mRNA_F-serratus_M_contig1087.806.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1087.806.1
Unique NamemRNA_F-serratus_M_contig1087.806.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 8.020e-97
Identity = 150/217 (69.12%), Postives = 180/217 (82.95%), Query Frame = 1 
Query:  106 MFKFTAALVLSTIGFTAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTDDLQ---TTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVG-DITASVYDWRNPVAEVFVS 744
            M KFTA   L+++   A  T+++VRVRNLTY+QPFSP+LVVAHT+DVALF+EG+ A+DAIKLMAEDGDNSALLEL  SDDVAPYICG V GE P+FP ET R +LT+D+  C D   +S+VSMLINTNDAFVGID+DDL    ++KVFPPA+DAGTEANNELCTHIPGPAC ADSGN+ED PGE ++H+ RG HGVG D+  + YDWRNPVAEVF++
Sbjct:    1 MVKFTAGFALASVLSLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPV-YSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIA 216
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BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 4.760e-88
Identity = 138/196 (70.41%), Postives = 168/196 (85.71%), Query Frame = 1 
Query:  166 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTDDLQ-TTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVG-DITASVYDWRNPVAEVFVSS 747
            E  VRVRNLTY+QPFSP+ VVAHT+DV++F+EG  A+DA+K+MAEDGDNSAL+EL+ S+DV PYICG V+GEAPLFP +T R  +TVD+ IC D A++S+VSMLINTNDAFVGID++ L  T KVFPPA+DAGTEANNELCTHIPGPAC ADSGN+EDGPGEG++ + RG HGVG D+  + YDWRNPVAEV V++
Sbjct:    6 EVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPD-AQYSVVSMLINTNDAFVGIDSNRLVGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVAT 200
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BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.330e-87
Identity = 140/224 (62.50%), Postives = 171/224 (76.34%), Query Frame = 1 
Query:  106 MFKFTAALVLSTI-------GFTAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTDDLQ--TTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVSSV 750
            M  FTAA  ++++       G       ++VRVRNLTY+QPFSP L+VAHT DVALF+EG  ANDAIKLMAEDGDNSALLEL ES DVAPYICGVVV E P+FP ET R  L VD  IC +   +S+V+MLINTNDAFVGID+D L+  +TK FPPA+DAGTE N+E C++IPGP C A SGN ++GPGEGY+H+ RGVHGVGD+  + YDWRNPVAE+++  +
Sbjct:    1 MVNFTAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPV-YSVVTMLINTNDAFVGIDSDTLELGSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVGDLEEASYDWRNPVAEIYIQKL 223
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BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 4.430e-44
Identity = 95/205 (46.34%), Postives = 128/205 (62.44%), Query Frame = 1 
Query:  145 GFTAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTD---DLQTTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLED-GPG-EGYVHIQRGVHGVGDITASVYDWRNPVAEVFVS 744
            G T+   + +VRV NLT+ Q FSP ++VAH     LF  G  A  AIKLMAEDG+N  ++ +   +      CG    E PL P +T    +T D D C +   +S+V+ L NTNDAF+GID     D   +K+FPPA+DAGTE NNE CT +PG AC A   + E+ G G EG++H+ RG++GVGD++ + Y W+NPVAEV VS
