mRNA_F-serratus_M_contig1088.810.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1088.810.1 vs. uniprot
Match: A0A6H5KTB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB0_9PHAE) HSP 1 Score: 387 bits (995), Expect = 1.300e-110 Identity = 312/738 (42.28%), Postives = 370/738 (50.14%), Query Frame = 1 Query: 1348 KPNGLRRGKWTTEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQTSDIERSRSELADLERRFLERVAMTNRCKTSGEIGAKEGGRESDAMRPHHPPVVTQPWMLPPSXXXXXXXHT----------STMGQQIPAATPGVTLMNPAINRTFLSSPLASNGCQAPGLSSTARSMAVKQTPPTTAATEVSSAPAVASTATSAVNVPLAGSSTPKVAMNSNATGSAAAVEVHRQTPVGSHQQPKTEHLSNYQHHLQXXXXXXXXXXXXXSPTE-TGATRSDASSSTPERAPAVAANSSPPLAPVSSSFASSSTSALDVPQ-------------------------------PGSFLDVGGALNPM---GSGTEAREIQRSEREAGSGADPSRIKAKQEPMEIPSTREVGLSFRNSVRTNDGGKVFNSGLLGSAGATPTSAAAVLGVGIDRTTSLEALSLLELPHLQGMPNLALLGLGP-ALPTSSSAL-SLTMLPITSVKGGTSGVGLKRTPSWARINSYENLQSLAEEFPLGSTSSGLNGTGASGSDNAGVSHGLGSAPGSG----------------------STPAAFMPRNTSVEDFLSLVESGDIPPPEGSAGFTVPMWIY-GDDSKSVDKAP---ARSTSXXXXXXXXXXXXPDKGSSASSS--------CLISGSVDSGVAEQPRSKRLKASSAKTEAK 3318 KPNGLRRGKWT+EEE+YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQ +DIERSRS+LADLERRFLERVAMTNRCKT GEIG+KEGG D +RP+ PP TQPWMLPPS T S G AAT GV A+ +A G ++AP A A S + L SS + + G + +G + +++H LQ +P T A R+D V N+ + + ++ P SFLD GGAL + G G EA I I A P + +T E GL R S G +SGL GS+G +DRTTSLEALSLLELPH+QGM NLA+LGL P ALP S S+ + T P+ ++ GG LKRTPSWARI+SYE+LQSL E PL S + NG G+ S+ A S + S G G +TP+ FMPRNTSVEDFLSLVESGDIPPPEG+AGFTVPMWIY GD S + + P A + S P S SS G+ + E+P+SKRLK++ AK EAK Sbjct: 348 KPNGLRRGKWTSEEEDYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIGSKEGGSGLDLLRPNQPPPATQPWMLPPSPPAVALAGTPSPAAATQRASVTGAPADAATEGVLSETTAV------------AAEAAG-----HQXXXXXXXXXXXXXXXATAPGSAEVAPSPSSAALPSSSL----LGATHAGPGGVAKAPSGLVLGGPPEQESQHRPLT---LQQQPNAQGTSTTSLAPXXXTPAERND-----------VGVNAGXXXXXXNGNHLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPTSFLDAGGALPSLPRTGDGREASAIPG-------------ITAAVVPKQELTTNETGLGVRTSRSRASNGFNTSSGLGGSSG-------------MDRTTSLEALSLLELPHIQGMTNLAVLGLWPGALPPSGSSTGTATGTPLKAMNGG-----LKRTPSWARISSYEHLQSLDEGAPL-SPMTNCNGAGSVSSNIASSSSNIASGLGGGXXXXXXXXXXXXXXXXXXXXXXATPSPFMPRNTSVEDFLSLVESGDIPPPEGAAGFTVPMWIYSGDSSNTTNGNPNGHAPNGSSSGDSTLAASERPAGHSKPSSKPKNXXXXXXXARGACGTSSLEKPKSKRLKSTQAKAEAK 1018
BLAST of mRNA_F-serratus_M_contig1088.810.1 vs. uniprot
Match: D8LN59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN59_ECTSI) HSP 1 Score: 354 bits (909), Expect = 7.300e-100 Identity = 303/714 (42.44%), Postives = 352/714 (49.30%), Query Frame = 1 Query: 1348 KPNGLRRGKWTTEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQTSDIERSRSELADLERRFLERVAMTNRCKTSGEIGAKEGGRESDAMRPHHPPVVTQPWMLPPSXXXXXXXHT----------STMGQQIPAATPGVTLMNPAINRTFLSSPLASNGCQAPGLSSTARSMAVKQTPPTTAATEVSSAPAVASTATSAV-NVPLAGSSTPKVAMNSNATGSAAAVEVHRQTPVGSHQQPKTEHLSNYQHHLQXXXXXXXXXXXXXSPTETGATRSDASSSTPERAPAVAANSSPPLAPVSSSFASSSTSALDVPQP-----GSFLDVGGALNPM---GSGTEAREIQRSEREAGSGADPSRIKAKQEPMEIPSTREVGLSFRNSVRTNDGGKVFNSGLLGSAGATPTSAAAVLGVGIDRTTSLEALSLLELPHLQGMPNLALLGLGPAL--PTSSSALSLTMLPITSVKGGTSGVGLKRTPSWARINSYENLQSLAEEFPLGSTSSG------------------------LNGTGASGSDNAGVSHGLGSAPGSGSTPAAFMPRNTSVEDFLSLVESGDIPPPEGSAGFTVPMWIY-GDDSKSVDKAP---ARSTSXXXXXXXXXXXXPDKGSSASSSCLISGSVD------SGVA--EQPRSKRLKASSAKTEAK 3318 KPNGLRRGKWT+EEE+YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQ +DIERSRS+LADLERRFLERVAMTNRCKT GEIG+KEGG D +RP+ PP TQPWMLPPS T + G AT GV A+ T P +A EV+ +P+ A+ +S+V AG A N G E + P+ S QQP + S + + G + ++T A AV SFLD GGAL + G G A I S A P + + GL R S G +SGL GS GIDRTTSLEALSLLELPH+QGM NLA+LGL P P+ SS + T P+ ++ GG LKRTPSWARI+SYE+LQSL E PL T++G + FMPRNTSVEDFLSLVESGDIPPPEG+AGFTVPMWIY GD S + + P A XXXXX P S SS SG++ E+ +SKRLK++ AK EAK Sbjct: 259 KPNGLRRGKWTSEEEDYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIGSKEGGSSFDLLRPNQPPPATQPWMLPPSPPAVTLAGTLSPAAATQRANVAGAPADEATGGVLAETTAVAXXXXXXXXXXXXXXXXXX------XXXXATAPGSA--EVAPSPSSAALPSSSVLGASHAGPGGVAKAPNGLVLGGPPEKESQHR-PLTSQQQPNAQGTSTTALAPAPATPAEINDVGVKAGSAAGIANGNHLAATTSAASAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFLDAGGALPSLPGTGDGRVASAIPGST-------------AAVVPKQELTASGTGLGVRTSRSGASNGFNTSSGLGGS--------------GIDRTTSLEALSLLELPHIQGMTNLAVLGLWPGAFPPSGSSTGTTTGTPLKAMNGG-----LKRTPSWARISSYEHLQSLDEGAPLYPTTNGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPFMPRNTSVEDFLSLVESGDIPPPEGAAGFTVPMWIYSGDSSNTTNGNPNGHAXXXXXXXXXTPAASERPAGHSKPSSKXXXXXXXXXXXXXXSGMSSLEKSKSKRLKSTQAKAEAK 931
BLAST of mRNA_F-serratus_M_contig1088.810.1 vs. uniprot
Match: A0A6U0XNE9_9STRA (Hypothetical protein n=3 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XNE9_9STRA) HSP 1 Score: 204 bits (519), Expect = 6.240e-51 Identity = 111/153 (72.55%), Postives = 119/153 (77.78%), Query Frame = 1 Query: 1348 KPNGLRRGKWTTEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQTSDIERSRSELADLERRFLERVAMTNRCKTSG------EIGAKEGGRESDAMRPHH----PPV--VTQPWMLPP 1770 K NGLRRGKWT+EEE YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRL DI+RSR EL+DLERRFLERVA T+RCK + ++G GG +RP H PP PWMLPP Sbjct: 174 KTNGLRRGKWTSEEENYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLTPEDIDRSRQELSDLERRFLERVAQTSRCKNNALGSKGKDMGPGIGGELG--LRPPHGSMFPPANPSVAPWMLPP 324
BLAST of mRNA_F-serratus_M_contig1088.810.1 vs. uniprot
Match: A0A7S1U7I4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7I4_9STRA) HSP 1 Score: 188 bits (478), Expect = 4.960e-50 Identity = 105/168 (62.50%), Postives = 116/168 (69.05%), Query Frame = 1 Query: 1348 KPNGLRRGKWTTEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQTSDIERSRSELADLERRFLERVAMTNRCKTSGE---------------------IGAKEGGRESD------AMRPHHPPVVTQPWMLPP 1770 K NGLRRGKWT EEE YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRRQADMD+L +IERSR ELA+LERRFLERVA + R K SG +G G R+ + +M P++ PWM+PP Sbjct: 53 KSNGLRRGKWTAEEEAYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQADMDKLSPEEIERSRRELAELERRFLERVAQSTRIKGSGGKASXXXXXXXXXTSGVKTESGLGTGHGLRKQEGVPGVMSMNGAQAPMIA-PWMMPP 219
