mRNA_F-serratus_M_contig110.935.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig110.935.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI) HSP 1 Score: 114 bits (285), Expect = 1.360e-27 Identity = 57/80 (71.25%), Postives = 68/80 (85.00%), Query Frame = 1
Query: 31 DEKEDEEKGFNTTGNQEGNVKPIKRLVRSYVREATLLSNVGAEVSFQLPNDASGTFEAMLTELDARKAELGITSYGMSVT 270
+E+ D E+G NTT QE VKPIK LVRS+V+EATLLSNVGAEVSFQLPNDAS +F+ MLTE+D+RK ELG+ SYG+SVT
Sbjct: 950 EEENDNEQGVNTTATQEQGVKPIKHLVRSHVKEATLLSNVGAEVSFQLPNDASSSFQDMLTEIDSRKTELGVNSYGLSVT 1029
BLAST of mRNA_F-serratus_M_contig110.935.1 vs. uniprot
Match: A0A6H5KQ87_9PHAE (ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ87_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.180e-26 Identity = 55/76 (72.37%), Postives = 65/76 (85.53%), Query Frame = 1
Query: 43 DEEKGFNTTGNQEGNVKPIKRLVRSYVREATLLSNVGAEVSFQLPNDASGTFEAMLTELDARKAELGITSYGMSVT 270
D E+G NTT QE VKPIK LVRS+V+EATLLSNVGAEVSFQLPNDAS +F+ ML+E+D+RK ELG+ SYG+SVT
Sbjct: 778 DNEQGVNTTATQEQGVKPIKHLVRSHVKEATLLSNVGAEVSFQLPNDASSSFQGMLSEIDSRKTELGVNSYGLSVT 853
BLAST of mRNA_F-serratus_M_contig110.935.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI) HSP 1 Score: 111 bits (277), Expect = 1.630e-26 Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 1
Query: 10 ALENG-TGDEKEDEEK-GFNTTGNQEGNVKPIKRLVRSYVREATLLSNVGAEVSFQLPNDASGTFEAMLTELDARKAELGITSYGMSVT 270
A E+G +EK DEE G N T QE VKPIKRLVRS+V+ ATLLSNVGAEVSFQLPNDAS +F+ MLTE+D+RKAELG+ SYG+SVT
Sbjct: 920 AFESGMNAEEKIDEEDIGVNNTAAQEAGVKPIKRLVRSHVKAATLLSNVGAEVSFQLPNDASPSFQGMLTEIDSRKAELGVNSYGLSVT 1008
BLAST of mRNA_F-serratus_M_contig110.935.1 vs. uniprot
Match: A0A6H5KPW7_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW7_9PHAE) HSP 1 Score: 107 bits (268), Expect = 2.630e-25 Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 1
Query: 55 GFNTTGNQEGNVKPIKRLVRSYVREATLLSNVGAEVSFQLPNDASGTFEAMLTELDARKAELGITSYGMSVT 270
G N T QE VKPIKRLVRS+V+EATLLSNVGAEVSFQLPN AS +F+ MLTE+D+RKAELG+ SYG+SVT
Sbjct: 798 GVNNTAAQEAGVKPIKRLVRSHVKEATLLSNVGAEVSFQLPNAASPSFQGMLTEIDSRKAELGVNSYGLSVT 869
BLAST of mRNA_F-serratus_M_contig110.935.1 vs. uniprot
Match: D8LFQ4_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ4_ECTSI) HSP 1 Score: 102 bits (253), Expect = 2.800e-23 Identity = 56/80 (70.00%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 10 ALENGTGDE-KEDEEKGFNTTGNQEGNVKPIKRLVRSYVREATLLSNVGAEVSFQLPNDASGTFEAMLTELDARKAELGI 246
A E+GT E K DE+ G N T QE VKPIKRLVRS+V+ ATLLSNVGAEVSFQLPNDAS +F+ MLTE+D+RKAELG+
Sbjct: 911 AFESGTSAEGKIDEDIGVNNTAAQEAGVKPIKRLVRSHVKAATLLSNVGAEVSFQLPNDASPSFQGMLTEIDSRKAELGV 990
BLAST of mRNA_F-serratus_M_contig110.935.1 vs. uniprot
Match: D7FZA6_ECTSI (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 1.630e-16 Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 1
Query: 88 VKPIKRLVRSYVREATLLSNVGAEVSFQLPNDASGTFEAMLTELDARKAELGITSYGMSVT 270
V PIK LVRS+V+ + LLS+VGAE+SFQLP++AS +F+ ML E+D RK ELGI SYGMSVT
Sbjct: 964 VGPIKALVRSHVKASVLLSDVGAELSFQLPSEASSSFKGMLLEMDDRKEELGINSYGMSVT 1024
