mRNA_F-serratus_M_contig1082.777.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1082.777.1 vs. uniprot
Match: A0A2P4X6C4_9STRA (Integrase catalytic core protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X6C4_9STRA) HSP 1 Score: 152 bits (383), Expect = 7.870e-39 Identity = 89/242 (36.78%), Postives = 134/242 (55.37%), Query Frame = 1 Query: 7 IAVYVDDLLVLNETKQDEHQGLEDLRFTLPIKDLGDILYYLGYHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVKRVPTEK-APLLKADGPQNDAEIAEMRGIPYREAVGDLMWVANMTRPDLAYTANKLATFGDNPGSEHWKTAM*ALQYLKRTATVGVTYGGATEDM------KLSA*VNADHASCPNTRNSLSGGAVILGGEAISWFSRAQRITATATSESEYVALAEIVNELRLLR 711 IAVYVDDLL++ T + L+ + DLG++ Y LG+ I RDRK RT+ Q +YA V +RF P E+ A L + P ++ E M IPYR+AVG +M++ TRPD+A+ +++ F NPG EHWK + L+YL T G+ GG+++ +L A ++D+A+CP+TR S+ G +L ISW SR +T+E+EY+AL + E+ L+ Sbjct: 406 IAVYVDDLLIIAPTPALVSKLKSALKKRFSMSDLGEVKYLLGWSIQRDRKNRTIFIHQHKYATKVIDRFSDYIPYPIATPAERNAKLSVSSQPSSEQEKDAMSSIPYRQAVGSVMYLMVGTRPDMAFYMREVSQFLANPGMEHWKAVIRGLKYLSGTKEYGLLLGGSSDITSENLADQLVAYSDSDYANCPDTRRSVGGYVTMLASSPISWLSRKHHTVVLSTTEAEYIALCHCMQEMIFLK 647
BLAST of mRNA_F-serratus_M_contig1082.777.1 vs. uniprot
Match: A0A401H4R8_9APHY (Uncharacterized protein n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H4R8_9APHY) HSP 1 Score: 150 bits (378), Expect = 9.950e-38 Identity = 89/238 (37.39%), Postives = 127/238 (53.36%), Query Frame = 1 Query: 1 VIIAVYVDDLLVLNETKQDEHQGLEDLRFTLPIKDLGDILYYLGYHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVKRVPTE-KAPLLKADGPQNDAEIAEMRGIPYREAVGDLMWVANMTRPDLAYTANKLATFGDNPGSEHWKTAM*ALQYLKRTATVGVTYGGATEDMKLSA*VNADHASCPNTRNSLSGGAVILGGEAISWFSRAQRITATATSESEYVALAEIVNELRLLR 711 ++I V+VDDL ++ ++ + LR I DLG+I + LG+ + RDR ART+ Q Y ++ +RF P + L A PQ AE A MR IPYREAVG LM+ + TRPD+ Y + L+ F DNPG HW+ +YL T + +TYG + + L +AD S R ++SG A ++ G A+SW S+ Q I A +T+E+EYVA E LR Sbjct: 1228 IVIVVHVDDLTIVTSSRALIDEVKAQLRKAFGISDLGEIHWILGFAVERDRTARTLALSQTSYINSIIQRFGFEDLKPLTTPMDPNTTLSSAQSPQTTAEAAAMRDIPYREAVGSLMYASLGTRPDITYAVSFLSRFSDNPGRAHWEAVKRVFRYLSGTKDLKLTYGA--QGLDLVGYTDAD-GSMHEDRKAISGYAFLIDGGAVSWSSKRQEIIALSTTEAEYVAATHAAKEALWLR 1462
BLAST of mRNA_F-serratus_M_contig1082.777.1 vs. uniprot
Match: A0A2G8SUK6_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SUK6_9APHY) HSP 1 Score: 146 bits (369), Expect = 1.590e-36 Identity = 88/238 (36.97%), Postives = 128/238 (53.78%), Query Frame = 1 Query: 1 VIIAVYVDDLLVLNETKQDEHQGLEDLRFTLPIKDLGDILYYLGYHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVKRVPTEKAPLLKAD-GPQNDAEIAEMRGIPYREAVGDLMWVANMTRPDLAYTANKLATFGDNPGSEHWKTAM*ALQYLKRTATVGVTYGGATEDMKLSA*VNADHASCPNTRNSLSGGAVILGGEAISWFSRAQRITATATSESEYVALAEIVNELRLLR 711 +II V+VDDL + + LR I D G+I + LG+ + RDR ART+ Q Y + + RF + P + L A+ P+ AE+AEMR +PYREAVG L + + TRPD+ Y + L+ F +NPG HW+ +YL T ++ +TYGG D L +AD S + R ++SG A ++ G A+SW S+ Q I + +T+ESEYVA+ E LR Sbjct: 1195 IIIVVHVDDLTIAASCVALVIRVKAKLREAFAISDEGEIHWILGFAVIRDRSARTLSLSQTSYIEAIVRRFGLEDAKPLSTPMDPHVQLTAEQSPKTTAEVAEMRNVPYREAVGSLQYASLGTRPDITYAVSVLSRFLENPGRAHWEACKRVFRYLAGTKSLRLTYGGEQRD--LVGFTDAD-GSMHDDRRAISGYAFLIDGAAVSWASKKQEIISLSTTESEYVAITHATKEALWLR 1429
