mRNA_F-serratus_M_contig11.930.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig11.930.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI) HSP 1 Score: 588 bits (1515), Expect = 3.960e-204 Identity = 326/486 (67.08%), Postives = 378/486 (77.78%), Query Frame = 3
Query: 165 LLPSLLCLTCVVGTALGAIRITECPSDATDPTYSWDNDGEELSIEGEGSCVTPSVIFKNLEDAPLVPMTAEGEEVAEETGIWLLTKSLIMRTGTTLLLHGDLDCEELRLVSSSSSFIELTAAGAYISLLGTKVVSWSRSGATVDLGSSDGSEPRSYIRCLSERIHSSDVCDGAANEDVGEGRLDIINSEVGYLGYQSAEAYGITYKVHGYCEDESNPEVFDRVNVRGDIRFSNIHHNWFGMYSYGHQDGLWEYNMMHNCGYYGFDPHDDSDNLRIHNNIVYKNGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVCIALFESFGIEVSDNFCNGNTEGIRLSMGASYNKIFDNVLLNTSSRALWLYKGGDEVIASEATEGLCTGNLFENNYIDGSEYGVYFSETRDIGVIGNTFTGSAENQWQDSDGVLWKDNVVDADFEMRSIDTCVDSDSDLDQIDPTGVEVDEC 1622
LL LL T V + G+IR+TECP+DA + T+SW NDG+ L +EG+GSCVT I+ +++ PL T +G+E ETGIWLLTK L MR GTTLLLH DL C ELR+ SSS++ + L G YIS+L TKV SWS S D G+ DGS PRSY+ +SE H SD CDGAA++D GE RLDIINS+VGYLGYQ+AE+YG+TYKV GYC DESNPEVFDRVNVRGDIRFS+IHHNWFG YSYGHQDGLWEYN M N GYYGFDPHDDSDNLRIHNNIVY+NGNHGIIASKR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G CIA+FESFGIE+SDN C N EGIRLSMG+SYNKIFDN +++T+ R+LWLY G DE+IAS AT+G+CTGNLF+NNY+DG+ GV FSETRD +IGNT G E+ DSDG+LW DN V+ DFE+ TC+ S+SD DQI G EC
Sbjct: 16 LLFLLLAGTRVQTGSAGSIRLTECPADAPEATFSWTNDGDYLYVEGDGSCVTLPDIYNGVDNPPLTYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVEESLIDDSDGLLWSDNEVEDDFEIGIETTCLSSESDFDQISAGGSNPSEC 501
BLAST of mRNA_F-serratus_M_contig11.930.1 vs. uniprot
Match: D7G1G2_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G2_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 1.460e-140 Identity = 244/406 (60.10%), Postives = 289/406 (71.18%), Query Frame = 3
Query: 405 IWLLTKSLIMRTGTTLLLHGDLDCEELRLVSSSSSFIELTAAGAYISLLGTKVVSWSRSGATVDLGSSDGSEPRSYIRCLSERIHSSDVCDGAANEDVGEGRLDIINSEVGYLGYQSAEAYGITYKVHGYCEDESNPEVFDRVNVRGDIRFSNIHHNWFGMYSYGHQDGLWEYNMMHNCGYYGFDPHDDSDNLRIHNNIVYKNGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVCIALFESFGIEVSDNFCNGNTEGIRLSMGASYNKIFDNVLLNTSSRALWLYKGGDEVIASEATEGLCTGNLFENNYIDGSEYGVYFSETRDIGVIGNTFTGSAENQWQDSDGVLWKDNVVDADFEMRSIDTCVDSDSDLDQIDPTGVEVDEC 1622
IWL+TK++ M +GTTLLLH DL C+ + SWS D G+ DG RS+I +SE H SD CDGAA++D GE R+DIINSEV YLGYQ++E+YGI+YKV GYC DESNPEVFDRVNVRGDIRFS+IHHNWFG YGFDPHDDSDNLRIHNNIVY+NGNHGIIASKR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G CIA+FESF IE+SDN C N EGIRLSMG+SYNKIFDN +++T+ R++W+Y G DEV AS AT+G+CTGNLF+NNY++GSE GV +ETRD +IGNTF + N+W+DSDG++W+DN +D DF+MR DTCV S+SD DQI+ G EC
Sbjct: 3 IWLMTKNIFMESGTTLLLHDDLGCD---------------------------LTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQASESYGISYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQQ-------------------YGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFDIEISDNLCTQNEEGIRLSMGSSYNKIFDNQVIDTAGRSIWMYLGSDEVEASAATDGMCTGNLFQNNYLEGSETGVAMTETRDTMLIGNTFIDTDNNEWKDSDGLVWRDNNIDGDFDMRFSDTCVTSESDFDQINGVGSNPSEC 362
