SRRG--IAADFISSAESAGWNTSVVFLERPGAARLRLI 1947
            ML L+LP GFP S   PY  Y+ WQF GMAASAAAGVMSTQALL+A+GLGAG++PLAA LNWVIKDGLGQLGGVAFSSLV+TRFD+NP+LWR++AAVSLD S +LELLSPLAP YFL IASVAN+GKNVSFLAASASRAAIHN+L+ KGNLADVTAK+GAQTI+ACM GTG G+ LS+ LG++  AI+P CL LS  HL A ++S+RRLG+PTFD QRL LVV+      RS  MP+ Q++A +E  V+Y + E++GLD SP   VGSRL+EAV+   ELE++C+ C+GLPFLLS+RGDL+  TGEVHVLLLEGCG REVLAG Y+A +A+ +L+ER L+R R +        G K ++P G++LP++I EALR+GA    SP    +P+VS             GEA +LQE    +R G  IA +  + AE +GWNTS +FLE+ GA RLRL+
Sbjct:    1 MLGLVLPSGFPASVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGLGAGALPLAATLNWVIKDGLGQLGGVAFSSLVSTRFDANPKLWRVVAAVSLDASMVLELLSPLAPAYFLPIASVANIGKNVSFLAASASRAAIHNVLSLKGNLADVTAKSGAQTILACMAGTGAGVTLSASLGSEFHAIVPACLCLSVVHLGANHMSMRRLGIPTFDHQRLELVVNGMADGDRSRGMPSPQDIAAQEDVVAYAVREKIGLDLSPTVVVGSRLKEAVKGWGELEELCRVCEGLPFLLSVRGDLAHRTGEVHVLLLEGCGAREVLAGSYVALVAKRLLLERGLRRSRGRRRAGTLTRGGKEVAPTGDILPEVIEEALRQGAALLASPPAPPSPIVSSSPTDTQGGQEEVGEAPTLQEQGDAARHGRMIARELSARAERSGWNTSALFLEKAGAVRLRLV 455          
BLAST of mRNA_F-serratus_M_contig1105.983.1 vs. uniprot
Match: A0A6H5L0I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I8_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 3.300e-157
Identity = 275/473 (58.14%), Postives = 349/473 (73.78%), Query Frame = 1
Query:  622 PTRSLGLEHEMRHRAEAMLALMLPRGFPDSTRFPYAQYSTWQFMGMAASAAAGVMSTQALLFAVGLGAGSIPLAAALNWVIKDGLGQLGGVAFSSLVNTRFDSNPRLWRMIAAVSLDLSTMLELLSPLAPGYFLLIASVANVGKNVSFLAASASRAAIHNMLAAKGNLADVTAKAGAQTIVACMVGTGVGIVLSSLLGTDIRAILPTCLLLSTFHLSAIYISVRRLGVPTFDTQRLGLVVDAY---HRSHTMPTYQELAERERFVSYTLSEQLGLDESPKATVGSRLEEAVRDREELEQICQACDGLPFLLSIRGDLSAGTGEVHVLLLEGCGPREVLAGGYLAHLARSVLIERALQRPRWKNLPPL---PGAKSLSPLGELLPDLIVEALRRGA-------------MSPTRNPLVSGEASLQE----------SRRG--IAADFISSAESAGWNTSVVFLERPGAARLRLI 1947
            P   L +E +   +AEAML L+LP GFP S   PY  Y+ WQF GMAASAAAGVMSTQALL+A+G+G G++PLAA LNWVIKDGLGQLGGVAFSSLV+TRFD+NP+LWR++AAVSLD S +LELLSPLAP YFL IASVAN+GKNVSFLAASASRAAIHN+L+ KGNLADVTAK+GAQTI+ACM GTG G+ LS+ LG++  AI+P CL LS  HL A ++S+RRLG+PTFD QRL LVV+A     RS  +P+ Q++A +E  V+Y + E++GL+ SP   VGSRLEEAV+   ELE++C+ C+GLPFLLS+RGDL+ G GEVHVLLLEG G REVLAG Y+A +A+ +L+ER L+RPR +  P      G ++ +P G++LP++I EALR+GA             +SP+      G+  + E          +R G  IA +  + AE +GWNTS +FLE+ GA RLRL+
Sbjct:  155 PRPPLRIEAKAVRKAEAMLGLVLPSGFPGSVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGVGVGALPLAATLNWVIKDGLGQLGGVAFSSLVSTRFDANPKLWRIVAAVSLDASMVLELLSPLAPAYFLPIASVANIGKNVSFLAASASRAAIHNVLSLKGNLADVTAKSGAQTILACMAGTGAGVALSASLGSEFHAIVPACLCLSVVHLGANHMSMRRLGIPTFDHQRLELVVNAMADGDRSRGIPSPQDIAAQEDVVAYAVREKIGLNLSPTVVVGSRLEEAVKGWGELEELCRVCEGLPFLLSVRGDLAHGAGEVHVLLLEGYGTREVLAGSYVALVAKRLLLERGLRRPRGRRRPGTLARGGKENSTPTGDILPEVIEEALRQGAALLATPDAPPSPIVSPSPTDTQGGQEKVGEVPKLQEQGDAARHGRMIAHELSARAERSGWNTSALFLEKAGAVRLRLV 627          
BLAST of mRNA_F-serratus_M_contig1105.983.1 vs. uniprot
Match: A0A835YUA2_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA2_9STRA)

HSP 1 Score: 285 bits (728), Expect = 3.780e-84
Identity = 161/334 (48.20%), Postives = 224/334 (67.07%), Query Frame = 1
Query:  676 LALMLPRGFPDSTRFPYAQYSTWQFMGMAASAAAGVMSTQALLFAVGLGAGSIPLAAALNWVIKDGLGQLGGVAFSSLVNTRFDSNPRLWRMIAAVSLDLSTMLELLSPLAPGYFLLIASVANVGKNVSFLAASASRAAIHNMLAAKGNLADVTAKAGAQTIVACMVGTGVGIVLSSLLGTDIRAILPTCLLLSTFHLSAIYISVRRLGVPTFDTQRLGLVVDAYHRSHTMPTYQELAERERFVSYTLSEQLGLDESPKATVGSRLEEAVRDREELEQICQ-ACDGLPFLLSIRGDLSAGTGEVHVLLLEGCGPREVLAGGYLAHLARSVLIER 1674
            LA +LP G+P++    Y  Y+ WQF  M  S+AAGV+STQALL AVGLG+G+IPLAAALNWVIKDGLGQLGGV FSS+V+TRFD+NP+LWRM++A++LD ST LELLSP  PGYF+ +ASVANVGKNVSFLAASASRAAIHN  A + NLAD+T KAG+Q I++ M G G+GI L++++G++   + PT  +L   HL++ Y  +R + +PT D+QRL L++DA   +  +P    ++  E    + L   L   + P   +G+++ EA+    EL+ +   A   +     +    +  +  V++LLLEG     VL G   A+  R  L+E+
Sbjct:    1 LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILDAEVATGAIPQPAAVSAHETIFLHPLRAYLSRHKLPSLVIGAQVSEAICTSHELQALWDYATTAVVDNSGVNSSSAQRSACVYLLLLEGATSATVLEGARHAYAVRKALVEQ 334          
BLAST of mRNA_F-serratus_M_contig1105.983.1 vs. uniprot
Match: A0A835YMG5_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG5_9STRA)

HSP 1 Score: 269 bits (688), Expect = 6.240e-76