Sbjct:   67 GGTSRDDKGKVRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPV-YSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVGDLSKADYGWKNPVAEVVVS 267
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BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 2.430e-43
Identity = 94/200 (47.00%), Postives = 124/200 (62.00%), Query Frame = 1 
Query:  169 YRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTD---DLQTTKVFPPAYDAGTEANNELCTHIPGPACDADSG---NLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVSSV 750
            Y+VRV NLT+ Q FSP ++VAH     LF +G  A  AIK MAE+G N   +E+I + +     CG    E PL P +T    +T D + C     +S+V+ L NTNDAF+GID     D + +K+FPPA+DAGTE NNE CT I G AC A      NL     EG++H+ RG++GVGD++ + YDW+NPVAEV VS V
Sbjct:    4 YKVRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNR-FIEIIATREDG--FCGFAAAEGPLLPGKTWNGEITFDANKCKRPV-YSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVGDLSQADYDWKNPVAEVVVSKV 199
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BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 3.480e-40
Identity = 97/214 (45.33%), Postives = 132/214 (61.68%), Query Frame = 1 
Query:  127 LVLSTIGFTA--AVTEYRVRVRNLTYMQPFSPVLVVAHTSDVA-LFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTD---DLQTTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLED-GPG-EGYVHIQRGVHGVGDITASVYDWRNPVAEVFVS 744
            L L++ G T+  ++  Y+VRV NLT+ Q FSP ++VAH      LF  G  A  AIK MAE+G N  ++++I + +     CG  V E PL P +T    +T D + C +   +S+V+ L NTNDAF+GID     D   +K FPPA+DAGTE NNE CT +PG AC A     E+ G G EG++H+ RG+ GVGD++ + Y W NPVAEV VS
Sbjct:    2 LSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVNG-MVKVIATRESG--FCGFAVAEGPLLPGKTWNGEITFDTNKCKEPV-YSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVGDLSKADYGWNNPVAEVVVS 211
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BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: A0A7C1WZB3_9BACT (Spondin domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1WZB3_9BACT)

HSP 1 Score: 144 bits (362), Expect = 5.010e-36
Identity = 86/201 (42.79%), Postives = 119/201 (59.20%), Query Frame = 1 
Query:  166 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFP--LETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGID----TDDLQTTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVSSV 750
            E+ V + N+T  Q FSPVLV +H+SD ++F  G AA+  +  +AE+G+N  L   +  D     +  V  G   + P   ET R+++T   D      + SL  ML+NTNDAFVG+D    T D +TT V   AYDAGTE N+E C  +PGPAC A SG  +  P EGYV++  GV G+GD++  +YDWRNP A + +  V
Sbjct:   34 EFDVTITNVTRGQIFSPVLVASHSSDTSVFTPGEAASAELAALAEEGNNMPLAMRLSQD---ANVADVESGSGVILPGTSETIRITVTGKAD------RISLAGMLVNTNDAFVGLDSFQITRDPETT-VRALAYDAGTEFNSESCAFVPGPACGA-SGAHDPTPAEGYVYVSNGVQGIGDLSPELYDWRNPAAIITIRRV 223
