mRNA_F-serratus_M_contig1099.904.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1099.904.1
Unique NamemRNA_F-serratus_M_contig1099.904.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1099.904.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 5.270e-90
Identity = 160/337 (47.48%), Postives = 212/337 (62.91%), Query Frame = 1
Query:    1 VSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSGVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEDISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAENYDALVEWALASIIARDGAAAAGLPTPEE----------------ALRQAHLPIREGGLGLTSSSSIKGAAYI 963
            V GGVEI+A TA L  ++G TILS+DG NA+NS+ R   LPA+A   P  V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPGA+ + ++DD+ V LPP  + ++ AI  VT W+Q+ L  + I L+  KS+ L  +G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D L+ WA++ I+    A   G+PT EE                A  Q HLPIREGGLG+TSS  I+ +A++
Sbjct:  234 VPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFV 570          
BLAST of mRNA_F-serratus_M_contig1099.904.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 1.060e-88
Identity = 156/337 (46.29%), Postives = 209/337 (62.02%), Query Frame = 1
Query:    1 VSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSGVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEDISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAENYDALVEWALASIIARDGAAAAGLPTPEE----------------ALRQAHLPIREGGLGLTSSSSIKGAAYI 963
            V GGVEI+A TA L  ++G TILS+DG NA+NS+ R   LPA+A   P    Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPGA+ + ++DD+ V LPP  + ++ AI  VT W+Q+ L  + I L+  KS  L  +G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+  L+ ++D Q S+Q+LR+S   RL HLLRT+ PSIT  AA  +D+L+ WA++ I+    A   G+PT EE                A  Q HLPIREGGLG+TSS  I+ +A++
Sbjct:   82 VPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFV 418          
BLAST of mRNA_F-serratus_M_contig1099.904.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 7.400e-86
Identity = 154/338 (45.56%), Postives = 214/338 (63.31%), Query Frame = 1
Query:    1 VSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSGVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEDISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAENYDALVEWALASIIARDGAAAAGLPTPEE-----------------ALRQAHLPIREGGLGLTSSSSIKGAAYI 963
            V GGVEI+A TA L  ++G TILS+DG NA+NS+ R   LPA+A   P  V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  + I L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA+ +D ++ WA++ I+    A +  +PT +E                 A  Q HLP+REGGLG+TS+  I+ +A++
Sbjct:  234 VPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFV 571          
BLAST of mRNA_F-serratus_M_contig1099.904.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 1.070e-84
Identity = 154/338 (45.56%), Postives = 215/338 (63.61%), Query Frame = 1
Query:    1 VSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSGVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEDISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAENYDALVEWALASIIARDGAAAAGLPTPEE-----------------ALRQAHLPIREGGLGLTSSSSIKGAAYI 963
            V GGVEI+A TA L  ++G TILS+DG NA+NS+ R   LPA+A + P  V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  + I L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA+ +D ++ WA++ I+    A +  +PT +E                 A  Q HLP+REGGLG+TS+  I+ +A++
Sbjct:   82 VPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFV 419          
BLAST of mRNA_F-serratus_M_contig1099.904.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 2.010e-84
Identity = 154/338 (45.56%), Postives = 214/338 (63.31%), Query Frame = 1
Query:    1 VSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSGVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEDISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAENYDALVEWALASIIARDGAAAAGLPTPEE-----------------ALRQAHLPIREGGLGLTSSSSIKGAAYI 963
