mRNA_F-serratus_M_contig107.668.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig107.668.1
Unique NamemRNA_F-serratus_M_contig107.668.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A6H5KVR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR4_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 5.160e-84
Identity = 138/214 (64.49%), Postives = 161/214 (75.23%), Query Frame = 3 
Query: 1626 SGKDYASEAGAPRACAGSRSRSGSRLXXXXXXXXXXXXDNQSLMKVSGGSFKCSRCLQRCGSIHERK--ITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRLNCEDKTGVPRDPSSAFQGPC 2261
            +GKDYASEA +       R+RS SR        X       +    S    +C+RCL+ C S    K  I RTLPMEYWVRTP CKAAKSKH++++D + YSREQFIEETVFTCPFTGA+R+IVLERNMFPYDVPTDVEHWTLWSR+DL + EM+ FV+ W A+NHPHAVEWE DNNEG+RSIDWFHVHVFFRL CED+TGVPRDP+S + GPC
Sbjct:  238 TGKDYASEASSSTR---KRNRSCSRERSSRGDSXGRSSKKAATTAESRSGVECARCLEWCRSSRTPKTPIPRTLPMEYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRDIVLERNMFPYDVPTDVEHWTLWSRRDLPKDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPC 448
[Close]
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: D8LK74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK74_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 9.190e-81
Identity = 135/212 (63.68%), Postives = 154/212 (72.64%), Query Frame = 3 
Query: 1632 KDYASEAGAPRACAGSRSRSGSRLXXXXXXXXXXXXDNQSLMKVSGGSFKCSRCLQRCGSIHERK--ITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRLNCEDKTGVPRDPSSAFQGPC 2261
            KDYASEA + R     R+RS SR                     S    +C+RCL+ C      K  I RTL M+YWVRTP CKAAKSKH++++D + YSREQFIEETVFTCPFTGA+R IVLERNMFPYDVPTDVEHWTLWSRKDL   EM+ FV+ W A+NHPHAVEWE DNNEG+RSIDWFHVHVFFRL CED+TGVPRDP+S + GPC
Sbjct:  246 KDYASEASSSR----KRNRSCSRERGSRGDSRGRSSRKTPTTAESRCGVECARCLEWCRPSRSPKTPIPRTLQMDYWVRTPNCKAAKSKHIDFIDDVAYSREQFIEETVFTCPFTGARRAIVLERNMFPYDVPTDVEHWTLWSRKDLPNDEMEAFVQGWAAENHPHAVEWECDNNEGERSIDWFHVHVFFRLGCEDRTGVPRDPASVYDGPC 453
[Close]
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A836CLJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ2_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.030e-39
Identity = 69/125 (55.20%), Postives = 88/125 (70.40%), Query Frame = 3 
Query: 1830 TRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRLN 2204
            T  +PME+WVR   CK  K++HL+++D    SREQFIE+TVFT P TG  R+ VLE NMFPY  P DVEHWTLWSR D+   E++ +V +W+  N PH   W YD+N GDRSI WFHVHV+ + +
Sbjct:  128 TMDMPMEFWVRGEECKRLKTEHLDFIDSHYSSREQFIEDTVFTDPMTGEVRDTVLEPNMFPYQTPPDVEHWTLWSRSDMTHEEIQAWVTEWLMVNKPHVRRWNYDDNAGDRSIYWFHVHVYIQYD 252
[Close]