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BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: A0A2A5G8K9_9GAMM (Spondin domain-containing protein n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A2A5G8K9_9GAMM)

HSP 1 Score: 140 bits (353), Expect = 7.940e-35
Identity = 82/211 (38.86%), Postives = 123/211 (58.29%), Query Frame = 1 
Query:  127 LVLSTIGFTAA--VTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTDDL---QTTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVS 744
            L+L++   TA   V  Y V + NLT    F+P+LV +H + V LF+ G AA++ +  +AE GD + L   + +D+    +  V      L P E    S+TV+        + S+ SM++ TND F+ I    +   ++  V+ P YDAGTE N+E+C +IPGP C  + G   +  GEGYVHI RG+HG+GD+ A VYDWRNPVA++ ++
Sbjct:   17 LLLASSSATAGNKVRVYDVTITNLTNSITFTPILVASHRNGVTLFEAGSAASEGLTAIAEGGDTAPLAASLSADN---RVAEVKSSGGLLGPGE----SVTVEIKTERHKRRISVASMMLPTNDGFIAIQNIKVPKKRSKTVYSPGYDAGTEPNDEVCANIPGPTCGGE-GLSPEVSGEGYVHINRGIHGIGDLAADVYDWRNPVAKITIT 219
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BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: UPI0019FF46AD (Spondin domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019FF46AD)

HSP 1 Score: 140 bits (353), Expect = 8.620e-35
Identity = 84/227 (37.00%), Postives = 122/227 (53.74%), Query Frame = 1 
Query:   97 QDNMFKFTAALVLSTIGFTAAV-----TEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGID----TDDLQTTKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVSSV 750
            ++ + K   + +   + F++AV       Y V + NLT  Q F+P+LV +H   V +F+ G AA++ +  +AE GD   L   +E++D        VV  A    L     S+TV         + SL SMLI TND+F+ ++        +TT  + P YDAG+E N+E C HIPGP C    G+ E G GEGYVHI  G+HG+ D+ A  YDWRNP A++ +  V
Sbjct:    2 KNRLNKIVVSALCGGLLFSSAVLADGGANYEVTITNLTRAQTFTPILVASHREGVKIFELGSAASNELSTLAEGGDVGPLTAALEANDD-------VVDTANSGGLLMPGASVTVTVSARHGAKEISLASMLIPTNDSFIALNGVKAPKGNKTTVYYSPGYDAGSEPNDEDCMHIPGPVCGGAGGSPEAG-GEGYVHISSGIHGIADLAAETYDWRNPTAKIAIQRV 220
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BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Match: A0A6M0K546_9GAMM (Uncharacterized protein n=1 Tax=Thiorhodococcus minor TaxID=57489 RepID=A0A6M0K546_9GAMM)

HSP 1 Score: 139 bits (350), Expect = 2.690e-34
Identity = 86/201 (42.79%), Postives = 117/201 (58.21%), Query Frame = 1 
Query:  160 VTEYRVRVRNLTYMQPFSPVLVVAH--TSDVALFQEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLETTRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTDDLQT----TKVFPPAYDAGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVGDITASVYDWRNPVAEVFVS 744
            V +  VR+ NLT    F+P LVVAH   SDV LF  G A +DA+  +AE GD   L +L+ESDD    +      +APL P E+  + L          +  SL +ML+ TND FV +    + +    +  +   YDAG+E N+ELC +IPGP C+   G+ + G GEGYVHI  G+HG+GD+  S+YDWRNPVA V V+
