mRNA_F-serratus_M_contig1056.574.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: D7FQY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY8_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 7.330e-23 Identity = 67/152 (44.08%), Postives = 88/152 (57.89%), Query Frame = 1 Query: 1 LTTTPLDSKGRPANTKTV--YTDKTYLALSFKGEEMAEVVLKNKRDWWNRQQVRQPTGRSSSSKKRRTADSNTFCPIITALRGGTITRPRRATADKPIKQEKEVGWRQQSAETFLASMDSMGTDAALKFLDSKGLKVAADIRREVRDLKAKA 450 +T T +D+K + +++T Y T A+S K +E+ + VLKNKR+ W + Q R RRTADS P+I ALR G TR R T +P + V WRQQS ETFLASMDSMG D ALK L+ G A D R+ +R+L+ KA Sbjct: 3 VTATLVDAKHKKRSSQTYSGYAKNTEEAVSEKAKELTDKVLKNKREQWQKAQQRSGXXXXXGG-VRRTADSAVADPVIMALRSGGRTRSRVVTI-QPAEPTAPVDWRQQSTETFLASMDSMGYDNALKHLEEIGSTFAKDTRKRLRELEDKA 152
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: A0A6H5LEY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEY9_9PHAE) HSP 1 Score: 100 bits (250), Expect = 6.650e-22 Identity = 68/151 (45.03%), Postives = 87/151 (57.62%), Query Frame = 1 Query: 1 LTTTPLDSKG--RPANTKTVYTDKTYLALSFKGEEMAEVVLKNKRDWWNRQQVRQPTGRSSSSKKRRTADSNTFCPIITALRGGTITRPRRATADKPIKQEKEVGWRQQSAETFLASMDSMGTDAALKFLDSKGLKVAADIRREVRDLKAK 447 LTTT +D K R +N + VY + T +++ K EMA +VLKNKR+ W + Q G SS RR AD P++ ALRGG TR R T +P + V WRQQ ETFLASMDSMG D ALK L+ A D R+ +R+L+ K Sbjct: 46 LTTTLVDKKNPNRSSNKRQVYVENTEESITSKALEMARIVLKNKREKWEKAQGHSG-GSSSGGGPRRNADREVADPVMAALRGGGRTRSRVVTI-QPAEPTAPVDWRQQCTETFLASMDSMGYDNALKHLEEIVSTFAKDARKRLRELEDK 194
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: A0A6H5JVZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVZ1_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 7.460e-21 Identity = 66/148 (44.59%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 1 LTTTPLDSKGRPANTKTV--YTDKTYLALSFKGEEMAEVVLKNKRDWWNRQQVRQPTGRSSSSKKRRTADSNTFCPIITALRGGTITRPRRATADKPIKQEKEVGWRQQSAETFLASMDSMGTDAALKFLDSKGLKVAADIRREVRDL 438 +T T +DSK + ++++T Y T A+S K +E+ + VLK KR+ W + Q R G SSS RTADS P+I ALRG T R T + P + V WRQQS ETFLASMDSMG D ALK ++ G A D R+ +R L Sbjct: 50 VTATLVDSKHKNSSSQTYSGYVKNTEEAVSEKAKELTDKVLKTKREQWQKAQQRSGGG-SSSGGVGRTADSAVTNPVIMALRGVGRTLSRVVTIE-PAEPTTPVDWRQQSTETFLASMDSMGYDNALKHVEKIGSTFAKDTRKRLRGL 195
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: A0A6H5KI10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 8.060e-21 Identity = 64/126 (50.79%), Postives = 81/126 (64.29%), Query Frame = 1 Query: 76 ALSFKGEEMAEVVLKNKRDWWNRQQVRQPTGRSSSSKKRRTADSNTFCPIITALRGGTITRPRRATADKPIKQEKE-VGWRQQSAETFLASMDSMGTDAALKFLDSKGLKVAADIRREVRDLKAKA 450 A+S + E+ + VLKNKR+ W + Q R G S SS RRTADS P+ITALRGG TR R T++ P++QE E V WRQ + ETFLASMDSMG + AL+ L G A D +R+L+AKA Sbjct: 50 AVSKQAAELTDKVLKNKREQWQKAQQRSG-GSSRSSGVRRTADSAVADPVITALRGGGRTRSRVQTSE-PVEQETEPVNWRQHATETFLASMDSMGHENALRHLKKIGSTFAKDTLVRLRELEAKA 173
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: A0A6H5K847_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K847_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 3.250e-19 Identity = 67/151 (44.37%), Postives = 85/151 (56.29%), Query Frame = 1 Query: 1 LTTTPLDSK--GRPANTKTVYTDKTYLALSFKGEEMAEVVLKNKRDWWNRQQVRQPTGRSSSSKKRRTADSNTFCPIITALRGGTITRPRRATADKPIKQEKEVGWRQQSAETFLASMDSMGTDAALKFLDSKGLKVAADIRREVRDLKAK 447 +T T +DSK R + T + Y + A+S K EE+ + VLKNKR+ W + Q RRT DS P+I ALRG TRPR T +P + V WRQQSAETFLASMDSMG D AL+ L+ G A D R+ +R L+ K Sbjct: 207 VTATLVDSKHKNRSSQTYSGYAKDSEEAVSEKAEELTDKVLKNKRERWQKAQXXXXXXXXXXX-VRRTEDSAVADPVIMALRGVGRTRPRVVTI-QPTEPTAPVDWRQQSAETFLASMDSMGYDNALQHLEKIGSTFAKDTRKRLRGLEDK 355
