|
Homology
BLAST of mRNA_F-serratus_M_contig1055.566.1 vs. uniprot
Match: D8LIA6_ECTSI (4a-hydroxytetrahydrobiopterin dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIA6_ECTSI) HSP 1 Score: 166 bits (420), Expect = 1.520e-47 Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 3
Query: 216 KRGLRTGKSHIFVDKPERDSAVATLDGWSEAKGGRDAIFKTFTFANFNEAFAFMTRAALVAEQMDHHPEWFNVYNRVDVTLSTHDLGGVSRKDITLASRLDDFA 527
KR LRTGK H+F D ER++A+ATL GW+EA GRDAI K+F F++FN+AFAFMTRAALVAE+MDHHPEWFNVYNRVDVTLSTHDLGG+SRKDI LA RLD FA
Sbjct: 35 KRELRTGK-HVFTDARERETAIATLSGWAEAGEGRDAISKSFCFSDFNQAFAFMTRAALVAEKMDHHPEWFNVYNRVDVTLSTHDLGGLSRKDIRLAQRLDAFA 137
BLAST of mRNA_F-serratus_M_contig1055.566.1 vs. uniprot
Match: A0A1G7T590_9HYPH (Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Limimonas halophila TaxID=1082479 RepID=A0A1G7T590_9HYPH) HSP 1 Score: 133 bits (335), Expect = 1.790e-35 Identity = 60/92 (65.22%), Postives = 77/92 (83.70%), Query Frame = 3
Query: 252 VDKPERDSAVATLDGWSEAKGGRDAIFKTFTFANFNEAFAFMTRAALVAEQMDHHPEWFNVYNRVDVTLSTHDLGGVSRKDITLASRLDDFA 527
+ + ERDSA+A LDGW+ +G RDAI K++TF FN+AFAFMTR AL AE+MDHHPEWFNVYNRVD+TLS+HD+GGVS++D+ LA + + FA
Sbjct: 5 LSQAERDSALAELDGWTAVEG-RDAIHKSYTFKTFNQAFAFMTRVALAAEKMDHHPEWFNVYNRVDITLSSHDVGGVSQRDVDLAKKAERFA 95
BLAST of mRNA_F-serratus_M_contig1055.566.1 vs. uniprot
Match: UPI00146F625B (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Sneathiella aquimaris TaxID=2599305 RepID=UPI00146F625B) HSP 1 Score: 130 bits (327), Expect = 2.590e-34 Identity = 62/94 (65.96%), Postives = 74/94 (78.72%), Query Frame = 3
Query: 252 VDKPERDSAVATLDGWSEAKGGRDAIFKTFTFANFNEAFAFMTRAALVAEQMDHHPEWFNVYNRVDVTLSTHDLGGVSRKDITLASRLDDFATP 533
++K ERD +ATL GW +A+ GRDAI K+F F +FNEAFAFMTR AL AE++DHHPEWFNVYNRVDVTL+THD GVS KDI LA+ +D P
Sbjct: 5 LEKTERDQKIATLKGW-KAQSGRDAIEKSFRFKSFNEAFAFMTRVALTAEKIDHHPEWFNVYNRVDVTLTTHDADGVSEKDIKLAAFMDKVGDP 97
BLAST of mRNA_F-serratus_M_contig1055.566.1 vs. uniprot
Match: A0A369T4H2_9PROT (Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369T4H2_9PROT) HSP 1 Score: 128 bits (322), Expect = 1.560e-33 Identity = 57/94 (60.64%), Postives = 76/94 (80.85%), Query Frame = 3
Query: 252 VDKPERDSAVATLDGWSEAKGGRDAIFKTFTFANFNEAFAFMTRAALVAEQMDHHPEWFNVYNRVDVTLSTHDLGGVSRKDITLASRLDDFATP 533
+ + ER+ A+ LDGW+ +G RDAI K+FTF F++AF FM+R AL AE+MDHHPEWFNVYNRVD+TLS+HD+GG+S++DI LA ++D FA P