Sbjct:   36 VQDVDVRITNLTQGTLFTPALVVAHRRASDV-LFTPGGAPSDALAALAEGGDTEPLRDLLESDD---RVWSTAEADAPLGPGESVTIRLAA----VPARSAVSLAAMLLPTNDGFVAVQGLRIPSGRFASSTWAEGYDAGSEPNDELCANIPGPDCNGVGGSPDAG-GEGYVHIHSGIHGIGDLEPSLYDWRNPVARVEVT 227
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1087.806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4K4_ECTSI8.020e-9769.12Spondin domain-containing protein n=3 Tax=Ectocarp... [more]
D7G4K3_ECTSI4.760e-8870.41Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7FIE5_ECTSI1.330e-8762.50Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7G3Z4_ECTSI4.430e-4446.34Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G413_ECTSI2.430e-4347.00Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G405_ECTSI3.480e-4045.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7C1WZB3_9BACT5.010e-3642.79Spondin domain-containing protein n=1 Tax=Planctom... [more]
A0A2A5G8K9_9GAMM7.940e-3538.86Spondin domain-containing protein n=1 Tax=Thiotric... [more]
UPI0019FF46AD8.620e-3537.00Spondin domain-containing protein n=1 Tax=Proteoba... [more]
A0A6M0K546_9GAMM2.690e-3442.79Uncharacterized protein n=1 Tax=Thiorhodococcus mi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1087contigF-serratus_M_contig1087:95484..102034 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score304.3
Seed ortholog evalue4.5e-80
Seed eggNOG ortholog2880.D7G4K4
Hectar predicted targeting categorysignal peptide
EggNOG OGs28TMI@1,2S5Q9@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1673
Cds size648
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1087.806.1prot_F-serratus_M_contig1087.806.1Fucus serratus malepolypeptideF-serratus_M_contig1087 95589..101114 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928941.0824566-UTR-F-serratus_M_contig1087:95483..955881622928941.0824566-UTR-F-serratus_M_contig1087:95483..95588Fucus serratus maleUTRF-serratus_M_contig1087 95484..95588 +
1690962637.4333227-UTR-F-serratus_M_contig1087:95483..955881690962637.4333227-UTR-F-serratus_M_contig1087:95483..95588Fucus serratus maleUTRF-serratus_M_contig1087 95484..95588 +
1622928941.1626658-UTR-F-serratus_M_contig1087:101114..1020341622928941.1626658-UTR-F-serratus_M_contig1087:101114..102034Fucus serratus maleUTRF-serratus_M_contig1087 101115..102034 +
1690962637.508487-UTR-F-serratus_M_contig1087:101114..1020341690962637.508487-UTR-F-serratus_M_contig1087:101114..102034Fucus serratus maleUTRF-serratus_M_contig1087 101115..102034 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928941.0952325-CDS-F-serratus_M_contig1087:95588..956571622928941.0952325-CDS-F-serratus_M_contig1087:95588..95657Fucus serratus maleCDSF-serratus_M_contig1087 95589..95657 +
1690962637.4496703-CDS-F-serratus_M_contig1087:95588..956571690962637.4496703-CDS-F-serratus_M_contig1087:95588..95657Fucus serratus maleCDSF-serratus_M_contig1087 95589..95657 +