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A6U1PGM4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PGM4_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.910e-28
Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 3 
Query: 1809 SIHERKITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRL 2201
            S +     RTL +EYW RT  C   K  H++++D    SRE FI ET          R+ +LE NMFPYD P D+ HWT+W R ++ + E+  +VE W+ K +P+ VEW YD+N G+RSID +HVHV+FR+
Sbjct:   57 SCNSNSPPRTLTIEYWDRTDDCINKKWDHMDFIDANFDSRENFILETALL------NRDHMLEPNMFPYDTPEDILHWTMWCRWEMSEEELIKYVENWMKK-YPYIVEWNYDDNAGERSIDLYHVHVYFRV 180
[Close]
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: D0MWK7_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MWK7_PHYIT)

HSP 1 Score: 120 bits (300), Expect = 4.510e-26
Identity = 61/133 (45.86%), Postives = 78/133 (58.65%), Query Frame = 3 
Query: 1803 CGSIHERKITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRL 2201
            C S   R+  RTL +EYW RT  CK  K  HL+ + +   S E+ I    F     G  R   LE NMFPYD P  +EHWTLW  KDL+  ++K +VE W+  N PH   W YD+N  +RSID FHVHV+F++
Sbjct:  172 CSSESTRRSRRTLYIEYWSRTDECKERKWDHLDEIAENYGSAEEHI----FATTLKG--RTAFLEPNMFPYDTPAGIEHWTLWHVKDLNHEQVKKYVENWIDANAPHVARWNYDDNP-ERSIDIFHVHVYFQV 297
[Close]
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A3M6VCZ3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCZ3_9STRA)

HSP 1 Score: 113 bits (283), Expect = 5.460e-26
Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = 3 
Query: 1833 RTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFR 2198
            RTL +EYW RT  C   K  H++ +D+M  SRE+ I  T      T   +E VLE NMFPYD P  + HWTLWSR +++ +E+++FV  W+ +N P    W YD N   RSID FHVHV+ +
Sbjct:    2 RTLVVEYWDRTDECLERKWAHMDMVDRMFNSREELILAT------TLHHKETVLEPNMFPYDTPKGISHWTLWSRHEMNHTEIEEFVCNWIRENAPQVERWNYDENLS-RSIDIFHVHVYLK 116
[Close]
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: W2K7Z7_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2K7Z7_PHYPR)

HSP 1 Score: 119 bits (299), Expect = 6.110e-26
Identity = 61/133 (45.86%), Postives = 78/133 (58.65%), Query Frame = 3 
Query: 1803 CGSIHERKITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRL 2201
            C S   R+  RTL +EYW RT  CK  K  HL+ + +   S E+ I    F     G  R   LE NMFPYD P  +EHWTLW  KDL+  ++K +VE W+  N PH   W YD+N  +RSID FHVHV+F++
Sbjct:  172 CSSESPRRSRRTLYIEYWSRTDECKERKWDHLDEIAENFGSAEEHI----FATTLKG--RTAFLEPNMFPYDTPAGIEHWTLWHVKDLNHEQVKQYVENWIDANAPHVERWNYDDNP-ERSIDIFHVHVYFQV 297
[Close]
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A6A3KAU7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KAU7_9STRA)

HSP 1 Score: 115 bits (288), Expect = 6.970e-26