Identity = 189/484 (39.05%), Postives = 253/484 (52.27%), Query Frame = 1
Query:  673 MLALMLPRGFPDSTRFPYAQYSTWQFMGMAASAAAGVMSTQALLFAVGLGAGSIPLAAALNWVIKDGLGQLGGVAFSSLVNTRFDSNPRLWRMIAAVSLDLSTMLELLSPLAPGYFLLIASVANVGKNVSFLAASASRAAIHNMLAAKGNLADVTAKAGAQTIVACMVGTGVGIVLSSLLGTDIRAILPTCLLLSTFHLSAIYISVRRLGVPTFDTQRLGLVVDAYHR------------SHTMPTYQELAERERFVSYTLSEQLGLDESPKATVGSRLEEAV---------------RDREELEQICQACDGLPFLLSIRGDLSAGTGE---------------------------------VHVLLLEGCGPREVLAGGYLAHLARSVLIERALQRPRWKNLPPLPGAKSLSPLGELLPDLIVEALRRGAMSPTRNPLVSGEASLQESRRGIAADFISSAESAGWNTSVVFLERPGAARLRL 1944
            ++A +LP G+PDS R  YA+Y  WQ   M  ++AAGV+STQALL AVGLGAG++PLAAALNWV+KDGLGQLGG+AFS+LVNTRFD+NP++WRM+AAVSLD ST LELL+PL P +FL +A++AN GKNVSFLAA+ASRAAIHN  AA+ NLADVT KAGAQ I++ M G G+GI LS+ LG D   I P    L   HL + Y S+  + + T D QRL ++V                 +  +P    +++ E    + + + LG    P   +G+ +EEA+               RD   L     A  G  +++++RG    G                                    V++LL+E C    VL G   AH AR++L  R     R +              G +L   + EA R     P R                 A D ++   +AGW T V+F E P   R+R 
Sbjct:   81 LVATILPAGYPDSVRPGYARYVRWQLSSMVCTSAAGVLSTQALLHAVGLGAGAVPLAAALNWVVKDGLGQLGGIAFSALVNTRFDANPKMWRMVAAVSLDCSTALELLAPLFPAHFLPLAAIANAGKNVSFLAATASRAAIHNAFAARENLADVTGKAGAQNILSSMGGMGLGIALSAYLGADYATIAPAAAALMCGHLFSTYRSLGSVVLTTIDAQRLEIIVXXXXXXXXXXXXXXDSDNSGVPDPVSVSKTEFIFRHLIRDSLGGGRRPGLVLGASVEEALGTGASGSNANAQHAARDLRTLRDHA-AQHGDAYVVAVRGTRRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYLLLMEHCDSDSVLRGALHAHRARALLAARGYGALRRRGR----AXXXXXXXGTVLLPEVAEASR-----PRR-----------------AGDVVAQVRAAGWKTDVLFFEDPRHVRVRF 537          
BLAST of mRNA_F-serratus_M_contig1105.983.1 vs. uniprot
Match: W7TSK4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSK4_9STRA)

HSP 1 Score: 266 bits (679), Expect = 1.430e-74
Identity = 179/427 (41.92%), Postives = 247/427 (57.85%), Query Frame = 1
Query:  667 EAMLALMLPRGFPDSTRFPYAQYSTWQFMGMAASAAAGVMSTQALLFAVGLGAGSIPLAAALNWVIKDGLGQLGGVAFSSLVNTRFDSNPRLWRMIAAVSLDLSTMLELLSPLAPGYFLLIASVANVGKNVSFLAASASRAAIHNMLAAKGNLADVTAKAGAQTIVACMVGTGVGIVLSSLLGTDIRAILPTCLLLSTFHLSAIYISVRRLGVPTFDTQRLGLVVDAYHRSHTMPTYQELAERERF----VSYTLSEQLGLDESPKATVGSRLEEAVRDREELEQICQ--ACDGLPFLLSIRGDLSAGTGEVHVLLLEGCGPREVLAGGYLAHLARSVLIERALQRPRWKNLPP------LPGAKSLSPLGELLPDLIVEALRRGAMSPTRNPLVSGEASLQESRRGIAADFISSAESAGWNTSVVF 1911
            E  L  +LPRG+P S +  Y +Y   Q     AS+A GV+STQ+LL+A+GLGAG+IPLAAALNW+IKDG+GQ+GG+ F+S+VN RFD+NP+ W+M+A +SLDLS  LELL+PLAP YFL IAS+ANVGKNV FL+ASASRAAIHN  A + NLAD+TAKAG+Q IV  ++GTG+GI LS+ LG+   A+ P C  LS  H+S  Y+S+R + + T + +R  LV+D +     +P   E++  E F    +  T++        P   +G  L E    R+ L ++ +  A DG  +LL+ RG    GT  V VL+ E     +VL     A+  R     R      WK  PP      + G ++   L   L +L+ E  R       + P+V      +E       D +   + AGW    VF
Sbjct:  109 EDALRALLPRGYPRSVQKGYVEYVKLQMTASLASSAVGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIVFASVVNDRFDANPKRWKMVATISLDLSCGLELLAPLAPAYFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFIHISCNYLSLRHVCLNTLNAERAELVLDRFWSQGRIPHPGEVSGEECFMWPAIYDTVAPSALKSGLPILRMGRPLHEVASPRQ-LVRLARLFARDG--YLLNARGRARDGTATVDVLMKEDASVEDVLRACIHAYYVRREASARG-----WKAPPPPSAWTQMTGRRTEEGLETWLLELVEETHRA-----LQQPVVHSPGPSEEETITRVDDIVGQVKQAGWLIDSVF 522          
BLAST of mRNA_F-serratus_M_contig1105.983.1 vs. uniprot
Match: T0RLK8_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RLK8_SAPDV)

HSP 1 Score: 234 bits (598), Expect = 2.430e-64
Identity = 137/327 (41.90%), Postives = 208/327 (63.61%), Query Frame = 1
Query:  682 LMLPRGFPDSTRFPYAQYSTWQFMGMAASAAAGVMSTQALLFAVGLGAGSIPLAAALNWVIKDGLGQLGGVAFSSLVNTRFDSNPRLWRMIAAVSLDLSTMLELLSPLAPGYFLLIASVANVGKNVSFLAASASRAAIHNMLAAKGNLADVTAKAGAQTIVACMVGTGVGIVLSSLLGTDIRAILPTCLLLSTFHLSAIYISVRRLGVPTFDTQRLGLVVDAYHRSHTMPTYQELAERERFVSYTLSEQLGLDESPKATVGSRLEEAVRDREELEQICQACDGLPFLLSIRGDLSAGTGEVHVLLLEGCGPREVLAGGYLAHLARSV 1662
            L LPR +  ST   Y  Y+ WQF+G  A  A GV+S Q+LL+A+GL +G+IP+AAALNWVIKDGLGQ GGV F+SLVN RFDS+P+ WR+++A+++D +T+ E+L+PL P YFL +A++ANV KN+S+L+ASA+RA  H   A   NLAD+TAKAG+Q+I + ++GT +GI +S ++GT    +     +LS+ +L ++Y S+R + + T + QRL  ++DA+  +  +PT   ++++ERFVS  LS +    +     V SRL+        +        G  +LL +  D +     VH+L+       EVLA    A L +++
