mRNA_F-serratus_M_contig107.670.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig107.670.1 vs. uniprot
Match: A0A6H5KV27_9PHAE (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV27_9PHAE) HSP 1 Score: 343 bits (881), Expect = 1.060e-100 Identity = 174/235 (74.04%), Postives = 201/235 (85.53%), Query Frame = 1 Query: 715 LLQWVERSSGPDAGFPLIFEAFQSTTQHGRLSSVKASLAGRYVYLRFKCTSGDAMGMNMVSKGCEAAVREVQRRFEQARLVTLSGNMCTDKKPSGMNWTEGRGKSVVVEAILSASTVETVLKTSVDEMVQCNTAKNLVGSAMAGSIGGFNSHAANV----VAAVFLATGQDPAHTVEGSHCITLMEEVRAGEEISCSGCQGDLRVSVTLPCLPVGTVGGGTDLPGQAACLKLAAC 1407 L +W ER SG DAG+PL+F+AFQSTT HG L+SV AS+AGR+VYLRFKCT+G+AMGMNM+SKGCEAAVRE+Q+RF+QARLV LSGN+CTDKK S NW EGRGKSVV EA+LSA TV +VLKT+VD+MV+CN +KNLVGSAMAGSIGGFNSHAANV +AVFLATGQDPAHTVEGS CITLME+V+ GEE S G GDLRV+VT+P L VGTVGGGT LP Q+ACL+L C Sbjct: 68 LRRWAERRSGEDAGYPLLFDAFQSTTNHGSLTSVTASMAGRHVYLRFKCTTGNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKASAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDKMVECNISKNLVGSAMAGSIGGFNSHAANVRLFLSSAVFLATGQDPAHTVEGSSCITLMEKVKPGEEGSGGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMGC 302
BLAST of mRNA_F-serratus_M_contig107.670.1 vs. uniprot
Match: D8LK73_ECTSI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK73_ECTSI) HSP 1 Score: 320 bits (820), Expect = 7.840e-93 Identity = 162/213 (76.06%), Postives = 186/213 (87.32%), Query Frame = 1 Query: 715 LLQWVERSSGPDAGFPLIFEAFQSTTQHGRLSSVKASLAGRYVYLRFKCTSGDAMGMNMVSKGCEAAVREVQRRFEQARLVTLSGNMCTDKKPSGMNWTEGRGKSVVVEAILSASTVETVLKTSVDEMVQCNTAKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEEISCSGCQ-GDLRVSVTLPCLPVGT 1350 L +W ER SG DAG+PL+F+AFQSTT HG L+SV ASLAGR+VYLRFKCT+G+AMGMNM+SKGCEAAVRE+Q+RF+QARLV LSGN+CTDKK S NW EGRGKSVV EA+LSA TV +VLKT+VD+MV+CN +KNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGS CITLME+V+ GEE S G + GDLRV+VT+P L T Sbjct: 275 LRRWAERRSGEDAGYPLLFDAFQSTTSHGSLTSVTASLAGRHVYLRFKCTTGNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKASAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPGEEGSGGGGRPGDLRVTVTMPSLLAAT 487
BLAST of mRNA_F-serratus_M_contig107.670.1 vs. uniprot
Match: M2XG41_GALSU (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XG41_GALSU) HSP 1 Score: 262 bits (669), Expect = 7.940e-73 Identity = 133/224 (59.38%), Postives = 165/224 (73.66%), Query Frame = 1 Query: 724 WVERSSGPDAGFPLIFEAFQSTTQHGRLSSVKASLAGRYVYLRFKCTSGDAMGMNMVSKGCEAAVREVQRRFEQARLVTLSGNMCTDKKPSGMNWTEGRGKSVVVEAILSASTVETVLKTSVDEMVQCNTAKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEEISCSGCQGDLRVSVTLPCLPVGTVGGGTDLPGQAACLK 1395 W+E+ F L+ E F ST+++GRL SVK ++AGR +YLRFKC SGDAMGMNMVSKG E A+ ++ F + +V+LSGN C+DKKPS +NW EGRGK+VV EA++S VE VLKT+V MV CN KNLVGS MAGS+GGFN+HAAN+VAA+F+ATGQD A VE SHCITL+E G DLR+SVTLPC+ VGTVGGGT LP Q++CL+ Sbjct: 302 WLEQEDT----FELLSEQFNSTSRYGRLQSVKVAIAGRNLYLRFKCLSGDAMGMNMVSKGTEKALEVIKAHFSEMEVVSLSGNYCSDKKPSAVNWIEGRGKTVVAEAVISGDVVEKVLKTNVASMVDCNIQKNLVGSIMAGSLGGFNAHAANIVAAIFIATGQDAAQVVESSHCITLLEPANNGR---------DLRISVTLPCVEVGTVGGGTVLPAQSSCLR 512
