mRNA_F-serratus_M_contig11.920.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig11.920.1
Unique NamemRNA_F-serratus_M_contig11.920.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig11.920.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 1.600e-53
Identity = 124/302 (41.06%), Postives = 174/302 (57.62%), Query Frame = 1
Query:    7 VRSKARAAARSKELMVATWNIRTMPERGTNGPGH-AEDLLMFTAKHECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGTLGVGLAVRESIVRALGPDGIVPEHISAWLLKVRVIFKHRTTTTFIVGYAPTEAAA------ICHKSKFWNELRSTVAEVAASEHLVLMMDANARTGGRGEGGRLRDVRVLGPYGKNTLNDNGSRLLACAAEYKVSIVNTFFSKPKRGESSDAFTYEGPKEFHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNHRRR 885
            V++ A+  AR  +L   T+N+RT+   G N  GH    ++   A  +CD I +QETRR G+  I     GYV+  SG   G   K G  GVG+A++E++  ++G  G   E IS  L+KVR+        TF+VGYAPTE A       +  K  FW  L + + EV + +HLV++MDANARTG R +G    D +++G YG++ +N+NG RLL  AA+ ++S++NT+F  PK G      +    KE HR  LD+IL+RQ DRRLVRN +V       SDH LV  ++R   R APN R R
Sbjct:   77 VKATAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTR 372          
BLAST of mRNA_F-serratus_M_contig11.920.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 3.070e-53
Identity = 118/300 (39.33%), Postives = 173/300 (57.67%), Query Frame = 1
Query:    7 VRSKARAAARSKELMVATWNIRTMPERGTNGPGH-AEDLLMFTAKHECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGTLGVGLAVRESIVRALGPDGIVPEHISAWLLKVRVIFKHRTTTTFIVGYAPTEAAAICH------KSKFWNELRSTVAEVAASEHLVLMMDANARTGGRGEGGRLRDVRVLGPYGKNTLNDNGSRLLACAAEYKVSIVNTFFSKPKRGESSDAFTYEGPKEFHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNHR 879
            V++ A+  AR  +L   T+N+RT+   G N  GH    ++   +   CD I +QETRR G+ +I     GYV+  SG   G   K G  GVG+A++E++  ++G +G   E IS  L+KVR+        TF+VGYAPTE            K  FW  L + + EV + +HLV++MDANARTG R +G    D +++G YG++ +N+NG RLL  A++ ++S+ NT+F  PK G      +    KE  ++RLD+I +RQ DRR VRN++V       SDH+LV  ++RL  R APN R
Sbjct:  162 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKE--KYRLDFIFMRQADRRFVRNVSVKRVDFKDSDHKLVLTTVRLPPRVAPNRR 455          
BLAST of mRNA_F-serratus_M_contig11.920.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 1.520e-52
Identity = 116/300 (38.67%), Postives = 171/300 (57.00%), Query Frame = 1
Query:    7 VRSKARAAARSKELMVATWNIRTMPERGTNGPGH-AEDLLMFTAKHECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGTLGVGLAVRESIVRALGPDGIVPEHISAWLLKVRVIFKHRTTTTFIVGYAPTEAAA------ICHKSKFWNELRSTVAEVAASEHLVLMMDANARTGGRGEGGRLRDVRVLGPYGKNTLNDNGSRLLACAAEYKVSIVNTFFSKPKRGESSDAFTYEGPKEFHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNHR 879
            V++ A+  AR  +L   T+N+RT+   G N  GH    ++   +   CD I +QETRR G+ +I     GYV+  SG   G   K G  GVG+ ++E++  ++G +G   E I   L+KVR+         F+VGYAPTE         +  K  FW  L + + EV + +HLV++MDANARTG R +G    D +++G YG++ +N+NG RLL  A++ ++S+ NT+F  PK G      +    KE  ++RLD+IL+RQ DRR VRN++V       SDH LV  ++RL  R APN R
Sbjct:   68 VKAAAKRKAREGDLSFGTFNVRTLACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKE--KYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRR 361          
BLAST of mRNA_F-serratus_M_contig11.920.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 2.290e-52