            V GGVEI+A TA L  ++G TILS+DG NA+NS+ R   LPA+A   P  V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  + I L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA+ +D ++ WA++ I+    A +  +PT +E                 A  Q HLP+REGGLG+TS+  I+ +A++
Sbjct:  234 VPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFV 571          
BLAST of mRNA_F-serratus_M_contig1099.904.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 287 bits (734), Expect = 3.850e-84
Identity = 156/337 (46.29%), Postives = 217/337 (64.39%), Query Frame = 1
Query:    1 VSGGVEIMALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSGVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEDISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAENYDALVEWALASII---ARDGAAAAGLPTPEEA------------LRQAHLPIREGGLGLTSSSSIKGAAYIG 966
            V GG E++A  A L  ++G  +L+YD  NAFNS+ R   LPALA+++P  +PYA+N+YAREPPKLL+  D G   V+ SA GVQQGCNLGPLCYSAG LK+L++FRANPPV GA+ ++FIDD+ V+LP   + + AA   VT W+Q  +    ++LNR KS+ L   G   +   E+ R  ++ T L V   GMR+VGVPVG   + +    +   GEP +L++ +A ++DAQAS QILR SA +RL+ LLR++PP +T +AA  +D  VE  L +I+   ++ G  A   PT E +            +RQA LP+REGGLG+ S+  I G A+IG
Sbjct: 1270 VPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNGPSQPGEHAPHEPTEENSPSLPRLNLSPVGIRQARLPVREGGLGIPSTVDISGPAFIG 1605          
BLAST of mRNA_F-serratus_M_contig1099.904.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 4.750e-68
Identity = 122/269 (45.35%), Postives = 166/269 (61.71%), Query Frame = 1
Query:  205 LDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEDISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAENYDALVEWALASIIARDGAAAAGLPTPEE----------------ALRQAHLPIREGGLGLTSSSSIKGAAYI 963
            ++ G  E+V S RGVQQGCNLG   +S G L  +KEF   PPVPGA+ + ++DD+ V LPP  + ++ AI  VT W+Q+ L  + I L+  KS+ L  +G     LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D L+ WA++ I+    A   G+PT EE                A  Q HLPIREGGLG+TSS  I+ +A++
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAFV 269          
BLAST of mRNA_F-serratus_M_contig1099.904.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 4.420e-53
Identity = 98/237 (41.35%), Postives = 147/237 (62.03%), Query Frame = 1
Query:  304 LKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEDISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAENYDALVEWALASIIARDGAAAAGLPTPEE-----------------ALRQAHLPIREGGLGLTSSSSIKGAAYI 963
            +KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  + I L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+P GTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA+ +D ++ WA++ I+    A +  +PT +E                 A  Q HLP+REGGLG+TS+  I+ +A++
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFV 237          
BLAST of mRNA_F-serratus_M_contig1099.904.1 vs. uniprot
Match: A0A6H5JL76_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL76_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 1.160e-52
Identity = 103/236 (43.64%), Postives = 143/236 (60.59%), Query Frame = 1
Query:  304 LKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEDISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAENYDALVEWALASIIARDGAAAAGLPTPEE----------------ALRQAHLPIREGGLGLTSSSSIKGAAYI 963
            +KEF   PPVPGA+ + ++DD+ V LPP  + ++ AI  VT W+Q+ L  + I L+  KS+ L  +G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT  PSIT  AA  +D L+ WA++ I+    A   G+PT EE                A  Q HLPIREGGL +T S  I+ +A++
Sbjct:    1 MKEFNDKPPVPGAKLIRYVDDLHVHLPPGLARNIQAIATVTNWIQDHLLRKVIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTTAPSITSTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLRITCSVLIRESAFV 236          
BLAST of mRNA_F-serratus_M_contig1099.904.1 vs. uniprot
Match: A0A6H5KKJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ7_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 1.260e-48
