mRNA_F-serratus_M_contig1093.860.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1093.860.1 vs. uniprot
Match: D7FZH2_ECTSI (Mago-bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZH2_ECTSI) HSP 1 Score: 205 bits (522), Expect = 4.750e-64 Identity = 139/203 (68.47%), Postives = 163/203 (80.30%), Query Frame = 1 Query: 1 MASPVPIGAVVKENGDVVIPATRRPDGTWRKERRLRAGYVPQDEVQAYESKGTQHQKYMANRLPPGMAPDSAEE-GKPLTAAQKKNQARAAXXXXXXXXXXXXXXASDGGVAAREVDVGEAAAALENVKVSGGGGGSEAGPGEE-GSGSADAAKKVKALNKKIRQVEELEAKVAAGEVAPSQEQRQKLARKPALLAELAEVKS 603 MAS VPIGAV KENGDVV+PAT+RPDGTWRKERR++ GY+PQDEV +E++GTQ+QKY+ NRLPPGMAP+SA E KPLTAAQKKNQAR XXXXXXXXXXXXXX V AA AL +KVS GGGG+ GE+ S D+A+K+KALNKKIRQVEELEAKV +GEV P++EQRQKLARKPAL+AELAE+++ Sbjct: 1 MASAVPIGAVAKENGDVVLPATQRPDGTWRKERRIKKGYIPQDEVAKFETRGTQNQKYLKNRLPPGMAPESASEPNKPLTAAQKKNQARXXXXXXXXXXXXXXXXXXXXXXXXXXDGVETAAKALGGLKVSAGGGGAS---GEQTASEPLDSARKIKALNKKIRQVEELEAKVTSGEVVPTEEQRQKLARKPALVAELAELQA 200
BLAST of mRNA_F-serratus_M_contig1093.860.1 vs. uniprot
Match: A0A6P4Y4X9_BRABE (partner of Y14 and mago-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Y4X9_BRABE) HSP 1 Score: 107 bits (266), Expect = 1.760e-25 Identity = 87/186 (46.77%), Postives = 114/186 (61.29%), Query Frame = 1 Query: 43 GDVVIPATRRPDGTWRKERRLRAGYVPQDEVQAYESKGTQHQKYMANRLPPGMAPDSAEEGKPLTAAQKKNQARAAXXXXXXXXXXXXXXASDGGVAAREVDVGEAAAALENVKVSGGGGGSEAGPGEEGSGSADAAKKVKALNKKIRQVEELEAKVAAGEVA-PSQEQRQKLARKPALLAELAEV 597 G+ IPA++RPDGTWRK RR++ GYVPQ+EV YESKGTQ K LPPG PD E+ KP + K A XXXXXXXXXXX SDGGV G +E V +S ++ G+ +A+ AKK+K L KK+RQ+EEL+AK+ +GE+A P + Q K+ RK +L E+ E+ Sbjct: 16 GEKFIPASQRPDGTWRKARRVKQGYVPQEEVPVYESKGTQWMKSKPT-LPPGFHPDPEEQEKPTSEEDKYAGMSKAAKKXXXXXXXXXXXXSDGGV-------GPITQGVEQVNLSNQSQQAKINNGQSQDSTAEPAKKLKNLKKKLRQIEELQAKIESGEIAKPDKTQLDKIERKSDILKEIREL 193
BLAST of mRNA_F-serratus_M_contig1093.860.1 vs. uniprot
Match: UPI001BB237CF (partner of Y14 and mago-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB237CF) HSP 1 Score: 101 bits (252), Expect = 2.570e-23 Identity = 90/201 (44.78%), Postives = 114/201 (56.72%), Query Frame = 1 Query: 1 MASPVPIGAVVKENGDVVIPATRRPDGTWRKERRLRAGYVPQDEVQAYESKGTQHQKYMANRLPPGM----APDSAEEGKPLTAAQKKNQARAAXXXXXXXXXXXXXXASDGGVAAREVDVGEAAAALENVKVSGGGGGSEAGPGEEGSGSADAAKKVKALNKKIRQVEELEAKVAAGEVA-PSQEQRQKLARKPALLAEL 588 MAS E+G +PAT+RPDGTWRK RR++ GY+PQ+EV YESKG Q RLPPG+ AP EE K LT A K XXXXXX + DV + ++ V V GGG+++ P + D K++K L KKIRQ+EELEAK+A+GEVA PS+EQ +K+ARK AL EL Sbjct: 20 MASAAKENVETDESGQY-LPATQRPDGTWRKPRRVKPGYIPQEEVPLYESKGKQWMNSKP-RLPPGVYEDPAPAKVEESKALTKAAKXXXXXXXXXXXXXNEVGQV----------QNGDVEQLRKGVQEVSV---GGGADSAPVVQ-----DPQKRIKNLKKKIRQIEELEAKIASGEVAQPSKEQLEKIARKEALEDEL 200
