mRNA_F-serratus_M_contig107.668.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A6H5KVR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR4_9PHAE) HSP 1 Score: 285 bits (730), Expect = 5.160e-84 Identity = 138/214 (64.49%), Postives = 161/214 (75.23%), Query Frame = 3 Query: 1626 SGKDYASEAGAPRACAGSRSRSGSRLXXXXXXXXXXXXDNQSLMKVSGGSFKCSRCLQRCGSIHERK--ITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRLNCEDKTGVPRDPSSAFQGPC 2261 +GKDYASEA + R+RS SR X + S +C+RCL+ C S K I RTLPMEYWVRTP CKAAKSKH++++D + YSREQFIEETVFTCPFTGA+R+IVLERNMFPYDVPTDVEHWTLWSR+DL + EM+ FV+ W A+NHPHAVEWE DNNEG+RSIDWFHVHVFFRL CED+TGVPRDP+S + GPC Sbjct: 238 TGKDYASEASSSTR---KRNRSCSRERSSRGDSXGRSSKKAATTAESRSGVECARCLEWCRSSRTPKTPIPRTLPMEYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPKDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPC 448
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: D8LK74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK74_ECTSI) HSP 1 Score: 277 bits (708), Expect = 9.190e-81 Identity = 135/212 (63.68%), Postives = 154/212 (72.64%), Query Frame = 3 Query: 1632 KDYASEAGAPRACAGSRSRSGSRLXXXXXXXXXXXXDNQSLMKVSGGSFKCSRCLQRCGSIHERK--ITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRLNCEDKTGVPRDPSSAFQGPC 2261 KDYASEA + R R+RS SR S +C+RCL+ C K I RTL M+YWVRTP CKAAKSKH++++D + YSREQFIEETVFTCPFTGA+R IVLERNMFPYDVPTDVEHWTLWSRKDL EM+ FV+ W A+NHPHAVEWE DNNEG+RSIDWFHVHVFFRL CED+TGVPRDP+S + GPC Sbjct: 246 KDYASEASSSR----KRNRSCSRERGSRGDSRGRSSRKTPTTAESRCGVECARCLEWCRPSRSPKTPIPRTLQMDYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRAIVLERNMFPYDVPTDVEHWTLWSRKDLPNDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPC 453
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A836CLJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ2_9STRA) HSP 1 Score: 157 bits (398), Expect = 4.030e-39 Identity = 69/125 (55.20%), Postives = 88/125 (70.40%), Query Frame = 3 Query: 1830 TRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRLN 2204 T +PME+WVR CK K++HL+++D SREQFIE+TVFT P TG R+ VLE NMFPY P DVEHWTLWSR D+ E++ +V +W+ N PH W YD+N GDRSI WFHVHV+ + + Sbjct: 128 TMDMPMEFWVRGEECKRLKTEHLDFIDSHYSSREQFIEDTVFTDPMTGEVRDTVLEPNMFPYQTPPDVEHWTLWSRSDMTHEEIQAWVTEWLMVNKPHVRRWNYDDNAGDRSIYWFHVHVYIQYD 252
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A6U1PGM4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PGM4_9STRA) HSP 1 Score: 122 bits (306), Expect = 4.910e-28 Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 3 Query: 1809 SIHERKITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRL 2201 S + RTL +EYW RT C K H++++D SRE FI ET R+ +LE NMFPYD P D+ HWT+W R ++ + E+ +VE W+ K +P+ VEW YD+N G+RSID +HVHV+FR+ Sbjct: 57 SCNSNSPPRTLTIEYWDRTDDCINKKWDHMDFIDANFDSRENFILETALL------NRDHMLEPNMFPYDTPEDILHWTMWCRWEMSEEELIKYVENWMKK-YPYIVEWNYDDNAGERSIDLYHVHVYFRV 180
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: D0MWK7_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MWK7_PHYIT) HSP 1 Score: 120 bits (300), Expect = 4.510e-26 Identity = 61/133 (45.86%), Postives = 78/133 (58.65%), Query Frame = 3 Query: 1803 CGSIHERKITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRL 2201 C S R+ RTL +EYW RT CK K HL+ + + S E+ I F G R LE NMFPYD P +EHWTLW KDL+ ++K +VE W+ N PH W YD+N +RSID FHVHV+F++ Sbjct: 172 CSSESTRRSRRTLYIEYWSRTDECKERKWDHLDEIAENYGSAEEHI----FATTLKG--RTAFLEPNMFPYDTPAGIEHWTLWHVKDLNHEQVKKYVENWIDANAPHVARWNYDDNP-ERSIDIFHVHVYFQV 297