Sbjct:   81 LFLPRDYKTSTTHDYLPYAKWQFVGSVAGTACGVLSMQSLLYAIGLQSGAIPMAAALNWVIKDGLGQFGGVLFASLVNHRFDSDPKRWRVVSALAMDAATLTEILTPLCPAYFLPMAAMANVAKNISWLSASATRAGFHYSFAKTENLADITAKAGSQSIASSILGTALGIAISPIIGTTTSHVAGAFFVLSSINLWSLYNSLRVVSLRTLNQQRLNHILDAFIANAAIPTPDVVSQQERFVSNLLSGKACHLQHSHLDVASRLDAVYTPSTVI------WPGEKYLLHVDVDATTSHATVHLLMEASATSDEVLAAHLHARLFQNL 401          
BLAST of mRNA_F-serratus_M_contig1105.983.1 vs. uniprot
Match: A0A8K1FNA4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNA4_PYTOL)

HSP 1 Score: 233 bits (595), Expect = 3.460e-63
Identity = 145/337 (43.03%), Postives = 211/337 (62.61%), Query Frame = 1
Query:  682 LMLPRGFPDSTRFPYAQYSTWQFMGMAASAAAGVMSTQALLFAVGLGAGSIPLAAALNWVIKDGLGQLGGVAFSSLVNTRFDSNPRLWRMIAAVSLDLSTMLELLSPLAPGYFLLIASVANVGKNVSFLAASASRAAIHNMLAAKGNLADVTAKAGAQTIVACMVGTGVGIVLSSLLGTDIRAILPTCLLLSTFHLSAIYISVRRLGVPTFDTQRLGLVVDAYHRSH--TMPTYQELAERERFVSYTLSEQLGLDESPKATVGSRLEEAVRDR-EELEQICQACDGLPFLLSIRGDLSAGTGEVHVLLLEGCGPREVLAGGYLAHLARSVLIERALQ 1683
            L +PR F  S    Y  Y+ W FMG  ASAA+GV+S Q+LL+A+GLGAGSIP AAA+NWV+KDGLGQ GGV F+S+VN R+D++P+ WR  +AVSLD + +LE+L+PL P YFL +AS+ANV KN+S+L+ASA+RA  HN  A + NLAD+TAKAG+Q I + ++GTG+GIV+S   G D   +L   + LS  H  ++Y ++  + + TF+ QRL LV+D +  S   ++P   ++  +ERF+    +    L         + L +  R   +EL ++ +A     +LL++      GT  V + L E     + L     AHL  +VLI+R L+
Sbjct:  137 LFMPRDFRKSVTPDYFPYAKWYFMGTIASAASGVLSMQSLLYAIGLGAGSIPTAAAINWVLKDGLGQFGGVMFASIVNNRYDADPKRWRTASAVSLDAAVLLEILTPLCPAYFLPMASLANVAKNISWLSASATRAGFHNSFALRENLADITAKAGSQAIASSIIGTGLGIVISQYTGADTMNVLAAFVALSAAHQFSVYRALTCVSLRTFNCQRLHLVLDHFLNSKGTSVPHQDDIGSQERFMPLLFTGYQSLYSKSTVNGDATLAQVSRQSPQELLRLKEAFGQDNYLLNVTPS-KTGTLSVDLALDEAATNSDALR----AHL-HAVLIQRKLE 467          
BLAST of mRNA_F-serratus_M_contig1105.983.1 vs. uniprot
Match: A0A5D6YB24_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB24_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.170e-62
Identity = 154/365 (42.19%), Postives = 221/365 (60.55%), Query Frame = 1
Query:  616 PSPTRSLGLEHE------MRHRAEAMLALMLPRGFPDSTRFPYAQYSTWQFMGMAASAAAGVMSTQALLFAVGLGAGSIPLAAALNWVIKDGLGQLGGVAFSSLVNTRFDSNPRLWRMIAAVSLDLSTMLELLSPLAPGYFLLIASVANVGKNVSFLAASASRAAIHNMLAAKGNLADVTAKAGAQTIVACMVGTGVGIVLSSLLGTDIRAILPTCLLLSTFHLSAIYISVRRLGVPTFDTQRLGLVVDAYHRSHT--MPTYQELAERERFVSYTLSEQLGLDESPKATVGSRLEEAVRDRE-ELEQICQACDGLPFLLSIRGDLSAGTGEVHVLLLEGCGPREVLAGGYLAHLARSVLIERALQ 1683
            P+PT  L L  +      +   AE +  L LP+    S    Y  Y+ W F+G  ASAA+GV+S Q+LL+A+GLGAGSIP AAA+NWV+KDGLGQ GGV F+SLVN R+D++P+ WR  +AV+LD + +LE+L+PLAP +FL +AS+ANV KN+S+L+ASA+RA  HN  A + NLADVTAKAG+Q+I + ++GTG+GI LS + G     +L     LS  HL +IY S+  + + T + QRL LV   +  S    +P+   + ERE+FV   L+    L  +      + L +       EL+++        +LL++   L AG   V + L E     + LA    AHL  +VL++RAL+
Sbjct:   44 PAPTSDLALRAKTLLQKMVERAAEFLWDLFLPKDAATSVSKDYFPYAKWYFVGSIASAASGVLSMQSLLYAIGLGAGSIPTAAAVNWVLKDGLGQFGGVLFASLVNNRYDADPKRWRTASAVALDAAVLLEILTPLAPAHFLPLASLANVAKNISWLSASATRAGFHNSFALRENLADVTAKAGSQSIASSILGTGLGIGLSHVTGASTAHVLCAFGALSAVHLVSIYRSLSCVSLRTLNCQRLHLVASHFAASGGTHVPSLDAVREREQFVPLLLAGYRSLYRASTVNAHASLAQLCGAAPPELQRLRAFYADERYLLNVAA-LPAGGARVDLALAEDATSSDALA----AHL-HAVLVQRALE 402          
BLAST of mRNA_F-serratus_M_contig1105.983.1 vs. uniprot
Match: K3XB12_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XB12_GLOUD)

HSP 1 Score: 223 bits (567), Expect = 8.090e-60
Identity = 140/346 (40.46%), Postives = 214/346 (61.85%), Query Frame = 1
Query:  640 LEHEMRHRAEAMLALMLPRGFPDSTRFPYAQYSTWQFMGMAASAAAGVMSTQALLFAVGLGAGSIPLAAALNWVIKDGLGQLGGVAFSSLVNTRFDSNPRLWRMIAAVSLDLSTMLELLSPLAPGYFLLIASVANVGKNVSFLAASASRAAIHNMLAAKGNLADVTAKAGAQTIVACMVGTGVGIVLSSLLGTDIRAILPTCLLLSTFHLSAIYISVRRLGVPTFDTQRLGLVVDAYHRSHT-MPTYQELAERERFVSYTLSEQLGLDESPKATVGSRLEE-AVRDREELEQICQACDGLPFLLSIRGDLSAG--TGEVHVLLLEGCGPREVLAGGYLAHLARSVL 1665
            L +     A+ M  L LP+    S    Y  Y  W F+G  ASAA GV+S Q+LL+A+GLGAGSIP AAA+NWV+KDGLGQ GGV F+S+VN R+D++P+ WR  +AV+LD + ++E+L+PL P YFL IAS+ANV KN+S+L+ASA+RA  HN  A K NLADVTAKAG+Q+I + ++GTG+GI LS + G     +L    +LS FHL +IY S+  + + T ++QRL LV   +  ++  +P  + ++++E+F+ + +     L +     +G+ L + +    +EL ++ +      +LL++    S+   +  V V L +    ++ L     A LA+  L