Sbjct: 5 LSEAEREQALKNLDGWTPVEG-RDAIQKSFTFKTFSQAFGFMSRVALAAEKMDHHPEWFNVYNRVDITLSSHDVGGLSQRDIDLAGKIDRFAAP 97
BLAST of mRNA_F-serratus_M_contig1055.566.1 vs. uniprot
Match: A0A2E2MJ56_9PROT (Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E2MJ56_9PROT) HSP 1 Score: 128 bits (321), Expect = 2.410e-33 Identity = 61/87 (70.11%), Postives = 72/87 (82.76%), Query Frame = 3
Query: 267 RDSAVATLDGWSEAKGGRDAIFKTFTFANFNEAFAFMTRAALVAEQMDHHPEWFNVYNRVDVTLSTHDLGGVSRKDITLASRLDDFA 527
R A+ LDGW+E G RDAI KTFTF +FN AFAFMTRAAL+AE+ DHHPEWFNVYNRV+VTL+THD GGV++KDITLA+ +D A
Sbjct: 17 RTQAIRGLDGWTEVTG-RDAIAKTFTFKDFNAAFAFMTRAALLAEKTDHHPEWFNVYNRVEVTLATHDAGGVTQKDITLAAFMDKIA 102
BLAST of mRNA_F-serratus_M_contig1055.566.1 vs. uniprot
Match: A0A7S8C2S1_9HYPH (Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8C2S1_9HYPH) HSP 1 Score: 125 bits (315), Expect = 1.510e-32 Identity = 60/84 (71.43%), Postives = 70/84 (83.33%), Query Frame = 3
Query: 276 AVATLDGWSEAKGGRDAIFKTFTFANFNEAFAFMTRAALVAEQMDHHPEWFNVYNRVDVTLSTHDLGGVSRKDITLASRLDDFA 527
A+A LDGW +A+G RDAI KTFTF FNEAF +MTRAALVAE+MDHHPEWFNVYNRV+VTLS+HD GGV+ +DI LA +D A
Sbjct: 13 ALAGLDGWRDAEG-RDAIAKTFTFKTFNEAFGWMTRAALVAEKMDHHPEWFNVYNRVEVTLSSHDAGGVTERDIALARTMDRLA 95
BLAST of mRNA_F-serratus_M_contig1055.566.1 vs. uniprot
Match: A0A8J6IGV2_9PROT (Putative pterin-4-alpha-carbinolamine dehydratase n=2 Tax=Euryhalocaulis TaxID=1712422 RepID=A0A8J6IGV2_9PROT) HSP 1 Score: 125 bits (315), Expect = 1.920e-32 Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 3
Query: 234 GKSHIFVDKPERDSAVATLDGWSEAKGGRDAIFKTFTFANFNEAFAFMTRAALVAEQMDHHPEWFNVYNRVDVTLSTHDLGGVSRKDITLASRLDDFA 527
G+ K AV+ LDGW+ A+G RDAI KTF F +FNEAF FMTR A+ A+QMDHHPEWFNVYNRV+VTL+THD GGV+ KD+TLAS +D A
Sbjct: 8 GREIEMTGKIGAKDAVSKLDGWNAAEG-RDAIEKTFEFKDFNEAFGFMTRVAIKADQMDHHPEWFNVYNRVEVTLATHDAGGVTDKDVTLASFMDSLA 104
BLAST of mRNA_F-serratus_M_contig1055.566.1 vs. uniprot
Match: UPI000489A264 (4a-hydroxytetrahydrobiopterin dehydratase n=2 Tax=Rhodovibrio TaxID=85274 RepID=UPI000489A264) HSP 1 Score: 125 bits (313), Expect = 3.370e-32 Identity = 60/92 (65.22%), Postives = 69/92 (75.00%), Query Frame = 3
Query: 252 VDKPERDSAVATLDGWSEAKGGRDAIFKTFTFANFNEAFAFMTRAALVAEQMDHHPEWFNVYNRVDVTLSTHDLGGVSRKDITLASRLDDFA 527
+ + ERD AV LDGWS A RDAI KTF F +FN AF FM R AL AE+MDHHPEWFNVYNRVD+TLS+HD+GG S +DI LA + D FA