BLAST of mRNA_F-serratus_M_contig1093.860.1 vs. uniprot
Match: A0A7M7RH58_STRPU (Mago-bind domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7RH58_STRPU) HSP 1 Score: 100 bits (249), Expect = 5.100e-23 Identity = 90/188 (47.87%), Postives = 114/188 (60.64%), Query Frame = 1 Query: 55 IPATRRPDGTWRKERRLRAGYVPQDEVQAYESKGTQHQKYMANRLPPGMAPDSA------EEGKP-LTAAQKKNQARAAXXXXXXXXXXXXXXASDGGVAAR--EVDVGEAAAALENVKVSGGGGGSEAGPGEEGSGSADAAKKVKALNKKIRQVEELEAKVAAGEVA-PSQEQRQKLARKPALLAEL 588 +PAT+RPDGTWRK RR+R GYVPQ+EV YESKG Q RLPPG+ D A EE K L+ A KKN+ XXXXXX D G +A+ DV + ++ V VSGG +E+ P + D K++K L KKIRQ+EELEAK+A+GEVA PS+EQ +K++RK A EL Sbjct: 18 LPATQRPDGTWRKPRRVRPGYVPQEEVPLYESKGKQWVSSKP-RLPPGVYEDPAPAKVHVEESKQQLSKASKKNEXXXXXXXXXX----------DEGESAQVQNGDVEQLRKGVQEVSVSGG---AESAPAVQ-----DPQKRIKNLKKKIRQIEELEAKIASGEVAQPSKEQLEKISRKDAFEEEL 186
BLAST of mRNA_F-serratus_M_contig1093.860.1 vs. uniprot
Match: UPI001F03A280 (partner of Y14 and mago-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03A280) HSP 1 Score: 93.6 bits (231), Expect = 2.530e-20 Identity = 86/188 (45.74%), Postives = 104/188 (55.32%), Query Frame = 1 Query: 55 IPATRRPDGTWRKERRLRAGYVPQDEVQAYESKGTQHQKYMANRLPPGMAPDSAEEGKP---LTAAQKKNQARAAXXXXXXXXXXXXXXASDGGVAAREVDVGEAAAALENVKVSGGGGGSEAGPGEEGSGSAD---AAKKVKALNKKIRQVEELEAKVAAGEVAP-SQEQRQKLARKPALLAELAEV 597 IPATRRPDGTWRK +++ GYVP DEV+ YESKGTQ +K N++ P + EE KP LT QKKN+ XXX S+ G V E N K G G SE +AD AKKVK L KK+RQ+ ELEAK +GEV + EQ++KLARK ALL EL E+ Sbjct: 18 IPATRRPDGTWRKPIKVKTGYVPPDEVEKYESKGTQWKK---NQIQ--CTPGAEEESKPVHKLTKNQKKNERXXXXXXEASSENAKTDAVSEIGERLLSTTVDE----CPNTKQENGEGVSE---------TADKNIVAKKVKNLKKKLRQIHELEAKKNSGEVNELTIEQKEKLARKDALLKELEEL 187
BLAST of mRNA_F-serratus_M_contig1093.860.1 vs. uniprot
Match: A0A8C4AAD5_9TELE (PYM homolog 1, exon junction complex associated factor n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4AAD5_9TELE) HSP 1 Score: 91.7 bits (226), Expect = 9.510e-20 Identity = 76/194 (39.18%), Postives = 101/194 (52.06%), Query Frame = 1 Query: 25 AVVKENGDVVIPATRRPDGTWRKERRLRAGYVPQDEVQAYESKGTQHQKYMANRLPPGMAPDSAEEGKPLTAAQKKNQARAAXXXXXXXXXXXXXXASDGGVAAREVDVGEAAAALENVKVSGGGGGSEAGPGEEGSGSADAAKKVKALNKKIRQVEELEAKVAAGEVA-PSQEQRQKLARKPALLAELAEVKS 