Sbjct:   78 LRNSTERAADFMWDLFLPKDAKTSVTKDYFPYVQWYFVGSIASAATGVLSMQSLLYAIGLGAGSIPTAAAVNWVLKDGLGQFGGVMFASVVNNRYDADPKRWRTASAVALDAAVLMEILTPLCPAYFLPIASLANVAKNISWLSASATRAGFHNSFAMKENLADVTAKAGSQSIASSILGTGLGIGLSQITGASTLNVLGAFGVLSAFHLFSIYKSLACVTLRTLNSQRLHLVARHFLDNNAQVPDLETVSQQEKFMPHLIVGYASLYDRSYVNMGATLAQLSGSSPDELLRLKEFYANDKYLLNVAFPSSSSKTSARVDVALEDDATSKDALCAQLHAALAQKAL 423          
BLAST of mRNA_F-serratus_M_contig1105.983.1 vs. uniprot
Match: A0A662WLM1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLM1_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.150e-59
Identity = 124/256 (48.44%), Postives = 177/256 (69.14%), Query Frame = 1
Query:  667 EAMLALMLPRGFPDSTRFPYAQYSTWQFMGMAASAAAGVMSTQALLFAVGLGAGSIPLAAALNWVIKDGLGQLGGVAFSSLVNTRFDSNPRLWRMIAAVSLDLSTMLELLSPLAPGYFLLIASVANVGKNVSFLAASASRAAIHNMLAAKGNLADVTAKAGAQTIVACMVGTGVGIVLSSLLGTDIRAILPTCLLLSTFHLSAIYISVRRLGVPTFDTQRLGLVVDAYHRSHT----MPTYQELAERERFVSYTLS 1422
            + M  L LP+    S    Y  Y+ W F+G   S AAGV+S Q+LL+A+GLGAGSIP AAA+NWV+KDGLGQ GGV F+S+VN R+D++P+ WR+ ++V+LD+S + E+L+PLAPG FL +AS+ANV KNV++L+ASA+RA  HN  A K NLADVTAK+G+Q I + +VGTG+GI +S   G     ++    +LS  H+ + Y SV  + + T + QRL LV   + RS +    +P+ + +A++ERF+S  LS
Sbjct:  113 DVMWDLFLPKDARSSLTKDYFPYAKWSFVGSVVSCAAGVLSMQSLLYAIGLGAGSIPTAAAVNWVLKDGLGQFGGVLFASMVNNRYDADPKRWRIASSVALDISVLGEILTPLAPGSFLAVASLANVAKNVAWLSASATRAGFHNSFAVKENLADVTAKSGSQAIASSIVGTGLGIAISQWTGASTVHVVAAFSVLSALHMISTYRSVACVQLRTLNCQRLHLVASHFLRSTSERREIPSLKSVADQERFISTLLS 368          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1105.983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJS3_ECTSI1.650e-15861.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0I8_9PHAE3.300e-15758.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YUA2_9STRA3.780e-8448.20Vitamin B6 photo-protection and homoeostasis-domai... [more]
A0A835YMG5_9STRA6.240e-7639.05Vitamin B6 photo-protection and homoeostasis-domai... [more]
W7TSK4_9STRA1.430e-7441.92Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
T0RLK8_SAPDV2.430e-6441.90Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A8K1FNA4_PYTOL3.460e-6343.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6YB24_9STRA1.170e-6242.19Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
K3XB12_GLOUD8.090e-6040.46Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A662WLM1_9STRA1.150e-5948.44Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1105contigF-serratus_M_contig1105:110824..118478 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score492.7
Seed ortholog evalue2.5e-136
Seed eggNOG ortholog2880.D8LJS3
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.response to UV-B
EggNOG OGsKOG4249@1,KOG4249@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons11
Model size3047
Cds size1800
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928980.5562713-UTR-F-serratus_M_contig1105:110823..1109001622928980.5562713-UTR-F-serratus_M_contig1105:110823..110900Fucus serratus maleUTRF-serratus_M_contig1105 110824..110900 +
1690962654.2888942-UTR-F-serratus_M_contig1105:110823..1109001690962654.2888942-UTR-F-serratus_M_contig1105:110823..110900Fucus serratus maleUTRF-serratus_M_contig1105 110824..110900 +
1622928980.5742955-UTR-F-serratus_M_contig1105:111112..1112061622928980.5742955-UTR-F-serratus_M_contig1105:111112..111206Fucus serratus maleUTRF-serratus_M_contig1105 111113..111206 +
1690962654.2988043-UTR-F-serratus_M_contig1105:111112..1112061690962654.2988043-UTR-F-serratus_M_contig1105:111112..111206Fucus serratus maleUTRF-serratus_M_contig1105 111113..111206 +
1622928980.783096-UTR-F-serratus_M_contig1105:117402..1184781622928980.783096-UTR-F-serratus_M_contig1105:117402..118478Fucus serratus maleUTRF-serratus_M_contig1105 117403..118478 +
1690962654.4151742-UTR-F-serratus_M_contig1105:117402..1184781690962654.4151742-UTR-F-serratus_M_contig1105:117402..118478Fucus serratus maleUTRF-serratus_M_contig1105 117403..118478 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928980.5862765-CDS-F-serratus_M_contig1105:111206..1116801622928980.5862765-CDS-F-serratus_M_contig1105:111206..111680Fucus serratus maleCDSF-serratus_M_contig1105 111207..111680 +
1690962654.3084881-CDS-F-serratus_M_contig1105:111206..1116801690962654.3084881-CDS-F-serratus_M_contig1105:111206..111680Fucus serratus maleCDSF-serratus_M_contig1105 111207..111680 +
