mRNA_F-serratus_M_contig1098.888.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1098.888.1 vs. uniprot
Match: D7FZG1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG1_ECTSI) HSP 1 Score: 107 bits (268), Expect = 2.870e-29 Identity = 54/71 (76.06%), Postives = 59/71 (83.10%), Query Frame = 1
Query: 1 MRQATTFWRLAGMTYLEYASKATTVVRGALKEPARTQALARDVVSYNRAVFENGKPLPKSPITSLKEASAT 213
M QATTFWRLAGMTYLEYASKATTV+RGALKEPAR+ ALAR+ V YNR VF G+P K P+ SLKEA AT
Sbjct: 1 MSQATTFWRLAGMTYLEYASKATTVMRGALKEPARSTALAREAVGYNRNVFVGGQPQGKLPVASLKEAGAT 71
BLAST of mRNA_F-serratus_M_contig1098.888.1 vs. uniprot
Match: A0A835YQS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS1_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.720e-18 Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 1
Query: 4 RQATTFWRLAGMTYLEYASKATTVVRGALKEPARTQALARDVVSYNRAVFENGKPLPKSPITSLKEA 204
+ ATTFWR+AG++YLEYA+ TT +R LKEP R++A+ R+ VSYNRAVF++G K P+ SL +A
Sbjct: 4 KAATTFWRIAGLSYLEYAAATTTALRMGLKEPMRSKAMTRNAVSYNRAVFKDGVSGAKKPVKSLADA 70
BLAST of mRNA_F-serratus_M_contig1098.888.1 vs. uniprot
Match: A0A1Z5K8B7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8B7_FISSO) HSP 1 Score: 75.9 bits (185), Expect = 1.260e-16 Identity = 33/64 (51.56%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 13 TTFWRLAGMTYLEYASKATTVVRGALKEPARTQALARDVVSYNRAVFENGKPLPKSPITSLKEA 204
TTFWR+AGM+YL+Y +KA +R LKEPA+T+A+A++ YN AV+E GK PK P+ ++++A
Sbjct: 7 TTFWRVAGMSYLQYINKAAGTMRSVLKEPAKTRAMAQEAYGYNAAVWEAGKQGPKLPVANIQQA 70
BLAST of mRNA_F-serratus_M_contig1098.888.1 vs. uniprot
Match: B7G8W9_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8W9_PHATC) HSP 1 Score: 73.9 bits (180), Expect = 3.200e-15 Identity = 32/67 (47.76%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 13 TTFWRLAGMTYLEYASKATTVVRGALKEPARTQALARDVVSYNRAVFENGKPLPKSPITSLKEASAT 213
TTFWR+AGM+YL+Y +KA T +RGALKEPA+ +A+ ++ +Y + +++GK PK P+ L ++ AT
Sbjct: 63 TTFWRMAGMSYLQYVNKAATSMRGALKEPAQRKAMEQEAFAYKVSTWQDGKQSPKVPVDVLAQSGAT 129
BLAST of mRNA_F-serratus_M_contig1098.888.1 vs. uniprot
Match: A0A7S3L8J2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L8J2_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 5.910e-12 Identity = 26/64 (40.62%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 4 RQATTFWRLAGMTYLEYASKATTVVRGALKEPARTQALARDVVSYNRAVFENGKPLPKSPITSL 195
+ TTFWR+AG++YL+Y +KA + +RGALKEPA+++ +D S+ ++ + G PK+ +T +
Sbjct: 47 KPVTTFWRMAGLSYLQYVNKAASTIRGALKEPAKSRLAVQDTFSFKKSSWSGGVQGPKTEVTRM 110
BLAST of mRNA_F-serratus_M_contig1098.888.1 vs. uniprot
Match: A0A0J8CI46_BETVV (Uncharacterized protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8CI46_BETVV) HSP 1 Score: 62.0 bits (149), Expect = 3.600e-11 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 10 ATTFWRLAGMTYLEYASKATTVVRGALKEPARTQALARDVVSYNRAVFENGKPLPKSPITSLKEASA 210
A FWR AGMTY+ Y++ +VR LKEP +++ALAR+ V Y+ + FENGKP + P +A A
Sbjct: 6 AVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEALAREKVHYSISKFENGKP--QKPTIRSDDAQA 70
