mRNA_F-serratus_M_contig106.598.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 261 bits (668), Expect = 1.580e-73 Identity = 160/461 (34.71%), Postives = 246/461 (53.36%), Query Frame = 1 Query: 34 PKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLG-AGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAG-EKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 P+G+ + TK +F K + G I +K R VA+GF Q+ SSS P+ +SI + + R D+ AY A ++EELY+ + + +V ++++A+YGL +G + L G+EQC+ADPCVFR+++ G VV I+V+ VDD++ + EE + LR P+KDLG Y GC I RD + GT Q Y+ + +F + T++T A E +DD P + P R+A+G LMW AT TRPD A A + + + P + W+A + L T D+GITY GS L +VDA++A RR V+G AV +GG S SK Q++ S+++ ++E + E V E F+R V F+ P I ++ E+N+GAI + N F+S R++H+ V+ H +R+ +SG + Y+ T EQHAD Sbjct: 775 PEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDK--------PVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITY--VRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVL-EDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHAD 1223
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5K1G1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G1_9PHAE) HSP 1 Score: 250 bits (639), Expect = 1.710e-73 Identity = 167/461 (36.23%), Postives = 247/461 (53.58%), Query Frame = 1 Query: 34 PKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLG-AGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAA-GEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 P+G+ +G K +F K + G I K R VA+ F QI I SSS PS ASI V+ + K +L DV AY+ A +KEE Y+ PE + +V ++++A+YGL +G + L +EQC+ DPCVFR+V+ G VV ++V+ VDD+LVA++ + + E+ L FP+KDLG Y GC I D + G K Q Y+ +M +F V T+ T AA + ++DD P + P REA+G LMWT +TRPD A ++L KI +P W A R + TKD GIT+ GS LS + + + RR +G AV +GG +K Q VT+ ++ ++E + E V E F+R V F+ P I ++ E+N+GA+ + N F+S R++H+ V+ H +R+ +SG + YV TGEQHAD Sbjct: 55 PEGRKAIGLKWVFSWKTNEKGLIVDNKARMVARVFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAMLKEETYLRFPEGCGSISGKVVKVERALYGLKQSGREWGFEAADALIESEYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAAD-EGEREELFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPTRDDKPAVDK--------PVREAIGCLMWTK-LTRPDIALPLNKLHKIAHSPTWRKWNALVRIMSYLNFTKDFGITF--VRGSGLDLSVFAEVD-------RRSTAGLAVTVGGTVVCASTKTQPVTAQSTSEAEYMAAGEGVKEALFVRGVLSFIAPETSGAKIKVL-EDNKGALALIENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHAD 495
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 261 bits (666), Expect = 5.670e-73 Identity = 161/464 (34.70%), Postives = 248/464 (53.45%), Query Frame = 1 Query: 34 PKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLG-AGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTT----SAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 P+G+ + TK +F K + G I +K R VA+GF Q+ SSS P+ +SI + + R D+ AY A ++EELY+ + + +V ++++A+YGL +G + L G+EQC+ADPCVFR+++ G VV I+V+ VDD++ + EE + LR P+KDLG Y GC I RD + GT Q Y+ + +F + T++T +A G K +DD P + P R+A+G LMW AT TRPD A A + + + P + W+A + L T D+GITY GS L +VDA++A RR V+G AV +GG S SK Q++ S+++ ++E + E V E F+R V F+ P I ++ E+N+GAI + N F+S R++H+ V+ H +R+ +SG + Y+ T EQHAD Sbjct: 1328 PEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPK---RDDEPGVDK--------PVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITY--VRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVL-EDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHAD 1776