Identity = 56/123 (45.53%), Postives = 76/123 (61.79%), Query Frame = 3 
Query: 1830 TRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFR 2198
            TRTL ++YW RT  C   K  H++ +D +  SRE+ I  T      T +  E  LE NMFPYD P  +EHWTLWSR ++D +E++++V  W+ +N PH   W YD N   RSID FHVHV+ +
Sbjct:   58 TRTLALQYWDRTDECLERKWAHMDMVDDLFESREELILAT------TLSHTETALEPNMFPYDTPDGIEHWTLWSRHEMDNAEIEEYVCDWLRENAPHVERWNYDENLS-RSIDIFHVHVYLQ 173
[Close]
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: H3GM77_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GM77_PHYRM)

HSP 1 Score: 116 bits (291), Expect = 1.060e-25
Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 3 
Query: 1821 RKITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRL 2201
            R+  RTL +EYW RT  CK  K  HL+ + +   S E+ I    F     G  R   LE NMFPYD P  +EHWTLW  KDL+  ++K +VE W+  N PH   W YD+N  +RSID FHVHV+F++
Sbjct:   95 RRSLRTLYVEYWSRTDECKERKWDHLDEIAENYGSAEEHI----FATTLKG--RTAFLEPNMFPYDTPAGIEHWTLWHVKDLNHEQVKQYVENWIDANAPHVQRWNYDDNP-ERSIDIFHVHVYFQV 214
[Close]
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Match: A0A2D4C5Q1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5Q1_PYTIN)

HSP 1 Score: 114 bits (284), Expect = 1.370e-25
Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = 3 
Query: 1815 HERKITRTLPMEYWVRTPACKAAKSKHLEYMDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWSRKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRL 2201
            ++R   RTL +EYW RT  CK  K  HL+ +     S E+ I    F     G  R   LE NMFPYD P  +EHWTLW   +L+  ++K +VE W+  N PH + W YD+N  +RSID FHVHV+F++
Sbjct:   22 YKRHSRRTLYIEYWSRTDECKERKWDHLDDIADKYGSAEEHI----FATTLNG--RTAFLEPNMFPYDTPAGIEHWTLWHVNELNHEQIKQYVENWIDANAPHVLRWNYDDNP-ERSIDIFHVHVYFQV 143
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig107.668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVR4_9PHAE5.160e-8464.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK74_ECTSI9.190e-8163.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CLJ2_9STRA4.030e-3955.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1PGM4_9STRA4.910e-2845.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D0MWK7_PHYIT4.510e-2645.86Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A3M6VCZ3_9STRA5.460e-2645.90Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
W2K7Z7_PHYPR6.110e-2645.86Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A6A3KAU7_9STRA6.970e-2645.53Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
H3GM77_PHYRM1.060e-2546.46Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A2D4C5Q1_PYTIN1.370e-2544.19Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig107contigF-serratus_M_contig107:103791..106750 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score274.2
