mRNA_F-serratus_M_contig11.909.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig11.909.1 vs. uniprot
Match: D7G1H6_ECTSI (cwf21 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H6_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 4.070e-10 Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 1
Query: 1 MDSHVRGMQKEEENRRMREAFGLGEDYAAGEAFDEETQARK 123
MDSH+R ++K ++NRRMREAFGLG+DYAAGEAFDEE Q RK
Sbjct: 160 MDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 200
BLAST of mRNA_F-serratus_M_contig11.909.1 vs. uniprot
Match: A0A6H5KXT9_9PHAE (cwf21 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT9_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 4.160e-10 Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 1
Query: 1 MDSHVRGMQKEEENRRMREAFGLGEDYAAGEAFDEETQARK 123
MDSH+R ++K ++NRRMREAFGLG+DYAAGEAFDEE Q RK
Sbjct: 128 MDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 168
BLAST of mRNA_F-serratus_M_contig11.909.1 vs. uniprot
Match: A0A8K1CKR8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKR8_PYTOL) HSP 1 Score: 56.6 bits (135), Expect = 1.220e-6 Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 1
Query: 7 SHVRGMQKEEENRRMREAFGLGEDYAAGEAFDEETQARKKEAR 135
+H R +KEEENRRM+EAFG+ ED+ GE+FD E QA+++E R
Sbjct: 123 THARAQRKEEENRRMKEAFGIAEDHVPGESFDPEMQAKRREER 165
BLAST of mRNA_F-serratus_M_contig11.909.1 vs. uniprot
Match: A0A2D4CDA7_PYTIN (cwf21 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDA7_PYTIN) HSP 1 Score: 52.8 bits (125), Expect = 2.270e-5 Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 7 SHVRGMQKEEENRRMREAFGLGEDYAAGEAFDEETQARKKEAR 135
SH R +KEEENRRM+EAFG+ +DYA GE+FD E ++K R
Sbjct: 123 SHARAQRKEEENRRMKEAFGIEDDYAPGESFDPELIKKRKMER 165
BLAST of mRNA_F-serratus_M_contig11.909.1 vs. uniprot
Match: A0A329RLF0_9STRA (cwf21 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RLF0_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 3.620e-5 Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 7 SHVRGMQKEEENRRMREAFGLGEDYAAGEAFDEETQARKKEAR 135
SH R +KEEEN+R+++AFG+ DY AGE+FD E Q R+++ R
Sbjct: 125 SHARQKRKEEENKRIKDAFGIATDYVAGESFDPEMQERRRQER 167
BLAST of mRNA_F-serratus_M_contig11.909.1 vs. uniprot
Match: A0A8J5ME78_9STRA (cwf21 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5ME78_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 3.900e-5 Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 7 SHVRGMQKEEENRRMREAFGLGEDYAAGEAFDEETQARKKEAR 135
SH R +KEEEN+R+++AFG+ DY AGE+FD E Q R+++ R
Sbjct: 125 SHARQKRKEEENKRIKDAFGIATDYVAGESFDPEMQERRRQER 167
BLAST of mRNA_F-serratus_M_contig11.909.1 vs. uniprot
Match: A0A662WJV3_9STRA (cwf21 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJV3_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 5.490e-5 Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 7 SHVRGMQKEEENRRMREAFGLGEDYAAGEAFDEETQARKKEAR 135
SH R +KEEEN R+++AFG+ DY AGE+FD E Q R+++ R
Sbjct: 125 SHARRQRKEEENARLKDAFGIAADYVAGESFDPEMQERRRQER 167
BLAST of mRNA_F-serratus_M_contig11.909.1 vs. uniprot
Match: A0A662Y4J7_9STRA (cwf21 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4J7_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 5.550e-5 Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 7 SHVRGMQKEEENRRMREAFGLGEDYAAGEAFDEETQARKKEAR 135
SH R +KEEEN R+++AFG+ DY AGE+FD E Q R+++ R
Sbjct: 125 SHARRQRKEEENARLKDAFGIAADYVAGESFDPEMQERRRQER 167
BLAST of mRNA_F-serratus_M_contig11.909.1 vs. uniprot
Match: A0A0W8DC02_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DC02_PHYNI) HSP 1 Score: 50.1 bits (118), Expect = 8.270e-5 Identity = 21/43 (48.84%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 7 SHVRGMQKEEENRRMREAFGLGEDYAAGEAFDEETQARKKEAR 135
+H R +KEE+N+R+++AFG+ DY AGE+FD E Q R+++ R
Sbjct: 95 THARQKRKEEDNKRIKDAFGIATDYVAGESFDPEMQERRRQER 137
BLAST of mRNA_F-serratus_M_contig11.909.1 vs. uniprot
Match: G4Z8N6_PHYSP (cwf21 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z8N6_PHYSP) HSP 1 Score: 50.8 bits (120), Expect = 9.390e-5 Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 7 SHVRGMQKEEENRRMREAFGLGEDYAAGEAFDEETQARKK 126
SH R +KEEEN+R+++AFG+ DY AGE+FD E Q R++
Sbjct: 125 SHARQKRKEEENKRIKDAFGIATDYVAGESFDPEAQERRR 164 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig11.909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig11.909.1 >prot_F-serratus_M_contig11.909.1 ID=prot_F-serratus_M_contig11.909.1|Name=mRNA_F-serratus_M_contig11.909.1|organism=Fucus serratus male|type=polypeptide|length=139bp MDSHVRGMQKEEENRRMREAFGLGEDYAAGEAFDEETQARKKEARKMEREback to top mRNA from alignment at F-serratus_M_contig11:483088..487140+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig11.909.1 ID=mRNA_F-serratus_M_contig11.909.1|Name=mRNA_F-serratus_M_contig11.909.1|organism=Fucus serratus male|type=mRNA|length=4053bp|location=Sequence derived from alignment at F-serratus_M_contig11:483088..487140+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig11:483088..487140+ >mRNA_F-serratus_M_contig11.909.1 ID=mRNA_F-serratus_M_contig11.909.1|Name=mRNA_F-serratus_M_contig11.909.1|organism=Fucus serratus male|type=CDS|length=834bp|location=Sequence derived from alignment at F-serratus_M_contig11:483088..487140+ (Fucus serratus male)back to top |