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5K9E2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E2_9PHAE) HSP 1 Score: 257 bits (657), Expect = 1.590e-72 Identity = 163/465 (35.05%), Postives = 253/465 (54.41%), Query Frame = 1 Query: 19 EVVPRPKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLG-AGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 E+ P+G+ + K IF K + G I +K R VA+GF QI + SSS PS SI ++ ++ D+ AY A +KEE+Y+ LP+ + ++++A+YGL +G + L + G+EQC+ DPC+FR+V+ G VV ++V+ VDD+++ S T+ + E+ + L+ FP+KDLG Y GC I D + GT K Q Y+ +M ++F+V T+ T A + D P+ + E+ + P REA+G LMW TRPD A ++L KI +P W A R + TKD+GITY GS L +VD+++A RR +G AV +GG +K Q VT+ ++ ++E + E V E F+R V F+ P I +RE+NEGA+ + N F+S R++H+ V+ H +R+ ++G + YV T EQHAD Sbjct: 584 EISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGFSQIPGVDFHHSSSACPSAVSIKTMVAVSTENGRRPVHWDIKQAYTHAKLKEEIYLRLPDGCGVWTGKAVKVERALYGLKQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIML-SATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAYIESMLNRFNVTTTAPTPAVVDD-----DLGPKRDDESSVDK--PVREAIGCLMWLL-FTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITY--VRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPET-SGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHAD 1036
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5JRY9_9PHAE (CCHC-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY9_9PHAE) HSP 1 Score: 257 bits (657), Expect = 8.240e-72 Identity = 163/465 (35.05%), Postives = 253/465 (54.41%), Query Frame = 1 Query: 19 EVVPRPKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLG-AGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 E+ P+G+ + K IF K + G I +K R VA+GF QI + SSS PS SI ++ ++ D+ AY A +KEE+Y+ LP+ + ++++A+YGL +G + L + G+EQC+ DPC+FR+V+ G VV ++V+ VDD+++ S T+ + E+ + L+ FP+KDLG Y GC I D + GT K Q Y+ +M ++F+V T+ T A + D P+ + E+ + P REA+G LMW TRPD A ++L KI +P W A R + TKD+GITY GS L +VD+++A RR +G AV +GG +K Q VT+ ++ ++E + E V E F+R V F+ P I +RE+NEGA+ + N F+S R++H+ V+ H +R+ ++G + YV T EQHAD Sbjct: 1046 EISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGFSQIPGVDFHHSSSACPSAVSIKTMVAVSTENGRRPVHWDIKQAYTHAKLKEEIYLRLPDGCGVWTGKAVKVERALYGLKQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIML-SATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAYIESMLNRFNVTTTAPTPAVVDD-----DLGPKRDDESSVDK--PVREAIGCLMWLL-FTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITY--VRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPET-SGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHAD 1498
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5JRB0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB0_9PHAE) HSP 1 Score: 246 bits (628), Expect = 2.360e-71 Identity = 172/461 (37.31%), Postives = 248/461 (53.80%), Query Frame = 1 Query: 34 PKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVAS-ETKRDEEQAINDLRFCFPIKDLG-AGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 P+G+ +G+K + K + G I +K R VA+GF QI I SSS PS ASI V+ K +L DV AY+ A +KEE+Y+ PE + +V +++ A+YGL +G + L G+EQC DPCVFR+V+ G VV ++V+ VDD+LVA+ E +R+E A + +F P+KDLG Y GC I + G K Q Y+ +M +F V T+ T AA D P+ + E+ + P REA+G LMWT +TRPD A ++L KI +P W A R + TKD GIT+ GS LS +VD ++A RR +G AV +G +K Q TS A E + E V E F+R V F+ P I ++ E+N+GA+ + N F+S R++H+ V+ H++R+ +SG + YV TGEQHAD Sbjct: 147 PEGRKAIGSKWVLSWKTSEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAAATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVEHALYGLKQSGREWGFEAADALIENGYEQCGVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASPNKKF--PMKDLGECTWYDGCAIAMHVEYGITKLSQTAYIESMLKRFDVITTAFTPAA-----TDADLGPKRDDESAVDK--PMREAIGCLMWTK-LTRPDIALPLNKLQKIAHSPTGRIWDALVRIMSFVNFTKDFGITF--VRGSGLDLSVFVDTSYADNEVDRRSTTGLAVSVGSTVVCASTKTQPSTSEA----EYMAAREGVKEALFVRGVLSFIAPETSGAKIKVL-EDNKGALALIENPFSSSRSKHLDVRFHVIRELFKSGKITAEYVPTGEQHAD 590