BLAST of mRNA_F-serratus_M_contig11.930.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE) HSP 1 Score: 304 bits (778), Expect = 3.160e-93 Identity = 221/455 (48.57%), Postives = 285/455 (62.64%), Query Frame = 3
Query: 282 EELSIEGEGSCVTPSVIFK--------------NLEDA---PLVPMTAEGEEVAEETGIWLLTKSLIMRTGTTLLLHGDLDCEELRLVSSSSSFIELTAAGAYISLLGTKVVSWSRSGATVDLGSSDGSEPRSYIRCLSERIHSS-DVCDGAANEDVGEGRLDIINSEVGYLGYQSAEAYGITYKVHGYCEDESNPEVFDRVNVRGDIRFSNIHHNWFGMYSYGHQDGLWEYNMMHNCGYYGFDPHDDSDNLRIHNNIVYKNGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVCIALFESFGIEVSDNFCNGNTEGIRLSMGASYNKIFDNVLLNTSSRALWLYKGGDEVIASEATEGLCTGNLFENNYIDGSEYGVYFSETRDIGVIGNTFTGSAENQWQDSDGVLWKDNVVDADFEMRSIDTCVDSDSDLDQI 1592
+ L +EG G C+TPS I+ E+A P+ P+T +GE ETG WL T + + G L LH + +RL S S IEL A G ++SLL T++ SW A +S+ S PRSY+ +SE + S C G A D GE R DIINSEV +LG+ EAYGIT+KV G+C D SN ++FDRVNVRGDIRFS+IHHN+FGMY+YGHQDGLWEYN+MH YGFDPHDDSDNLRIHNNIV+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+FES + S+N C N G R S+GAS+NKI+DN + ++ +++Y+G D S+ GL + N+ NN ID + G+ +T GN T +A+ ++++S V+WKDN + A ++ S +C SDSD+ Q+
Sbjct: 46 DRLYLEG-GGCITPSDIYLAKLTNVTEDDGNTLTAEEAAAIPITPITKDGEFSDAETGYWLFTSDVYIYDGVKLELHAESGTTGMRL-KSDSKVIELRAHGGWLSLLNTELSSWDVDEADY---ASNYSAPRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAKYGFDPHDDSDNLRIHNNIVWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFESMEGDYSNNKCTDNKYGFRWSVGASHNKIYDNEVYDSQQYGIYMYEGSDLPYVSD---GLPSYNIIANNIIDTATEGIKMGDTVGNEFTGNVITNTADLRFRNSSEVIWKDNDIPAGVDIDSEGSCFTSDSDIVQL 492
BLAST of mRNA_F-serratus_M_contig11.930.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 271 bits (694), Expect = 1.180e-80 Identity = 170/448 (37.95%), Postives = 243/448 (54.24%), Query Frame = 3
Query: 282 EELSIEGEGSCVTPSVIFKNLED-APLVPMTAEGEEVAE-ETGIWLLTKSLIMRTGTTLLLHGDL---DCEELRLVSSSSSFIELTAAGAYISLLGTKVVSWSRSGATVDLGSSDGSEPRSYIRCLSERIHSSD-VCDGAANEDVGEGRLDIINSEVGYLGYQSAEAYGITYKVHGYCEDESNPEVFDRVNVRGDIRFSNIHHNWFGMYSYGHQDGLWEYNMMHNCGYYGFDPHDDSDNLRIHNNIVYKNGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GEVCIALFESFGIEVSDNFCNGNTEGIRLSMGASYNKIFDNVLLNTSSRALWLYKGGDEVIASEATEGLCTGNLFENNYIDGSEYGVYFSETRDIGVIGNTF-TGSAEN---QWQDSDGVLWKDN--VVDADFEMR-SIDTCVDSDSD 1580
E E G C T I+++ APL + + +V+E ETG WLLT+ L + G TL ++G D +ELRL+S+S ++I L A G + +GTKV SW S + D +DG RSYI +SE + D C+G A +GE R+DI NSE+GYLG+Q +E+YG+T+KV G+C+D+SNPE+FD VNV G++ S+IHH FG+Y+YGHQ G W N MH+ YGFDPHDDSD L IH+N VY NG HGIIASKR G+ +A+ ESF +VS+N N G+R+S+G + N +N++ N S + Y G DE + G N+F N G+E + E + N F G A+ ++ D+ + + N + + DFE++ + D+C D +SD
Sbjct: 63 ESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDG---RSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDE--PDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD 505