Sbjct: 5 MSESERDQAVEKLDGWSVAPD-RDAIQKTFQFKSFNAAFGFMQRVALAAEKMDHHPEWFNVYNRVDITLSSHDVGGTSERDIQLAEKADRFA 95
BLAST of mRNA_F-serratus_M_contig1055.566.1 vs. uniprot
Match: UPI000BBC176D (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Magnetospirillum sp. 15-1 TaxID=1979370 RepID=UPI000BBC176D) HSP 1 Score: 125 bits (313), Expect = 3.470e-32 Identity = 61/92 (66.30%), Postives = 74/92 (80.43%), Query Frame = 3
Query: 252 VDKPERDSAVATLDGWSEAKGGRDAIFKTFTFANFNEAFAFMTRAALVAEQMDHHPEWFNVYNRVDVTLSTHDLGGVSRKDITLASRLDDFA 527
+ K ER A+A L+GW+EA+G RDAI ++ F +F EAFAFMTR ALVAE+M+HHPEWFNV+NRVDVTLSTHD GGV+RKDI LA +D A
Sbjct: 5 LTKDERIQALAKLNGWTEAEG-RDAIRRSLRFGDFTEAFAFMTRVALVAERMNHHPEWFNVWNRVDVTLSTHDAGGVTRKDIDLARAIDGAA 95
BLAST of mRNA_F-serratus_M_contig1055.566.1 vs. uniprot
Match: A0A537N024_9PROT (Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N024_9PROT) HSP 1 Score: 124 bits (312), Expect = 4.590e-32 Identity = 56/84 (66.67%), Postives = 69/84 (82.14%), Query Frame = 3
Query: 267 RDSAVATLDGWSEAKGGRDAIFKTFTFANFNEAFAFMTRAALVAEQMDHHPEWFNVYNRVDVTLSTHDLGGVSRKDITLASRLD 518
R++A+ LDGWSE GRDAI K FTF +FNEAF FM RAAL+AE++DHHPEWFNVYNRV+VTL+THD GGV+ +D+ LA +D
Sbjct: 10 RNAAIGRLDGWSEV-AGRDAIGKKFTFKDFNEAFGFMARAALIAEKLDHHPEWFNVYNRVEVTLATHDAGGVTERDVKLAQEMD 92
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 165.6 |
Seed ortholog evalue | 2.1e-38 |
Seed eggNOG ortholog | 2880.D8LIA6 |
Preferred name | PCBD2 |
KEGG rclass | RC01208 |
KEGG ko | ko:K01724 |
KEGG Reaction | R04734 |
KEGG Pathway | ko00790,map00790 |
Hectar predicted targeting category | mitochondrion |
GOs | GO:0000003,GO:0003006,GO:0003674,GO:0003712,GO:0003713,GO:0003824,GO:0004497,GO:0004505,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006355,GO:0006520,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0007049,GO:0008124,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009653,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016054,GO:0016491,GO:0016705,GO:0016714,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019219,GO:0019222,GO:0019439,GO:0019752,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0030435,GO:0030437,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032502,GO:0032505,GO:0034293,GO:0042737,GO:0042763,GO:0042764,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043436,GO:0043496,GO:0043933,GO:0043934,GO:0043935,