mRNA_F-serratus_M_contig1056.574.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: A0A6H5J7C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7C0_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 6.890e-7 Identity = 36/71 (50.70%), Postives = 43/71 (60.56%), Query Frame = 1 Query: 235 LRGGTITRPRRATADKPIKQEKEVGWRQQSAETFLASMDSMGTDAALKFLDSKGLKVAADIRREVRDLKAK 447 LRG T+ R T +P + V WRQQS ETFLASMDSMG D ALK L+ G A D R+ +R L+ K Sbjct: 3 LRGVGRTQSRVVTI-QPAEPTAPVDWRQQSTETFLASMDSMGYDNALKHLEKIGSTFAKDTRKRLRGLEDK 72
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Match: A0A6H5JA27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA27_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 7.890e-7 Identity = 36/72 (50.00%), Postives = 43/72 (59.72%), Query Frame = 1 Query: 232 ALRGGTITRPRRATADKPIKQEKEVGWRQQSAETFLASMDSMGTDAALKFLDSKGLKVAADIRREVRDLKAK 447 ALRG TR R T +P + V WRQQS ETFLASMDS+G D ALK L+ G A D + +R L+ K Sbjct: 2 ALRGVGRTRSRVVTI-QPAEPTAPVDWRQQSTETFLASMDSIGYDNALKHLEKIGSTFAKDTHKRLRGLEDK 72 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1056.574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1056.574.1 >prot_F-serratus_M_contig1056.574.1 ID=prot_F-serratus_M_contig1056.574.1|Name=mRNA_F-serratus_M_contig1056.574.1|organism=Fucus serratus male|type=polypeptide|length=150bp LTTTPLDSKGRPANTKTVYTDKTYLALSFKGEEMAEVVLKNKRDWWNRQQback to top mRNA from alignment at F-serratus_M_contig1056:162413..163449+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1056.574.1 ID=mRNA_F-serratus_M_contig1056.574.1|Name=mRNA_F-serratus_M_contig1056.574.1|organism=Fucus serratus male|type=mRNA|length=1037bp|location=Sequence derived from alignment at F-serratus_M_contig1056:162413..163449+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1056:162413..163449+ >mRNA_F-serratus_M_contig1056.574.1 ID=mRNA_F-serratus_M_contig1056.574.1|Name=mRNA_F-serratus_M_contig1056.574.1|organism=Fucus serratus male|type=CDS|length=900bp|location=Sequence derived from alignment at F-serratus_M_contig1056:162413..163449+ (Fucus serratus male)back to top |