1622928941.1076603-CDS-F-serratus_M_contig1087:96114..961801622928941.1076603-CDS-F-serratus_M_contig1087:96114..96180Fucus serratus maleCDSF-serratus_M_contig1087 96115..96180 +
1690962637.4681072-CDS-F-serratus_M_contig1087:96114..961801690962637.4681072-CDS-F-serratus_M_contig1087:96114..96180Fucus serratus maleCDSF-serratus_M_contig1087 96115..96180 +
1622928941.1176918-CDS-F-serratus_M_contig1087:99420..995041622928941.1176918-CDS-F-serratus_M_contig1087:99420..99504Fucus serratus maleCDSF-serratus_M_contig1087 99421..99504 +
1690962637.4760017-CDS-F-serratus_M_contig1087:99420..995041690962637.4760017-CDS-F-serratus_M_contig1087:99420..99504Fucus serratus maleCDSF-serratus_M_contig1087 99421..99504 +
1622928941.1306262-CDS-F-serratus_M_contig1087:99860..1000141622928941.1306262-CDS-F-serratus_M_contig1087:99860..100014Fucus serratus maleCDSF-serratus_M_contig1087 99861..100014 +
1690962637.48362-CDS-F-serratus_M_contig1087:99860..1000141690962637.48362-CDS-F-serratus_M_contig1087:99860..100014Fucus serratus maleCDSF-serratus_M_contig1087 99861..100014 +
1622928941.1423519-CDS-F-serratus_M_contig1087:100593..1006741622928941.1423519-CDS-F-serratus_M_contig1087:100593..100674Fucus serratus maleCDSF-serratus_M_contig1087 100594..100674 +
1690962637.4934766-CDS-F-serratus_M_contig1087:100593..1006741690962637.4934766-CDS-F-serratus_M_contig1087:100593..100674Fucus serratus maleCDSF-serratus_M_contig1087 100594..100674 +
1622928941.1533937-CDS-F-serratus_M_contig1087:100920..1011141622928941.1533937-CDS-F-serratus_M_contig1087:100920..101114Fucus serratus maleCDSF-serratus_M_contig1087 100921..101114 +
1690962637.5011535-CDS-F-serratus_M_contig1087:100920..1011141690962637.5011535-CDS-F-serratus_M_contig1087:100920..101114Fucus serratus maleCDSF-serratus_M_contig1087 100921..101114 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1087.806.1

>prot_F-serratus_M_contig1087.806.1 ID=prot_F-serratus_M_contig1087.806.1|Name=mRNA_F-serratus_M_contig1087.806.1|organism=Fucus serratus male|type=polypeptide|length=216bp
MFKFTAALVLSTIGFTAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALF
QEGVAANDAIKLMAEDGDNSALLELIESDDVAPYICGVVVGEAPLFPLET
TRLSLTVDDDICGDDAKFSLVSMLINTNDAFVGIDTDDLQTTKVFPPAYD
AGTEANNELCTHIPGPACDADSGNLEDGPGEGYVHIQRGVHGVGDITASV
YDWRNPVAEVFVSSV*
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mRNA from alignment at F-serratus_M_contig1087:95484..102034+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1087.806.1 ID=mRNA_F-serratus_M_contig1087.806.1|Name=mRNA_F-serratus_M_contig1087.806.1|organism=Fucus serratus male|type=mRNA|length=6551bp|location=Sequence derived from alignment at F-serratus_M_contig1087:95484..102034+ (Fucus serratus male)
CGCCGCCCTACCGATCATTCCACCCTCTCCTCCTTCAATTCTCGTACCGA