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045893,GO:0045935,GO:0046395,GO:0048468,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051098,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051291,GO:0051321,GO:0051704,GO:0055114,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0140110,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222,GO:1902680,GO:1903046,GO:1903506,GO:1903508,GO:2000112,GO:2001141 |
EggNOG free text desc. | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity |
EggNOG OGs | COG2154@1,KOG4073@2759 |
EC | 4.2.1.96 |
COG Functional cat. | H |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko04147 |
Exons | 3 |
Model size | 998 |
Cds size | 546 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928887.7355368-UTR-F-serratus_M_contig1055:146081..146098 | 1622928887.7355368-UTR-F-serratus_M_contig1055:146081..146098 | Fucus serratus male | UTR | F-serratus_M_contig1055 146082..146098 + |
1690962616.1426003-UTR-F-serratus_M_contig1055:146081..146098 | 1690962616.1426003-UTR-F-serratus_M_contig1055:146081..146098 | Fucus serratus male | UTR | F-serratus_M_contig1055 146082..146098 + |
1622928887.790651-UTR-F-serratus_M_contig1055:153184..153619 | 1622928887.790651-UTR-F-serratus_M_contig1055:153184..153619 | Fucus serratus male | UTR | F-serratus_M_contig1055 153185..153619 + |
1690962616.1978676-UTR-F-serratus_M_contig1055:153184..153619 | 1690962616.1978676-UTR-F-serratus_M_contig1055:153184..153619 | Fucus serratus male | UTR | F-serratus_M_contig1055 153185..153619 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928887.749692-CDS-F-serratus_M_contig1055:146098..146386 | 1622928887.749692-CDS-F-serratus_M_contig1055:146098..146386 | Fucus serratus male | CDS | F-serratus_M_contig1055 146099..146386 + |
1690962616.1566284-CDS-F-serratus_M_contig1055:146098..146386 | 1690962616.1566284-CDS-F-serratus_M_contig1055:146098..146386 | Fucus serratus male | CDS | F-serratus_M_contig1055 146099..146386 + |
1622928887.7657626-CDS-F-serratus_M_contig1055:151914..152013 | 1622928887.7657626-CDS-F-serratus_M_contig1055:151914..152013 | Fucus serratus male | CDS | F-serratus_M_contig1055 151915..152013 + |
1690962616.1822407-CDS-F-serratus_M_contig1055:151914..152013 | 1690962616.1822407-CDS-F-serratus_M_contig1055:151914..152013 | Fucus serratus male | CDS | F-serratus_M_contig1055 151915..152013 + |
