mRNA_F-serratus_M_contig1100.961.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1100.961.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 169 bits (428), Expect = 2.750e-45 Identity = 82/163 (50.31%), Postives = 119/163 (73.01%), Query Frame = 1
Query: 64 VPVCELVPDGVETTGNSGMTLETLDLKSGFFRTSNQSREVLECYREEACLGGSTAGRYCAEGYTGPYCAVCDEGYGSGFQYSCNSCQGSDKWAGIGGAVAVLVVAMAVVAWGVAYLVGVVDRPISERSGMWERRVLNFRDGLVRAIPLTAIKIVLVSWQIITQ 552
VP+CE GV+T+G+ G+TL L+L G++RTS +S+ VL+CY+EEAC+GG+ +YC EGY G YCAVCDEGY SG+Q+SC+ C G + + IG +VA+ VA+ +A +A LV VVD + + W +R+ + RD +V+A+PLT+IKIV+V+WQI+TQ
Sbjct: 590 VPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQ 752
BLAST of mRNA_F-serratus_M_contig1100.961.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 137 bits (346), Expect = 3.030e-34 Identity = 80/189 (42.33%), Postives = 114/189 (60.32%), Query Frame = 1
Query: 1 CSLCT---DLQCEARTDIDMDETTVPVCELVPDGVETTGNSGMTLETLDLKSGFFRTSNQSREVLECYREEACLGGSTAGRYCAEGYTGPYCAVCDEGYGSGFQYSCNSCQGSDKWAGIGGAVAVLVVAMAVVAWGVAYLVGVVD--RPISERSGMWERRVLNFRDGLVRAIPLTAIKIVLVSWQIITQ 552
CS C D + E+ ++ +D T+P CE P+G TT G TL TL++ GF+R+S S ++ EC+ ++AC GGS G YCAEGY GPYCAVC GY G+ +C SC G K + + A A+ +A+A V V+ LV VV+ P + S W R ++ + + +PLTA+KIV+V WQI+TQ
Sbjct: 546 CSRCASECDSELESAAEL-VDAETLPTCEEAPEGSRTT-RRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQ 732
BLAST of mRNA_F-serratus_M_contig1100.961.1 vs. uniprot
Match: D7FUB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB6_ECTSI) HSP 1 Score: 132 bits (332), Expect = 3.420e-33 Identity = 65/122 (53.28%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 1 CSLCTDLQCEARTDID-----MDETTVPVCELVPDGVETTGNSGMTLETLDLKSGFFRTSNQSREVLECYREEACLGGSTAGRYCAEGYTGPYCAVCDEGYGSGFQYSCNSCQGSDKWAGIG 351
CS C CE +D +++ VP C+ V GV +GN+G TL+TLDL+SG++RTS +S +LEC+REEAC+GGSTAG YCA GY G YCA C+EGY SG QYSC SC G + + IG
Sbjct: 341 CSRCVSSPCEDDDMLDNGISVLEDNVVPHCKAVAVGVNVSGNAGTTLQTLDLESGYYRTSAESDIILECHREEACVGGSTAGEYCATGYQGAYCAACEEGYASGLQYSCKSCGGDNATSAIG 462
BLAST of mRNA_F-serratus_M_contig1100.961.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 133 bits (334), Expect = 1.230e-32 Identity = 79/191 (41.36%), Postives = 112/191 (58.64%), Query Frame = 1
Query: 1 CSLCTDLQCEARTDIDMDETTV------PVCELVPDGVETTGNSGMTLETLDLKSGFFRTSNQSREVLECYREEACLGGSTAGRYCAEGYTGPYCAVCDEGYGSGFQYSCNSCQGSDKWAGIGGAVAVLVVAMAVVAWGVAYLVGVVDR-PISERSGMWERRVLNFRDGLVRAIPLTAIKIVLVSWQIITQ 552
CS C +C + + DE TV P CE VP+G +TT G TL TL++ G++R+S S ++ EC+ E+AC GG G YCA GYTGPYCAVC G+ G+ +SC SC G + AV V+ + V + A LV VV+ P S+ W+++ ++ + + +PLTAIKIV+V WQI+TQ
Sbjct: 552 CSRCAS-ECASELE---DEVTVADPDLLPACEAVPEGAQTTSRGG-TLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQ 737