BLAST of mRNA_F-serratus_M_contig110.935.1 vs. uniprot
Match: A0A6H5JS94_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS94_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 1.950e-15 Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 1
Query: 88 VKPIKRLVRSYVREATLLSNVGAEVSFQLPNDASGTFEAMLTELDARKAELGITSYGMSVT 270
V PIK +VRS+V+ + LLS+VGAE+SFQLP++AS +F+ ML E+D RK ELGI SYG+SVT
Sbjct: 741 VGPIKAVVRSHVKGSVLLSDVGAELSFQLPSEASSSFKGMLLEMDDRKEELGINSYGVSVT 801
BLAST of mRNA_F-serratus_M_contig110.935.1 vs. uniprot
Match: A0A6J0UX07_9SAUR (ATP-binding cassette sub-family A member 3 n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0UX07_9SAUR) HSP 1 Score: 70.9 bits (172), Expect = 2.550e-12 Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 85 NVKPIKRLVRSYVREATLLSNVGAEVSFQLPNDASGTFEAMLTELDARKAELGITSYGMSVT 270
N+ I RL+ YV +ATL SN GAE+SF LP +++ FEA+ TEL+ R+ ELGI SYG SVT
Sbjct: 772 NIGDISRLIHHYVPKATLESNAGAELSFILPKESTHRFEALFTELELRREELGIASYGASVT 833
BLAST of mRNA_F-serratus_M_contig110.935.1 vs. uniprot
Match: UPI0014550BE2 (ATP-binding cassette sub-family A member 3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014550BE2) HSP 1 Score: 70.5 bits (171), Expect = 3.480e-12 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 85 NVKPIKRLVRSYVREATLLSNVGAEVSFQLPNDASGTFEAMLTELDARKAELGITSYGMSVT 270
NV + L+ SY+ A++ SNVGAE+SF LPN+AS TFEA+ T L+ K LGI+SYG S+T
Sbjct: 605 NVNQVADLIHSYIPTASMESNVGAELSFILPNEASDTFEALFTHLEENKKVLGISSYGASIT 666
BLAST of mRNA_F-serratus_M_contig110.935.1 vs. uniprot
Match: A0A835YSC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSC0_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.510e-12 Identity = 36/64 (56.25%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 79 EGNVKPIKRLVRSYVREATLLSNVGAEVSFQLPNDASGTFEAMLTELDARKAELGITSYGMSVT 270
EG I++LVR +VR+A +LS+VGAEV+FQLP +AS +F+ +L ELD K+ L + SYGMSVT
Sbjct: 1039 EGASAEIEKLVRRHVRQAQVLSDVGAEVAFQLPTNASASFKPLLLELDDNKSALCVGSYGMSVT 1102 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig110.935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig110.935.1 >prot_F-serratus_M_contig110.935.1 ID=prot_F-serratus_M_contig110.935.1|Name=mRNA_F-serratus_M_contig110.935.1|organism=Fucus serratus male|type=polypeptide|length=90bp FSSALENGTGDEKEDEEKGFNTTGNQEGNVKPIKRLVRSYVREATLLSNVback to top mRNA from alignment at F-serratus_M_contig110:2028..2824- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig110.935.1 ID=mRNA_F-serratus_M_contig110.935.1|Name=mRNA_F-serratus_M_contig110.935.1|organism=Fucus serratus male|type=mRNA|length=797bp|location=Sequence derived from alignment at F-serratus_M_contig110:2028..2824- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig110:2028..2824- >mRNA_F-serratus_M_contig110.935.1 ID=mRNA_F-serratus_M_contig110.935.1|Name=mRNA_F-serratus_M_contig110.935.1|organism=Fucus serratus male|type=CDS|length=540bp|location=Sequence derived from alignment at F-serratus_M_contig110:2028..2824- (Fucus serratus male)back to top |