Identity = 98/237 (41.35%), Postives = 147/237 (62.03%), Query Frame = 1
Query:  304 LKEFRANPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEDISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAENYDALVEWALASIIARDGAAAAGLPTPEE-----------------ALRQAHLPIREGGLGLTSSSSIKGAAYI 963
            +KEF   PPVPG + + ++DD+   LPP  + ++ AI  VT W+QERL  + I L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL  LLRT+ PSIT  AA+ +D ++ WA++ I+    A +  +PT +E                 A  Q HLP+REGGLG+TS+  I+ +A++
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFQLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAFV 237          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1099.904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGJ4_9PHAE5.270e-9047.48Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE1.060e-8846.29Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JCM0_9PHAE7.400e-8645.56Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE1.070e-8445.56Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LN63_9PHAE2.010e-8445.56Reverse transcriptase domain-containing protein n=... [more]
A0A6P0N5L4_9CYAN3.850e-8446.29Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5K541_9PHAE4.750e-6845.35Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLD7_9PHAE4.420e-5341.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL76_9PHAE1.160e-5243.64Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKJ7_9PHAE1.260e-4841.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1099contigF-serratus_M_contig1099:252681..253697 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score80.1
Seed ortholog evalue2e-12
Seed eggNOG ortholog296587.XP_002506989.1
Hectar predicted targeting categoryother localisation
EggNOG OGs2E24P@1,2S9D9@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size966
Cds size945
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1099.904.1prot_F-serratus_M_contig1099.904.1Fucus serratus malepolypeptideF-serratus_M_contig1099 252681..253676 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928959.359739-CDS-F-serratus_M_contig1099:252680..2527671622928959.359739-CDS-F-serratus_M_contig1099:252680..252767Fucus serratus maleCDSF-serratus_M_contig1099 252681..252767 -
1690962646.5700378-CDS-F-serratus_M_contig1099:252680..2527671690962646.5700378-CDS-F-serratus_M_contig1099:252680..252767Fucus serratus maleCDSF-serratus_M_contig1099 252681..252767 -
1622928959.380116-CDS-F-serratus_M_contig1099:252818..2536761622928959.380116-CDS-F-serratus_M_contig1099:252818..253676Fucus serratus maleCDSF-serratus_M_contig1099 252819..253676 -
1690962646.58237-CDS-F-serratus_M_contig1099:252818..2536761690962646.58237-CDS-F-serratus_M_contig1099:252818..253676Fucus serratus maleCDSF-serratus_M_contig1099 252819..253676 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928959.3958182-UTR-F-serratus_M_contig1099:253676..2536971622928959.3958182-UTR-F-serratus_M_contig1099:253676..253697Fucus serratus maleUTRF-serratus_M_contig1099 253677..253697 -
1690962646.5922992-UTR-F-serratus_M_contig1099:253676..2536971690962646.5922992-UTR-F-serratus_M_contig1099:253676..253697Fucus serratus maleUTRF-serratus_M_contig1099 253677..253697 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1099.904.1

>prot_F-serratus_M_contig1099.904.1 ID=prot_F-serratus_M_contig1099.904.1|Name=mRNA_F-serratus_M_contig1099.904.1|organism=Fucus serratus male|type=polypeptide|length=315bp
MALTATLGFEEGCTILSYDGANAFNSIYRHRFLPALAEIVPSGVPYASNL
YAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRA
NPPVPGARAVSFIDDITVILPPERSLDVAAIGKVTEWLQERLGIEDISLN
RRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQ
RDFLKEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPS
ITGQAAENYDALVEWALASIIARDGAAAAGLPTPEEALRQAHLPIREGGL
GLTSSSSIKGAAYIG