1622928887.7798185-CDS-F-serratus_M_contig1055:153025..153184 | 1622928887.7798185-CDS-F-serratus_M_contig1055:153025..153184 | Fucus serratus male | CDS | F-serratus_M_contig1055 153026..153184 + |
1690962616.190209-CDS-F-serratus_M_contig1055:153025..153184 | 1690962616.190209-CDS-F-serratus_M_contig1055:153025..153184 | Fucus serratus male | CDS | F-serratus_M_contig1055 153026..153184 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1055.566.1 >prot_F-serratus_M_contig1055.566.1 ID=prot_F-serratus_M_contig1055.566.1|Name=mRNA_F-serratus_M_contig1055.566.1|organism=Fucus serratus male|type=polypeptide|length=182bp
MMTTAAATSVAAQVCRKLVSRSTLNRCIASVSTAAASASFRRKIVHPLDG TTPFKCNNFSISSDGGKRGLRTGKSHIFVDKPERDSAVATLDGWSEAKGG RDAIFKTFTFANFNEAFAFMTRAALVAEQMDHHPEWFNVYNRVDVTLSTH DLGGVSRKDITLASRLDDFATPVEPSRPRRS* back to topmRNA from alignment at F-serratus_M_contig1055:146082..153619+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1055.566.1 ID=mRNA_F-serratus_M_contig1055.566.1|Name=mRNA_F-serratus_M_contig1055.566.1|organism=Fucus serratus male|type=mRNA|length=7538bp|location=Sequence derived from alignment at F-serratus_M_contig1055:146082..153619+ (Fucus serratus male) TCTACCGCCCTTGGTTCATGATGACAACAGCAGCAGCTACATCAGTAGCA
GCACAAGTTTGTAGAAAACTCGTCTCACGATCTACGTTGAATCGATGCAT
AGCTAGTGTTAGTACAGCGGCAGCTTCCGCGAGTTTCCGACGGAAAATCG
TGCACCCTCTGGACGGAACCACCCCGTTCAAGTGTAATAACTTCAGCATC
AGCAGCGACGGCGGCAAACGCGGTCTCAGGACAGGGAAGAGTCATATCTT
CGTCGACAAACCTGAGAGAGACAGTGCTGTGGCGACGTTAGATGGGTGGT
CGGAGGTGAGGAGCTGCGCGGAGGCTGTCGTGACATAGATGTTCAAAGTG
CTTACTGAACCGGATGCGGTGGAATTTCGGACTCTTCAATTAGTCAAACC
GACCCACATGGCGATAAGAATTTATTACTGTATTATAGAGGCTACTACTG
ACTGTACCACGCCGGTACGGTACTTTCAACATGCCCACTTCATACCATTA
TTGGGTATAGGAAAGAGACCTGCCAAGGCAGCACCCGTTACTGTAACTAC
TTTGAGGATTACTGCCCCTGTGCCGGCCTCTCGGCAGTGAACGCCATCGG
TACGCGATTGCGTGATCCGATAAACCCGGGGCTAACCCGATCGCGTATGG
CGATTTAAAATAAATAAATGGACGCCGCCGCGGAACTCGGGAGGGATCCC
GTAAGCACCAGATTCAGCCTTTAGGCCAACCTTTATGGGAAACAAAAACG
ACAGTGAAACACAGAAAAGTGAAATTTCTGTGGCAAAATTTTTGTAAACG
TCGCACTATGGGCCCCGTGCCACAGAAATTTCGCCCTACAGAGATTGCGA
ATTTCTGTGGGAGGCTATTTTTCTCTGCCCACCTACAGAAATGAGGCTCA
TTTCTGTAGGTGGCTCGACAAGTTTATTTCGCCACAGAAATGATTCACGC
CTTCCAAGAACGATTGGGAGGTCGGGACTCTAGCATCCCTCCTACGTATC
AAATATCGGCAAAGAAGAGCTCGCGAGTGCTGTTGTACGATGGGTGCCGA
GCAGCAGTAGTTGTGCGATGATCGCCGGAGCAGCAGATTTGGAGGAAATT