BLAST of mRNA_F-serratus_M_contig11.930.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 258 bits (658), Expect = 8.250e-76 Identity = 172/453 (37.97%), Postives = 229/453 (50.55%), Query Frame = 3
Query: 282 EELSIEGEGSCVTPSVIFKNLED-APLVPMTAEGEEVAEE-TGIWLLTKSLIMRTGTTLLLHGDL---DCEELRLVSSSSSFIELTAAGAYISLLGTKVVSWSRSGATVDLGSSDGSEPRSYIRCLSERIHSS-DVCDGAANEDVGEGRLDIINSEVGYLGYQSAEAYGITYKVHGYCEDESNPEVFDRVNVRGDIRFSNIHHNWFGMYSYGHQDGLWEYNMMHNCGYYGFDPHDDSDNLRIHNNIVYKNGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GEVCIALFESFGIEVSDNFCNGNTEGIRLSMGASYNKIFDNVLLNTSSRALWLYKGGD--EVIASEATEGLCTGNLFENNYIDGSEYGVYFSETRDIGVIGNTFTGSAENQWQDSDGVLWKDNVVDADFEMRSIDTCVDSDSDLDQIDPTGVE 1610
E + G CVT I++ D +PL + + +V+ TG WLLT+ + + G TL +HG D +ELRL+S+S +FI L A G + L TKV +W S D SDG RSYI +SE I C+G A ++GE R+DI NSE+ YLGY E YG+T+KV G+C D+ NPE+FD VNV G+I S+IHHN FG+Y+YGHQ G W N MH+ YGFDPHDDSD L IH+N V+ NG HGIIASKR G+ +A+ ESF +VSDN N G+RLS+G N NV+ ++ + Y G D EV+ S G N+F N I G + E I NTF +A ++ D+ L N AD ++ VD + D+ G E
Sbjct: 30 ESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDG---RSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDS----GRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLK-----VDRGATFDESSDHGFE 470
BLAST of mRNA_F-serratus_M_contig11.930.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 258 bits (660), Expect = 8.340e-76 Identity = 173/424 (40.80%), Postives = 240/424 (56.60%), Query Frame = 3
Query: 282 EELSIEGEGSCVTPSVIFKNLE-DAPLVPMTAEGEEVAEE-TGIWLLTKSLIMRTGTTLLLHGDL---DCEELRLVSSSSSFIELTAAGAYISLLGTKVVSWSRSGATVDLGSSDGSEPRSYIRCLSERI-HSSDVCDGAANEDVGEGRLDIINSEVGYLGYQSAEAYGITYKVHGYCEDESNPEVFDRVNVRGDIRFSNIHHNWFGMYSYGHQDGLWEYNMMHNCGYYGFDPHDDSDNLRIHNNIVYKNGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--EVCIALFESFGIEVSDNFCNGNTEGIRLSMGASYNKIFDNVLLNTSSRALWLYKGGD--EVIASEATEGLCTGNLFENNYIDGSEYGVYFSETRDIGVIGNTFTGSAENQWQDSDGVLWKDNV 1523
E + G CVT I+++ +APL + ++ ++++ TG WLLT+ L + G TL +HG D +ELRL+S+S +FI L A G + L TKV +W S D DG RSY+ +SE I S C+G A ++GE R+DI +SE+GYLGY +E+YG+T+KV G+C D+SN ++F+ VNV G+I S+IHHN FG+Y+YGHQ G W N MH+ YGFDPHDDSD L IH+N VY NG HGIIASKR XXXXXXXXXXXXX + +A+ ESF +VSDN N GIR S+G+ N F+NV+ ++ + + Y G D +V+ S G N+F+ N I G + + I NTF + ++ D+ L N+
Sbjct: 56 ESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDG---RSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDS----GRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNI 472
BLAST of mRNA_F-serratus_M_contig11.930.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 256 bits (653), Expect = 2.210e-75 Identity = 157/398 (39.45%), Postives = 213/398 (53.52%), Query Frame = 3