603 A V + I AT+RPDGTWRK RR++ GYVPQ+EV YE+K + K + LPPGM+P+ A + +P A Q A G D+ AAL + + GE+ + + AKKVK L KK+RQVEEL+ KV AGE+ PSQEQR KL R AL EL ++++ Sbjct: 4 AYVTDESGKYIAATQRPDGTWRKPRRVKEGYVPQEEVPVYENKYVKFFKSKPD-LPPGMSPEDAAK-QPAAAGQGDADAGGLSKSARRNMKRREKRKQQG-----PTDM----AALRDAAC-------QLSIGEDAAAGGEKAKKVKGLKKKLRQVEELQQKVDAGEIQNPSQEQRDKLGRAAALRLELQQLEA 179
BLAST of mRNA_F-serratus_M_contig1093.860.1 vs. uniprot
Match: A0A151LZE7_ALLMI (Partner of Y14 and mago n=2 Tax=Alligator TaxID=8495 RepID=A0A151LZE7_ALLMI) HSP 1 Score: 92.0 bits (227), Expect = 1.340e-19 Identity = 78/197 (39.59%), Postives = 110/197 (55.84%), Query Frame = 1 Query: 55 IPATRRPDGTWRKERRLRAGYVPQDEVQAYESKGTQHQKYMANR--LPPGMAPDS-AEEGKPLTAAQKKNQARAAXXXXXXXXXXXXXXASDGGVAAREVDVGEAAAALENVKVSGGGGGSEA---------------GPGEEGSGSADAAKKVKALNKKIRQVEELEAKVAAGEVA-PSQEQRQKLARKPALLAEL 588 I +T+RPDGTWRK+RR++ GYVPQ+EV YE+K + K+ ++ LPPG++P++ A+ G+P A+ + XXXX + G E D E LE +SGGG G G GE + A+ KK+K L KK+RQVEEL+ +V +GE+ PS+EQ +KLAR+ AL EL Sbjct: 14 IASTQRPDGTWRKQRRVKEGYVPQEEVPVYENK---YVKFFKSKPELPPGLSPEANAQPGRPAPRAESGEVGLSKTAKRNLKRKEXXXXQQEKG----EKDTDELIQVLEKTTLSGGGAGDRGLPAPPQPLACGAKAPGDGEALAAVAEKTKKIKNLRKKLRQVEELQQRVDSGEIKQPSREQLEKLARRKALEEEL 203
BLAST of mRNA_F-serratus_M_contig1093.860.1 vs. uniprot
Match: A0A8B8C127_CRAVI (partner of Y14 and mago-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8C127_CRAVI) HSP 1 Score: 91.3 bits (225), Expect = 2.070e-19 Identity = 82/194 (42.27%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 34 KENGDVVIPATRRPDGTWRKERRLRAGYVPQDEVQAYESKGTQHQKYMANRLPPGMAPDSAE-----EGKPLTAAQKKNQARAAXXXXXXXXXXXXXXASDGGVAAREVDVGEAAAAL---ENVKVSGGGGGSEAGPGEEGSGSADAAKKVKALNKKIRQVEELEAKVAAGEVA-PSQEQRQKLARKPALLAEL 588 ++ G++ +PATRRPDGTWRK R+++ GYVPQ+EV YE+KG Q K LPPG+ P+ E EG+ ++ A KKN A XXXXXXXXXX + GV EV++ + AA EN + ++ S A KK++ L KK++QV++L+AKV +GE+A P +EQ K+AR+ L+ E+ Sbjct: 14 EKTGELYLPATRRPDGTWRKPRKVKDGYVPQEEVPLYENKGVQWLKNKPT-LPPGLNPEEVETSKSTEGQAMSKAAKKN---AKXXXXXXXXXXSGSGVAGSGVT--EVNLSQTLAATKLSENTQKE-----------DQSSDRAAIEKKIRNLKKKLKQVDDLKAKVDSGELANPEKEQLAKIARRHELVEEI 190
BLAST of mRNA_F-serratus_M_contig1093.860.1 vs. uniprot