BLAST of mRNA_F-serratus_M_contig107.670.1 vs. uniprot
Match: A0A835YX65_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX65_9STRA) HSP 1 Score: 253 bits (646), Expect = 5.730e-70 Identity = 134/230 (58.26%), Postives = 162/230 (70.43%), Query Frame = 1 Query: 721 QWVERSSGPDAGFPLIFEAFQSTTQHGRLSSVKASLAGRYVYLRFKCTSGDAMGMNMVSKGCEAAVREVQRRFEQARLVTLSGNMCTDKKPSGMNWTEGRGKSVVVEAILSASTVETVLKTSVDEMVQCNTAKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEEISCSGCQGDLRVSVTLPCLPVGTVGGGTDLPGQAACLKLAACR 1410 QWVE A F + AF+STT GRL++V ++AGR VYLRF C +GDAMGMNMVSKGC AAV + F + L+ +SGNMCTDKKP+ +NW EGRGKSVV EA + VE+ LKT+V +V+ N KNL+GSA+AG++GGFN+HA+NVV AVFLATGQDPA VE S C+TLMEE GDL VSV +PC+ VGTVGGGT LP QAACL + CR Sbjct: 297 QWVEAP----ANFARVKAAFESTTSFGRLNAVTGAVAGRNVYLRFVCAAGDAMGMNMVSKGCLAAVDLLTEAFPELELIAISGNMCTDKKPAAINWIEGRGKSVVCEARIPGRYVESTLKTTVRAIVETNVQKNLIGSALAGALGGFNAHASNVVTAVFLATGQDPAQNVEASMCMTLMEETD----------DGDLLVSVNMPCIEVGTVGGGTSLPAQAACLDVIGCR 512
BLAST of mRNA_F-serratus_M_contig107.670.1 vs. uniprot
Match: F0ZER0_DICPU (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZER0_DICPU) HSP 1 Score: 249 bits (635), Expect = 6.220e-69 Identity = 128/228 (56.14%), Postives = 162/228 (71.05%), Query Frame = 1 Query: 715 LLQWVERSSGPDAGFPLIFEAFQSTTQHGRLSSVKASLAGRYVYLRFKCTSGDAMGMNMVSKGCEAAVREVQRRFEQARLVTLSGNMCTDKKPSGMNWTEGRGKSVVVEAILSASTVETVLKTSVDEMVQCNTAKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEEISCSGCQGDLRVSVTLPCLPVGTVGGGTDLPGQAACLKL 1398 L QW+E F + AF ST++ RL ++K +AGR VYLRFK ++GDAMGMNMVSKG E A+ + F + +++LSGN+CTDKKPS +NW EGRGKSVV EA++S V VLKT+VD +V N KNL+GSAMAGSIGGFN+HA+N+V A+++ATGQDPA VE S+CITLME + G+ DL +SVT+P + VGTVGGGT LP QAACL L Sbjct: 229 LKQWIENQEN----FYQVASAFNSTSRFARLKNIKVVIAGRLVYLRFKSSTGDAMGMNMVSKGVEKAMEVISEYFPELEVLSLSGNVCTDKKPSAINWLEGRGKSVVAEAVISGDIVRDVLKTTVDSLVSLNVDKNLIGSAMAGSIGGFNAHASNIVTALYIATGQDPAQNVESSNCITLMESINNGK---------DLYISVTMPSIEVGTVGGGTHLPAQAACLDL 443
BLAST of mRNA_F-serratus_M_contig107.670.1 vs. uniprot
Match: A0A2G5B406_COERN (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B406_COERN) HSP 1 Score: 246 bits (629), Expect = 1.850e-68 Identity = 128/238 (53.78%), Postives = 168/238 (70.59%), Query Frame = 1 Query: 715 LLQWVERSSGPDAGFPLIFEAFQSTTQHGRLSSVKASLAGRYVYLRFKCTSGDAMGMNMVSKGCEAAVREVQRRFEQARLVTLSGNMCTDKKPSGMNWTEGRGKSVVVEAILSASTVETVLKTSVDEMVQCNTAKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEEISCSGCQGDLRVSVTLPCLPVGTVGGGTDLPGQAACLKLAACRTTAPQC 1428 L W+E D+G + AFQ+T++ +L S+K +LAGR V++RF +GDAMGMNM+SKGCE A+R +Q RF +V +SGN CTDKKP+ +NW +GRGKSVV EAI+ + V +VLK+SVD++ + N +KNL+GSAMAG++GGFN+HAAN + AVFLATGQDPA VE S CITLME G+ DLR+S ++P + VGTVGGGT LP QAACL + CR +C Sbjct: 187 LKAWLES----DSGLADVRAAFQATSRFAKLRSLKIALAGRLVFVRFTTFTGDAMGMNMISKGCEQALRLIQERFADCDVVAVSGNYCTDKKPAAINWIDGRGKSVVSEAIIPGAVVRSVLKSSVDDLCRLNVSKNLIGSAMAGALGGFNAHAANTLTAVFLATGQDPAQNVESSTCITLMEPANDGQ---------DLRISCSMPSIEVGTVGGGTVLPPQAACLDMLGCRGPNREC 411