Identity = 119/300 (39.67%), Postives = 174/300 (58.00%), Query Frame = 1
Query:    7 VRSKARAAARSKELMVATWNIRTMPERGTNGPGH-AEDLLMFTAKHECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGTLGVGLAVRESIVRALGPDGIVPEHISAWLLKVRVIFKHRTTTTFIVGYAPTEAAAICH------KSKFWNELRSTVAEVAASEHLVLMMDANARTGGRGEGGRLRDVRVLGPYGKNTLNDNGSRLLACAAEYKVSIVNTFFSKPKRGESSDAFTYEGPKEFHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNHR 879
            V++ A+  AR  +L   T+++RT+   G N  GH    ++  ++   CD I +QETRR+G+ +I     GYV+  SG   G   K G  GVG+A++E++   +G +G   E IS  L+KVR+        TF+VGYAPTE   I        K  FW  L + + EV + +HLV++MDANARTG R +G    D +++G YG++ +N+NG RLL  A++ ++S+ NT+F  PK G           KE  ++RLD+IL+RQ DRR VRN++V       SDH LV  ++RL  R APN R
Sbjct:  142 VKAAAKKKAREGDLSFGTFSVRTLVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQCSNKGKE--KYRLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLRPRVAPNRR 435          
BLAST of mRNA_F-serratus_M_contig11.920.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 8.000e-50
Identity = 115/292 (39.38%), Postives = 168/292 (57.53%), Query Frame = 1
Query:   31 ARSKELMVATWNIRTMPERGTNGPGH-AEDLLMFTAKHECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGTLGVGLAVRESIVRALGPDGIVPEHISAWLLKVRVIFKHRTTTTFIVGYAPTEAAA------ICHKSKFWNELRSTVAEVAASEHLVLMMDANARTGGRGEGGRLRDVRVLGPYGKNTLNDNGSRLLACAAEYKVSIVNTFFSKPKRGESSDAFTYEGPKEFHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNHR 879
            AR  +L   T+N+ T+   G N  GH    ++   +   CD I +QETRR+G+ +I     GYV+  SG   G   K G  GVG+A++E++  ++G +G   E IS  L+KVR+        TF+V YAPTE         +  K  FW  L + + EV + +HLV++MDANARTG R +G    D +++G YG++ +N+NG RLL  A++ ++S+ NT+F  PK G      +    KE  ++RLD+IL+RQ DRR VRN++V       SDH LV  ++RL  R APN R
Sbjct:  652 AREGDLSFGTFNVCTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKE--KYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRR 937          
BLAST of mRNA_F-serratus_M_contig11.920.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 8.780e-50
Identity = 115/300 (38.33%), Postives = 170/300 (56.67%), Query Frame = 1
Query:    7 VRSKARAAARSKELMVATWNIRTMPERGTNGPGH-AEDLLMFTAKHECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGTLGVGLAVRESIVRALGPDGIVPEHISAWLLKVRVIFKHRTTTTFIVGYAPTEAAA------ICHKSKFWNELRSTVAEVAASEHLVLMMDANARTGGRGEGGRLRDVRVLGPYGKNTLNDNGSRLLACAAEYKVSIVNTFFSKPKRGESSDAFTYEGPKEFHRWRLDYILVRQHDRRLVRNITVH--PKMKSDHRLVSASIRLLGRNAPNHR 879
            V++ A+  AR  +L   T+N+RT+   G N  GH    ++   +   CD I +QETRR G+ +I     GYV+  SG   G   K G  GVG+A++E++  ++G +G   E IS  L+KVR+        TF+VGYAPTE         +  K  FW  L + + EV + +HLV++MDANARTG R +G    D +++G YG++ +N+NG RLL  A++ ++S+ NT+   PK G      +    KE  ++RLD IL+RQ DRR VRN++V        DH LV  ++R   R AP+ R
Sbjct:   73 VKAAAKKKAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYVQTPKGGVQHTFQSSNKGKE--KYRLDLILMRQTDRRFVRNVSVKCVDFKDPDHNLVLTTVRRPPRVAPHRR 366          
BLAST of mRNA_F-serratus_M_contig11.920.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 6.850e-49
Identity = 107/262 (40.84%), Postives = 152/262 (58.02%), Query Frame = 1