BLAST of mRNA_F-serratus_M_contig1100.961.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 129 bits (323), Expect = 3.700e-31 Identity = 73/175 (41.71%), Postives = 106/175 (60.57%), Query Frame = 1
Query: 49 MDETTVPVCELVPDGVETTGNSGMTLETLDLKSGFFRTSNQSREVLECYREEACLGGSTAGRYCAEGYTGPYCAVCDEGYGSGFQYSCNSCQGSDKWAGIGGAVAVLVVAMAVVAWGVAYLVGVVDRPISER-------SGMWERRVLNFRDGLVRAIPLTAIKIVLVSWQIITQ 552
+D T+P CE P+G TT G TL TL++ GF+R+S S ++ EC+ ++AC GGS G YC+EGY GPYCAVC GY G+ +C SC G+ K + + A A+ ++A+A V V+ LV VV+ ++ S W R + + + +PLTA+KIV+V WQI+TQ
Sbjct: 540 VDADTLPTCETAPEGSRTT-RRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQ 713
BLAST of mRNA_F-serratus_M_contig1100.961.1 vs. uniprot
Match: A0A6H5L874_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L874_9PHAE) HSP 1 Score: 125 bits (315), Expect = 3.450e-30 Identity = 68/164 (41.46%), Postives = 99/164 (60.37%), Query Frame = 1
Query: 64 VPVCELVPDGVETTGNSGMTLETLDLKSGFFRTSNQSREVLECYREEACLGGSTAGRYCAEGYTGPYCAVCDEGYGSGFQYSCNSCQGSDKWAGIGGAVAVLVVAMAVVAWGVAYLVGVVDRPISERS-GMWERRVLNFRDGLVRAIPLTAIKIVLVSWQIITQ 552
+P CE VP+G +TT G TL TL++ G++R+ S ++ EC+ E+AC GG G YCA GY+GPYCAVC G+ G+ +SC SC G + V + + V + A LV VV+ S ++ W+R+ +R + + +PLTAIKIV+V WQI+TQ
Sbjct: 433 LPACEAVPEGAQTTTRGG-TLATLEILPGYYRSLATSTDIRECFFEDACEGGQVVGEYCATGYSGPYCAVCTAGFSRGYFHSCKSCMGDSRRRAFYVVSTVGALVLLAVVFLAAKLVSVVEMTPSRKAPSRWQRKRSVWRARIKKILPLTAIKIVVVVWQIVTQ 595
BLAST of mRNA_F-serratus_M_contig1100.961.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 122 bits (307), Expect = 4.890e-29 Identity = 75/186 (40.32%), Postives = 109/186 (58.60%), Query Frame = 1
Query: 1 CSLCTDLQCEA-RTDIDMDETTVPVCELVPDGVETTGNSGMTLETLDLKSGFFRTSNQSREVLECYREEACLGGSTAGRYCAEGYTGPYCAVCDEGYGSGFQYSCNSCQGSDKWAGIGGAVAVLVVAMAVVAWGVAYLVGVVDRPISERSGMWER-RVLNFRDGLVRAIPLTAIKIVLVSWQIITQ 552
C+ C+ C+A + + M ++T+PVC +G + + +SG T+ TLDL+ G++RTS +S+ V+ECY AC GG+ YCA+GY GPYC+VC +GY G Y C+ C G+ + +G A A A LV VVD S + + R+ F +V A PLT +KIV+V+WQIITQ
Sbjct: 541 CARCS-ADCDAIPSSVTMADSTIPVCVESMEGTKAS-SSGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKDARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQ 724
BLAST of mRNA_F-serratus_M_contig1100.961.1 vs. uniprot
Match: D7FWD7_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD7_ECTSI) HSP 1 Score: 122 bits (306), Expect = 6.300e-29 Identity = 75/187 (40.11%), Postives = 112/187 (59.89%), Query Frame = 1
Query: 1 CSLCTDLQCEA-RTDIDMDETTVPVCELVPDGVETTGNSGMTLETLDLKSGFFRTSNQSREVLECYREEACLGGSTAGRYCAEGYTGPYCAVCDEGYGSGFQYSCNSCQGSDKWAGIGGAVAVLVVAMAVVAWGVAYLVGVVD--RPISERSGMWERRVLNFRDGLVRAIPLTAIKIVLVSWQIITQ 552
C+ C+ C+A + + M ++T+PVC + +G + + +SG T+ TLDL+ G++RTS +S+ V+ECY AC GG+ YCA+GY GPYC+VC +GY G Y C+ C G+ + +G A A LV VVD R I + + + R+ F+ +V A PLT +KIV+V+WQIITQ
