mRNA_F-serratus_M_contig1087.806.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI) HSP 1 Score: 302 bits (774), Expect = 8.020e-97 Identity = 150/217 (69.12%), Postives = 180/217 (82.95%), Query Frame = 1 Query: 106 MFKFTAALVLSTIGFTAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTDDLQ---TTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVG-DITASVYDWRNPVAEVFVS 744 M KFTA L+++ A T+++VRVRNLTY+QPFSP+LVVAHT+DVALF+EG+ A+DAIKLMAEDGDNSALLEL SDDVAPYICG V GE P+FP ET R +LT+D+ C D +S+VSMLINTNDAFVGID+DDL ++KVFPPA+DAGTEANNELCTHIPGPAC ADSGN+ED PGE ++H+ RG HGVG D+ + YDWRNPVAEVF++ Sbjct: 1 MVKFTAGFALASVLSLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPV-YSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIA 216
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI) HSP 1 Score: 279 bits (714), Expect = 4.760e-88 Identity = 138/196 (70.41%), Postives = 168/196 (85.71%), Query Frame = 1 Query: 166 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTDDLQ-TTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVG-DITASVYDWRNPVAEVFVSS 747 E VRVRNLTY+QPFSP+ VVAHT+DV++F+EG A+DA+K+MAEDGDNSAL+EL+ S+DV PYICG V+GEAPLFP +T R +TVD+ IC D A++S+VSMLINTNDAFVGID++ L T KVFPPA+DAGTEANNELCTHIPGPAC ADSGN+EDGPGEG++ + RG HGVG D+ + YDWRNPVAEV V++ Sbjct: 6 EVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPD-AQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVAT 200
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI) HSP 1 Score: 279 bits (713), Expect = 1.330e-87 Identity = 140/224 (62.50%), Postives = 171/224 (76.34%), Query Frame = 1 Query: 106 MFKFTAALVLSTI-------GFTAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTDDLQ--TTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVSSV 750 M FTAA ++++ G ++VRVRNLTY+QPFSP L+VAHT DVALF+EG ANDAIKLMAEDGDNSALLEL ES DVAPYICGVVV E P+FP ET R L VD IC + +S+V+MLINTNDAFVGID+D L+ +TK FPPA+DAGTE N+E C++IPGP C A SGN ++GPGEGY+H+ RGVHGVGD+ + YDWRNPVAE+++ + Sbjct: 1 MVNFTAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPV-YSVVTMLINTNDAFVGIDSDTLELGSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVGDLEEASYDWRNPVAEIYIQKL 223
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI) HSP 1 Score: 167 bits (422), Expect = 4.430e-44 Identity = 95/205 (46.34%), Postives = 128/205 (62.44%), Query Frame = 1 Query: 145 GFTAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTD---DLQTTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLED-GPG-EGYVHIQRGVHGVGDITASVYDWRNPVAEVFVS 744 G T+ + +VRV NLT+ Q FSP ++VAH LF G A AIKLMAEDG+N ++ + + CG E PL P +T +T D D C + +S+V+ L NTNDAF+GID D +K+FPPA+DAGTE NNE CT +PG AC A + E+ G G EG++H+ RG++GVGD++ + Y W+NPVAEV VS Sbjct: 67 GGTSRDDKGKVRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPV-YSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVGDLSKADYGWKNPVAEVVVS 267
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI) HSP 1 Score: 162 bits (411), Expect = 2.430e-43 Identity = 94/200 (47.00%), Postives = 124/200 (62.00%), Query Frame = 1 Query: 169 YRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTD---DLQTTKVFPPAYDAGTEANNELCTHIPGPACDADSG---NLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVSSV 750 Y+VRV NLT+ Q FSP ++VAH LF +G A AIK MAE+G N +E+I + + CG E PL P +T +T D + C +S+V+ L NTNDAF+GID D + +K+FPPA+DAGTE NNE CT I G AC A NL EG++H+ RG++GVGD++ + YDW+NPVAEV VS V Sbjct: 4 YKVRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNR-FIEIIATREDG--FCGFAAAEGPLLPGKTWNGEITFDANKCKRPV-YSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVGDLSQADYDWKNPVAEVVVSKV 199
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI) HSP 1 Score: 154 bits (390), Expect = 3.480e-40 Identity = 97/214 (45.33%), Postives = 132/214 (61.68%), Query Frame = 1 Query: 127 LVLSTIGFTA--AVTEYRVRVRNLTYMQPFSPVLVVAHTSDVA-LFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTD---DLQTTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLED-GPG-EGYVHIQRGVHGVGDITASVYDWRNPVAEVFVS 744 L L++ G T+ ++ Y+VRV NLT+ Q FSP ++VAH LF G A AIK MAE+G N ++++I + + CG V E PL P +T +T D + C + +S+V+ L NTNDAF+GID D +K FPPA+DAGTE NNE CT +PG AC A E+ G G EG++H+ RG+ GVGD++ + Y W NPVAEV VS Sbjct: 2 LSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVNG-MVKVIATRESG--FCGFAVAEGPLLPGKTWNGEITFDTNKCKEPV-YSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVGDLSKADYGWNNPVAEVVVS 211
