mRNA_F-serratus_M_contig1075.737.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1075.737.1 vs. uniprot
Match: D7G6K8_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K8_ECTSI) HSP 1 Score: 101 bits (252), Expect = 4.040e-20 Identity = 73/221 (33.03%), Postives = 105/221 (47.51%), Query Frame = 1 Query: 397 WNGWKVFSLAILLASSEDRPFLCRSALQSLGNEAVGDTA---------------------GLPKPQLLELLCWYYLSLQPPKKEKDRDEPTGFQTASSVSIERTWGGQGSFRLRADLLSCICAVEKFMFSAQAP-----------------CGDKSEACLTPEQQAVVETNVRAGEVLKVVAFAGTGKTTCLREWAARRPHLRILYAAFNRTVCEEAQRHF 945 W+GW+ F LAI ++S DR LC A++ L E D++ GLP+ +++ELLC +L+ + ++ GS RL+ADLL C +E + Q P + LT EQ+++V +V+ G VL V+AFAGTGKTTCLR +A RPHL+ILY FN +V EEA++ F Sbjct: 529 WSGWEAFGLAIATSASRDRLSLCCWAVRPLMGEDTADSSSGGVHGSGGVRERQRQAPSCPGLPRGEVIELLCLMLCALRSLEGGXXXXXXXXXXXDGLMAQ-----ADGSTRLKADLLVCARVLENWDVRFQKPGHPGXXXXXXXXXXXXXXASGLISNLTAEQRSIVLADVKPGGVLTVLAFAGTGKTTCLRAYAQARPHLKILYLTFNVSVREEAEKTF 744
BLAST of mRNA_F-serratus_M_contig1075.737.1 vs. uniprot
Match: UPI001BD2A6F8 (F-box DNA helicase 1 n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD2A6F8) HSP 1 Score: 83.6 bits (205), Expect = 4.730e-14 Identity = 47/109 (43.12%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 619 ASSVSIERTWGGQGSFRLRADLLSCICAVEKFMFSAQAPCGDKSEACLTPEQQAVVETNVRAGEVLKVVAFAGTGKTTCLREWAARRPHLRILYAAFNRTVCEEAQRHF 945 A+ + R G Q S RL ++ + +E FS + + + LT EQQ ++ N++A V+K+VAFAGTGKTT L ++A +RPHLR LY AFN++V EAQR F Sbjct: 398 ATMLLALRRSGIQVSNRLHYNIYYVLHLMENGPFSVSSGQSGRPQMQLTGEQQHILSHNIQADHVVKIVAFAGTGKTTTLVKYAEQRPHLRFLYVAFNKSVATEAQRRF 506
BLAST of mRNA_F-serratus_M_contig1075.737.1 vs. uniprot
Match: UPI0012EECB09 (F-box DNA helicase 1 n=1 Tax=Anarrhichthys ocellatus TaxID=433405 RepID=UPI0012EECB09) HSP 1 Score: 81.6 bits (200), Expect = 2.070e-13 Identity = 45/106 (42.45%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 628 VSIERTWGGQGSFRLRADLLSCICAVEKFMFSAQAPCGDKSEACLTPEQQAVVETNVRAGEVLKVVAFAGTGKTTCLREWAARRPHLRILYAAFNRTVCEEAQRHF 945 ++++R+W S RL ++ + +E FS + +S+ LT EQQ ++ +V+ V+K+VAFAGTGKTT L ++A +RPHLR LY AFN++V EAQR F Sbjct: 398 LAMKRSWVKISS-RLHYNIYYILHLMENGPFSVCSGQSRRSQIQLTGEQQQILSHDVQGDHVVKIVAFAGTGKTTTLVKYAEQRPHLRFLYVAFNKSVASEAQRRF 502
BLAST of mRNA_F-serratus_M_contig1075.737.1 vs. uniprot
Match: UPI001CE0B5C2 (F-box DNA helicase 1 isoform X1 n=2 Tax=Siniperca chuatsi TaxID=119488 RepID=UPI001CE0B5C2) HSP 1 Score: 81.3 bits (199), Expect = 2.790e-13 Identity = 44/97 (45.36%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 655 QGSFRLRADLLSCICAVEKFMFSAQAPCGDKSEACLTPEQQAVVETNVRAGEVLKVVAFAGTGKTTCLREWAARRPHLRILYAAFNRTVCEEAQRHF 945 Q S RL ++ + +E FS + + E LT EQQ ++ +++ V+K+VAFAGTGKTT L ++A RRPHLR LY AFN++V EAQR F Sbjct: 411 QISNRLHYNIYYVLHLMENGPFSVSSSQSGQPEIHLTHEQQQILSHDIQKDHVVKIVAFAGTGKTTTLVKYAERRPHLRFLYVAFNKSVASEAQRRF 507
BLAST of mRNA_F-serratus_M_contig1075.737.1 vs. uniprot
Match: A0A0S7IDT3_9TELE (DNA helicase (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7IDT3_9TELE) HSP 1 Score: 75.9 bits (185), Expect = 3.820e-13 Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 760 LTPEQQAVVETNVRAGEVLKVVAFAGTGKTTCLREWAARRPHLRILYAAFNRTVCEEAQRHF 945 LT EQQA++ +V+ V+K+VAFAGTGKTT L +AA+RPHLR LY AFN +V EA+R F Sbjct: 13 LTREQQAILSHDVQDDHVVKIVAFAGTGKTTTLVRYAAQRPHLRFLYVAFNNSVASEARRRF 74
BLAST of mRNA_F-serratus_M_contig1075.737.1 vs. uniprot