BLAST of mRNA_F-serratus_M_contig1082.777.1 vs. uniprot
Match: G4TZM0_SERID (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TZM0_SERID) HSP 1 Score: 140 bits (353), Expect = 1.610e-36 Identity = 79/239 (33.05%), Postives = 130/239 (54.39%), Query Frame = 1 Query: 1 VIIAVYVDDLLVLNETKQDEHQGLEDLRFTLPIKDLGDILYYLGYHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVKRVPTEKAPLLKA-DGPQNDAEIAEMRGIPYREAVGDLMWVANMTRPDLAYTANKLATFGDNPGSEHWKTAM*ALQYLKRTATVGVTYGGATEDMKL-SA*VNADHASCPNTRNSLSGGAVILGGEAISWFSRAQRITATATSESEYVALAEIVNELRLLR 711 +I+ V+VDDLL+ +++ + ++L+ I D G + LG + RDR++ T+ Q Y + + E ++++ + P + PLL D PQ + E EMR +PYREA+G L+++A TRPD++Y L F NPG HW LQYL++T +TYG + +L + +AD + S +G + +GG A+ W SR QR T+ +++ESEY + E+ +R Sbjct: 67 IIVPVHVDDLLLASKSSEAIQMVKDELKARFKIHDQGPTSFLLGVKLERDRQSHTISLSQPAYIEQILETYKMQDCNGADTPMAEKPLLSTKDSPQTEQEKLEMRNVPYREALGKLIYLATATRPDISYAVGVLCWFSKNPGQAHWLALKRVLQYLRKTTNYKLTYGLKPDSDELFTTHSDADLGGNADNTRSTAGFVMSIGGGAVMWSSRLQRHTSLSSTESEYTTASATGCEMIWMR 305
BLAST of mRNA_F-serratus_M_contig1082.777.1 vs. uniprot
Match: A0A0J7KA47_LASNI (Retroelement pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KA47_LASNI) HSP 1 Score: 145 bits (367), Expect = 2.850e-36 Identity = 84/233 (36.05%), Postives = 131/233 (56.22%), Query Frame = 1 Query: 1 VIIAVYVDDLLVLNETKQDEHQGLEDLRFTLPIKDLGDILYYLGYHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVKRVPTEKAPLL-KADGPQNDAEIAEMRGIPYREAVGDLMWVANMTRPDLAYTANKLATFGDNPGSEHWKTAM*ALQYLKRTATVGVTYGGATEDMKLSA*VNADHASCPNTRNSLSGGAVILGGEAISWFSRAQRITATATSESEYVALAEIVNE 696 V++A+YVDDLL ++++K + + L I +G Y++G+ I RDR +T+ Q Y V E+F + P E L K+ P++D M IP+REAVG LM+ A ++RPD+ + + ++ + +NPG EHW+ ++Y K TAT G+ Y G + L ++D+AS P+TR S SG +L G A+SW S+ QRI +T+E+EYVA + E Sbjct: 903 VLLAIYVDDLLCMSKSKTAVDKVMAHLMTEFEIT-IGSTEYFVGFKIKRDRSKKTIKISQCNYLLRVAEKFGMMDAKGISTPAESHMYLSKSMAPEDDDGKQAMAKIPFREAVGSLMFAACVSRPDIMFAVSVVSRYLENPGPEHWQAVKRIIRYAKETATYGIVYDGQNTN-GLIVYSDSDYASDPDTRRSTSGYITVLAGGAVSWMSQRQRIVTLSTTEAEYVAACDATKE 1133
