mRNA_F-serratus_M_contig106.598.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig106.598.1
Unique NamemRNA_F-serratus_M_contig106.598.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 235 bits (600), Expect = 3.540e-68
Identity = 159/470 (33.83%), Postives = 244/470 (51.91%), Query Frame = 1
Query:   16 WEVVPRPKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLYL-GCHITRDHDAGTLKFDQHHYVRTMASKFSVEET-STTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVE---GFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410
            W  V R     V+ TK +F +K  ++G I ++K R VA GF Q+  +   E+ +   S  SI + L +  A  + L  LDV  A+L A++KE++YIE PE  +   D+V +L KA+YGL  AG    KT    L   GF+ C +D C++     G+   I +  VDD++V   T+   ++    +   F IK+LG   +L G  I  D     L  +Q HYV+T+  +F+ +     T+       LSK D P+ + +  EM   PYR  +G L + A  TRPD A+A   L +  + PG  HW AA R L+    T+D GI+YGG     T +  + DA++ T  D RR VSG  +M+ GG   + +K Q   +++S ++E + L+    E+ ++R +    G     PI      + E+N+GAI +A N     RT+H+ ++HH VRD V    ++  YV+T  Q AD
Sbjct:   26 WTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRAGGDTTYICLY-VDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPV-VFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQ-----VWEDNQGAIALAHNAGYHARTKHIDIRHHYVRDLVADSVIKLSYVETQRQLAD 488          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A438HUL4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HUL4_VITVI)

HSP 1 Score: 235 bits (599), Expect = 8.760e-68
Identity = 159/478 (33.26%), Postives = 254/478 (53.14%), Query Frame = 1
Query:   13 VWEVVPRPKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQ--VGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLG-AGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDD------APQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNI---IIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410
            VW++V  PKG   +G K IF+ K    G I +YK R VA+GF Q + I   E+ SP  S+ S  +++ + A  D EL  +DV  A+L  N+ E +Y+  PE++ ++  +  V RL++++YGL  A     + +   + + GF++   D C++ +   G+  +I+V+ VDD+L+AS       + +  L   F +KDLG A   LG  I RD   G L   Q  Y+  + S+F +      + A G+ P++K D       P+ E E ++M   PY  AVG LM+    TRPD AY    LG+    PG+ HW+ AKR ++   RTKD  +TY  +  S  ++ A+ D++FA C D+RR  SG   ML GGA SW S  Q + + ++ ++E +   E  N   +LR    F+T   I D I   + I  +N+ A   + N  +S +++H+ +K  +V++ V+S  V   ++ T    AD
Sbjct:   38 VWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLK-FSGSKFIILVLYVDDILLASSDVGLLHETMRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMS-----NYAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYRRS--SHLEIVAYSDSDFAGCLDSRRSTSGCIFMLAGGAVSWKSVKQTLVASSTMEAEFIACYEASNHGIWLR---NFVTQLRIVDGIEKPLRINCDNKAAELYSKNNRSSSKSKHIDIKFLVVKERVQSLQVSIEHISTNSMIAD 504          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 1.010e-67
Identity = 159/485 (32.78%), Postives = 246/485 (50.72%), Query Frame = 1
Query:   34 PKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLYL-GCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRH-------------------------VGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410