BLAST of mRNA_F-serratus_M_contig1098.888.1 vs. uniprot
Match: A0A448YV42_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV42_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 3.690e-11 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 10 ATTFWRLAGMTYLEYASKATTVVRGALKEPARTQALARDVVSYNRAVFENGKPLPKSPITSLKEA 204
+TT+WR+AGMTYL+Y ++A VR LKEP +++ LA+ YN + +E+G K I++L +A
Sbjct: 5 STTYWRIAGMTYLQYVNRAAGAVRSGLKEPTKSKLLAQSEFKYNASAWESGIQGAKKEISALGQA 69
BLAST of mRNA_F-serratus_M_contig1098.888.1 vs. uniprot
Match: A0A1E7ER17_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER17_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 3.690e-11 Identity = 29/65 (44.62%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 10 ATTFWRLAGMTYLEYASKATTVVRGALKEPARTQALARDVVSYNRAVFENGKPLPKSPITSLKEA 204
AT FWR+AGM+YL+Y ++A VR ALKEP +++ A+ SY + + +G + K+ ITSL +A
Sbjct: 5 ATNFWRIAGMSYLQYVNRAAGSVRSALKEPMKSKLSAQGEFSYKASAWVDGTQMSKTEITSLSQA 69
BLAST of mRNA_F-serratus_M_contig1098.888.1 vs. uniprot
Match: W7U8A3_9STRA (Atp synthase subunit epsilon n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8A3_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 5.370e-11 Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 10 ATTFWRLAGMTYLEYASKATTVVRGALKEPARTQALARDVVSYNRAVFEN---GKPLP--KSPITSLK 198
ATT+WR+AG+TYL+Y SKA V+R ALKEP RT+ +A++ + + R + G+P+ K +TSLK
Sbjct: 5 ATTYWRIAGLTYLQYTSKAAGVLRAALKEPLRTKTMAKEKIFFKRLEWSPKMIGQPVGPLKVEVTSLK 72
BLAST of mRNA_F-serratus_M_contig1098.888.1 vs. uniprot
Match: A0A0K9RSM6_SPIOL (Uncharacterized protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RSM6_SPIOL) HSP 1 Score: 60.8 bits (146), Expect = 1.010e-10 Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 10 ATTFWRLAGMTYLEYASKATTVVRGALKEPARTQALARDVVSYNRAVFENGKPL 171
A FWR AGMTY+ Y++ +VR LKEP +++A+AR+ V Y+ A FENGK L
Sbjct: 6 AVPFWRAAGMTYISYSNICANLVRNCLKEPFKSEAIAREKVHYSLAKFENGKSL 59 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1098.888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1098.888.1 >prot_F-serratus_M_contig1098.888.1 ID=prot_F-serratus_M_contig1098.888.1|Name=mRNA_F-serratus_M_contig1098.888.1|organism=Fucus serratus male|type=polypeptide|length=73bp MRQATTFWRLAGMTYLEYASKATTVVRGALKEPARTQALARDVVSYNRAVback to top mRNA from alignment at F-serratus_M_contig1098:13724..17380+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1098.888.1 ID=mRNA_F-serratus_M_contig1098.888.1|Name=mRNA_F-serratus_M_contig1098.888.1|organism=Fucus serratus male|type=mRNA|length=3657bp|location=Sequence derived from alignment at F-serratus_M_contig1098:13724..17380+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1098:13724..17380+ >mRNA_F-serratus_M_contig1098.888.1 ID=mRNA_F-serratus_M_contig1098.888.1|Name=mRNA_F-serratus_M_contig1098.888.1|organism=Fucus serratus male|type=CDS|length=438bp|location=Sequence derived from alignment at F-serratus_M_contig1098:13724..17380+ (Fucus serratus male)back to top |