BLAST of mRNA_F-serratus_M_contig1082.777.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE) HSP 1 Score: 140 bits (353), Expect = 5.020e-36 Identity = 87/232 (37.50%), Postives = 128/232 (55.17%), Query Frame = 1 Query: 4 IIAVYVDDLLVLNETKQDEHQGLEDLRFTLPIKDLGDILYYLGYHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVKRVPTEKAPLLKADGPQNDAEIAEMRGIPYREAVGDLMWVANMTRPDLAYTANKLATFGDNPGSEHWKTAM*ALQYLKRTATVGVTYG-GATEDMKLSA*VNADHASCPNTRNSLSGGAVILGGEAISWFSRAQRITATATSESEYVALAEIVNE 696 I A++VDD+L TK+ +E L +LP K+LG++ ++LG I+RDR+A T+ Q+ Y + V ERF I +TS P A+ ++ E E +P+RE VG LMW+AN TRP+ + +A P WK A L YLK TA + + Y T D+ V+AD AS R S+SG V++ G +SWFS Q+ + +TSE+EY+A+ + V E Sbjct: 65 IFAIHVDDILYAG-TKRLAEVIVEALGDSLPTKNLGEVRFFLGCEISRDREAGTIEISQESYIRNVLERFNICRTS-------SIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVVGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKE 288
BLAST of mRNA_F-serratus_M_contig1082.777.1 vs. uniprot
Match: A0A1M2W662_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2W662_TRAPU) HSP 1 Score: 141 bits (355), Expect = 5.310e-36 Identity = 89/240 (37.08%), Postives = 124/240 (51.67%), Query Frame = 1 Query: 1 VIIAVYVDDLLVLNETKQDEHQGLEDLRFTLPIKDLGDILYYLGYHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVKRVPTEKAP---LLKADGPQNDAEIAEMRGIPYREAVGDLMWVANMTRPDLAYTANKLATFGDNPGSEHWKTAM*ALQYLKRTATVGVTYGGATEDMKLSA*VNADHASCPNTRNSLSGGAVILGGEAISWFSRAQRITATATSESEYVALAEIVNELRLLR 711 ++I V+VDDL V+ T + LR I D G+I + LG+ + RDR R + Q Y +++ RF + K V T P L A P AEI MR +PYREAVG LM+ + TRPD+ Y + L+ F DNPG HW +YL T + + YG T D L +AD S R ++SG A ++ G A+SW S+ Q + + +T+ESEYVA+ E LR Sbjct: 105 IVIVVHVDDLTVVTATVALVVEVKAKLREAFDISDKGEIHFILGFAVLRDRSNRRLSLSQTAYIESIVRRFGLE--DAKPVSTPMDPHIALTSAQSPSTPAEIGAMRDVPYREAVGSLMYASLGTRPDITYAVSILSRFSDNPGRIHWDAVRRVFRYLNGTKHLKLMYG--TSDFDLVGYSDAD-GSMHEDRKAISGYAFLIDGGAVSWSSKCQELISLSTTESEYVAITHASKEALWLR 339
BLAST of mRNA_F-serratus_M_contig1082.777.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 142 bits (357), Expect = 8.770e-36 Identity = 88/238 (36.97%), Postives = 135/238 (56.72%), Query Frame = 1 Query: 7 IAVYVDDLLV--LNETKQDEHQGLEDLRFTLPIKDLGDILYYLGYHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVKRVPTEKA-PLLKADGPQNDAEIAEMRGIPYREAVGDLMWVANMTRPDLAYTANKLATFGDNPGSEHWKTAM*ALQYLKRTATVGVTYGGATEDMKLSA*VNADHASCPNTRNSLSGGAVILGGEAISWFSRAQRITATATSESEYVALAEIVNELRLLR 711 I +YVDD++V +T+ DE + L RF IK+LG + + LG I DR R + +Q Y +T+ ERF + P E++ L KADGP++D + AEM PYR +G L +VA TRPD+A+ L+ F +NPG HW A+ L+YLK T G++YGG E+ +AD + + R S+SG +++ G I + ++ Q A ++SE+EY+AL+ E+ +R Sbjct: 185 ICLYVDDMVVGGRTQTRVDEVKKLIAARFR--IKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVR 420
BLAST of mRNA_F-serratus_M_contig1082.777.1 vs. uniprot