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6A4CLK4_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CLK4_9STRA) HSP 1 Score: 242 bits (617), Expect = 1.360e-70 Identity = 162/469 (34.54%), Postives = 244/469 (52.03%), Query Frame = 1 Query: 16 WEVVPRPKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIM-MVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLG-AGLYLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTS--AAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 W +VPR +G + +F +K + GR+ +YK R VA+GF+Q I E+ SP + S + +VL + AA ++ + LD A+L + +K+ +Y+E+P N+ +L KA+YGL A +KT GF+ C AD CV+ + + N + V + VDD+++A++T + + L+ F +K+LG A LG I D AGTLK Y+ + F E AAG K LSK +P T+AE MR PYR +G L++ T TRPD A+ QL + + P HW AA R L+ T GI Y G + T L A+ DA++ T D RR SG VM G + SK Q+ +++S ++E + L+ V E+ + R + + + N I E+N+GAI + N RT+HV ++HH + VE GTV+ YV T Q AD Sbjct: 26 WTLVPRGTASRTIGCRWVFAKKRDQYGRVVRYKARLVAKGFKQKYGIDFFETYSPVANMNSTLRVVLSVCAAYEYRMEQLDADTAFLNSELKDRVYMEVPFGIENARGYQYQLNKAIYGLKQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSK-NGFIYVCLYVDDMIIAAKTSEEIRDVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKPTRYIDDVVEHFGQENAKPVDNPCAAGLK-LSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPEKQHWNAAVRVLRYLKSTLQHGIIYHGGTHTVT-LKAYSDADWGTSLDDRRSGSGVMVMTGNAPVVFKSKFQRTVALSSAEAEYMALSLCVQEVLWTRAMLTVMGT--LQRNATTIWEDNQGAIALVHNAGYHARTKHVDIRHHFTTENVERGTVKVEYVDTKNQLAD 489
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A6H5LGF7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGF7_9PHAE) HSP 1 Score: 249 bits (637), Expect = 4.060e-69 Identity = 159/455 (34.95%), Postives = 251/455 (55.16%), Query Frame = 1 Query: 52 LGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLYL-GCHITRDHDAG-TLKFDQHHYVRTMASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 + +K F K K+G+IEK+K R VA+GF QI ++ SSSP PS ASI ++L + K +L DV A+ A + E++++ LP +V + ++A+YGL +G + L GFEQC+ADPCVFR+ ++ +VV D ++ + + D ++ + L FP KDLG ++ GC + RD +AG TL+ Q Y+ + ++F V+ TS+ A+ G D P+ + E+ P REA+G +MW +T +RPD ++A + + P HW+A + L T+D+GITY GS L +VDA++A D RR VSG A +GG S SK Q + S++S ++E + E V E F+R V F+ P +I ++ E+N+GA+ + N +S R++H+ V++H +R SG + +V T EQHAD Sbjct: 1434 VSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRK-MKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGMTLRISQTAYI-DIVNRFDVQSTSSIPASPGV-----DIGPKRDDESG--GEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITY--ERGSGLGLEVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVL-EDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHAD 1875
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM) HSP 1 Score: 248 bits (634), Expect = 8.230e-69 Identity = 155/468 (33.12%), Postives = 255/468 (54.49%), Query Frame = 1 Query: 16 WEVVPRPKGKTVLGTKTIFRRKIGKNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSCDQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGLY-LGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTT--SAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 W +V R G +G + +F +K ++GR+ +YK R VA+GF+Q + E+ SP + SI +VL + AK + LD A+L +++KE++++E+P N+ + +L KA+YGL A +T GF C AD CV+ + + N V + + VDD+++A++T ++ ++ L+ F +K+LG + LG