TATAGAATCGGTTGAGGCGATGGGCCCGGGCAAGCTGATCGCCGGCGGCG
GGGGCGGTTGAATGGGTGGCGCCGGAGATTAATCAAGCAGTACGAGCGCC
CGACGGCTCGCTATCGAAATGATGTCGCTCTGCCCACTCTATTTGCGATG
TACTCGCAATTTAAGTACTAACGACCCTGTCTCGCCGGACCAAATTCTCG
GACACAAACGCGGAGAGGGAAATATTAATTTTCCCTGTTCAGTTGACTAC
GAGCAGGGCTGGCAACCTTACCCGGTTGATCCATACTCGCGGTGTGCATA
CTTGCACCTGTCTTTGTGCGGTGATGGGTGGCCAAAAATGGCGGGGTTAA
TCCGATATGCTCCCCGTTCTTTTTTGTATTTTTCCTTTATCCCATAAACG
ACCAACTATAGTTTTTCCCCACGTTTTTTTAGGCCACAGAATTTACAAAT
TTCTGTAGTTTGCTTTTCTGTTTTTTCGTTTCCCATAAAGGTTGGCCTTA
GTATAGAGAATGAGCAGGCTGACGCGGGACGGGACTGCCGAAACCGTCTC
GCGAGACCAAATTCTCAGGCGCGAACGGAGACAGGGAAAACTTAATTTTT
CCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCC
ATACTCTTGCTATATGTGATGACCATACATACCTAGTATAAAGAAAAATC
TGAACCCATCTACAGTACTTGTAGAGCTACACCTTCTGTTAATGTCAATA
ATCAATATAATAGCACCCAAGGAGGAAGTCAAAAGGCTTACCAGGTACAT
GAGACCATTGGCTATATAAGGACAAAAACTCTTGACGGGGTTATAAACGG
GTTCTCCAATGTTATTAAATAGTAGCATAGGGTCAACAGCATAGTGTCGG
GGACAAATCCACCGTTATGCTGCTGTACACATGCATTAATCGCCATGCAG
GGAGGGACAACGGAACAGAGGCAAAAACACACGATAGAACCTCTGGAGAC
AACTAAGTATAACTTGGGTTTGTGGTCGGGTTCAAGTGTTGGGAATCGGA
GTCGAGTGTAAGACTTACTACAAGTAGTCCCACAGGGTCAACCATATAAT
ATCGCCTAGAGATCCATCGTCAGCATGGTGGGTACAGGTACAACTTAATA
CTGTATAATAGTGCTGAAACCCATCTGATCCTACTGTAGACCCAGTGTAA
CAAAATTGAGCTGTATCCAAGCTCATCGTCTCTTTTGCCTCTGTTTTACC
TGCAACAGTAGCCGGTCGCCCCGGTAGCTCAGAGGTAACCTTGTAACCTT
CTGACACGTTGGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTCGC
TAAAAACTAAAATAAAAATGCTCAACGAGTGGAGACCGATTATAATATAC
TACTGTACATCGTTAGTACACAAAATTCGAGTTTACGGCCGACGATGGAA
AGGAAAGACTGAATCCTTCTCGCGATAAAAATAAAGGGACGCACCGCAGA
AGGAAGGTGGATGAGGAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGG
CTGGTACGTCCAACAAACTTGGTGTCCAGAATGAATGGGAAGAAAACACA
CACACAACGCACACATTGATTTTCTTATTTTGTGTGTAACCCCGGCTGGT
ACGTCCAACAAATTTGGTGCCCAGAATGAATGGGAAGAAAACACACACAC
AACACACACATTGATTTTCTTATTTTGTATGTGTGGGTGTGTGTGTTTGT
ATTTATTAAATTGCACATAACCGCGTAATCCGGCCCTGTAATCTACTCAT
TCTATGGTACTTCATGTAACCCACCTGGGGGTTACTTCTCTCTGTGTGTG
TGTGTGTGTGTATTTATTAAATTGCACATAACCACGCAATCCGGCTCTGT
CATCCTAGTCATTCTATGCCACTCGCATTGATCCTCCCGAGGGGGGATCA
ATGATACTTATTACGAAAACCTCTAACCAGACGCGACAAAGGGGACACGC
TCTCTCTACTTGTAAAATTCTCACTTAAACTCAGAGTTCCTTGTGCTCCC
CCCCCTGCTTCCTTATTAATCTCTACAATATTTGAGTTGGCAGCTACTGG
ACCGACACTTCCTTTTCTACATCTCTTCCTCGTTCCACCAAAGTCTCCCC
CGTTTCCCCCTTGGCGTCTACAACTATTTAGCGGTTTCTTGCGCTTCTTA
GCCTCTCTTTCGCCATCCCCGACCCTACCCTCGTTCCCGTTCCCTTCGTC