Sbjct: 300 CARCS-ADCDAIPSSVTMADSTIPVCLELMEGTKAS-SSGTTVATLDLQEGYYRTSAESQVVVECYLTGACAGGTDPENYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGLAAXXXXXXXXXXAVVATDLVRVVDGDRSIKDARTL-KGRLSRFQAFVVNAFPLTTVKIVVVAWQIITQ 483
BLAST of mRNA_F-serratus_M_contig1100.961.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI) HSP 1 Score: 105 bits (262), Expect = 5.480e-23 Identity = 68/181 (37.57%), Postives = 101/181 (55.80%), Query Frame = 1
Query: 25 CEARTDIDM-DETTVPVCELVPDGVETTGNSGMTLETLDLKSGFFRTSNQSREVLECYREEACLGGST-AGRYCAEGYTGPYCAVCDEGYGSGFQYSCNSCQGSDKWAGIGGAVAVLVVAMAVVAWGVAYLVGVVDRPISE---RSGMWERRVLNFRDGLVRAIPLTAIKIVLVSWQIITQ 552
CE +D + D + VP C + PD ++TGN T+ETL + G++R + + +L C+ +ACLGG T A YCAEGY GPYCAVC +G+ ++C++C SD A V LV +V G+ +LV +V R +G W R L R +PL ++KI++V WQI+ +
Sbjct: 833 CEECSDCGVADSSEVPTCTITPDHTQSTGN---TIETLSIDPGYWRATPSTIIILACHNSDACLGGETGAADYCAEGYEGPYCAVCSDGFAESLSFTCSNC--SDGKA----TVVALVALPTMVILGLIFLVYMVSRERKRDAPSAGPWHR--------LKRLLPLQSLKIMIVVWQILNE 996
BLAST of mRNA_F-serratus_M_contig1100.961.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 105 bits (261), Expect = 7.470e-23 Identity = 67/165 (40.61%), Postives = 95/165 (57.58%), Query Frame = 1
Query: 64 VPVCELVPDGVETTGNSGMTLETLDLKSGFFRTSNQSREVLECYREEACLGG--STAGRYCAEGYTGPYCAVCDEGYGSGFQYSCNSCQGSDKWAGIGGAVAVLVVAMAVVAWGVAYLVGVVDRPISERSGMWERRVLNFRDGLVRAIPLTAIKIVLVSWQIITQ 552
VP C V D +TG +TLETL + G++R ++ S+E+L CY +ACLGG TAG YC E Y GPYC++C +GY S YSC+ C + GI AV + V+A+ V + Y++ SG R + + L +PL ++KIV+VSWQI+TQ
Sbjct: 949 VPTCSDVMDHGTSTGGK-VTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAG-YCLESYEGPYCSICSDGYASNLGYSCSKC--FSRSGGIVFAVGMAVLALFVAVVVIMYIM----------SGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQ 1099 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1100.961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1100.961.1 >prot_F-serratus_M_contig1100.961.1 ID=prot_F-serratus_M_contig1100.961.1|Name=mRNA_F-serratus_M_contig1100.961.1|organism=Fucus serratus male|type=polypeptide|length=184bp CSLCTDLQCEARTDIDMDETTVPVCELVPDGVETTGNSGMTLETLDLKSGback to top mRNA from alignment at F-serratus_M_contig1100:2773..3569- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1100.961.1 ID=mRNA_F-serratus_M_contig1100.961.1|Name=mRNA_F-serratus_M_contig1100.961.1|organism=Fucus serratus male|type=mRNA|length=797bp|location=Sequence derived from alignment at F-serratus_M_contig1100:2773..3569- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1100:2773..3569- >mRNA_F-serratus_M_contig1100.961.1 ID=mRNA_F-serratus_M_contig1100.961.1|Name=mRNA_F-serratus_M_contig1100.961.1|organism=Fucus serratus male|type=CDS|length=1104bp|location=Sequence derived from alignment at F-serratus_M_contig1100:2773..3569- (Fucus serratus male)back to top |