TCACACCTCGAACCTGTGCTTACGGATATCAAGTTACCAAGAAAAACAAG
ATAATATGTTCAAGTTCACCGCTGCGCTCGTTCTCTCTACCATCGGCTTC
ACCGCTGCCGTCACGGAATACAGGGTAAGTCGTTTCAGGCTGTTTAGCTA
GTTTACAACCTCAACTATTATTATTAGGTTGCTCGTGTAAATATCAGGGC
ATGATGGACAAGCTATCAGGCTTCGAAGAAGCCATAGGCATAGGGCGTAC
AAGGGTACTAGTGTAGAACATACATCTATCCGAAGGTCAGACagtAGTAG
TAGTAGTGTTGTGACGCAGCAGGTTGCCGTAAGACACGAACTGATAAGCA
CTATACGATTAATATTAGGCTGGGAGAATAGTCTAGGAGAAGAGATATGG
CTACTGATTGCGGCTTGTCGATGACTGAAAACTGAAATATTAAGTCTCGT
GTAGAATACGACGGACCACACGTCGACCGGATTCTTGCGTCGAAGCGTTG
TTCCAACTTGGGTTTTCTTTCTCCCGTTCTGCGTCGCCCATGGGTGGTTT
TTGCCTTACTATAATACCTTCTTTGTGACAGGTCCGCGTGAGGAATCTGA
CCTACATGCAGCCCTTCTCGCCGGTCCTTGTCGTGGCGCACACCTCGGTG
AGTTTTTGAAGTTGGTTGAAAAGAGTGAATTATACTGTTTTTATTGGGGT
TGACTGGTACGTTCAACGCTTGATTAGTAGTTGCCCTTTCATAAAAACCC
CCCTCTAATTCGATCAGCTGAAATGTCAAAACGTGTAGTTAGGTGGGAAC
ATAGACCTAGGCTGTAAGGACTAAACACCCCCACCCCATGGAATTATTAC
ATCGGTCAAGTAGTGTTTCCCTAGTGTCAGCGGGACATAGTCAAGTTGTG
TTTAATAGGAAACACGACGTTGTTACTGGTATACCTAACTAATTAGTATG
TACTCTGGTACACTTCAATTATTAATAACGGCCATAATACTGTTGCAGGT
ACACCAAAACAGTGGCAAAATCTTTTGAGCGACGGCGTAATATGTGGTAC
GGTAGTACTGTATTATTCTAGTTTTATTACAAAATAACGGGTTTTGAAAT
GCAACAGCGCCAACCAACAGAAAGTACCAGTGGTTAATATCTCCTATTAT
TATTATGTCACTCCTGTGTGGCCTCCCTCCTGGCCGGCAGGTGTAGTCTG
ACGTCCACGTATTAACCGAAAGGTGTAGTCTGACGTCCAAACTAACTACC
GGTAAGTGGGATGACAAAAACAGAAAAACTCGTTCAGGTCCTATTATATT
AGCTAGATATAGACTTAATAAGAGCGTAGTTCTTATCGTACTCCCGTTTG
ATTTTCTGGCAAGTCGCAAGAGGTACAACAGAATAATCGCAGAATACGAG
TACTGTACAGCATTATTATTAACAGAAACACACTATGCAGTCTCACAGTT
TTCCTGACTGGAGAATGCTCAGAAGGTATAGGCGCGTTCTGATTTTTCTT
TCGTCTAGTCCCACAGCTTTCCTGTAGTACGTGCAGATTCTCCGAAAAAG
AATTATGGCACGAATTATCCGAATTACTGTTTGAAGCTGTAATACTTGTA
AATTTTTACTAAATTTCCGTCTTTTTTAAAGAAAATAGTATTGATTGATT
GGTTGATTGAACTCTCACATCATTAGCTGTGTTAAAACTCCAGCCCGTGG
TAGCAAGGTAGAAACAAATTGTCTGGAAGGGGAAAACGTGCGAGGTACTC
TCCACGCAAAGAGAAAACTGTTCAATCGTACAAAAATACACGGAAAAAAT
GACAGCTAAAATAAAGAGGGGGGAAAAAGGAAGAATGTCTTGTCAGCACG
CTCAGCAGAATATGGATCAACCGAGTGAATATGGCCGCCAAACCTCGTTA
TTGTTGTATAGTCAGCTGTACAGGGGAAAATATTTGCTGCTGTACACATG
CGCGTGGTCAGCTGAACAGGGAAAAATTGTTGGTATTTTCCCTTTCCCCG
TTCGTGCCTGGAAATTTGGTCTCGCGAGACAAGTTCGGCCGTCTTGTTCC
GCATCAGCGCGCTCATTTTCCAACCTCAGGCTGAATCTGGTATTATACAC
CTTTTTTTGTTTATGTTTTGTATGTATCTCACTTACGGCGGATGAGCCTC
AACGTACGAGGTTACGAATTCCACCTAGTGCAACGTCGCCATCTTGCCTA
TCTATATGGTCACGAAGGATCTTCCCATCACCAGGGGGGTATACCAATGC
AATTTTCAGCACTCGGTGCAAACCAGGCGGCAAATACACCCCGGCCTGGT
AGAGGTACAAACAAAGATAGAATCATGTGATACTAGTATTGTCTTGGTTG
GTGATCCTCGTTTATTTTTGTTTGTTTTATTTTGCTTGGCCTCGCGTGTC
GAATGATGGGCTCTATCTATCCCCTTTGTCCGACCTGTCGCCTGCGACGG
CTGGCTGTCTGAAGCCTTATTTTTCTGGGGGAGGGGCTCCTATTATCGCC
TGTGTGTTGACTTTTCCGTATGGCGGTTATAAATGTATAAATGGACGCCG
CCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACTGCCGAACCCGTCTC
GCGAGACCAACAACAACGCGGACAGGGAAATATTAGTTTTTCCTGTCCAG
CTAACCACGTGCAGGACTGGCAACCTTACTTGGTTGATCCATACGCTTGC
TACATGTATGTGTGACCATTCATTGTTGTTGTTGTTTACACATTCAAAAC