1622928980.5987525-CDS-F-serratus_M_contig1105:112958..1131141622928980.5987525-CDS-F-serratus_M_contig1105:112958..113114Fucus serratus maleCDSF-serratus_M_contig1105 112959..113114 +
1690962654.3266752-CDS-F-serratus_M_contig1105:112958..1131141690962654.3266752-CDS-F-serratus_M_contig1105:112958..113114Fucus serratus maleCDSF-serratus_M_contig1105 112959..113114 +
1622928980.6178873-CDS-F-serratus_M_contig1105:113301..1134441622928980.6178873-CDS-F-serratus_M_contig1105:113301..113444Fucus serratus maleCDSF-serratus_M_contig1105 113302..113444 +
1690962654.344413-CDS-F-serratus_M_contig1105:113301..1134441690962654.344413-CDS-F-serratus_M_contig1105:113301..113444Fucus serratus maleCDSF-serratus_M_contig1105 113302..113444 +
1622928980.6338582-CDS-F-serratus_M_contig1105:113854..1139581622928980.6338582-CDS-F-serratus_M_contig1105:113854..113958Fucus serratus maleCDSF-serratus_M_contig1105 113855..113958 +
1690962654.355488-CDS-F-serratus_M_contig1105:113854..1139581690962654.355488-CDS-F-serratus_M_contig1105:113854..113958Fucus serratus maleCDSF-serratus_M_contig1105 113855..113958 +
1622928980.6507707-CDS-F-serratus_M_contig1105:114440..1145691622928980.6507707-CDS-F-serratus_M_contig1105:114440..114569Fucus serratus maleCDSF-serratus_M_contig1105 114441..114569 +
1690962654.363164-CDS-F-serratus_M_contig1105:114440..1145691690962654.363164-CDS-F-serratus_M_contig1105:114440..114569Fucus serratus maleCDSF-serratus_M_contig1105 114441..114569 +
1622928980.676008-CDS-F-serratus_M_contig1105:114910..1150561622928980.676008-CDS-F-serratus_M_contig1105:114910..115056Fucus serratus maleCDSF-serratus_M_contig1105 114911..115056 +
1690962654.3711948-CDS-F-serratus_M_contig1105:114910..1150561690962654.3711948-CDS-F-serratus_M_contig1105:114910..115056Fucus serratus maleCDSF-serratus_M_contig1105 114911..115056 +
1622928980.6925683-CDS-F-serratus_M_contig1105:115310..1153771622928980.6925683-CDS-F-serratus_M_contig1105:115310..115377Fucus serratus maleCDSF-serratus_M_contig1105 115311..115377 +
1690962654.3798983-CDS-F-serratus_M_contig1105:115310..1153771690962654.3798983-CDS-F-serratus_M_contig1105:115310..115377Fucus serratus maleCDSF-serratus_M_contig1105 115311..115377 +
1622928980.7235367-CDS-F-serratus_M_contig1105:115729..1158931622928980.7235367-CDS-F-serratus_M_contig1105:115729..115893Fucus serratus maleCDSF-serratus_M_contig1105 115730..115893 +
1690962654.3883662-CDS-F-serratus_M_contig1105:115729..1158931690962654.3883662-CDS-F-serratus_M_contig1105:115729..115893Fucus serratus maleCDSF-serratus_M_contig1105 115730..115893 +
1622928980.74978-CDS-F-serratus_M_contig1105:116804..1169821622928980.74978-CDS-F-serratus_M_contig1105:116804..116982Fucus serratus maleCDSF-serratus_M_contig1105 116805..116982 +
1690962654.3971398-CDS-F-serratus_M_contig1105:116804..1169821690962654.3971398-CDS-F-serratus_M_contig1105:116804..116982Fucus serratus maleCDSF-serratus_M_contig1105 116805..116982 +
1622928980.7666237-CDS-F-serratus_M_contig1105:117163..1174021622928980.7666237-CDS-F-serratus_M_contig1105:117163..117402Fucus serratus maleCDSF-serratus_M_contig1105 117164..117402 +
1690962654.406166-CDS-F-serratus_M_contig1105:117163..1174021690962654.406166-CDS-F-serratus_M_contig1105:117163..117402Fucus serratus maleCDSF-serratus_M_contig1105 117164..117402 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1105.983.1prot_F-serratus_M_contig1105.983.1Fucus serratus malepolypeptideF-serratus_M_contig1105 111207..117402 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1105.983.1

>prot_F-serratus_M_contig1105.983.1 ID=prot_F-serratus_M_contig1105.983.1|Name=mRNA_F-serratus_M_contig1105.983.1|organism=Fucus serratus male|type=polypeptide|length=600bp
MFQRAAIRCRTNGGFHASNIQQRKRLAPAARWINARVFYPCAKASTKAVS
ASLADRCQVATKPPSPARVRRRVSGLLVIGGELNRPYPSSDGAVKPTEFV
APSATTASARVPAVCGSSHLTGVLEVVRGSDAGSRMIGVDSRGRFNHNPS
PTRSLGLEHEMRHRAEAMLALMLPRGFPDSTRFPYAQYSTWQFMGMAASA
AAGVMSTQALLFAVGLGAGSIPLAAALNWVIKDGLGQLGGVAFSSLVNTR
FDSNPRLWRMIAAVSLDLSTMLELLSPLAPGYFLLIASVANVGKNVSFLA
ASASRAAIHNMLAAKGNLADVTAKAGAQTIVACMVGTGVGIVLSSLLGTD
IRAILPTCLLLSTFHLSAIYISVRRLGVPTFDTQRLGLVVDAYHRSHTMP