I D A TL Q Y+ + S+F+ ++ +G K L+K +P T AE E+MR PYR +G L++ T TRPD AY QL + + PG HW+AA R L+ TK+ GI Y G G + A+ DA++ + D RR VSG +M+GG + SK Q+ +++S ++E + L+ E+ + R + L + + E+N+GAI +A+N + RT+HV ++HH +R+ V + YV T +Q AD Sbjct: 869 WTLVRRTSGARPIGCRWVFAKKRNEHGRVVRYKARLVAKGFKQKFGVDFFETYSPVANMNSIRVVLSVVVAKAYVTEQLDADTAFLNSDLKEQVFMEVPYGILNAEHMMCKLDKAIYGLKQAASAWHQTIHAVFMKIGFHSCGADQCVYVKGTKDNYVYVCLY-VDDMIIAAKTNKEIDEVKMALKSAFKMKELGEVKFILGMEIDHDRTASTLMIKQTRYIDDVTSRFNQQDAKAVVNPCESGMK-LTKMQSPTTNAEREDMRNKPYRSLIGCLLYITTCTRPDVAYIVTQLSRFLENPGQQHWKAAIRVLRYLKTTKEFGIVYNGNNGKVA-MEAYTDADWGSNLDDRRSVSGIMIMVGGAPVIFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRTMLKDLGHEQV--GATQVWEDNQGAIALASNAGYNARTKHVDIRHHFIRENVARDIILVGYVGTEDQLAD 1331
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Match: A0A2P6P3Z1_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P3Z1_ROSCH) HSP 1 Score: 235 bits (600), Expect = 3.060e-68 Identity = 153/471 (32.48%), Postives = 247/471 (52.44%), Query Frame = 1 Query: 13 VWEVVPRPKGKTVLGTKTIFRRKIG-KNGRIEKYKCRFVAQGFRQIKSIH*DESSSPTPSQASIMMVLGITAAKDWELRPLDVVMAYLEANVKEELYIELPEDYRNSC--DQVGRLQKAMYGLVHAGLL*SKTYSTELAAKGFEQCQADPCVFRRVLRGNVVVIVVV*VDDLLVASETKRDEEQAINDLRFCFPIKDLGAGL-YLGCHITRDHDAGTLKFDQHHYVRTMASKFSVEETSTTSAA-AGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMWTATMTRPDAAYAAHQLGKINDTPGLAHWRAAKRPLQCPWRTKDVGITYGGAPGSCTKLSAWVDANFATCPDTRR*VSGGAVMLGGGATSWFSKMQKVTSVASPKSECVVLAEVVNELRFLRQVEGFLTPPPIDDNIIIIRENNEGAIKMATNRFNSRRTRHVGVKHHIVRDAVESGTVRTHYVKTGEQHAD 1410 VWE+VP+PK + ++G K +FR+K G + KYK R VA+G+ Q + + DE SP SI ++L I A D E+ +DV A+L +++E++Y+ PE + + D V RL+K++YGL + K + T + G+ +C D CV+ V ++++++ VDD+L+A + E+ L F +KDLGA LG I RD AG + Q Y+ + +F+++ S A LS P ++ E + M+ PY AVG LM+ TRPD A A + K PG HW A K L+ T+ +GI + ++ +VDA++A D RR +G GGG SW S +Q VT++++ ++E + L E E +L G + I ++++ +++ AI +A N+ RT+H+ V++H +RD VESG + V T + AD Sbjct: 13 VWELVPKPKERKLVGCKWVFRKKEGVHDADAIKYKARLVAKGYSQKEGVDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKEDLVCRLRKSLYGLKQSPRQWYKRFDTYMLKIGYTRCLYDCCVYYHVFEDGEIILLLLYVDDMLIACKDMSKIEELKKKLGAEFDMKDLGAAQNILGIEIRRDRKAGKIWLSQEKYILRVLERFNMDGAKVVSIPLAAHYQLSAKQRPSSQKEIDAMKDVPYASAVGCLMYAMICTRPDLAQALSVVSKYMSNPGKPHWEAVKWILRYLKGTRQLGIMFERKQ-EVACVAGFVDADYAGDLDKRRSTTGYVFTCGGGPVSWKSTLQAVTALSTTEAEYMALTEASKEAIWLN---GLASEFGIHQEGVVVKCDSQSAIHLAKNQVFHARTKHIDVRYHRIRDWVESGNIIVEKVHTNDNAAD 479 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig106.598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig106.598.1 >prot_F-serratus_M_contig106.598.1 ID=prot_F-serratus_M_contig106.598.1|Name=mRNA_F-serratus_M_contig106.598.1|organism=Fucus serratus male|type=polypeptide|length=126bp MASKFSVEETSTTSAAAGEKPLSKDDAPQTEAETEEMRVTPYREAVGVLMback to top mRNA from alignment at F-serratus_M_contig106:681630..683039- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig106.598.1 ID=mRNA_F-serratus_M_contig106.598.1|Name=mRNA_F-serratus_M_contig106.598.1|organism=Fucus serratus male|type=mRNA|length=1410bp|location=Sequence derived from alignment at F-serratus_M_contig106:681630..683039- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig106:681630..683039- >mRNA_F-serratus_M_contig106.598.1 ID=mRNA_F-serratus_M_contig106.598.1|Name=mRNA_F-serratus_M_contig106.598.1|organism=Fucus serratus male|type=CDS|length=756bp|location=Sequence derived from alignment at F-serratus_M_contig106:681630..683039- (Fucus serratus male)back to top |