Query:  118 LLMFTAKHECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGTLGVGLAVRESIVRALGPDGIVPEHISAWLLKVRVIFKHRTTTTFIVGYAPTEAAA------ICHKSKFWNELRSTVAEVAASEHLVLMMDANARTGGRGEGGRLRDVRVLGPYGKNTLNDNGSRLLACAAEYKVSIVNTFFSKPKRGESSDAFTYEGPKEFHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNHR 879
            ++   +   CD I +QETRR+G+ +I     GYV+  SG   G   K G  GVG+A++E++  ++G +G   E IS  L+KVR+        TF+VGYAPTE         +  K  FW  L + + EV + +HLV++MDANARTG R  G    D +VLG YG++ +N+NG RL   A++ + S+ NT+F  PK G      +    KE  ++RLD+IL+RQ DRR VRN++V       SDH LV  ++RL  R APN R
Sbjct:    3 VMQICSATGCDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRGG--CCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTFQSSNKGKE--KYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRR 258          
BLAST of mRNA_F-serratus_M_contig11.920.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.080e-47
Identity = 104/262 (39.69%), Postives = 152/262 (58.02%), Query Frame = 1
Query:  118 LLMFTAKHECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGTLGVGLAVRESIVRALGPDGIVPEHISAWLLKVRVIFKHRTTTTFIVGYAPTEAAA------ICHKSKFWNELRSTVAEVAASEHLVLMMDANARTGGRGEGGRLRDVRVLGPYGKNTLNDNGSRLLACAAEYKVSIVNTFFSKPKRGESSDAFTYEGPKEFHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNHR 879
            ++   +   CD I +QETRR+G+ ++     GYV+  SG   G   K G  GVG+A++E++  ++G  G   E I+  L+KVR+        TF+VGYAPTE         +  K  FW  L   + EV + +HLV++MDANARTG R +G    D +++G YG++ +N+NG RLL  A+  ++S+ NT+F  PK G      +    KE  ++RLD+IL+RQ DRR VRN++V       SDH LV  ++RL  R APN R
Sbjct:    3 VMQLCSATGCDVIGLQETRREGQGSLAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPKGGVQHTFQSSNKGKE--KYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRR 258          
BLAST of mRNA_F-serratus_M_contig11.920.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 2.180e-47
Identity = 111/264 (42.05%), Postives = 154/264 (58.33%), Query Frame = 1
Query:  118 LLMFTAKHECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGTLGVGLAVRESIVRALGPDGIVPEHISAWLLKVRVIFKHRTTTTFIVGYAPTEAAA------ICHKSKFWNELRSTVAEVAASEHLVLMMDANARTGGRGEGGRLRDVRVLGPYGKNTLNDNGSRLLACAAEYKVSIVNTFFSKPKRGESSDAFTYEGPKEFHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNHRRR 885
            ++   A  +CD I +QETRR G+  I     GYV+  SG   G   K G  GVG+A++E++  ++G  G   E IS  L+KVR+        TF+VGYAPTE A       +  K  FW  L + + EV + +HLV++MDANARTG R +G    D +++G YG++ +N+NG RLL  AA+ ++S++NT+F  PK G      +    KE HR  LD+IL+RQ DRRLVRN +V       SDH LV  ++R   R APN R R
Sbjct:    3 VMQICAATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTR 260          
BLAST of mRNA_F-serratus_M_contig11.920.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 7.030e-47
Identity = 103/262 (39.31%), Postives = 154/262 (58.78%), Query Frame = 1
Query:  118 LLMFTAKHECDFIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGTLGVGLAVRESIVRALGPDGIVPEHISAWLLKVRVIFKHRTTTTFIVGYAPTEAAA------ICHKSKFWNELRSTVAEVAASEHLVLMMDANARTGGRGEGGRLRDVRVLGPYGKNTLNDNGSRLLACAAEYKVSIVNTFFSKPKRGESSDAFTYEGPKEFHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRLLGRNAPNHR 879
            ++   +   CD   +QETRR+G+ +I     GYV+  SG   G   K G  GVG+A++E++  ++G +G   E IS  L+KVR+        TF++GYAPTE         +  K  FW  L + + EV + +HLV++MDANARTG R +G    D +++G YG++ +N+NG RLL  A++ ++S+ NT+F  PK G      +    KE  ++RLD+IL+RQ DRR VR+++V       SDH LV  ++RL  R APN R