Seed ortholog evalue4.6e-71
Seed eggNOG ortholog2880.D8LK74
Hectar predicted targeting categoryother localisation
EggNOG OGs2DZE1@1,2S6YE@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size2387
Cds size591
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig107.668.1prot_F-serratus_M_contig107.668.1Fucus serratus malepolypeptideF-serratus_M_contig107 103833..104996 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928912.3066745-UTR-F-serratus_M_contig107:103790..1038321622928912.3066745-UTR-F-serratus_M_contig107:103790..103832Fucus serratus maleUTRF-serratus_M_contig107 103791..103832 -
1690962626.0026734-UTR-F-serratus_M_contig107:103790..1038321690962626.0026734-UTR-F-serratus_M_contig107:103790..103832Fucus serratus maleUTRF-serratus_M_contig107 103791..103832 -
1622928912.3537889-UTR-F-serratus_M_contig107:104996..1067501622928912.3537889-UTR-F-serratus_M_contig107:104996..106750Fucus serratus maleUTRF-serratus_M_contig107 104997..106750 -
1690962626.0422444-UTR-F-serratus_M_contig107:104996..1067501690962626.0422444-UTR-F-serratus_M_contig107:104996..106750Fucus serratus maleUTRF-serratus_M_contig107 104997..106750 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928912.3239357-CDS-F-serratus_M_contig107:103832..1042431622928912.3239357-CDS-F-serratus_M_contig107:103832..104243Fucus serratus maleCDSF-serratus_M_contig107 103833..104243 -
1690962626.013125-CDS-F-serratus_M_contig107:103832..1042431690962626.013125-CDS-F-serratus_M_contig107:103832..104243Fucus serratus maleCDSF-serratus_M_contig107 103833..104243 -
1622928912.3336456-CDS-F-serratus_M_contig107:104496..1045861622928912.3336456-CDS-F-serratus_M_contig107:104496..104586Fucus serratus maleCDSF-serratus_M_contig107 104497..104586 -
1690962626.0226018-CDS-F-serratus_M_contig107:104496..1045861690962626.0226018-CDS-F-serratus_M_contig107:104496..104586Fucus serratus maleCDSF-serratus_M_contig107 104497..104586 -
1622928912.3437772-CDS-F-serratus_M_contig107:104906..1049961622928912.3437772-CDS-F-serratus_M_contig107:104906..104996Fucus serratus maleCDSF-serratus_M_contig107 104907..104996 -
1690962626.0328524-CDS-F-serratus_M_contig107:104906..1049961690962626.0328524-CDS-F-serratus_M_contig107:104906..104996Fucus serratus maleCDSF-serratus_M_contig107 104907..104996 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig107.668.1

>prot_F-serratus_M_contig107.668.1 ID=prot_F-serratus_M_contig107.668.1|Name=mRNA_F-serratus_M_contig107.668.1|organism=Fucus serratus male|type=polypeptide|length=197bp