BLAST of mRNA_F-serratus_M_contig1088.810.1 vs. uniprot
Match: A0A7S2DAB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAB7_9STRA) HSP 1 Score: 195 bits (496), Expect = 3.970e-49 Identity = 110/182 (60.44%), Postives = 122/182 (67.03%), Query Frame = 1 Query: 1354 NGLRRGKWTTEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQTSDIERSRSELADLERRFLERVAMTNRCKTSGEIGA-------KEGGRE------------SDAMRPHHPPVVTQPWMLPPSXXXXXXXHTSTMGQQIPAATPGV 1842 +GLRRGKWT EEE YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRL + +IERSR++L+DLE RFLERVA +NRCK S A G E S + HH + PWM+PP H M Q P + G+ Sbjct: 54 SGLRRGKWTPEEESYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLSSDEIERSRAQLSDLEHRFLERVAQSNRCKNSSSTKAVPMKDPMTAGSAELIRPQPMSQSHPSSGIMAHH---MMSPWMMPPQ-------HGQMMPSQAPLSWRGM 225
BLAST of mRNA_F-serratus_M_contig1088.810.1 vs. uniprot
Match: W7TVR2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVR2_9STRA) HSP 1 Score: 195 bits (495), Expect = 5.150e-47 Identity = 107/156 (68.59%), Postives = 117/156 (75.00%), Query Frame = 1 Query: 1354 NGLRRGKWTTEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQ-ADMDRLQTSDIERSRSELADLERRFLERVAMTNRCKTS------------GEIGAKEGGRESDAMRPHHPPV---VTQPWMLPPS 1773 NGLRRGKWT EEE YANRLI EFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRRQ AD+DRL T +IERSR ELA+LERRFLERVA TNRCK S G++ + R+ + + P V V PWMLPP+ Sbjct: 378 NGLRRGKWTPEEEAYANRLIVEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQQADLDRLSTDEIERSRQELAELERRFLERVAQTNRCKNSVAGSKHGKDSAAGQVAPEVPRRQQEYLGPDGRIVGNPVLPPWMLPPA 533
BLAST of mRNA_F-serratus_M_contig1088.810.1 vs. uniprot
Match: A0A7S4J6Z5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J6Z5_9STRA) HSP 1 Score: 177 bits (449), Expect = 5.430e-47 Identity = 95/156 (60.90%), Postives = 109/156 (69.87%), Query Frame = 1 Query: 1360 LRRGKWTTEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQTSDIERSRSELADLERRFLERVAMTNRCKTSGEIGAKEG------------------GRESDAMRPHHPPVVTQPWMLPPS 1773 LRRGKWT EEE YANRLI EFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR AD++RL I++SR EL++LERRFLERVA TNR K+SG G+ + + + H + PW+ PPS Sbjct: 39 LRRGKWTPEEESYANRLILEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRTADINRLTPEQIQQSRQELSELERRFLERVAQTNRVKSSGVGGSXXXXXXXXXXXXXXXXXXXXKAKLEEGLHAHDASPPSPPWLRPPS 194
BLAST of mRNA_F-serratus_M_contig1088.810.1 vs. uniprot