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mRNA from alignment at F-serratus_M_contig1099:252681..253697-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1099.904.1 ID=mRNA_F-serratus_M_contig1099.904.1|Name=mRNA_F-serratus_M_contig1099.904.1|organism=Fucus serratus male|type=mRNA|length=1017bp|location=Sequence derived from alignment at F-serratus_M_contig1099:252681..253697- (Fucus serratus male)
GTTTCAGGCGGAGTAGAGATAATGGCGCTCACTGCAACACTGGGTTTCGA AGAGGGTTGTACCATTCTCTCATACGACGGAGCAAACGCCTTCAACAGTA TATACCGCCACAGGTTCCTGCCCGCGCTAGCGGAAATCGTCCCCTCAGGG GTCCCCTACGCATCAAACCTGTACGCACGGGAACCCCCAAAACTCCTGTT TGCACTAGACGGTGGAGGTTCGGAGGTGGTCGAGTCAGCACGGGGAGTAC AGCAAGGATGTAATCTAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAG ATCCTAAAAGAATTCAGGGCCAACCCACCGGTGCCAGGAGCGAGAGCGGT TTCGTTCATCGACGATATCACGGTCATTCTACCACCTGAACGTTCTCTCG ATGTGGCAGCTATAGGGAAAGTTACGGAATGGCTACAGGAGCGCCTGGGG ATAGAAGATATCTCGCTGAACCGAAGGAAATCGCAGGCCCTGCTGGCAGA TGGAGTGGGGCCAGAACAACTGACGGAAGAGCAGCGAGTGGCAATGGATA CCACAGGGCTCACGGTGGTCCGACAGGGAATGAGGGTTGTGGGAGTACCA GTTGGAACAGAACAGTTCCAGCGTGATTTCTTAAAGGAGGCGGTTAATGG AGAGCCAGCTGAGCTCGTGAGGGCGCTGGCCCCAATGGAGGATGCCCAAG CGAGCTTTCAGATTTTGCGTCTATCCGCCACTTCTCGCCTCTCACATCTG CTCCGAACAGTCCCGCCCTCCATCACAGGCCAAGCTGCAGAAAATTATGA CGCTTTGGTGGAGTGGGCGCTGGCGTCTATCATAGCCCGTGACGGAGCTG CCGCGGCAGGGCTACCAACGCCAGAGGAAGTAGCCCACGATCCCACTGTG TGCCGAAATCAGACATACCTGGGGCACGAGGCCCTACGACAGGCCCACCT ACCAATCCGAGAAGGCGGCCTTGGGCTTACCAGCAGTAGCTCCATCAAAG GCGCGGCATATATCGGT
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Coding sequence (CDS) from alignment at F-serratus_M_contig1099:252681..253697-

>mRNA_F-serratus_M_contig1099.904.1 ID=mRNA_F-serratus_M_contig1099.904.1|Name=mRNA_F-serratus_M_contig1099.904.1|organism=Fucus serratus male|type=CDS|length=1890bp|location=Sequence derived from alignment at F-serratus_M_contig1099:252681..253697- (Fucus serratus male)
ATGGCGCTCACTGCAACACTGGGTTTCGAAGAGGGTTGTACCATTCTCTC
ATACGACGGAGCAAACGCCTTCAACAGTATATACCGCCACAGGTTCCTGC
CCGCGCTAGCGGAAATCGTCCCCTCAGGGGTCCCCTACGCATCAAACCTG
TACGCACGGGAACCCCCAAAACTCCTGTTTGCACTAGACGGTGGAGGTTC
GGAGGTGGTCGAGTCAGCACGGGGAGTACAGCAAGGATGTAATCTAGGTC
CACTTTGCTACAGCGCAGGCTCACTGAAGATCCTAAAAGAATTCAGGGCC
AACCCACCGGTGCCAGGAGCGAGAGCGGTTTCGTTCATCGACGATATCAC
GGTCATTCTACCACCTGAACGTTCTCTCGATGTGGCAGCTATAGGGAAAG
TTACGGAATGGCTACAGGAGCGCCTGGGGATAGAAGATATCTCGCTGAAC
CGAAGGAAATCGCAGGCCCTGCTGGCAGATGGAGTGGGGCCAGAACAACT
GACGGAAGAGCAGCGAGTGGCAATGGATACCACAGGGCTCACGGTGGTCC
GACAGGGAATGAGGGTTGTGGGAGTACCAGTTGGAACAGAACAGTTCCAG
CGTGATTTCTTAAAGGAGGCGGTTAATGGAGAGCCAGCTGAGCTCGTGAG
GGCGCTGGCCCCAATGGAGGATGCCCAAGCGAGCTTTCAGATTTTGCGTC
TATCCGCCACTTCTCGCCTCTCACATCTGCTCCGAACAGTCCCGCCCTCC
ATCACAGGCCAAGCTGCAGAAAATTATGACGCTTTGGTGGAGTGGGCGCT
GGCGTCTATCATAGCCCGTGACGGAGCTGCCGCGGCAGGGCTACCAACGC
CAGAGGAAATGGCGCTCACTGCAACACTGGGTTTCGAAGAGGGTTGTACC
ATTCTCTCATACGACGGAGCAAACGCCTTCAACAGTATATACCGCCACAG
GTTCCTGCCCGCGCTAGCGGAAATCGTCCCCTCAGGGGTCCCCTACGCAT
CAAACCTGTACGCACGGGAACCCCCAAAACTCCTGTTTGCACTAGACGGT
GGAGGTTCGGAGGTGGTCGAGTCAGCACGGGGAGTACAGCAAGGATGTAA
TCTAGGTCCACTTTGCTACAGCGCAGGCTCACTGAAGATCCTAAAAGAAT
TCAGGGCCAACCCACCGGTGCCAGGAGCGAGAGCGGTTTCGTTCATCGAC
GATATCACGGTCATTCTACCACCTGAACGTTCTCTCGATGTGGCAGCTAT
AGGGAAAGTTACGGAATGGCTACAGGAGCGCCTGGGGATAGAAGATATCT
CGCTGAACCGAAGGAAATCGCAGGCCCTGCTGGCAGATGGAGTGGGGCCA
GAACAACTGACGGAAGAGCAGCGAGTGGCAATGGATACCACAGGGCTCAC
GGTGGTCCGACAGGGAATGAGGGTTGTGGGAGTACCAGTTGGAACAGAAC
AGTTCCAGCGTGATTTCTTAAAGGAGGCGGTTAATGGAGAGCCAGCTGAG
CTCGTGAGGGCGCTGGCCCCAATGGAGGATGCCCAAGCGAGCTTTCAGAT
TTTGCGTCTATCCGCCACTTCTCGCCTCTCACATCTGCTCCGAACAGTCC
CGCCCTCCATCACAGGCCAAGCTGCAGAAAATTATGACGCTTTGGTGGAG
TGGGCGCTGGCGTCTATCATAGCCCGTGACGGAGCTGCCGCGGCAGGGCT
ACCAACGCCAGAGGAAGCCCTACGACAGGCCCACCTACCAATCCGAGAAG
GCGGCCTTGGGCTTACCAGCAGTAGCTCCATCAAAGGCGCGGCATATATC
GGTGCCCTACGACAGGCCCACCTACCAATCCGAGAAGGCGGCCTTGGGCT
TACCAGCAGTAGCTCCATCAAAGGCGCGGCATATATCGGT
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