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: A0A6H5KHT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT7_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 1.790e-17 Identity = 62/151 (41.06%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 1 LTTTPLDSKG--RPANTKTVYTDKTYLALSFKGEEMAEVVLKNKRDWWNRQQVRQPTGRSSSSKKRRTADSNTFCPIITALRGGTITRPRRATADKPIKQEKEVGWRQQSAETFLASMDSMGTDAALKFLDSKGLKVAADIRREVRDLKAK 447 L TT +D K R +N + V+ T ++ K EMA +LKNKR+ W + R RSS RR AD + ALRG TR +T +P + WRQQS ETF+ASMDSMG D AL L+ G K A + R +R+L+AK Sbjct: 46 LITTLVDKKSPNRSSNKQQVFVANTEERVASKALEMAHRLLKNKRERWEKAHGRSGGSRSSGGGARRNADREVADLFMAALRGCGRTRSG-STISEPAEPTAPADWRQQSTETFIASMDSMGYDKALHHLEGTGSKFAKETRVRLRELEAK 195
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: A0A6H5JQZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ3_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 3.460e-12 Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 112 VLKNKRDWWNRQQVRQPTGRSSSSKKRRTADSNTFCPIITALRGGTITRPRRATADKPIKQEKEVGWRQQSAETFLASMDSMGTDAALKFLDSKGLKVAADIRREVRDLKAK 447 +LKNKR+ W + + R SS + AD P++ A RG TR T +P + WRQQS ETF+ASMDSMG + AL L+ G K A + R VR+L+AK Sbjct: 51 LLKNKRERWEKARGRSGGSSSSGGGAKTNADREVADPVMAAFRGCGRTRYG-VTISEPAEPTAPADWRQQSTETFVASMDSMGYNKALHHLEGTGSKFAKETRVRVRELEAK 161
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: A0A6H5KM14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM14_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 2.710e-9 Identity = 52/140 (37.14%), Postives = 73/140 (52.14%), Query Frame = 1 Query: 22 SKGRPANTKTVYTDKTYLALSFKGEEMAEVVLKNKRDWWNRQQVRQPTGRSSSSKKRRTADSNTFCPIITALRGGTITRPRRATADKPIKQEKEVGWRQQSAETFLASMDSMGTDA-ALKFLDSKGLKVAADIRREVRDL 438 S RP++ +T Y + T A+S + EMA+ VLK KRD + R+ D P+I ALRGG TR T KP +QE AE+FLA ++S + + AL+FL SKGL A ++RR +R+L Sbjct: 74 SPNRPSDKETRYVENTEEAVSSEALEMADRVLKKKRDVFLRENGGDXXXXXXXXXXXXXXDDELADPVIVALRGGGRTRSGVETG-KPDEQE--------DAESFLAFLNSKESSSDALEFLASKGLDAAKEVRRRIREL 204
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: A0A6H5KGU5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU5_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 7.210e-9 Identity = 52/140 (37.14%), Postives = 72/140 (51.43%), Query Frame = 1 Query: 22 SKGRPANTKTVYTDKTYLALSFKGEEMAEVVLKNKRDWWNRQQVRQPTGRSSSSKKRRTADSNTFCPIITALRGGTITRPRRATADKPIKQEKEVGWRQQSAETFLASMDSMGTDA-ALKFLDSKGLKVAADIRREVRDL 438 S RP++ +T Y + T A S + EMA+ VLK KRD + R+ D P+I ALRGG TR T KP +QE AE+FLA ++S + + AL+FL SKGL A ++RR +R+L Sbjct: 55 SPNRPSDKETRYVENTEEAASSEALEMADRVLKKKRDVFLRENGGXXXXXXXXXXXXXXXDDELADPVIVALRGGGRTRSGVETG-KPDEQE--------DAESFLAFLNSKESSSDALEFLASKGLDAAKEVRRRIREL 185
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: A0A6H5KNU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU1_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 1.540e-8 Identity = 37/72 (51.39%), Postives = 43/72 (59.72%), Query Frame = 1 Query: 232 ALRGGTITRPRRATADKPIKQEKEVGWRQQSAETFLASMDSMGTDAALKFLDSKGLKVAADIRREVRDLKAK 447 ALRG TR R T +P + V WRQQS ETFLASMDS G D ALK L+ G A D R+ +R L+ K Sbjct: 2 ALRGVGRTRSRVVTI-QPAEPTAPVDWRQQSTETFLASMDSTGYDNALKHLEKIGSTFAKDTRKRLRGLEDK 72 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1056.574.1 >prot_F-serratus_M_contig1056.574.1 ID=prot_F-serratus_M_contig1056.574.1|Name=mRNA_F-serratus_M_contig1056.574.1|organism=Fucus serratus male|type=polypeptide|length=150bp LTTTPLDSKGRPANTKTVYTDKTYLALSFKGEEMAEVVLKNKRDWWNRQQback to top mRNA from alignment at F-serratus_M_contig1056:162413..163449+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1056.574.1 ID=mRNA_F-serratus_M_contig1056.574.1|Name=mRNA_F-serratus_M_contig1056.574.1|organism=Fucus serratus male|type=mRNA|length=1037bp|location=Sequence derived from alignment at F-serratus_M_contig1056:162413..163449+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1056:162413..163449+ >mRNA_F-serratus_M_contig1056.574.1 ID=mRNA_F-serratus_M_contig1056.574.1|Name=mRNA_F-serratus_M_contig1056.574.1|organism=Fucus serratus male|type=CDS|length=900bp|location=Sequence derived from alignment at F-serratus_M_contig1056:162413..163449+ (Fucus serratus male)back to top |