Match: UPI001ED83FE1 (F-box DNA helicase 1 n=1 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED83FE1) HSP 1 Score: 79.7 bits (195), Expect = 9.060e-13 Identity = 46/116 (39.66%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 598 EPTGFQTASSVSIERTWGGQGSFRLRADLLSCICAVEKFMFSAQAPCGDKSEACLTPEQQAVVETNVRAGEVLKVVAFAGTGKTTCLREWAARRPHLRILYAAFNRTVCEEAQRHF 945 E + S++++R+ Q S RL ++ + +E FS + + + LT EQQ ++ +++ V+K+VAFAGTGKTT L ++A RRPHLR LY AFN++V EAQR F Sbjct: 387 EYLSYMAMMSLALKRS-NIQISNRLHYNIYYVLHLMENGPFSVHSGQSRRPQIHLTREQQQILGHDIQHDHVVKIVAFAGTGKTTTLVKYAERRPHLRFLYVAFNKSVASEAQRRF 501
BLAST of mRNA_F-serratus_M_contig1075.737.1 vs. uniprot
Match: UPI00149025A4 (F-box DNA helicase 1 n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00149025A4) HSP 1 Score: 79.7 bits (195), Expect = 9.090e-13 Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 661 SFRLRADLLSCICAVEKFMFSAQAPCGDKSEACLTPEQQAVVETNVRAGEVLKVVAFAGTGKTTCLREWAARRPHLRILYAAFNRTVCEEAQRHF 945 S RL ++ + +E FS + + + LT EQQ V+ +++A V+K+VAFAGTGKTT L ++A +RPHLR LY AFN++V EAQR F Sbjct: 408 SNRLHYNIYYVLHLMENGPFSVDSGQSRRPQMQLTGEQQQVLSHDIQADHVVKIVAFAGTGKTTTLVKYAEQRPHLRFLYVAFNKSVATEAQRRF 502
BLAST of mRNA_F-serratus_M_contig1075.737.1 vs. uniprot
Match: A0A6G0HQV8_LARCR (DNA helicase n=3 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HQV8_LARCR) HSP 1 Score: 79.3 bits (194), Expect = 1.220e-12 Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 661 SFRLRADLLSCICAVEKFMFSAQAPCGDKSEACLTPEQQAVVETNVRAGEVLKVVAFAGTGKTTCLREWAARRPHLRILYAAFNRTVCEEAQRHF 945 S RL ++ + +E F + + + LT EQQ ++ N+R V+K+VAFAGTGKTT L ++A +RPHLR LY AFN++V EAQR F Sbjct: 412 SNRLHYNIYYVLHLMENGPFPVSSGQSGRPQFHLTGEQQQILSHNIRPDHVVKIVAFAGTGKTTTLVKYAEQRPHLRFLYVAFNKSVASEAQRRF 506
BLAST of mRNA_F-serratus_M_contig1075.737.1 vs. uniprot
Match: A0A8C4HK65_DICLA (DNA helicase n=2 Tax=Moronidae TaxID=42148 RepID=A0A8C4HK65_DICLA) HSP 1 Score: 79.0 bits (193), Expect = 1.650e-12 Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 661 SFRLRADLLSCICAVEKFMFSAQAPCGDKSEACLTPEQQAVVETNVRAGEVLKVVAFAGTGKTTCLREWAARRPHLRILYAAFNRTVCEEAQRHF 945 S RL ++ + +E F + + + LT EQQ ++ N++ +V+K+VAFAGTGKTT L ++A +RPHLR LY AFN++V EAQR F Sbjct: 426 SDRLHYNIYYVLHLMENGPFCVSSGQSSQPQIHLTREQQQILSHNIQQDQVVKIVAFAGTGKTTTLVKYAEQRPHLRFLYVAFNKSVASEAQRRF 520
BLAST of mRNA_F-serratus_M_contig1075.737.1 vs. uniprot
Match: A0A0S7IBN2_9TELE (DNA helicase (Fragment) n=3 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7IBN2_9TELE) HSP 1 Score: 75.9 bits (185), Expect = 2.380e-12 Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 760 LTPEQQAVVETNVRAGEVLKVVAFAGTGKTTCLREWAARRPHLRILYAAFNRTVCEEAQRHF 945 LT EQQA++ +V+ V+K+VAFAGTGKTT L +AA+RPHLR LY AFN +V EA+R F Sbjct: 13 LTREQQAILSHDVQDDHVVKIVAFAGTGKTTTLVRYAAQRPHLRFLYVAFNNSVASEARRRF 74 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1075.737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1075.737.1 >prot_F-serratus_M_contig1075.737.1 ID=prot_F-serratus_M_contig1075.737.1|Name=mRNA_F-serratus_M_contig1075.737.1|organism=Fucus serratus male|type=polypeptide|length=316bp MARLENRVGVLEAIAEKEERELIKNGGGIEHAGEGDGNEAGDPFTDEAERback to top mRNA from alignment at F-serratus_M_contig1075:183009..185888+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1075.737.1 ID=mRNA_F-serratus_M_contig1075.737.1|Name=mRNA_F-serratus_M_contig1075.737.1|organism=Fucus serratus male|type=mRNA|length=2880bp|location=Sequence derived from alignment at F-serratus_M_contig1075:183009..185888+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1075:183009..185888+ >mRNA_F-serratus_M_contig1075.737.1 ID=mRNA_F-serratus_M_contig1075.737.1|Name=mRNA_F-serratus_M_contig1075.737.1|organism=Fucus serratus male|type=CDS|length=1896bp|location=Sequence derived from alignment at F-serratus_M_contig1075:183009..185888+ (Fucus serratus male)back to top |