CCCGTTCCCATCTTCGCTACTGACCTTAGGTCCATCCCCGTTCCCATCCG
GTGTTCGTCGATGGGTCTCTACCTCCTTTTTTAGAGTATATATTTACTTT
TTTTTCAACTTGAACTTGTTAGTTTTTTTTTATTAAATATTTTTACCACC
TTGTATGTAGCTGTCCCTTGGCTCCTACTCGTAGAAGGAACTACTGCGCA
TTGTGTTTGTGTGTGTGTGTTTTCTTCCCATCCATTCTGGACATCAAGTT
CGTTGGACGTACCAGCCGGGGTCACACAGGAGGAAGGTCACACAGGATTT
CTCATCCACCTTCCTTCTGCGGTGCGTGCCCTAATTTTTATCGCGAGAAG
GATTCAGCCATTTCTTTTCCCTCGTCGACCGTGAAGTCGAATTTTGTGTA
CTAACGAATTAATCGTTCTCCACCCGTTGGGCATTTTTATTTTAGTTTTT
AGTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAACTCACATCCCAA
CGTGTCAGAAGGTTACGGGGTACCTACTGAGCTACCGGGGCGATTGTCAA
TGAAAAAAAGAGCTATTATAAGAAAGGCGGGTTGGGATTATGAATACTGG
TAGTGTCAAACCCGTAAACACTTAATAATAGTGTTGATCCGTAAAAAACT
TGATACATAATAATGTTAATCCCTAAAAAGCTTATTGATAGTGTCATTTT
GGGTTTCCTGCCCTATTCTCTGCTCTGCCCTGCCCAACTCTTGGAAACTG
AAAATGAAAAAAAAAAATGAAAAGCTTTTTAGTAGCGTTGATTCCTAAAA
AGCCTATCAATAGTAGTGTTAATCCCTAAAAAGCTTATTGATAGCAGTGT
TAATCCCCAAAAAGCTTGATAAAATAGTGTTAATAATCCCTAAAATGCTT
ATCAATGGTGTTAATCCCTTAAAATCTTATTATTAAAGTGTTATTTTGGG
TTCCCTACCCTACCGTGCCCTGTCCTGCCCTGTCCTGCCCAACTCTTGGA
ACACAAGCACAAGGGGACGGGAGCGGGCGGTGAGAGGGCTCACAGGAGTC
AAAAGTCAGAATTTTCGTGTTACTGTATTTCAAAAGGAAGAGGAAAAAAG
TCGGTATTTCCCAGGCATCCAGAGATTGACATTCGCATCTACTCGATAGA
AATCGTGAGGTTCATTTCATCAGGATGACATTAATAATAAATCATGCAGA
CGGTGATACTTAACGGCGTACAATCTTCTTTCATAGGAACAGCGCCACAC
ACAGGTGTGTACAGGATTCTCCCCAAGTTCACCCGGGGGTCTCGACAGGC
GAGATAAGATATTATATTAGCCCGTACCGGGGGCAAGACTTCCGCGGTGC
TAAGCTGCGTCATCGCGTGTAGGTAATCAAAACCGACGCGTGGGGTCTAC
TCACTCATACTCCGCCAAAGAGAGCCGCTTACGTTGTACCTGATGCAACG
AAGTCGATGTCATCATGCTCCAATCGAACGGTCGTTAGATGAAGACATCA
AAAATGGAATGCTCGGGGAATCTTGTCTCGCTGAACACGATCATAAAAGA
CAAATCATACCCCCCCCCCCCTACTAATTATTATATATTAATAGCTTAGC
TCTATACTATACTGGTATATGATCATGATGATAACCGATTGTTGTACGGT
GGGGAAGGGGGGATAGGTGCGCAAGGCGAGCTGTCGGTCCGGTGTCCTGG
GTGTCCCATCCCGTCGGGCGAGTTGTCATAACGGCCCCGGATGTTCGTGC
GGGTTCTGTGTACCCCGGCAAGGTATCGTGTGTACGCGAATGAATCCAGC
TCAAGGTCGTGCGCGGGAGAAAATGTTCTTCGAATATTCTCCGATGACCG
GCGGTATACTCCTCCACCTGTTTTACCGTGCTTGGATCTATGTGTATTAA
GAAGTACCGTATAGCCAACTCGAATCCGACGCCAACACGCGCGTTACCCC
GGTCGTTCAGCGCGATTAGGACACGTGTAGCTCTACTGTAGAGTGCAAAT
AGGAGTCATTTGACTTGTTTGTTGCGCGCGATTGCGGCCATAGCATAGAC
ACACGGGGAGGCAGCTCGGGGCAAGAAAAGGGTTGTTTCAGGCTCACAAG
CAGGTTACTCACTACCAGGTACTATTAATAATACAATAGCTTCTACAGAT
AGGGAAAGAGAGGGAGGGTTTTGAAAAGATTAGATTTGTCCTTTCGTTGT
AGAAATCCTGCAATGTACCTGAGATCTGTTCCAGATTCCCTCGTAAGCGC