            P+G+  + +K  F  K  K G+I+ +K R VA+GF QI ++    SSSP PS ASI ++L +   K   L   DV  AY  A + EE++++LP    +   ++ + ++A+YGL  +G       +  L   GFEQC+ADPCVFR+++   VV+I+V+ VDD+LVA  +  D E+ +  L   FP K+LG   +  GC I RD +AGTL+  Q  Y+ +M  ++                                   P REA+G ++W +T +RPD ++A   + +    P   HW A ++ L     T+D+GITY    GS   L+ +VDA++A   D RR V+G A  +GG   S  SK Q + S++S ++E +   E V E  F+R V  F+ P     +I ++ E+N+GAI +  N  +S RT+H                         + V+ H +   + SG +   +V T EQHAD
Sbjct:  576 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMGEEW-----------------------------------PAREAIGSMVWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVAGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVL-EDNQGAIALVQNPLSSGRTKHRREISFHRRIEFXVFVFDGSRVARNIDVRFHFIGGLIRSGDISVKFVPTTEQHAD 1020          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: W8BNV5_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BNV5_CERCA)

HSP 1 Score: 236 bits (601), Expect = 2.740e-67
Identity = 158/486 (32.51%), Postives = 248/486 (51.03%), Query Frame = 1
Query:    1 LARQVWEVVPRPKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQ----------VGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGA-GLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEK-PLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNEL----RFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410
            +A   WE+V RP GK ++ +K   R K  +NG IEK K R VA+GF Q   I   E+ +P     +I +++ I+A    E+  LD V AYL   ++ E+Y++LP D  +  D+          V  L+KA+YGL  +G L  +   T+L+  G    ++DPC++      N ++++ + VDDL+VA   K+   +  ++L   F +KDLG   L LG    +     T+   Q  YV  + ++F + +    S  A     L K+  P+TE E       PY+  VG LM+ A  TRPD A+    L + N   G  HW AAKR L+    T ++GI++         L  + DA++ +  D RR  +G A  L   A SW S+ Q+  +++S +SE + L++   E     R LR++ G       +D  I I  +N+GA K++ N     RT+HV ++HH VR+AV+   ++  Y+ T E  AD
Sbjct:  117 IANNTWEIVDRPIGKKIVESKWALRTKYNQNGNIEKRKARLVAKGFTQRAGIDYSETFAPVARLNTIRLLMAISAEMGLEIHQLDFVSAYLNGTIETEIYMKLPTDLFSILDEEEASQYTEDKVCLLKKAIYGLKQSGRLWYQKLHTKLSNMGMSASKSDPCLYTY-NNNNTIILIAIYVDDLIVACNDKQKLSRIKDELASSFEMKDLGPIKLCLGIEFNQCLKTNTITMCQSRYVAEILNRFQMNDCKPVSTPANTSIKLCKEMCPKTEEEKLSASKLPYQNLVGSLMYLAVSTRPDIAHIVSVLSQFNTNYGNQHWVAAKRVLRYLKGTPNLGISFTRTRNF--SLEGFADADWGSNIDDRRSYTGFAFTLANAAISWESRKQRTVAISSTESEYMSLSDSTKEAIYLKRLLREIIG-------EDRTITIYNDNQGAGKLSKNPIFHNRTKHVDIRHHFVREAVDRKDIKVEYISTEEMPAD 592          
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A1Y1MYL8_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MYL8_PHOPY)

HSP 1 Score: 240 bits (613), Expect = 4.740e-66
Identity = 152/465 (32.69%), Postives = 247/465 (53.12%), Query Frame = 1
Query:   16 WEVVPRPKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410
            WE+VP+P GK ++ +K +F+ K    G I +YK R  A+GF QI+ +  +E+ SPT    SI  +L I A +D+E+   DV  A+L  ++ EE+Y+  P         V +L+K++YGL  A    +K +   L   G +QC  D CV++    G  V++++  VDD L+  E K      ++ L+  F I       ++G  I+RD  + ++   Q +YV+ +  +F++E+   +S  A    +       +E   +     PYREAVG L++ AT++RPD AYA   + +  ++  LAHW A KR ++    T D GI Y     +  KL  + DA+FA   DTRR  SG   ML GGA +W S+ Q+  S+++ ++E V  A    EL +LR     +    +DD   +  +N + A+++  N    +RT+H+ VK H +R+  E G +   YV++ +Q AD