Sbjct:    3 VMQICSATGCDVTGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKE--KYRLDFILMRQTDRRFVRDVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRR 258          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig11.920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQH5_9PHAE1.600e-5341.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3Q1_9PHAE3.070e-5339.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KV75_9PHAE1.520e-5238.67Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JVN7_9PHAE2.290e-5239.67Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K1H7_9PHAE8.000e-5039.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMB4_9PHAE8.780e-5038.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KBZ6_9PHAE6.850e-4940.84Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K259_9PHAE1.080e-4739.69Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KC90_9PHAE2.180e-4742.05Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSV0_9PHAE7.030e-4739.31Endo/exonuclease/phosphatase domain-containing pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig11contigF-serratus_M_contig11:833827..834714 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score112.5
Seed ortholog evalue3.5e-22
Seed eggNOG ortholog6412.HelroP161862
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Endonuclease/Exonuclease/phosphatase family
EggNOG OGs39VM0@33154,3BPUP@33208,3D6HY@33213,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Exons1
Model size888
Cds size888
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928962.89161-CDS-F-serratus_M_contig11:833826..8347141622928962.89161-CDS-F-serratus_M_contig11:833826..834714Fucus serratus maleCDSF-serratus_M_contig11 833827..834714 +
1690962648.2952895-CDS-F-serratus_M_contig11:833826..8347141690962648.2952895-CDS-F-serratus_M_contig11:833826..834714Fucus serratus maleCDSF-serratus_M_contig11 833827..834714 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig11.920.1prot_F-serratus_M_contig11.920.1Fucus serratus malepolypeptideF-serratus_M_contig11 833827..834714 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig11.920.1

>prot_F-serratus_M_contig11.920.1 ID=prot_F-serratus_M_contig11.920.1|Name=mRNA_F-serratus_M_contig11.920.1|organism=Fucus serratus male|type=polypeptide|length=296bp
RVVRSKARAAARSKELMVATWNIRTMPERGTNGPGHAEDLLMFTAKHECD
FIAIQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGKPGTLGVGLAVRESI
VRALGPDGIVPEHISAWLLKVRVIFKHRTTTTFIVGYAPTEAAAICHKSK
FWNELRSTVAEVAASEHLVLMMDANARTGGRGEGGRLRDVRVLGPYGKNT
LNDNGSRLLACAAEYKVSIVNTFFSKPKRGESSDAFTYEGPKEFHRWRLD
YILVRQHDRRLVRNITVHPKMKSDHRLVSASIRLLGRNAPNHRRRP
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mRNA from alignment at F-serratus_M_contig11:833827..834714+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig11.920.1 ID=mRNA_F-serratus_M_contig11.920.1|Name=mRNA_F-serratus_M_contig11.920.1|organism=Fucus serratus male|type=mRNA|length=888bp|location=Sequence derived from alignment at F-serratus_M_contig11:833827..834714+ (Fucus serratus male)