MKVSGGSFKCSRCLQRCGSIHERKITRTLPMEYWVRTPACKAAKSKHLEY
MDKMTYSREQFIEETVFTCPFTGAQREIVLERNMFPYDVPTDVEHWTLWS
RKDLDQSEMKDFVEKWVAKNHPHAVEWEYDNNEGDRSIDWFHVHVFFRLN
CEDKTGVPRDPSSAFQGPCRTSTETTSGEDSSDEELVDGVAVMNVK*
back to top

mRNA from alignment at F-serratus_M_contig107:103791..106750-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig107.668.1 ID=mRNA_F-serratus_M_contig107.668.1|Name=mRNA_F-serratus_M_contig107.668.1|organism=Fucus serratus male|type=mRNA|length=2960bp|location=Sequence derived from alignment at F-serratus_M_contig107:103791..106750- (Fucus serratus male)
TTCACCTCGGGCGTCAACCGAGAGAGCAATATGGCTGCCGTCAGCTGCGA
CAAACAGGTTTCGGATGTCCTTTTCGAAAGGTGAGTTCATCCTTCGTACG
ATTTCTGAGTCAGGTCGAGGTCTACGGTATTACCAAATCATCACCATATT
CATTCTAAAGCTCAGGAGTAGCTCAAGATGGGCCACAAGATAATCGCATG
TAGAGCTCAGGCCACGTAGACGCCGCCGCCCACCGCCCTCGCATATGACG
CTCTAGGCCCCCGCAACTGTTGTTGCTCTTGTTTTGTGCGTTTGTCTTGT
TTTTTTTTGTTTTGTGTGTTTTTTTTGTTTTGTCTCTTGTCGTTCCCTGC
TCTTTCCTTCTAGAAAAACGTCTCGAAACAAGTCAGGGCGAAAAAGCAGA
TGATGCGCATTCTACCGAGTTCGCGCCCGTCGCGGCTGCTTCATGCCAGT
GGCCACGTCCCTTCGCCGCTGCCTCGAGGCTGCCCTCTTCTTCGAGAGCG
AAGGCCCACCAGTTTGATCGTATGTCCCGCAAACAAATGAGTGATTGACC
TAGATGGTTATGTAGAAGTGCATAGCTTTACTCGAAACCAATCTCAACCT
CGCTACTGACTTTTTACATGTTGGAAACACTGTAGGGGCTTGAATTACTT
GAACCAAAAGTTGAGGAATGGAGCCGTTTTTTTACCGGATAGCTCAACGG
CTCTACCCTCGAATTCAGTTATACTTTCCGCCCGGTCCTGTGCGGAACAC
AAACGTATATATATACGTGGAATGAGTGACGTAGCCCTGTTTGCTGTGAA
CTGCTTACAGCAGTAACACAAACGAGCGTTACCTGCACGTGGTGGTACTC
GTTCTTCCAAATTGTTGTAATACGCTTCTAAACCTGACCTCTCGGGTCAC
CATTACAACGGAAGTAGAGTTCCGCACTTCATCATATAAGGTCCGCCTAT
TATAGGGACCAATTTTTTTTTTCAGAAACAGTCGGGGTGTTAGGCTTACC
TGCTCATCACTAATCTGCGCCGACCTTCCCCTGCGTCCCCTCGGTCCTAC
TCCCAATTCAGATTCTCGCACAAACGCGCTCGCAAAGACGTCAGCTGCTG
GGAGGCAGGAACAGCAAACGATGGTTGTGAAAATCCACCGCCTCCGTCGA
GGGTCGCAGTGTCTCCGCTGTCAGAGAGCTCCAAAGCCCGTCTGACGCCA
TCTCCAAGTTTGCCACCTGTTCCCGAGCCCCCACACCTGATGAAAACCAG
CAGTCGCCCCCTTCCGTCGACGGATTCGGCCCAGGCAAAGCAAGCGGTAT
TTCGCCTACTCTGCGCTCGACGCAGAGGGGACCGCGGGCTCCCTCCCCGA
CGCCCTCTTCGACATCTACCTTTTCTGCCGCCACTACATCGGCCACCTTC
TCCACGCGATCTTCGCTCTCCTCTTCCCGATCCTCCGCCTCGCAACACCG
GAAGTCGCGACGTGGCAGTGATGCACGGTTACCGTCGACACGATCGTTCT
CCCGCCCTTGTTCCGCGGCAAAAAGTGATCGCTTCCTTCTGCCAGCGTCA
AGAGACGCGCGCGGGCGGCGCTGGCGAAGGTACGGCAGCGACCGCGGTGG
TGGGCGCGAGTATCCTCGACGATGGTCGGGGAAAGACTACGCCAGCGAAG
CAGGCGCCCCAAGGGCATGTGCAGGGAGTCGGAGCAGAAGCGGAAGTCGT
CTCTCTACGAGGGGAAAGAGAAGTCGGAGCGGCAGCAGGGACAACCAGTC
ACTGATGAAGGTCTCCGGGGGAAGTTTCAAGTGCTCCAGGTGCTTGCAGC
GGTGCGGTTCCATCCACGAACGCAAGATAACCCGAACCCTTCCGGTAAGA
TTTGGCATCTGCAGCAGCACGTGGCTAGCGTGTTTGTTTTGTCACCTGAC
AAATCTTGAAAACGATCTACTAAAGTAGTTCCCTCTTAATGTCATACATT