BLAST of mRNA_F-serratus_M_contig107.670.1 vs. uniprot
Match: HMDH2_DICDI (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=HMDH2_DICDI) HSP 1 Score: 247 bits (630), Expect = 3.850e-68 Identity = 127/228 (55.70%), Postives = 162/228 (71.05%), Query Frame = 1 Query: 715 LLQWVERSSGPDAGFPLIFEAFQSTTQHGRLSSVKASLAGRYVYLRFKCTSGDAMGMNMVSKGCEAAVREVQRRFEQARLVTLSGNMCTDKKPSGMNWTEGRGKSVVVEAILSASTVETVLKTSVDEMVQCNTAKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEEISCSGCQGDLRVSVTLPCLPVGTVGGGTDLPGQAACLKL 1398 L QW+E F + AF ST++ RL S+K +AGR VYLRFK ++GDAMGMNMVSKG E A+ + F + +++LSGN+CTDKKPS +NW EGRGKSVV EA++S V VLKT+V+ +V N KNL+GSAMAGSIGGFN+HA+N+V A+++ATGQDPA VE S+CITLME + G+ DL +SVT+P + VGTVGGGT LP Q+ACL L Sbjct: 239 LKQWIENQEN----FYQVASAFNSTSRFARLKSIKVVIAGRLVYLRFKSSTGDAMGMNMVSKGVEKALEVITEYFPEMEVLSLSGNVCTDKKPSSINWLEGRGKSVVAEAVISGDIVRDVLKTTVEALVSLNIDKNLIGSAMAGSIGGFNAHASNIVTALYIATGQDPAQNVESSNCITLMESINGGK---------DLYISVTMPSIEVGTVGGGTHLPAQSACLDL 453
BLAST of mRNA_F-serratus_M_contig107.670.1 vs. uniprot
Match: A0A5A8D6R8_CAFRO (3-hydroxy-3-methylglutaryl coenzyme A reductase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D6R8_CAFRO) HSP 1 Score: 247 bits (631), Expect = 4.990e-68 Identity = 138/256 (53.91%), Postives = 174/256 (67.97%), Query Frame = 1 Query: 679 RAKLERVSSLFL---LLQWVERSSGPDAGFPLIFEAFQSTTQHGRLSSVKASLAGRYVYLRFKCTSGDAMGMNMVSKGCEAAVREVQRRFEQARLVTLSGNMCTDKKPSGMNWTEGRGKSVVVEAILSASTVETVLKTSVDEMVQCNTAKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEEISCSGCQGDLRVSVTLPCLPVGTVGGGTDLPGQAACLKLAACRTTAPQCVKP 1437 RA L R+ SL L WVE F L+ EAF ST++ GRL S+ S AGR YLRFKC++GDAMGMNM++KG AA+ V RF AR+++LSGN+CTDKKPS +NW +GRGKSV E +LS VE LKT+ D +V+ NT KNL+GSA+AGSIGGFN+HAAN+V+AVFLATGQD A VE S C+TL+E ++ + +G + SVT+P + VGTVGGGT L QAACL L R A + + P Sbjct: 165 RAPLLRMPSLEAAAELKAWVENPEN----FKLVAEAFSSTSRFGRLQSLVVSTAGRNAYLRFKCSTGDAMGMNMITKGVNAALAAVVERFPTARILSLSGNVCTDKKPSAINWVDGRGKSVTAEVVLSRDIVENTLKTTADALVELNTGKNLIGSAVAGSIGGFNAHAANIVSAVFLATGQDVAQNVESSMCLTLLEH----DDDPAN--EGGIIASVTMPSIEVGTVGGGTSLSSQAACLDLLGLRGAAAEPLTP 410
BLAST of mRNA_F-serratus_M_contig107.670.1 vs. uniprot