Query: 381 EEVAEETGIWLLTKSLIMRTGTTLLLHGDL---DCEELRLVSSSSS-FIELTAAGAYISLLGTKVVSWSRSGATVDLGSSDGSEPRSYIRCLSERIHSSDVCDGAANEDVGEGRLDIINSEVGYLGYQSAEAYGITYKVHGYCEDESNPEVFDRVNVRGDIRFSNIHHNWFGMYSYGHQDGLWEYNMMHNCGYYGFDPHDDSDNLRIHNNIVYKNGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GEVCIALFESFGIEVSDNFCNGNTEGIRLSMGASYNKIFDNVLLNTSSRALWLYKGGDEVIASEATEGLCTGNLFENNYIDGSEYGVYFSETRDIGVIGNTFTGSAENQWQDSDGVLWKDNVVDADFEMRSID 1556
E TG WLLT L + G TL G +C ELR+ S+S S F E+ G + T V SW G DG RS+IRC+SE + D C A ++GE R+DII+SE+GYLGY ++EAYGIT+KV G+C D SNP+VFD VNV GD++ S+IHH ++GMYS+GHQ G+W N+MH+ YGFDPHDDSD L I N VY N NHGIIASKR G+ IA+ E+ G ++ DN +G GIR+ +G+S NK+ DNV N + ++ Y G DE G N F NN I +E GV E+ +I + N F+G+ E ++ ++ ++W N + + + ID
Sbjct: 44 ETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDG---RSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG---GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDID 432
BLAST of mRNA_F-serratus_M_contig11.930.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 256 bits (653), Expect = 1.120e-74 Identity = 166/446 (37.22%), Postives = 231/446 (51.79%), Query Frame = 3
Query: 306 GSCVTPSVIFKNLED-APLVPMTAEGEEVAEE-TGIWLLTKSLIMRTGTTLLLHGDL---DCEELRLVSSSSSFIELTAAGAYISLLGTKVVSWSRSGATVDLGSSDGSEPRSYIRCLSERIHSSD-VCDGAANEDVGEGRLDIINSEVGYLGYQSAEAYGITYKVHGYCEDESNPEVFDRVNVRGDIRFSNIHHNWFGMYSYGHQDGLWEYNMMHNCGYYGFDPHDDSDNLRIHNNIVYKNGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GEVCIALFESFGIEVSDNFCNGNTEGIRLSMGASYNKIFDNVLLNTSSRALWLYKGGDEVIASEATEGLCTGNLFENNYIDGSEYGVYFSETRDIGVIGNTFTGSAENQWQDSDGVLWK-DNVV-----------DADFEMR-SIDTCVDSDSD 1580
G CVT I+++ PL + + V+ TG WLLT+ L + G TL ++G D +ELRL+S++ +FI L A G + + TKV SW S + D +DG RSYI +SE I D C+G A +GE R+DI +SE+GYLGY +E+YG+T+KV G+CED+SNPEVFD VNV G++ S+IHH FG+Y+YGHQ G W N MH+ YGFDPHDDSD L IH+N VY NG HGIIASKR G+ +A+ ESF +VS+N N G+R S+G + N +N + N + + Y G DE + G N+F N G+E + E + N F + D+DG++ + DN D +FE++ D C D ++D
Sbjct: 67 GGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDG---RSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDE--PDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF------EVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEAD 501
BLAST of mRNA_F-serratus_M_contig11.930.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 248 bits (632), Expect = 1.050e-71 Identity = 181/469 (38.59%), Postives = 247/469 (52.67%), Query Frame = 3
Query: 216 AIRITECPSDATDPTYSWDNDGEELSIEG-----EGSCVTPSVIFKNLED-APLVPMTAEGEEVAEE-TGIWLLTKSLIMRTGTTLLLHGDL---DCEELRLVSSSSSFIELTAAGAYISLLGTKVVSWSRSGATVDLGSSDGSEPRSYIRCLSERI-HSSDVCDGAANEDVGEGRLDIINSEVGYLGYQSAEAYGITYKVHGYCEDESNPEVFDRVNVRGDIRFSNIHHNWFGMYSYGHQDGLWEYNMMHNCGYYGFDPHDDSDNLRIHNNIVYKNGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GEVCIALFESFGIEVSDNFCNGNTEGIRLSMGASYNKIFDNVLLNTSSRALWLYKGGDEVIASEATEGLCTGNLFENNYIDGSEYGVYFSETRDIGVIGNTFTGSAENQWQDSDGVLWKDNVVDADFEMRSID-TCVDSDSD 1580