TYQELAERERFVSYTLSEQLGLDESPKATVGSRLEEAVRDREELEQICQA
CDGLPFLLSIRGDLSAGTGEVHVLLLEGCGPREVLAGGYLAHLARSVLIE
RALQRPRWKNLPPLPGAKSLSPLGELLPDLIVEALRRGAMSPTRNPLVSG
EASLQESRRGIAADFISSAESAGWNTSVVFLERPGAARLRLIHGDVPNP*
back to top

mRNA from alignment at F-serratus_M_contig1105:110824..118478+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1105.983.1 ID=mRNA_F-serratus_M_contig1105.983.1|Name=mRNA_F-serratus_M_contig1105.983.1|organism=Fucus serratus male|type=mRNA|length=7655bp|location=Sequence derived from alignment at F-serratus_M_contig1105:110824..118478+ (Fucus serratus male)
ATTCTAGACTCTTGATAATAGATGAAACGACAACTATCATGAGGACGGCG AAGAGAGGGTGATACCTGTAGCTACTTGTGAGTGAATTCATGGGCTCTTG GAAGCTTGGCTCCCTGGAACTATAGGCACAACAGTACCTGTACGTCGGTA TACCTTCGTGCATTTTGCAATACTTCTAGTGACTGCCTATCACCGAGCTT GGGATGCCTCGGACAGACTGGGGTGGTCGGCACACGTATCGGTTATTTCT TTAACGGTTGCTTCTCGCTTCACGCTGCCGCTTCCACAGGGTTAAGATCG ACATCACGGCAAAGTCGGCGGGCGAGGTGGATTTGAGAGGGCGATAGCTG GAGGCTACACACCAATTCACCTGGTAGATACTTATGTTCCAAAGGGCTGC AATCAGGTGCCGCACCAACGGCGGATTCCACGCTTCCAATATCCAGCAAA GGAAGCGCCTGGCCCCCGCCGCGCGCTGGATAAACGCTCGTGTCTTCTAC CCCTGCGCCAAAGCATCGACCAAAGCTGTGTCGGCTTCGCTAGCTGACCG CTGTCAAGTCGCTACGAAGCCGCCATCTCCGGCGCGTGTTCGACGTCGCG TCAGTGGACTACTAGTAATAGGGGGCGAACTAAACCGCCCCTACCCGTCT TCTGATGGCGCTGTGAAGCCGACAGAGTTCGTGGCACCATCGGCTACGAC GGCGTCCGCCAGAGTTCCTGCCGTATGCGGGTCCTCGCATTTGACCGGCG TGTTAGAGGTGGTTCGGGGCAGCGACGCTGGGAGTCGCATGATCGGCGTG GACAGCAGAGGCAGGTTTAACCATAACCCGAGCCCCACAAGGAGCCTTGG TCTAGAGGTGAGGAGGACAGGCAGAAAAGTCGGCGGATCTTCAAAGTGAG AAAGCGCAACTTTGGTTACAATCCGAATCGAATCTCGAAAGATAGTTTCT CGTGACTACTTGTATATCCTGCTTTATTCGGAGCGGAAAACGTGAGAACG CCAGGAAATCAAATTCAATCATTGGTGGTTGACTAGGGGCAAGAACGGTG ACCTTGTATCGCGAAAGAGAACCATCGGGGTGAACCGAGGAAAGAAGATT TTAATTCGAAGAGCAGAGATAGCATGCGGGGTGGGTAACTTAGCGGTGAG TGAAAGTGGAACGCCTCGCAAGTTGATGGGTCCCATTTTTTTAGAAAGAA GGTAAACATGTCACAAACGGCGAGAAAATTTGGACCTTGCGTAATCGAAA GCACGAGGCAAAATGCGTAAGAGGGAAACGTGTCGTGTCATTGATCAGTT GAACTGTACAAACAAAATCAGAATCCTCCTCCTTTGTAAGCGAACAATCT CTTCGTCGAGTCAACACACAAAGAGTTGGTAGGACTTTACAGTATTAGTA GTTAATGCTCGCTGATAAAGGATCCACCCGACGTCTTAGCTACGCGTACC CATCGAAAGACAAAAACGGTGATATCGTAGCTCTGTATACGGTTGGTGTA CTTCCGCGCCATGGGGTCGTGAGGCACGATATAGGTGACTGTGTGAGTGA GATTTACCGTCTTCAGTAAGGGCACGGAACCAAAAATCAGCAACGGAAAA AGTCGGCACTTTTACTAGAGAAAGGATGGTACTTTACACGAGACGATCTT GCGGTCGCCTGAATTCGAGCAGTCGTGGAAATACAAGATGTGACAAGGTA ACGCCGGCGGGGGAAAAGGAGTTCAGCTGGCGTCGGGGTGCTGCAGTGCT CGGCTGCTCCACGAAATGAATCGCTTTCAATACGTGGAAAGCGCAAGATT GGTCAGGGATCGTATTCTACGTGCTTCCTCCCTCAGTATAACTGGGTACC ACTTTACCGTACAGTGCGTCGACGAAGCTAACATTCAACATTCAGCTGAC CCGATGATCGGTGCGTATGAAGCTCACTCGCTGTGCCCAAGCCCGCTCCT TTGCTCTCAACTGCGTCATCGTAACAGAGAGGAGTAGAGGTAATGCTTGA GTTATAGTTATAGCCAACTGCACCACGCCTAGCGCAATGCCGAATATATG ACAAACCAATTTCACGAACACCGATAAGAGAACCCTCTCCACCCTTCCGA CGTCTCGCGTGCGCCCTCCATCCAACGAACGATAGCACGAGATGCGACAC CGAGCGGAGGCGATGCTGGCGCTCATGCTTCCTCGTGGCTTTCCCGACTC CACTCGCTTCCCGTACGCGCAATACTCGACTTGGCAGTTCATGGGCATGG CTGCCTCAGCTGCCGCGGGGGTGATGTCTACACAAGCGTTAGTGAGTGTC ACGGTAGGAATACACAGCCCAGCGCGGCACGCAGCGTGCCGCCTTCGCGT CAACGTTTCTCACCGTTTCAGACCTCTAGACCGTTCCCCTCCTCAGGGCC TCACCATGCACTAAAATGCAACCGCTCAACCACTTCTGCCTTTCCCCCCT CCCCCCCCAACCCCGACCATTATTGAAGCTTTTCGCGGTCGGACTGGGTG CAGGGTCCATTCCGCTAGCAGCTGCGTTGAACTGGGTTATAAAGGATGGC CTGGGGCAGCTGGGTGGCGTGGCGTTCTCGAGCCTTGTCAACACGCGCTT TGACTCGAATCCAAGGCTCTGGTGGGTTCTCCGCAATCTTGCTTTGTTTG GGCATTGCTTATCGCGTTGCACGTCTCTTACAGGCGCAACATCCCGACAA CCTCACCTCACCATTTTGACCACCTCTCACCTCTGAAGTGGTAGCTCCAC CACGTGAAACATCCTCTGCATGTTGCTGACTGTTATTATTTCCTACTTAA AATACGGACGTAAGAAATCATACTTTTATAATTTCCTACCTAAAATAAAC ACGTAAAAAAACACATATTTGTACGGTATCCAGGAGGATGATCGCGGCCG TTTCTTTGGACCGCTCTTTATTATTTCCTACGTAAAATACAGACGTAAAA AAACATACCtggtaccagGTACTTTTTATGATTTCCTACTTAAAATAAAC ACGTAAAAACACATATTTGTACGGTATCCAGGAGGATGATCGCGGCCGTT TCTTTGGACCTCTCTACCATGTTAGAGCTGCTGTCGCCGCTCGCCCCGGG TTACTTCCTGCTCATCGCGTCCGTCGCCAACGTTGGTGCGTATTTTGCGC GTCTAAAAATGAATTCTTTGCGAAAAGCCTTATTTCTTATTTACACCTCC TCATATCGTGGCATATGCCCTCTTTCTCTGTCCAGCCCGCGTGCCCATCG CTCCTTGGGCAGCCGCGACTTGGGTACACCCGTAAAGAGCGTCAATGGCT GCCTTGTTCCGAATTCTTGGAAACGTGTGATGTGCTCTTGTTTGCTGACA AAAGGAGCGGAAGCGGATGATTTTTGGCCGTCCGGACGTTTAAATAGTAG AGTCGTGATCTACTAACACTGTACCACGTGATTTAATCGTGTAAGTCCGC AGATAGTTGTGCATGTGTTCACGTTTGAGTGTGAATGCCTTAGATACCTC