Match: UPI00106C0BB4 (partner of Y14 and mago-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C0BB4) HSP 1 Score: 90.9 bits (224), Expect = 2.970e-19 Identity = 82/182 (45.05%), Postives = 103/182 (56.59%), Query Frame = 1 Query: 55 IPATRRPDGTWRKERRLRAGYVPQDEVQAYESKGTQHQKYMANRLPPGMAPDSAEEGKPLTAAQKKNQARAAXXXXXXXXXXXXXXASDGGVAAREVDVGEAAAALENVKVSGGGGGSEAGPGEEGSGSADAAKKVKALNKKIRQVEELEAKVAAGEVAP-SQEQRQKLARKPALLAELAEV 597 IPAT+RPDGTWRK RR++ GY+P DEV+ YESKGT+ K N +PPG + DSA + L+ QKK XXXXXXXXXX + + E A LE S AAKK K L KK+RQ++EL+AKV +GE+ + EQ +KLARK AL EL E+ Sbjct: 36 IPATKRPDGTWRKARRVKEGYIPPDEVEKYESKGTKWTKNQCN-VPPGASVDSAIPPQKLSKNQKKXXXXXXXXXXXXXXXXNSSAVEEVTTELSIASITETNADLE---------------------SEAAAKKAKNLKKKLRQIDELQAKVNSGEMKDITAEQNEKLARKEALEQELEEL 195
BLAST of mRNA_F-serratus_M_contig1093.860.1 vs. uniprot
Match: A0A2G8KMX9_STIJA (Putative partner of Y14 and mago n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KMX9_STIJA) HSP 1 Score: 89.0 bits (219), Expect = 8.920e-19 Identity = 77/185 (41.62%), Postives = 116/185 (62.70%), Query Frame = 1 Query: 55 IPATRRPDGTWRKERRLRAGYVPQDEVQAYESKGTQHQKYMANR--LPPGMAPDSAEEGKPLTAAQKKNQARAAXXXXXXXXXXXXXXASDGGVAAREVDVGEAAAALENVKVSGGGGGSEAGPGEEGSGSADAAKKVKALNKKIRQVEELEAKVAAGEVAPSQEQRQKLARKPALLAELAEVKS 603 IPAT+RPDG+WRKERR++AGY+PQDEV YESKG Q +M ++ LPPG+ D+ ++ K + K XXXXXXXXXXX ++ G +V + ++ ++ ++ EG+ ++ K++K + KK++Q+ EL+AKV +GEV P+QEQ+ KLARK A EL E+++ Sbjct: 6 IPATQRPDGSWRKERRVKAGYIPQDEVPIYESKGKQ---WMNSKPALPPGVHLDTKQKEKQASQNISKAXXXXXXXXXXXXXXXXTEDSTSG-------NVDDLSSQMQEADIN-----------SEGT-TSSLQKRLKNVRKKLKQIAELQAKVDSGEVIPAQEQKDKLARKAAFEEELRELEA 168 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1093.860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1093.860.1 >prot_F-serratus_M_contig1093.860.1 ID=prot_F-serratus_M_contig1093.860.1|Name=mRNA_F-serratus_M_contig1093.860.1|organism=Fucus serratus male|type=polypeptide|length=201bp MASPVPIGAVVKENGDVVIPATRRPDGTWRKERRLRAGYVPQDEVQAYESback to top mRNA from alignment at F-serratus_M_contig1093:83909..88607- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1093.860.1 ID=mRNA_F-serratus_M_contig1093.860.1|Name=mRNA_F-serratus_M_contig1093.860.1|organism=Fucus serratus male|type=mRNA|length=4699bp|location=Sequence derived from alignment at F-serratus_M_contig1093:83909..88607- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1093:83909..88607- >mRNA_F-serratus_M_contig1093.860.1 ID=mRNA_F-serratus_M_contig1093.860.1|Name=mRNA_F-serratus_M_contig1093.860.1|organism=Fucus serratus male|type=CDS|length=1206bp|location=Sequence derived from alignment at F-serratus_M_contig1093:83909..88607- (Fucus serratus male)back to top |