AI C S +T + + + L +E G CVT I+++L+ APL + +V+ TG WLLT+SL + G TL +HG +ELRL+S+S FI L A G + + TKV +W S V +D S+ RSYI +SE I S CDG A +++GE R+DI +SE+ YLGY +E+YG+T+KV G C D SN EVFD VNV G+I S+IHHN+FG+Y+YGH+ G W N MH+ YGFDPHDDSD L IH+N VY NGNHGIIASKR XXXXXXXXXX G+ +AL E+F +VS+N N GIR+S+G + N N + +S ++ Y+G D ++ G G + V + I NTF + +++D G L N ++ D +C D SD
Sbjct: 30 AIAKPSCKS-STKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVR---TDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDS--GRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSD 492
BLAST of mRNA_F-serratus_M_contig11.930.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 245 bits (625), Expect = 1.200e-70 Identity = 183/471 (38.85%), Postives = 255/471 (54.14%), Query Frame = 3
Query: 216 AIRITECPSDATDPTYSWDNDGEELSIEG-----EGSCVTPSVIFKNLE-DAPLVPMT-AEGEEVAEETGIWLLTKSLIMRTGTTLLLHGDL---DCEELRLVSSSSSFIELTAAGAYISLLGTKVVSWSRSGATVDLGSSDGSEPRSYIRCLSERI-HSSDVCDGAANEDVGEGRLDIINSEVGYLGYQSAEAYGITYKVHGYCEDESNPEVFDRVNVRGDIRFSNIHHNWFGMYSYGHQDGLWEYNMMHNCGYYGFDPHDDSDNLRIHNNIVYKNGNHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GEVCIALFESFGIEVSDNFCNGNTEGIRLSMGASYNKIFDNVLLNTSSRALWLYKGGDEVIASEATEGLCTGNLFENNYIDGSEYGVYFSETRDIGVIGNTFTGSAENQWQDSDGVLWKDNVVDADFEMR-SIDTCVDSDSDLD 1586
AI C S +T + + + L +E G CVT I+K+L+ APL + + G+ + TG WLLT+ L + G TL +HG + ELRL+S+S FI L A G + + TKV +W S V +DGS+ RSYI +SE I S + CDG A + +GE R+DI +SE+ YLGYQ +E+YG+T+KV G+C+D SNPEVFD VNV G+I S+IHHN FG+Y+YGH+ G W N MH+ YGFDPHDDSD L IH+N V XXXXXXXXXXXXX XXX G+ +AL ESF +VS+N N G+RLS+G + N NV+ ++S ++ Y+G D+ ++ G N+F +N I G + + + I NTF + +++D++ L N ++ S C D SD D
Sbjct: 33 AISKPSCKS-STKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVR---TDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDS--GRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSD 497 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig11.930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig11.930.1 >prot_F-serratus_M_contig11.930.1 ID=prot_F-serratus_M_contig11.930.1|Name=mRNA_F-serratus_M_contig11.930.1|organism=Fucus serratus male|type=polypeptide|length=493bp MRSRVALLPSLLCLTCVVGTALGAIRITECPSDATDPTYSWDNDGEELSIback to top mRNA from alignment at F-serratus_M_contig11:1113022..1146735+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig11.930.1 ID=mRNA_F-serratus_M_contig11.930.1|Name=mRNA_F-serratus_M_contig11.930.1|organism=Fucus serratus male|type=mRNA|length=33714bp|location=Sequence derived from alignment at F-serratus_M_contig11:1113022..1146735+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig11:1113022..1146735+ >mRNA_F-serratus_M_contig11.930.1 ID=mRNA_F-serratus_M_contig11.930.1|Name=mRNA_F-serratus_M_contig11.930.1|organism=Fucus serratus male|type=CDS|length=2958bp|location=Sequence derived from alignment at F-serratus_M_contig11:1113022..1146735+ (Fucus serratus male)back to top |