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A3M6VCZ3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCZ3_9STRA) HSP 1 Score: 113 bits (283), Expect = 5.460e-26 Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = 3 Query: 1833 RTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFR 2198 RTL +EYW RT C K H++ +D+M SRE+ I T T +E VLE NMFPYD P + HWTLWSR +++ +E+++FV W+ +N P W YD N RSID FHVHV+ + Sbjct: 2 RTLVVEYWDRTDECLERKWAHMDMVDRMFNSREELILAT------TLHHKETVLEPNMFPYDTPKGISHWTLWSRHEMNHTEIEEFVCNWIRENAPQVERWNYDENLS-RSIDIFHVHVYLK 116
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: W2K7Z7_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2K7Z7_PHYPR) HSP 1 Score: 119 bits (299), Expect = 6.110e-26 Identity = 61/133 (45.86%), Postives = 78/133 (58.65%), Query Frame = 3 Query: 1803 CGSIHERKITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRL 2201 C S R+ RTL +EYW RT CK K HL+ + + S E+ I F G R LE NMFPYD P +EHWTLW KDL+ ++K +VE W+ N PH W YD+N +RSID FHVHV+F++ Sbjct: 172 CSSESPRRSRRTLYIEYWSRTDECKERKWDHLDEIAENFGSAEEHI----FATTLKG--RTAFLEPNMFPYDTPAGIEHWTLWHVKDLNHEQVKQYVENWIDANAPHVERWNYDDNP-ERSIDIFHVHVYFQV 297
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A6A3KAU7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KAU7_9STRA) HSP 1 Score: 115 bits (288), Expect = 6.970e-26 Identity = 56/123 (45.53%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 1830 TRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFR 2198 TRTL ++YW RT C K H++ +D + SRE+ I T T + E LE NMFPYD P +EHWTLWSR ++D +E++++V W+ +N PH W YD N RSID FHVHV+ + Sbjct: 58 TRTLALQYWDRTDECLERKWAHMDMVDDLFESREELILAT------TLSHTETALEPNMFPYDTPDGIEHWTLWSRHEMDNAEIEEYVCDWLRENAPHVERWNYDENLS-RSIDIFHVHVYLQ 173
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: H3GM77_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GM77_PHYRM) HSP 1 Score: 116 bits (291), Expect = 1.060e-25 Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 1821 RKITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRL 2201 R+ RTL +EYW RT CK K HL+ + + S E+ I F G R LE NMFPYD P +EHWTLW KDL+ ++K +VE W+ N PH W YD+N +RSID FHVHV+F++ Sbjct: 95 RRSLRTLYVEYWSRTDECKERKWDHLDEIAENYGSAEEHI----FATTLKG--RTAFLEPNMFPYDTPAGIEHWTLWHVKDLNHEQVKQYVENWIDANAPHVQRWNYDDNP-ERSIDIFHVHVYFQV 214
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A2D4C5Q1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5Q1_PYTIN) HSP 1 Score: 114 bits (284), Expect = 1.370e-25 Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 1815 HERKITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRL 2201 ++R RTL +EYW RT CK K HL+ + S E+ I F G R LE NMFPYD P +EHWTLW +L+ ++K +VE W+ N PH + W YD+N +RSID FHVHV+F++ Sbjct: 22 YKRHSRRTLYIEYWSRTDECKERKWDHLDDIADKYGSAEEHI----FATTLNG--RTAFLEPNMFPYDTPAGIEHWTLWHVNELNHEQIKQYVENWIDANAPHVLRWNYDDNP-ERSIDIFHVHVYFQV 143 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig107.668.1 >prot_F-serratus_M_contig107.668.1 ID=prot_F-serratus_M_contig107.668.1|Name=mRNA_F-serratus_M_contig107.668.1|organism=Fucus serratus male|type=polypeptide|length=197bp MKVSGGSFKCSRCLQRCGSIHERKITRTLPMEYWVRTPACKAAKSKHLEYback to top mRNA from alignment at F-serratus_M_contig107:103791..106750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig107.668.1 ID=mRNA_F-serratus_M_contig107.668.1|Name=mRNA_F-serratus_M_contig107.668.1|organism=Fucus serratus male|type=mRNA|length=2960bp|location=Sequence derived from alignment at F-serratus_M_contig107:103791..106750- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig107:103791..106750- >mRNA_F-serratus_M_contig107.668.1 ID=mRNA_F-serratus_M_contig107.668.1|Name=mRNA_F-serratus_M_contig107.668.1|organism=Fucus serratus male|type=CDS|length=1182bp|location=Sequence derived from alignment at F-serratus_M_contig107:103791..106750- (Fucus serratus male)back to top |