CGAATATTCCCTCCGGGACATCACCGTCCAAATCGTCGCCCTCATCGACT CCCTGGTCAACCACCCCGCACGTGCCGTTTGGCCTCCGAGTGGGCGCTCC CCTCCGCTGCCGTGCAGGGAAGAACGTTTCGTTTCTAGCGGCGTCGGCGT CTCGCGCGGCCATCCACAACATGTTGGCGGCGAAAGGAAACCTTGCGGAC GTCACTGCCAAAGCCGGGGCGCAGACCATTGTCGCGTGCATGGTCGGTGA GCGCTCGTATGAAATCTCTCTTGCGGTTTCTGGAGTCAGAGAATCAAAAC GCGATTCGGCTTGTCGGCGCTGCCAGCAACGCCAAAAGCTGCGCGCTCGG CCATGGCGGTGAACGAAGGCGCGCCATCACCAAGACCACTACGATAGAAA AACGCGAAGCTCACAAATGGTGATTCCGTCGACCCCTTTCCTGTACGCTA AGACTTTGTGTTGGGATTTGTTGAAAGCGGAAAATTCCGACGCGCATGCG AGAGTCCAAGTCCCTTCTCCCTGCGTCGCCCTCAGCGTACGATATCCCTC CTCATCGCCGCGATGCTCGCGACGTTTGAACACGCAGGCACTGGGGTTGG AATCGTGCTGTCCTCGCTGCTTGGAACTGATATCAGGGCCATACTCCCAA CGTGTCTGCTTCTCTCAACCTTTCATCTCAGTGCCATTTATATTTCTGTG AGACGGCTCGGCGTGCCAACCTTCGACACTCAGGTATTCGTCTAAAGTTT TTGTACGGTCTGGTAGGCGTGTCTATGAGGAAGGTGACGGAAGAACGAGC GACCAAGAAGTTAGAATATATGCATTGCGCGCGGGGCGACGAAGCGGCGT CCACGTTGCTTGTGTGACTATATCAGAGGCACCCTTTTATCTTTGTGGTG CATGCGTGTATTTTTCTTTTTTCATGCCTGCTTTTTTCTTCTTCTAAAGG CGACACCTCCTGTACCTCTGTATCCTCCTTCCGTCAGCGACTGGGGCTGG TTGTCGACGCCTACCACAGGAGCCATACCATGCCGACCTATCAAGAACTA GCTGGTGAGGCTACACCGTTGTCAAAGGAGTCGATGGTTCTTGTTCAAGG ATAAAAGACAAGACGTACGACAAAAGCCCAAATTTAGATTACACCATTCC ATATCATATACTGCTACACGAAATACCGTTGTGATGTGTACTTGGTATCC CTTTTCCCAAGTCAAGAGGTTCGAACCCTTCACTTTACCGGCTTTTCGCG GATGCACGCTCGCGCGGATCGGAAATTTCCCGCCCACTTTTACGAGCCCT CTGCCGTGATCGATCTCAATAGTTTTCTCTCCCACTGCTCGGCACTCTCA ATAGTTCTCGTCTCCTGTTTTGTCCGCTTCGCGGTTCGCTGTTTTTGATC GACCAGAACGAGAGCGCTTCGTATCCTACACCCTCTCGGAGCAGCTGGGC CTGGATGAGTCTCCAAAGGCCACGGTTGGGTCTCGACTGGAGGAAGCCGT CAGGGACAGGGAAGAGCTAGAGCAAATTTGCCAGGCTTGCGACGGTCTGC CGTTCCTGCTATCGATTAGGGTGAGCTTCATTACCTGTGAGCACTTGAGG GTGCTTAAAGGTTGGGGCGAAAAACAGCTCCGGCGTTCACAAAATCATGC GCGCATAGCGTATGCTTGTGCGGACAGCCTGTGAAGAAACAACTGACGCG CGTTCGTGCATGGACTATATAGCTGTATGTATGTATGTATGGTCACACAT AGCAAGAGTATGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCA GCTGAACAGGGAAAATGAATATTCCCCTGTTCGCGTTCGTGCCTGAGAAT TTGGTCTCGCGAGACGGTTTCCGCAGTCCCGTCCCGCGTCAGCCTGCTCA TCTCCATACTCAGGCTGAATATGGTGCTTACTTACGGGATTCCTCCCGAT TTCCGCGGCGGCGTCCATTCATTTATATTGAACCGCCATACGCCATCGGG TAAGTCCCGAGTTTTTTATCGGGTCGCGCAATTGCGTACCGATGGCGCTC ACTGCCGAGAGTCCGCCGGCACGGGGCCAGTAAACCTCAAGGTAGTTCCG AACGAGGGCTGCCTTAGCAGGTCACCATGGACCAGTTGATATTCGCCTCT CTTTCCTACACCCACTATTGGTATGAAGTGGGCATGTTGAAAGTACCGGC GACATTAAGGATACTGTTTCCAACATAAAATCGTGGGACATTTTCCGTTT TGGAGAGCTCTCCCCCACCCACTCCACGAATTATAAGAGCTGTCCCTCAC TTTCAGCGCGACAGGGCTGAGTTCGGCCCTCGCTCCTGCGCTGTCATTTA TGTCGCGACACGTGCCACTCCTCTACTTCCCCGACTGACAAGATTTGGGT GCCCCGTGGGACTTACCCGTCGTATAAAGTTGCATTGAATCGTCTCATGA CCAAGGATTGTCTGGCCATAATACCGTGCAGGGTGACCTTTCGGCGGGCA CGGGGGAGGTGCACGTTTTGCTCCTGGAAGGGTGCGGGCCCCGAGAGGTC CTCGCCGGAGGTTATCTTGCCCACCTAGCTAGGAGCGTCCTTATCGAACG CGCTCTGCAGAGACCTCGTTGGAAGAACCTTCCGCCGCTGCCAGGGGCTA AATCATTGTGTGAGTATAGAGGCTATTCATCAACATCGGGTGTCCACGTT GTTTGAGTTCGAACAAAGGGTATCCCGGATTTCCCATTCATTCCTAACCC CCTCCCCACCTGAAAAAGGCCCCGGCCCAATTATTTTTGGTCTCACTGAA GTAACCTTGTGCGCACCTAAAAAATCGGTGTCATCAACAGCACCGCTAGG CGAGCTCCTTCCCGACTTGATCGTGGAAGCTCTTCGACGAGGAGCTATGT CGCCGACGCGCAACCCCTTGGTGAGTGGAGAGGCATCACTCCAGGAAAGT CGCCGTGGCATCGCGGCAGACTTTATTTCCAGTGCAGAGAGTGCTGGATG GAACACGTCCGTTGTATTTTTGGAAAGACCAGGGGCGGCGAGGTTGCGAC TTATCCACGGCGATGTTCCCAATCCCTGAAAGATGGCGATTGAAGGCGGC GAGTCTTCAACGGTCGCCCCCCCCCGAAGTATTACTAACCCTCTAAGGTG TACGCCACGAGCGGTGCGCTTGTACAACGTTTTTTGGCGCTTGCATAACG TCTGGTGGCGCTTCCATTACGTCCTGCGAGGAAAACATCAAGGCAAAGGT ATCGTACTGTATTATTCGGATAACGATGGCGCTGTTTAGTGTGTGCTGTG AAACCTTTTGCGAGTGGGGTCAAGGTGTTGTCGCGTGCATTCCGTCTCGT TATCAGATGGATCTCCCAAGTATCACGAGGGGCAGAAATCACTTGATGCA GCAAACGAGATGGGCGTGCCGTAGAGTCATCTGTCATGCACGTCCTTGGA AAATGTGTCATGAGACGTGCTAGGAATCTGTAGTAATCCGGTGCACAAAC TGCACACAGGTTGCGCGCATGTTTCTCGTCTTTTGTGTGTGTGTGTGTAT CAAATTGCACACAACCGCGCAATCAGGTCATATAATATTATCCTAGTCAT TATATGCTTATCGAATTGGTCCTCCCAAGGAGGGGTTAAGGATACTTGTT AAGAGTGTGTGTATGTCACGATTTTGGATACATCCAACCAGGTAAACATT TTGGAGGGGTAGAGTACTTTGAAGGGATAGAGCTCATATTAAGCGCCCTG TCGTGTTTGGGCCCGTAGGGATGCAAAGAGGGAGAAGGCGGCACAGTCGT TTGTTCGTATCCCGCTTTCGACCGAGGGGCGAGGGGGGGGCTCAACCTGT CATTAATATTAATATATATCGGTGAGAGCAGCTCGATGCTATGTTGTTGA TACAGTATATTGGAATAGATGGTGAAGGATGAGGATCAGGTTTCGAGGGC TGAGTCCGAAAAATGGGGCTTACTTTTCTATAAAGTAGCAGACAGGTTCC TAGGGGATCATCACTACCGTAGCTTTATGCTATCGGGCCATTCGCTGTCA GAATGCTGTCAGAATACGGAAGAAATACTTGTACGAGGTTACGATAGTCA CTAAAGAGAGGGAGGGATGTTGTGTTCGGAAAAAAACTCTAAATTTATTT GGGTT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1105:110824..118478+