Match: I1BTQ7_RHIO9 (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BTQ7_RHIO9) HSP 1 Score: 246 bits (629), Expect = 7.100e-68 Identity = 122/234 (52.14%), Postives = 168/234 (71.79%), Query Frame = 1 Query: 721 QWVERSSGPDAGFPLIFEAFQSTTQHGRLSSVKASLAGRYVYLRFKCTSGDAMGMNMVSKGCEAAVREVQRRFEQARLVTLSGNMCTDKKPSGMNWTEGRGKSVVVEAILSASTVETVLKTSVDEMVQCNTAKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEEISCSGCQGDLRVSVTLPCLPVGTVGGGTDLPGQAACLKLAACRTTAP 1422 QW+E+ G ++ +AF ST++ R+ +K ++AG+ VYLRF T+GDAMGMNM+SKGCE A+ +++ F ++++LSGN CTDKKP+ +NW EGRGKS V EA++ A+ VE VLKT+VD +V+ N +KNLVGSAMAGS+GGFN+HAAN++ AV+LATGQDPA VE S+C+TLM+ + G+ DL +S T+PC+ VGT+GGGT LP Q A L + R P Sbjct: 249 QWIEQE-----GKDIVADAFNSTSRFARVKKLKVAIAGKLVYLRFSTTTGDAMGMNMISKGCEKALSKIEEYFPDMQIISLSGNFCTDKKPAAVNWIEGRGKSTVAEAVIPAAVVEKVLKTTVDALVELNISKNLVGSAMAGSVGGFNAHAANILTAVYLATGQDPAQNVESSNCMTLMKAINDGK---------DLYISCTMPCIEVGTIGGGTILPPQQAMLDMLGVRGPHP 468
BLAST of mRNA_F-serratus_M_contig107.670.1 vs. uniprot
Match: A0A8J4UZC2_9MYCE (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UZC2_9MYCE) HSP 1 Score: 247 bits (630), Expect = 1.260e-67 Identity = 135/272 (49.63%), Postives = 181/272 (66.54%), Query Frame = 1 Query: 607 SRRCCVTSTTPVGLGCRVEIALFERAKLERVSSLFLLLQWVERSSGPDAGFPLIFEAFQSTTQHGRLSSVKASLAGRYVYLRFKCTSGDAMGMNMVSKGCEAAVREVQRRFEQARLVTLSGNMCTDKKPSGMNWTEGRGKSVVVEAILSASTVETVLKTSVDEMVQCNTAKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEEISCSGCQGDLRVSVTLPCLPVGTVGGGTDLPGQAACLKLAACRTTAP 1422 + R C + G C++ RA + R SS+ + ++VE + A + + + F ST++ RLS++K ++AGR VY+RFKC +GDAMGMNMVSKG EA + + F+ ++++SGNMCTDKKPS +NWTEGRG+SVV EAI++ VE VLKTSV +V N AKNL+GSAMAGSIGGFN+HAAN+V A+FLATGQD A VE S+CIT ME G+ DL ++VT+P + VGTVGGGT L Q+ CL + R + P Sbjct: 257 THRGCKAISESGGARCQIISRGMTRAPVVRFSSIVKVSEFVEWMNQA-ANYESVKQIFDSTSRFARLSAIKTTVAGRSVYIRFKCDTGDAMGMNMVSKGVEAVLNFFKGLFDDLEILSISGNMCTDKKPSSINWTEGRGRSVVCEAIINGDIVEKVLKTSVQALVDLNIAKNLIGSAMAGSIGGFNAHAANIVTAIFLATGQDCAQNVESSNCITQMEAFNDGK---------DLYITVTMPSIEVGTVGGGTGLAAQSQCLDIIGVRGSTP 518 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig107.670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig107.670.1 >prot_F-serratus_M_contig107.670.1 ID=prot_F-serratus_M_contig107.670.1|Name=mRNA_F-serratus_M_contig107.670.1|organism=Fucus serratus male|type=polypeptide|length=430bp MTESRERLVSPCQMSASPSSSSRFSTRFRERFPSRAAKTHRQFASAMCSRback to top mRNA from alignment at F-serratus_M_contig107:110265..116562+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig107.670.1 ID=mRNA_F-serratus_M_contig107.670.1|Name=mRNA_F-serratus_M_contig107.670.1|organism=Fucus serratus male|type=mRNA|length=6298bp|location=Sequence derived from alignment at F-serratus_M_contig107:110265..116562+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig107:110265..116562+ >mRNA_F-serratus_M_contig107.670.1 ID=mRNA_F-serratus_M_contig107.670.1|Name=mRNA_F-serratus_M_contig107.670.1|organism=Fucus serratus male|type=CDS|length=2580bp|location=Sequence derived from alignment at F-serratus_M_contig107:110265..116562+ (Fucus serratus male)back to top |