CGTGTGGTTCGCTCGAAGGCGAGGGCAGCAGCACGTTCGAAGGAGCTGAT GGTTGCCACATGGAACATCCGCACCATGCCCGAGAGAGGGACCAACGGCC CGGGGCACGCGGAGGATCTTTTGATGTTCACCGCGAAGCACGAGTGCGAT TTCATTGCCATACAGGAGACTCGCCGCGATGGAAGGACAACCATCCAAGC ACCAGCCGCTGGTTATGTCGTGCACTGCAGCGGTCATTGCGATGGTGATG GAGGTAAGCCCGGAACACTCGGAGTTGGTCTGGCTGTCAGGGAGTCTATC GTTCGCGCACTCGGCCCAGATGGCATTGTGCCGGAACACATCAGTGCGTG GCTGTTGAAGGTGAGGGTGATCTTCAAACACAGAACCACCACAACCTTCA TCGTTGGATACGCCCCGACTGAAGCAGCAGCCATCTGTCACAAGTCTAAG TTCTGGAACGAACTTCGTAGCACTGTTGCTGAGGTGGCTGCCAGCGAGCA CTTGGTTTTGATGATGGATGCTAACGCCCGTACGGGAGGAAGGGGGGAGG GAGGTAGACTAAGGGATGTCCGGGTTTTGGGACCATACGGCAAAAACACT CTCAATGACAACGGGTCGCGACTTCTAGCATGTGCTGCCGAGTACAAGGT GTCGATTGTCAACACCTTTTTCAGCAAGCCGAAACGTGGGGAAAGCTCGG ATGCGTTCACATACGAGGGGCCGAAGGAATTCCATCGCTGGCGCCTGGAC TACATCCTGGTACGCCAGCATGACCGCAGGCTCGTCAGGAATATCACTGT CCACCCGAAGATGAAATCAGACCATCGCCTGGTTTCAGCTTCCATCCGCC TCCTAGGACGGAACGCACCCAACCACCGTCGGAGACCG
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Coding sequence (CDS) from alignment at F-serratus_M_contig11:833827..834714+

>mRNA_F-serratus_M_contig11.920.1 ID=mRNA_F-serratus_M_contig11.920.1|Name=mRNA_F-serratus_M_contig11.920.1|organism=Fucus serratus male|type=CDS|length=1776bp|location=Sequence derived from alignment at F-serratus_M_contig11:833827..834714+ (Fucus serratus male)
CGTGTGGTTCGCTCGAAGGCGAGGGCAGCAGCACGTTCGAAGGAGCTGAT
GGTTGCCACATGGAACATCCGCACCATGCCCGAGAGAGGGACCAACGGCC
CGGGGCACGCGGAGGATCTTTTGATGTTCACCGCGAAGCACGAGTGCGAT
TTCATTGCCATACAGGAGACTCGCCGCGATGGAAGGACAACCATCCAAGC
ACCAGCCGCTGGTTATGTCGTGCACTGCAGCGGTCATTGCGATGGTGATG
GAGGTAAGCCCGGAACACTCGGAGTTGGTCTGGCTGTCAGGGAGTCTATC
GTTCGCGCACTCGGCCCAGATGGCATTGTGCCGGAACACATCAGTGCGTG
GCTGTTGAAGGTGAGGGTGATCTTCAAACACAGAACCACCACAACCTTCA
TCGTTGGATACGCCCCGACTGAAGCAGCAGCCATCTGTCACAAGTCTAAG
TTCTGGAACGAACTTCGTAGCACTGTTGCTGAGGTGGCTGCCAGCGAGCA
CTTGGTTTTGATGATGGATGCTAACGCCCGTACGGGAGGAAGGGGGGAGG
GAGGTAGACTAAGGGATGTCCGGGTTTTGGGACCATACGGCAAAAACACT
CTCAATGACAACGGGTCGCGACTTCTAGCATGTGCTGCCGAGTACAAGGT
GTCGATTGTCAACACCTTTTTCAGCAAGCCGAAACGTGGGGAAAGCTCGG
ATGCGTTCACATACGAGGGGCCGAAGGAATTCCATCGCTGGCGCCTGGAC
TACATCCTGGTACGCCAGCATGACCGCAGGCTCGTCAGGAATATCACTGT
CCACCCGAAGATGAAATCAGACCATCGCCTGGTTTCAGCTTCCATCCGCC
TCCTAGGACGGAACGCACCCAACCACCGTCGGAGACCGCGTGTGGTTCGC
TCGAAGGCGAGGGCAGCAGCACGTTCGAAGGAGCTGATGGTTGCCACATG
GAACATCCGCACCATGCCCGAGAGAGGGACCAACGGCCCGGGGCACGCGG
AGGATCTTTTGATGTTCACCGCGAAGCACGAGTGCGATTTCATTGCCATA
CAGGAGACTCGCCGCGATGGAAGGACAACCATCCAAGCACCAGCCGCTGG
TTATGTCGTGCACTGCAGCGGTCATTGCGATGGTGATGGAGGTAAGCCCG
GAACACTCGGAGTTGGTCTGGCTGTCAGGGAGTCTATCGTTCGCGCACTC
GGCCCAGATGGCATTGTGCCGGAACACATCAGTGCGTGGCTGTTGAAGGT
GAGGGTGATCTTCAAACACAGAACCACCACAACCTTCATCGTTGGATACG
CCCCGACTGAAGCAGCAGCCATCTGTCACAAGTCTAAGTTCTGGAACGAA
CTTCGTAGCACTGTTGCTGAGGTGGCTGCCAGCGAGCACTTGGTTTTGAT
GATGGATGCTAACGCCCGTACGGGAGGAAGGGGGGAGGGAGGTAGACTAA
GGGATGTCCGGGTTTTGGGACCATACGGCAAAAACACTCTCAATGACAAC
GGGTCGCGACTTCTAGCATGTGCTGCCGAGTACAAGGTGTCGATTGTCAA
CACCTTTTTCAGCAAGCCGAAACGTGGGGAAAGCTCGGATGCGTTCACAT
ACGAGGGGCCGAAGGAATTCCATCGCTGGCGCCTGGACTACATCCTGGTA
CGCCAGCATGACCGCAGGCTCGTCAGGAATATCACTGTCCACCCGAAGAT
GAAATCAGACCATCGCCTGGTTTCAGCTTCCATCCGCCTCCTAGGACGGA
ACGCACCCAACCACCGTCGGAGACCG
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