Match: A0A7S1D7J8_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7J8_CYCTE) HSP 1 Score: 174 bits (441), Expect = 3.410e-46 Identity = 95/145 (65.52%), Postives = 111/145 (76.55%), Query Frame = 1 Query: 1369 GKWTTEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQTSDIERSRSELADLERRFLERVAMTNRCKTSGEIGAKEG--------GRESDAMRP---HHPPVVTQPWMLPP 1770 GKWT EEE YANRLIQEFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR AD++RL + I++SR+EL++LERRFLERVA TNR K+SG G+ G D ++ + PP + PW+ PP Sbjct: 1 GKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRTADINRLTSEQIQQSRAELSELERRFLERVAQTNRVKSSGVGGSASXXXXXXXXHGPGVDKVKEDLDNSPP--SPPWLKPP 143
BLAST of mRNA_F-serratus_M_contig1088.810.1 vs. uniprot
Match: A0A8J2SJK4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJK4_9STRA) HSP 1 Score: 186 bits (472), Expect = 3.630e-46 Identity = 97/141 (68.79%), Postives = 108/141 (76.60%), Query Frame = 1 Query: 1348 KPNGLRRGKWTTEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQTSDIERSRSELADLERRFLERVAMTNRCKTSGEIGAKEGGRESDAMRPHHPPVVTQPWMLPP 1770 + NGLRRGKWT EEE YANRLI EFK GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRRQ +MDRL DI+R+R ELA+LERRFL RVA ++R + GAK+ G P+V PW+LPP Sbjct: 72 RENGLRRGKWTVEEEAYANRLIHEFKLGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQLEMDRLSPEDIKRARFELAELERRFLTRVAQSHRSAKATGKGAKDKGPTGALAAAQQRPLVA-PWLLPP 211
BLAST of mRNA_F-serratus_M_contig1088.810.1 vs. uniprot
Match: A0A7R9UAE4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAE4_9STRA) HSP 1 Score: 187 bits (475), Expect = 4.960e-46 Identity = 95/111 (85.59%), Postives = 99/111 (89.19%), Query Frame = 1 Query: 1348 KPNGLRRGKWTTEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQTSDIERSRSELADLERRFLERVAMTNRCKTSG 1680 K NGLRRGKWT EEE YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRRQADMD+L +IERSR ELA+LERRFLERVA + R K SG Sbjct: 115 KSNGLRRGKWTVEEEAYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQADMDKLSPEEIERSRRELAELERRFLERVAQSTRIKGSG 225 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1088.810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1088.810.1 >prot_F-serratus_M_contig1088.810.1 ID=prot_F-serratus_M_contig1088.810.1|Name=mRNA_F-serratus_M_contig1088.810.1|organism=Fucus serratus male|type=polypeptide|length=1097bp MAGQSTTTTPTTEAKGSSSVSGTQASPSVASAAPAASDRPPTPRHQPYPPback to top mRNA from alignment at F-serratus_M_contig1088:85191..107861+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1088.810.1 ID=mRNA_F-serratus_M_contig1088.810.1|Name=mRNA_F-serratus_M_contig1088.810.1|organism=Fucus serratus male|type=mRNA|length=22671bp|location=Sequence derived from alignment at F-serratus_M_contig1088:85191..107861+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1088:85191..107861+ >mRNA_F-serratus_M_contig1088.810.1 ID=mRNA_F-serratus_M_contig1088.810.1|Name=mRNA_F-serratus_M_contig1088.810.1|organism=Fucus serratus male|type=CDS|length=6582bp|location=Sequence derived from alignment at F-serratus_M_contig1088:85191..107861+ (Fucus serratus male)back to top |