CGTTCCGACCTCTATCTATCCTGTACCTTCTCTTTCTTACTCTTCAAGGC
AAAGAAACGAATTTCCGTGGTCACAGGCTTAACCAAACTAAGGTACAGAA
AAATAAAAAAATAAAAATAGAAGAGACCCAGAGAAAGTTCCAACACTTGC
CAAAAATATGATACAGGTTCCTGAAAATAACAAGTCCAGAAAAACAAGAA
GCAGGTACATACTTAATAACAGGCTTCACGCGAAAGTGAAAGAAACTGCA
AACATACTCCCTTGTAGTTTACGTCATCAATCAGGCAGACGAGTTCATTG
ATACTGGTACTAAACTGTAGATGAAGTCATCGAGGATATTCGTGGCGGCA
TCGTTTATCTGTGACGTACCTCCCTGGGGACAATCGACTTGCGCCCTGAT
CTTCTCTCACTGCGTTTGCCTTCTTACTTATGTATGTATACATAAATCAC
TATCAGTCCAGTGTTGTTCACGCAGGTTCATTTTTCCCTCGTGCCTGTGA
ATCGAGGTGTATTTATTTTTCGTTTCCGGGTGACCAGGAATCGGGTTTGT
TCGCAAGCTGTACGAGTACGTATCGGGGTTGAATATGCGTGATATTCTAC
CTGTATGAACGGTCCTGTAGAGAAAATCCTCGGAATTTTCATGTCGCTTT
TTGTGTTGTCCGTGTTTTTGTAGGTGTGTGTGCCTATGACAAAAAGTGAA
ACATGCGGAGTGGGTCACCTCTCGTTATTTGTCACAGGGAGCGGTTACAC
CCTTCGAAACATGTTTACCTTCAAAAGTTCTACTCTCATCACAGTCAGAG
AAGGATGGAACGTTCAGTTGTCTCCGTGGCCGCATCGTTTACCTCTGCCT
CCTTAGTACCAGTGCAAGCCACTGTTCGGTCTTGAACTATTTTTCTGGAA
CCTCGCATGCCCAGGTTTTACCCTGACCAGACATCGGAAAATGATAACAA
TCTCCTAGGCGGCGTCATTCGCCCGCGATAACTATTAATACTGTGCAGTT
TAGATCGTTTTCATGGTAATTTCTTATCTTGGTACATCAGCTTTCGGGGG
GATAGGATAAAACAAGCTAGGGACGAGACGTCCATCCCCAGCATTGTAAC
CCTCAACCCCCGCATTCTCGCTGCTTGCCGCCTCCAGGATGTGGCCTTGT
TCCAGGAGGGCGTGGCGGCGAATGACGCCATCAAGCTCATGGCGGAGGAC
GGGGACAACTCTGCTCTGCTGGTGAGAAACAGGGCCAACCTTGTCGTATT
GATGTGTCTTGGTAATGTATTTTTACCTTTGTGTGGGTGTACTCCTCTGT
TGTCCTAAAGCTGCTGGTGATCAAGACGGCCTCGCTCCGATCCTGACCAT
TACGAGACACGATAGATGGTTCACAATGTGTCAAAAGCCTATGTGTGAAA
CATTTTGCGGAGAAACATAAAAACATGTACTGTATTCGTTGGAGGAGAAA
ACGTTCTACAAATACCAAGGTCTGTACGAGGAAAAACTGTACTTTAAAGA
CCAAAGTTCCATCTACCCTACTAAATTTCTCACCAAGATCGTCGCGTTAT
GTTTCGCTTTGTGCGCGATCCCCTTAGGAGCTGATAGAATCGGACGACGT
AGCTCCCTACATCTGCGGGGTCGTCGTTGGCGAGGCACCCCTCTTCCCGC
TGGAGACTACAAGGCTTTCCTTGACTGTGGACGATGATATCTGCGGCGAC
GACGCTAAGTTCTCCCTCGTCAGCATGCTCAGTGAGTAGCTATTGTGGTC
TTTTGACGGATCAGTGAGCGAGGGCGGTAGCATCATGTTGCCTGGGTCAT
GTCGTTAATGTGCCATGACGTCCCTCCGGGTAGGTCATGCCTTGCAATCT
AGAGATGGCAGCAACTTGTTGCTTAACTCATTAAGATGCCAAAACCATAA
GACAGTGGAGCGAAAGAATCAGTACGCCGGGTACTTTCTCTCGTCGTGCT
AAGGGTATCCCTCTCACCCGTTAGGCCATTTCCCCCCCTGTTCTACGCGT
GATTGTTGAACGAACTATAATAGTCTTCTATACTCCAGGGGTTTATGCGG
TGCTACTGCATGCGCTTGTCGGGACTGCCGTATCCCCACAACCGTGACCG
GTTGAAGCGCTTGATCGAGAAGTCGTTCACACAATCACGAATGACGCATA
CGATATCCAAATTGGTTTTCTGGCCATCCGCGAGCTTCAACGCTGACGCC
CCTCCTGTTTTGTGTAGAGTGCTTTGTAGCAACTCGCTGCACTTAGATTT
CGGCTAAAAATGCCATTCTCTACATGGCCTGTGCCGCGTTGTCCCTCTGT
CTTCACTCAGTCAACACCAACGACGCCTTCGTGGGTATCGACACCGACGA
CCTCCAAACCACCAAGGTCTTCCCCCCTGCGTACGACGCCGGTCAGTGTA
TTACGGCTGCATCCACGTCTATCAATCTCAGTTCAAATATCATAATAGCA
TATGCTCAAAAGGGCCGAAGGCCTCGAAGACGGACAGACTCAACTCTTGG
AAGGTTTGAGATCTTTCACGGTTGCTACTGCTTCTGAACGGCGTTGTCAC
GAAAGAGAAGTAAGCCGGCTAAATTCTCAAGGAAAACCCCGCTTAACGTA
CTTTACTCTAATCTGGCTGTACCCACGGTCCCGACAGGTACGGAAGCCAA
CAACGAGCTTTGCACTCACATCCCCGGCCCCGCATGCGACGCGGACTCCG
GCAACTTGGAGGACGGCCCGGGGGAGGGATACGTCCACATCCAGCGTGGC