Sbjct:  811 WELVPKPVGKNIIDSKWVFKVKRTSQGEICRYKARLCARGFTQIRGLDYEETFSPTTRYDSIRTLLSIAAERDYEMVQFDVTTAFLNGDLVEEIYMTPPTGANIDPTLVCKLKKSLYGLKQASRCWNKKFDDSLKKFGLQQCNGDKCVYKGEFNGAKVLLILF-VDDGLIIGENKSILSVILDKLKVKFNIVINEPNYFVGLEISRDRASKSICVSQRNYVKQLVKRFNLEDAKCSSVPADPHAMM-----SSEIGHQVQNNIPYREAVGALIYIATVSRPDIAYAVGVVSRYLNSYSLAHWNAVKRIIRYLKGTMDDGIEYKPTSHN-RKLVGFSDADFAGDHDTRRSTSGYISMLHGGAITWSSQRQQTVSLSTTEAEYVAAANASKELMWLRSFLREIHEDVVDDATKLFVDN-QSAVRLVQNAEFHKRTKHIDVKFHFIREQQERGEIDVTYVESDKQLAD 1267          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1CTN1_PYTOL3.540e-6833.83Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
A0A438HUL4_VITVI8.760e-6833.26Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JTV6_9PHAE1.010e-6732.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
W8BNV5_CERCA2.740e-6732.51Retrovirus-related Pol polyprotein from transposon... [more]
A0A1Y1MYL8_PHOPY4.740e-6632.69Uncharacterized protein n=2 Tax=Photinus pyralis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig106contigF-serratus_M_contig106:681630..683039 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score85.5
Seed ortholog evalue1.9e-14
Seed eggNOG ortholog67593.Physo131457
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size1410
Cds size378
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig106.598.1prot_F-serratus_M_contig106.598.1Fucus serratus malepolypeptideF-serratus_M_contig106 681978..682355 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928894.3350275-UTR-F-serratus_M_contig106:681629..6819771622928894.3350275-UTR-F-serratus_M_contig106:681629..681977Fucus serratus maleUTRF-serratus_M_contig106 681630..681977 -
1690962619.25057-UTR-F-serratus_M_contig106:681629..6819771690962619.25057-UTR-F-serratus_M_contig106:681629..681977Fucus serratus maleUTRF-serratus_M_contig106 681630..681977 -
1622928894.3626354-UTR-F-serratus_M_contig106:682355..6830391622928894.3626354-UTR-F-serratus_M_contig106:682355..683039Fucus serratus maleUTRF-serratus_M_contig106 682356..683039 -
1690962619.2840898-UTR-F-serratus_M_contig106:682355..6830391690962619.2840898-UTR-F-serratus_M_contig106:682355..683039Fucus serratus maleUTRF-serratus_M_contig106 682356..683039 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928894.3488896-CDS-F-serratus_M_contig106:681977..6823551622928894.3488896-CDS-F-serratus_M_contig106:681977..682355Fucus serratus maleCDSF-serratus_M_contig106 681978..682355 -
1690962619.2737155-CDS-F-serratus_M_contig106:681977..6823551690962619.2737155-CDS-F-serratus_M_contig106:681977..682355Fucus serratus maleCDSF-serratus_M_contig106 681978..682355 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig106.598.1

>prot_F-serratus_M_contig106.598.1 ID=prot_F-serratus_M_contig106.598.1|Name=mRNA_F-serratus_M_contig106.598.1|organism=Fucus serratus male|type=polypeptide|length=126bp
MASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLM
WTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYG
GAPGSCTKLSAWVDANFATCPDTRR*
back to top

mRNA from alignment at F-serratus_M_contig106:681630..683039-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig106.598.1 ID=mRNA_F-serratus_M_contig106.598.1|Name=mRNA_F-serratus_M_contig106.598.1|organism=Fucus serratus male|type=mRNA|length=1410bp|location=Sequence derived from alignment at F-serratus_M_contig106:681630..683039- (Fucus serratus male)
CTCGCGCGCCAGGTGTGGGAGGTAGTTCCCCGTCCCAAAGGGAAGACGGT GCTTGGCACCAAAACCATCTTCAGAAGAAAAATCGGAAAGAACGGGCGAA TAGAAAAATACAAGTGTAGATTCGTGGCTCAGGGATTCCGACAAATCAAA AGTATCCACTAGGATGAGTCATCATCGCCCACACCATCGCAGGCTAGCAT AATGATGGTGCTCGGCATCACAGCGGCGAAAGACTGGGAACTCCGTCCAC TCGACGTCGTCATGGCGTACCTGGAGGCGAACGTAAAAGAAGAACTGTAC ATCGAGCTACCTGAAGACTACCGCAACTCCTGCGACCAGGTGGGACGACT GCAAAAGGCAATGTACGGCCTTGTGCACGCCGGATTATTATGATCAAAAA CATACAGCACCGAACTCGCCGCTAAGGGGTTCGAGCAATGTCAGGCCGAC CCATGCGTGTTCAGGCGAGTACTGCGCGGGAACGTTGTCGTCATCGTCGT GGTATAAGTCGACGACCTGCTGGTGGCGAGTGAAACGAAGCGCGACGAGG AGCAGGCAATAAATGACCTCCGATTCTGTTTCCCAATCAAGGACTTAGGG GCCGGATTATATCTCGGATGCCACATCACGCGGGATCACGACGCGGGGAC GCTGAAATTCGACCAACACCACTACGTACGGACCATGGCTTCAAAATTCA GCGTCGAGGAGACCAGCACCACGTCGGCGGCAGCGGGAGAAAAACCCCTG TCCAAGGACGATGCCCCACAGACCGAGGCGGAGACGGAAGAAATGCGTGT CACCCCTTACAGGGAGGCGGTAGGGGTCCTCATGTGGACTGCAACCATGA CCCGCCCTGATGCCGCGTACGCTGCTCATCAGCTAGGAAAAATTAACGAC ACCCCGGGACTAGCACACTGGAGGGCGGCGAAAAGGCCACTACAATGCCC GTGGCGTACGAAGGACGTTGGGATCACCTACGGCGGAGCGCCGGGGTCGT GCACAAAACTGTCGGCATGGGTGGACGCAAATTTCGCCACTTGCCCAGAC ACTCGGCGTTAGGTTTCAGGCGGAGCAGTGATGCTGGGAGGGGGCGCGAC CAGTTGGTTCTCGAAGATGCAGAAGGTAACCTCGGTCGCGTCACCCAAAT CAGAGTGTGTGGTGCTGGCAGAAGTTGTAAATGAGCTCCGTTTCCTTCGA CAGGTAGAGGGCTTCTTGACGCCGCCGCCGATCGACGACAACATCATCAT TATTAGGGAAAATAACGAAGGAGCTATCAAGATGGCGACCAACCGTTTCA ACAGCAGGCGTACGAGGCACGTGGGCGTGAAACACCACATCGTCCGCGAT GCGGTAGAGAGTGGTACAGTTCGAACCCATTACGTCAAGACGGGGGAGCA ACATGCCGAT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig106:681630..683039-

>mRNA_F-serratus_M_contig106.598.1 ID=mRNA_F-serratus_M_contig106.598.1|Name=mRNA_F-serratus_M_contig106.598.1|organism=Fucus serratus male|type=CDS|length=756bp|location=Sequence derived from alignment at F-serratus_M_contig106:681630..683039- (Fucus serratus male)
ATGGCTTCAAAATTCAGCGTCGAGGAGACCAGCACCACGTCGGCGGCAGC
GGGAGAAAAACCCCTGTCCAAGGACGATGCCCCACAGACCGAGGCGGAGA
CGGAAGAAATGCGTGTCACCCCTTACAGGGAGGCGGTAGGGGTCCTCATG
TGGACTGCAACCATGACCCGCCCTGATGCCGCGTACGCTGCTCATCAGCT
AGGAAAAATTAACGACACCCCGGGACTAGCACACTGGAGGGCGGCGAAAA
GGCCACTACAATGCCCGTGGCGTACGAAGGACGTTGGGATCACCTACGGC
GGAGCGCCGGGGTCGTGCACAAAACTGTCGGCATGGGTGGACGCAAATTT
CGCCACTTGCCCAGACACTCGGCGTTAGATGGCTTCAAAATTCAGCGTCG
AGGAGACCAGCACCACGTCGGCGGCAGCGGGAGAAAAACCCCTGTCCAAG
GACGATGCCCCACAGACCGAGGCGGAGACGGAAGAAATGCGTGTCACCCC
TTACAGGGAGGCGGTAGGGGTCCTCATGTGGACTGCAACCATGACCCGCC
CTGATGCCGCGTACGCTGCTCATCAGCTAGGAAAAATTAACGACACCCCG
GGACTAGCACACTGGAGGGCGGCGAAAAGGCCACTACAATGCCCGTGGCG
TACGAAGGACGTTGGGATCACCTACGGCGGAGCGCCGGGGTCGTGCACAA
AACTGTCGGCATGGGTGGACGCAAATTTCGCCACTTGCCCAGACACTCGG
CGTTAG
back to top