Match: A0A1M2VT27_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VT27_TRAPU) HSP 1 Score: 140 bits (354), Expect = 9.450e-36 Identity = 91/240 (37.92%), Postives = 128/240 (53.33%), Query Frame = 1 Query: 1 VIIAVYVDDLLVLNETKQDEHQGLEDLRFTLPIKDLGDILYYLGYHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVKRVPTEKAP---LLKADGPQNDAEIAEMRGIPYREAVGDLMWVANMTRPDLAYTANKLATFGDNPGSEHWKTAM*ALQYLKRTATVGVTYGGATEDMKLSA*VNADHASCPNTRNSLSGGAVILGGEAISWFSRAQRITATATSESEYVALAEIVNELRLLR 711 ++I V+VDDL V+ T + LR I D G+I + LG+ + RDR R + Q Y +++ RF + K + T P L A P AEI MR +PYREAVG LM+ + TRPD+ Y + L+ F DNPG HW L+YL T + +TYG ATE + L +AD S R ++SG A ++ G A+SW S+ Q + + +T+ESEYVA+ E LR Sbjct: 120 IVIVVHVDDLTVVAATDALIREVKAKLREAFEISDEGEIHWILGFAVERDRANRRLSLSQTAYIKSIVRRFGLE--DAKPISTPMDPHVALTVAQSPSTPAEIGAMRDVPYREAVGSLMYASLGTRPDITYAVSILSRFSDNPGRTHWDAVRRVLRYLHGTKHLKLTYG-ATE-LDLVGYSDAD-GSMHEDRKAISGYAFLIXGGAVSWSSKRQELISLSTTESEYVAVTHAAKEALWLR 354
BLAST of mRNA_F-serratus_M_contig1082.777.1 vs. uniprot
Match: A0A8J6HXS1_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HXS1_TENMO) HSP 1 Score: 143 bits (360), Expect = 1.310e-35 Identity = 85/234 (36.32%), Postives = 131/234 (55.98%), Query Frame = 1 Query: 1 VIIAVYVDDLLVLNETKQDEHQGLEDLRFTLPIKDLGDILYYLGYHITRDRKARTVMFDQQRYAQTVTERFEIRKTSVKRVPTEKAP-LLKADGPQNDAEIAEMRGIPYREAVGDLMWVANMTRPDLAYTANKLATFGDNPGSEHWKTAM*ALQYLKRTATVGVTYGGATEDMKLSA*VNADHASCPNTRNSLSGGAVILGGEAISWFSRAQRITATATSESEYVALAEIVNEL 699 VII +YVDDL++ ++ + ++ ++++ +KDLG I LG HI RD + + Q+RY + + +F ++ + P + L K P + E EM+ PYRE VG L+++AN TRPD+A+ A+ L+ F NPG EHW A L+YLK T+ VTY + L A ++D A + R S SG + L G ISW S+ Q + +T E+EY AL+E+ E+ Sbjct: 418 VIIIIYVDDLILASKKLEKLNEVKKNMKSEFKMKDLGPINNILGIHIQRDGTGK-IHLSQERYVEELIAKFNMQDAKIASTPIDPCTKLTKEMSPTTEEEKQEMKNRPYRELVGGLIYLANATRPDIAFAASTLSRFCANPGKEHWINAKRVLRYLKGTSYYVVTYD--KDSKNLQAYTDSDWAGDIDDRRSCSGNVLTLAGGPISWKSKKQASVSLSTMEAEYAALSEVSREI 648 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1082.777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1082.777.1 >prot_F-serratus_M_contig1082.777.1 ID=prot_F-serratus_M_contig1082.777.1|Name=mRNA_F-serratus_M_contig1082.777.1|organism=Fucus serratus male|type=polypeptide|length=94bp MFDQQRYAQTVTERFEIRKTSVKRVPTEKAPLLKADGPQNDAEIAEMRGIback to top mRNA from alignment at F-serratus_M_contig1082:134449..135165+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1082.777.1 ID=mRNA_F-serratus_M_contig1082.777.1|Name=mRNA_F-serratus_M_contig1082.777.1|organism=Fucus serratus male|type=mRNA|length=717bp|location=Sequence derived from alignment at F-serratus_M_contig1082:134449..135165+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1082:134449..135165+ >mRNA_F-serratus_M_contig1082.777.1 ID=mRNA_F-serratus_M_contig1082.777.1|Name=mRNA_F-serratus_M_contig1082.777.1|organism=Fucus serratus male|type=CDS|length=564bp|location=Sequence derived from alignment at F-serratus_M_contig1082:134449..135165+ (Fucus serratus male)back to top |