TCTGGGATACTAAAAAAATGGAAAAAGTGTTGCCCTTGGTTTAAAAGCAA
ATTTCGCCCTTATCCTGGGAGGCGTGTGCGAAATTAAATACGAAGTAATA
TGCTCCCGGACACGTGTGACGCCATTCCTCTGTACTTTGCAAATTTTAGC
ATAACGCCATCCACTAATTAAAACCCGCTTCCATGTTTCGGCAAAAAAAT
GAACGTGTCCGCAGATGGAGTACTGGGTTCGCACCCCGGCCTGTAAGGCG
GCCAAATCAAAGCACTTGGAGTACATGGACAAGATGACCTACTCCAGAGA
ACAGGTCCGTTTCATATATTAATGTCACTTGTGAAAAAAATGATAGGTTA
CAATATTTTTCCCGTTGATCCTGTTTGGCTAGAAAGAGGGGGGGGCACCG
TGTCCATCACCTTGATGTAATAACTCCGCCGTTAACGTTAGTTTGCGCCC
TGAGGTTTAGTTACTAATATTGTATCACTCTGCAGAGCCCCCACGACAAT
AATTTGTCCAAGCCTATGATGCCAAACTATTCCCTCTTGACGTTTCATTC
CTCGCAGTTCATCGAAGAGACGGTCTTCACCTGCCCTTTCACCGGAGCTC
AGCGTGAGATTGTACTCGAGCGAAACATGTTTCCCTATGACGTACCCACC
GACGTCGAGCACTGGACGCTATGGAGCCGAAAGGATCTCGACCAATCCGA
GATGAAGGACTTCGTAGAGAAGTGGGTGGCGAAAAATCATCCTCACGCGG
TAGAGTGGGAGTACGACAACAACGAAGGCGACCGCTCCATCGATTGGTTC
CACGTGCACGTTTTCTTCCGGCTTAACTGCGAAGACAAGACTGGCGTTCC
ACGGGACCCATCATCCGCGTTCCAAGGCCCTTGCAGAACGTCCACTGAAA
CTACGAGCGGTGAAGACTCGAGCGACGAAGAATTAGTTGACGGTGTTGCT
GTGATGAACGTCAAATAGCATACATTGGCGACATTTATACGCCCAGGCTA
ACAGACGCCG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig107:103791..106750-

>mRNA_F-serratus_M_contig107.668.1 ID=mRNA_F-serratus_M_contig107.668.1|Name=mRNA_F-serratus_M_contig107.668.1|organism=Fucus serratus male|type=CDS|length=1182bp|location=Sequence derived from alignment at F-serratus_M_contig107:103791..106750- (Fucus serratus male)
ATGAAGGTCTCCGGGGGAAGTTTCAAGTGCTCCAGGTGCTTGCAGCGGTG
CGGTTCCATCCACGAACGCAAGATAACCCGAACCCTTCCGATGAAGGTCT
CCGGGGGAAGTTTCAAGTGCTCCAGGTGCTTGCAGCGGTGCGGTTCCATC
CACGAACGCAAGATAACCCGAACCCTTCCGATGGAGTACTGGGTTCGCAC
CCCGGCCTGTAAGGCGGCCAAATCAAAGCACTTGGAGTACATGGACAAGA
TGACCTACTCCAGAGAACAGATGGAGTACTGGGTTCGCACCCCGGCCTGT
AAGGCGGCCAAATCAAAGCACTTGGAGTACATGGACAAGATGACCTACTC
CAGAGAACAGTTCATCGAAGAGACGGTCTTCACCTGCCCTTTCACCGGAG
CTCAGCGTGAGATTGTACTCGAGCGAAACATGTTTCCCTATGACGTACCC
ACCGACGTCGAGCACTGGACGCTATGGAGCCGAAAGGATCTCGACCAATC
CGAGATGAAGGACTTCGTAGAGAAGTGGGTGGCGAAAAATCATCCTCACG
CGGTAGAGTGGGAGTACGACAACAACGAAGGCGACCGCTCCATCGATTGG
TTCCACGTGCACGTTTTCTTCCGGCTTAACTGCGAAGACAAGACTGGCGT
TCCACGGGACCCATCATCCGCGTTCCAAGGCCCTTGCAGAACGTCCACTG
AAACTACGAGCGGTGAAGACTCGAGCGACGAAGAATTAGTTGACGGTGTT
GCTGTGATGAACGTCAAATAGTTCATCGAAGAGACGGTCTTCACCTGCCC
TTTCACCGGAGCTCAGCGTGAGATTGTACTCGAGCGAAACATGTTTCCCT
ATGACGTACCCACCGACGTCGAGCACTGGACGCTATGGAGCCGAAAGGAT
CTCGACCAATCCGAGATGAAGGACTTCGTAGAGAAGTGGGTGGCGAAAAA
TCATCCTCACGCGGTAGAGTGGGAGTACGACAACAACGAAGGCGACCGCT
CCATCGATTGGTTCCACGTGCACGTTTTCTTCCGGCTTAACTGCGAAGAC
AAGACTGGCGTTCCACGGGACCCATCATCCGCGTTCCAAGGCCCTTGCAG
AACGTCCACTGAAACTACGAGCGGTGAAGACTCGAGCGACGAAGAATTAG
TTGACGGTGTTGCTGTGATGAACGTCAAATAG
back to top