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: A0A7C1WZB3_9BACT (Spondin domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1WZB3_9BACT) HSP 1 Score: 144 bits (362), Expect = 5.010e-36 Identity = 86/201 (42.79%), Postives = 119/201 (59.20%), Query Frame = 1 Query: 166 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFP--LETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGID----TDDLQTTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVSSV 750 E+ V + N+T Q FSPVLV +H+SD ++F G AA+ + +AE+G+N L + D + V G + P ET R+++T D + SL ML+NTNDAFVG+D T D +TT V AYDAGTE N+E C +PGPAC A SG + P EGYV++ GV G+GD++ +YDWRNP A + + V Sbjct: 34 EFDVTITNVTRGQIFSPVLVASHSSDTSVFTPGEAASAELAALAEEGNNMPLAMRLSQD---ANVADVESGSGVILPGTSETIRITVTGKAD------RISLAGMLVNTNDAFVGLDSFQITRDPETT-VRALAYDAGTEFNSESCAFVPGPACGA-SGAHDPTPAEGYVYVSNGVQGIGDLSPELYDWRNPAAIITIRRV 223
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: A0A2A5G8K9_9GAMM (Spondin domain-containing protein n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A2A5G8K9_9GAMM) HSP 1 Score: 140 bits (353), Expect = 7.940e-35 Identity = 82/211 (38.86%), Postives = 123/211 (58.29%), Query Frame = 1 Query: 127 LVLSTIGFTAA--VTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTDDL---QTTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVS 744 L+L++ TA V Y V + NLT F+P+LV +H + V LF+ G AA++ + +AE GD + L + +D+ + V L P E S+TV+ + S+ SM++ TND F+ I + ++ V+ P YDAGTE N+E+C +IPGP C + G + GEGYVHI RG+HG+GD+ A VYDWRNPVA++ ++ Sbjct: 17 LLLASSSATAGNKVRVYDVTITNLTNSITFTPILVASHRNGVTLFEAGSAASEGLTAIAEGGDTAPLAASLSADN---RVAEVKSSGGLLGPGE----SVTVEIKTERHKRRISVASMMLPTNDGFIAIQNIKVPKKRSKTVYSPGYDAGTEPNDEVCANIPGPTCGGE-GLSPEVSGEGYVHINRGIHGIGDLAADVYDWRNPVAKITIT 219
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: UPI0019FF46AD (Spondin domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019FF46AD) HSP 1 Score: 140 bits (353), Expect = 8.620e-35 Identity = 84/227 (37.00%), Postives = 122/227 (53.74%), Query Frame = 1 Query: 97 QDNMFKFTAALVLSTIGFTAAV-----TEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGID----TDDLQTTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVSSV 750 ++ + K + + + F++AV Y V + NLT Q F+P+LV +H V +F+ G AA++ + +AE GD L +E++D VV A L S+TV + SL SMLI TND+F+ ++ +TT + P YDAG+E N+E C HIPGP C G+ E G GEGYVHI G+HG+ D+ A YDWRNP A++ + V Sbjct: 2 KNRLNKIVVSALCGGLLFSSAVLADGGANYEVTITNLTRAQTFTPILVASHREGVKIFELGSAASNELSTLAEGGDVGPLTAALEANDD-------VVDTANSGGLLMPGASVTVTVSARHGAKEISLASMLIPTNDSFIALNGVKAPKGNKTTVYYSPGYDAGSEPNDEDCMHIPGPVCGGAGGSPEAG-GEGYVHISSGIHGIADLAAETYDWRNPTAKIAIQRV 220
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: A0A6M0K546_9GAMM (Uncharacterized protein n=1 Tax=Thiorhodococcus minor TaxID=57489 RepID=A0A6M0K546_9GAMM) HSP 1 Score: 139 bits (350), Expect = 2.690e-34 Identity = 86/201 (42.79%), Postives = 117/201 (58.21%), Query Frame = 1 Query: 160 VTEYRVRVRNLTYMQPFSPVLVVAH--TSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTDDLQT----TKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVS 744 V + VR+ NLT F+P LVVAH SDV LF G A +DA+ +AE GD L +L+ESDD + +APL P E+ + L + SL +ML+ TND FV + + + + + YDAG+E N+ELC +IPGP C+ G+ + G GEGYVHI G+HG+GD+ S+YDWRNPVA V V+ Sbjct: 36 VQDVDVRITNLTQGTLFTPALVVAHRRASDV-LFTPGGAPSDALAALAEGGDTEPLRDLLESDD---RVWSTAEADAPLGPGESVTIRLAA----VPARSAVSLAAMLLPTNDGFVAVQGLRIPSGRFASSTWAEGYDAGSEPNDELCANIPGPDCNGVGGSPDAG-GEGYVHIHSGIHGIGDLEPSLYDWRNPVARVEVT 227 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1087.806.1 >prot_F-serratus_M_contig1087.806.1 ID=prot_F-serratus_M_contig1087.806.1|Name=mRNA_F-serratus_M_contig1087.806.1|organism=Fucus serratus male|type=polypeptide|length=216bp MFKFTAALVLSTIGFTAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFback to top mRNA from alignment at F-serratus_M_contig1087:95484..102034+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1087.806.1 ID=mRNA_F-serratus_M_contig1087.806.1|Name=mRNA_F-serratus_M_contig1087.806.1|organism=Fucus serratus male|type=mRNA|length=6551bp|location=Sequence derived from alignment at F-serratus_M_contig1087:95484..102034+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1087:95484..102034+ >mRNA_F-serratus_M_contig1087.806.1 ID=mRNA_F-serratus_M_contig1087.806.1|Name=mRNA_F-serratus_M_contig1087.806.1|organism=Fucus serratus male|type=CDS|length=1296bp|location=Sequence derived from alignment at F-serratus_M_contig1087:95484..102034+ (Fucus serratus male)back to top |