>mRNA_F-serratus_M_contig1105.983.1 ID=mRNA_F-serratus_M_contig1105.983.1|Name=mRNA_F-serratus_M_contig1105.983.1|organism=Fucus serratus male|type=CDS|length=3600bp|location=Sequence derived from alignment at F-serratus_M_contig1105:110824..118478+ (Fucus serratus male)
ATGTTCCAAAGGGCTGCAATCAGGTGCCGCACCAACGGCGGATTCCACGC
TTCCAATATCCAGCAAAGGAAGCGCCTGGCCCCCGCCGCGCGCTGGATAA
ACGCTCGTGTCTTCTACCCCTGCGCCAAAGCATCGACCAAAGCTGTGTCG
GCTTCGCTAGCTGACCGCTGTCAAGTCGCTACGAAGCCGCCATCTCCGGC
GCGTGTTCGACGTCGCGTCAGTGGACTACTAGTAATAGGGGGCGAACTAA
ACCGCCCCTACCCGTCTTCTGATGGCGCTGTGAAGCCGACAGAGTTCGTG
GCACCATCGGCTACGACGGCGTCCGCCAGAGTTCCTGCCGTATGCGGGTC
CTCGCATTTGACCGGCGTGTTAGAGGTGGTTCGGGGCAGCGACGCTGGGA
GTCGCATGATCGGCGTGGACAGCAGAGGCAGGTTTAACCATAACCCGAGC
CCCACAAGGAGCCTTGGTCTAGAGATGTTCCAAAGGGCTGCAATCAGGTG
CCGCACCAACGGCGGATTCCACGCTTCCAATATCCAGCAAAGGAAGCGCC
TGGCCCCCGCCGCGCGCTGGATAAACGCTCGTGTCTTCTACCCCTGCGCC
AAAGCATCGACCAAAGCTGTGTCGGCTTCGCTAGCTGACCGCTGTCAAGT
CGCTACGAAGCCGCCATCTCCGGCGCGTGTTCGACGTCGCGTCAGTGGAC
TACTAGTAATAGGGGGCGAACTAAACCGCCCCTACCCGTCTTCTGATGGC
GCTGTGAAGCCGACAGAGTTCGTGGCACCATCGGCTACGACGGCGTCCGC
CAGAGTTCCTGCCGTATGCGGGTCCTCGCATTTGACCGGCGTGTTAGAGG
TGGTTCGGGGCAGCGACGCTGGGAGTCGCATGATCGGCGTGGACAGCAGA
GGCAGGTTTAACCATAACCCGAGCCCCACAAGGAGCCTTGGTCTAGAGCA
CGAGATGCGACACCGAGCGGAGGCGATGCTGGCGCTCATGCTTCCTCGTG
GCTTTCCCGACTCCACTCGCTTCCCGTACGCGCAATACTCGACTTGGCAG
TTCATGGGCATGGCTGCCTCAGCTGCCGCGGGGGTGATGTCTACACAAGC
GTTACACGAGATGCGACACCGAGCGGAGGCGATGCTGGCGCTCATGCTTC
CTCGTGGCTTTCCCGACTCCACTCGCTTCCCGTACGCGCAATACTCGACT
TGGCAGTTCATGGGCATGGCTGCCTCAGCTGCCGCGGGGGTGATGTCTAC
ACAAGCGTTACTTTTCGCGGTCGGACTGGGTGCAGGGTCCATTCCGCTAG
CAGCTGCGTTGAACTGGGTTATAAAGGATGGCCTGGGGCAGCTGGGTGGC
GTGGCGTTCTCGAGCCTTGTCAACACGCGCTTTGACTCGAATCCAAGGCT
CTGCTTTTCGCGGTCGGACTGGGTGCAGGGTCCATTCCGCTAGCAGCTGC
GTTGAACTGGGTTATAAAGGATGGCCTGGGGCAGCTGGGTGGCGTGGCGT
TCTCGAGCCTTGTCAACACGCGCTTTGACTCGAATCCAAGGCTCTGGAGG
ATGATCGCGGCCGTTTCTTTGGACCTCTCTACCATGTTAGAGCTGCTGTC
GCCGCTCGCCCCGGGTTACTTCCTGCTCATCGCGTCCGTCGCCAACGTTG
GAGGATGATCGCGGCCGTTTCTTTGGACCTCTCTACCATGTTAGAGCTGC
TGTCGCCGCTCGCCCCGGGTTACTTCCTGCTCATCGCGTCCGTCGCCAAC
GTTGGGAAGAACGTTTCGTTTCTAGCGGCGTCGGCGTCTCGCGCGGCCAT
CCACAACATGTTGGCGGCGAAAGGAAACCTTGCGGACGTCACTGCCAAAG
CCGGGGCGCAGACCATTGTCGCGTGCATGGTCGGGAAGAACGTTTCGTTT
CTAGCGGCGTCGGCGTCTCGCGCGGCCATCCACAACATGTTGGCGGCGAA
AGGAAACCTTGCGGACGTCACTGCCAAAGCCGGGGCGCAGACCATTGTCG
CGTGCATGGTCGGCACTGGGGTTGGAATCGTGCTGTCCTCGCTGCTTGGA
ACTGATATCAGGGCCATACTCCCAACGTGTCTGCTTCTCTCAACCTTTCA
TCTCAGTGCCATTTATATTTCTGTGAGACGGCTCGGCGTGCCAACCTTCG
ACACTCAGGCACTGGGGTTGGAATCGTGCTGTCCTCGCTGCTTGGAACTG
ATATCAGGGCCATACTCCCAACGTGTCTGCTTCTCTCAACCTTTCATCTC
AGTGCCATTTATATTTCTGTGAGACGGCTCGGCGTGCCAACCTTCGACAC
TCAGCGACTGGGGCTGGTTGTCGACGCCTACCACAGGAGCCATACCATGC
CGACCTATCAAGAACTAGCTGCGACTGGGGCTGGTTGTCGACGCCTACCA
CAGGAGCCATACCATGCCGACCTATCAAGAACTAGCTGAACGAGAGCGCT
TCGTATCCTACACCCTCTCGGAGCAGCTGGGCCTGGATGAGTCTCCAAAG
GCCACGGTTGGGTCTCGACTGGAGGAAGCCGTCAGGGACAGGGAAGAGCT
AGAGCAAATTTGCCAGGCTTGCGACGGTCTGCCGTTCCTGCTATCGATTA
GGAACGAGAGCGCTTCGTATCCTACACCCTCTCGGAGCAGCTGGGCCTGG
ATGAGTCTCCAAAGGCCACGGTTGGGTCTCGACTGGAGGAAGCCGTCAGG
GACAGGGAAGAGCTAGAGCAAATTTGCCAGGCTTGCGACGGTCTGCCGTT
CCTGCTATCGATTAGGGGTGACCTTTCGGCGGGCACGGGGGAGGTGCACG
TTTTGCTCCTGGAAGGGTGCGGGCCCCGAGAGGTCCTCGCCGGAGGTTAT
CTTGCCCACCTAGCTAGGAGCGTCCTTATCGAACGCGCTCTGCAGAGACC
TCGTTGGAAGAACCTTCCGCCGCTGCCAGGGGCTAAATCATTGTGGTGAC
CTTTCGGCGGGCACGGGGGAGGTGCACGTTTTGCTCCTGGAAGGGTGCGG
GCCCCGAGAGGTCCTCGCCGGAGGTTATCTTGCCCACCTAGCTAGGAGCG
TCCTTATCGAACGCGCTCTGCAGAGACCTCGTTGGAAGAACCTTCCGCCG
CTGCCAGGGGCTAAATCATTGTCACCGCTAGGCGAGCTCCTTCCCGACTT
GATCGTGGAAGCTCTTCGACGAGGAGCTATGTCGCCGACGCGCAACCCCT
TGGTGAGTGGAGAGGCATCACTCCAGGAAAGTCGCCGTGGCATCGCGGCA
GACTTTATTTCCAGTGCAGAGAGTGCTGGATGGAACACGTCCGTTGTATT
TTTGGAAAGACCAGGGGCGGCGAGGTTGCGACTTATCCACGGCGATGTTC
CCAATCCCTGACACCGCTAGGCGAGCTCCTTCCCGACTTGATCGTGGAAG
CTCTTCGACGAGGAGCTATGTCGCCGACGCGCAACCCCTTGGTGAGTGGA
GAGGCATCACTCCAGGAAAGTCGCCGTGGCATCGCGGCAGACTTTATTTC
CAGTGCAGAGAGTGCTGGATGGAACACGTCCGTTGTATTTTTGGAAAGAC
CAGGGGCGGCGAGGTTGCGACTTATCCACGGCGATGTTCCCAATCCCTGA
back to top