GTACACGGCGTTGGCGACATTACCGCCAGCGTCTACGACTGGAGGAACCC
CGTGGCTGAGGTGTTTGTTTCCAGCGTCTAGGCGTGATTCTGGCTCGTTC
GCTCTGGCATAACTTTGATTTCTGGCTGTCTCCAACGGGGTTGGGGCTGC
GTTGGTTGGGGGTGTCTACGGTCGACATTCGTCGGTCCGGCGTCTCCAGC
GCATAGTTCGCCTTGCTGACCTTGGTTTGGTTCGGCGATGTAATTTTGAA
GGCACGTAAAGGATTTCGCCGCGGCTTCCTGAGCCCTTTTGGCTCTCAGG
GATTGAATCGCGACCGTCTTAGACCCCACCTAGCGTACCTACCGTTATAG
TTCGTTAAGCTTGTCACAGCTTTTTATCGACGGGGCTTCCAATATGTTGG
TTTGTTTCCTTGTGTTCAAGTTTTTTGCTGTCTTCTAACCCAGTATTACA
CCACAGATACATTTCGGATTCATGATATATTACAAGTGCACGAGAAGCCT
TCGCTATGTTACTAAATCAGCTAGCTTCACTCGAGTCCTGGGAGCGTGTT
TGTTCTATCTGGGGATGGTTCAGTTGGTCGGAAATAAGTGTGTACTGATC
GTACGAAGATGAGAGTATGTAGCATTTATTTGGGATGGAGATGTTCTAAT
AAAATCATCTGAAATGGGGCTGTTGAATGGGACTGAATTGATGACTGATA
TGCTCCGAAATTCTGAACTATAGAACATGATTATTCCGAACGCATGAACT
AATCAAAAGTTTTGTCGCTTCTACGCTCTAAAAGCACATTTCCCCATCCC
GGAGCTCTGCATGAGTAGAATTCACCCCAACGCACTCCGGGGCGGTGTAA
TTCCAGCAAATATTAGCGATCTAGCGTGAAACGTGGAAGTTTCTGATTGG
GTAGATTCACAGAAGATATGCGTTCATATTGTCTTCAGACCCCAACAAAG
GGGTAGTGGTAAATGTTCTCGAAACGCTAAAGGTTACGCCGCATTCCTGA
T
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Coding sequence (CDS) from alignment at F-serratus_M_contig1087:95484..102034+

>mRNA_F-serratus_M_contig1087.806.1 ID=mRNA_F-serratus_M_contig1087.806.1|Name=mRNA_F-serratus_M_contig1087.806.1|organism=Fucus serratus male|type=CDS|length=1296bp|location=Sequence derived from alignment at F-serratus_M_contig1087:95484..102034+ (Fucus serratus male)
ATGTTCAAGTTCACCGCTGCGCTCGTTCTCTCTACCATCGGCTTCACCGC
TGCCGTCACGGAATACAGGATGTTCAAGTTCACCGCTGCGCTCGTTCTCT
CTACCATCGGCTTCACCGCTGCCGTCACGGAATACAGGGTCCGCGTGAGG
AATCTGACCTACATGCAGCCCTTCTCGCCGGTCCTTGTCGTGGCGCACAC
CTCGGTCCGCGTGAGGAATCTGACCTACATGCAGCCCTTCTCGCCGGTCC
TTGTCGTGGCGCACACCTCGGATGTGGCCTTGTTCCAGGAGGGCGTGGCG
GCGAATGACGCCATCAAGCTCATGGCGGAGGACGGGGACAACTCTGCTCT
GCTGGATGTGGCCTTGTTCCAGGAGGGCGTGGCGGCGAATGACGCCATCA
AGCTCATGGCGGAGGACGGGGACAACTCTGCTCTGCTGGAGCTGATAGAA
TCGGACGACGTAGCTCCCTACATCTGCGGGGTCGTCGTTGGCGAGGCACC
CCTCTTCCCGCTGGAGACTACAAGGCTTTCCTTGACTGTGGACGATGATA
TCTGCGGCGACGACGCTAAGTTCTCCCTCGTCAGCATGCTCAGAGCTGAT
AGAATCGGACGACGTAGCTCCCTACATCTGCGGGGTCGTCGTTGGCGAGG
CACCCCTCTTCCCGCTGGAGACTACAAGGCTTTCCTTGACTGTGGACGAT
GATATCTGCGGCGACGACGCTAAGTTCTCCCTCGTCAGCATGCTCATCAA
CACCAACGACGCCTTCGTGGGTATCGACACCGACGACCTCCAAACCACCA
AGGTCTTCCCCCCTGCGTACGACGCCGTCAACACCAACGACGCCTTCGTG
GGTATCGACACCGACGACCTCCAAACCACCAAGGTCTTCCCCCCTGCGTA
CGACGCCGGTACGGAAGCCAACAACGAGCTTTGCACTCACATCCCCGGCC
CCGCATGCGACGCGGACTCCGGCAACTTGGAGGACGGCCCGGGGGAGGGA
TACGTCCACATCCAGCGTGGCGTACACGGCGTTGGCGACATTACCGCCAG
CGTCTACGACTGGAGGAACCCCGTGGCTGAGGTGTTTGTTTCCAGCGTCT
AGGTACGGAAGCCAACAACGAGCTTTGCACTCACATCCCCGGCCCCGCAT
GCGACGCGGACTCCGGCAACTTGGAGGACGGCCCGGGGGAGGGATACGTC
CACATCCAGCGTGGCGTACACGGCGTTGGCGACATTACCGCCAGCGTCTA
CGACTGGAGGAACCCCGTGGCTGAGGTGTTTGTTTCCAGCGTCTAG
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