ACTTGATTCGCGATTCAATGGTTCTATGCTTAAGCGTCCAAAACGCCCGA
TACTATCTATATCGTGTAGAGCTTTTCATCATGAAACGAGCTCGGGATTC
CTCGGTTCCGACGGGGGGTGCCCGCTGCAAAATATTTCGACGCACAGCAG
TATCTCTACGTAGTACCCTACTTCTACCGAGTTCCGCCTCCTGAACCTTT
CCACAAACGGGCGTGTTCCCCTGAATGCTGCAGGCGAAAGGAGGTCGGGA
CGCGATCTTCAAGACTTTCACCTTCGCCAACTTCAACGAGGCATTTGCCT
TCATGACCAGAGCCGCCTTAGTCGCGGAACAGGTTAGCAGCGCGTGACTA
GACAGCAGTGCCCGTAAGACTACGATATTTTTTTCTAGACGTAGAATTTC
CGGTTGTTCTCTCGAGGATCCATGGCGGAAGTAATACCTGGCCCCGTGCG
TGGAGCTGGGGTGGTTTTACGGGGTTTTCCTCCTGCGAGACGCGTTAAGT
GTGTGTTCCAACTGTAGCTTCCAGAGAGAAAATGCGTCCATTTCGGCCGA
ATATCTCGCCCGGGGTTTCCTCCTGTAGAGGCACCCAAGTCCGAGTTTTT
TCCCGAGTAGGCGTCCTCTTCAGGTGAAGGGCCTTTCGATGGAGCTCTCC
ACCTCGTAAAGGGTGTGCCCGATTTCGATGGAGCTCTCCACCTCGTAAAG
GGTGTACCCGATTTCGATGGAGCTCTCCACCTCGCAAAGGGTGTACCCGG
TTTCTTGCCGCAACGCAAGCAACGCTGACGCTGACGCGAGCTAAAAAAAC
TACCAGGTACTCCGTTGAGCATTTATCGATGCCGAGCGGTTCCGAACCTC
GTTCGTGCCCGAACACCAAGATTTCAAGGCATCGCTTAGATATCTCGTTA
AAGGGTTTGTATAATAATTTAGAAGTTATGTAAATATTTTGATTTGTTTT
TTTGACTTTGCTCTAGAGGGGTTATACAAGTTCAAGAATAAAATAAAATA
AAATAAAAAATACAGTCACTAGGGCGTAGTATTAATCGTTTTCACGGGAT
AAGTCTACAAGTAGCTCCAATTTCTGGTGAAATGTTCAAATATTTGCCTC
CCTCGTGGATGTAGGGCGCACGAAACGGTTCTTAAGCAGGAGCGGTGGCT
GTCCGCAGATCTATTAACTTTCCCGGCCCTGACATCATTGTGGGTGGTAT
TCGCTTTTCCTCGCCTCGAATCGCCTGTGTTTGTCACAAGCAAGACGTTG
GCGGCGCCCGCTAGTTCACTCCACTTGGCACCCAAGGTCGTGTTTTACTT
GACCCGCCCCCGCGCCCCCGCCCCCGCCCCTCCCCACTGACCAGATGGAC
CATCACCCGGAGTGGTTCAACGTGTACAACAGGGTGGACGTGACGCTCTC
GACGCACGACTTGGGAGGCGTCTCGCGCAAGGACATTACGCTGGCGAGTC
GGTTGGATGACTTCGCCACGCCTGTCGAGCCGAGCCGACCACGTCGCTCT
TGAAGGCCACCTTCCCCCCTTGCCCGTGTGCTGTCGTCCCGTTGATGTTG
ACGCTACGACCCCCTTGGGGCTGCCCTCCCTCAAAACTGCCGTGTGCTCT
TGTTTGAAAGCGGTCGACCGCAATCTGCCGGGGAGTGGTGGGTCTCTACT
TCATACTCTATACTATACTATACTATACTATACTATACCATACTATAGCG
TTGATACAGTATACTATACGTGGGTTTAGATGCGTCGGAGCGGTGCTTTT
ACCGGCAACTAGAATCTTCTCGGGGGAGGGGAAGATAAGCTGCTACGGCC
TCGTTCGTTTTCTTGCTCGACTATGACTGTTGATAGGGGTCCGCCGGACT
CGTGAATTGTCTCTCGTTTCTTCAAAGCTTCTCCCACTTGCTGCTTTATT
TTCATTTTATTTAATTGATCCGTGAACGCTTGCAATTA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1055:146082..153619+ >mRNA_F-serratus_M_contig1055.566.1 ID=mRNA_F-serratus_M_contig1055.566.1|Name=mRNA_F-serratus_M_contig1055.566.1|organism=Fucus serratus male|type=CDS|length=1092bp|location=Sequence derived from alignment at F-serratus_M_contig1055:146082..153619+ (Fucus serratus male) ATGATGACAACAGCAGCAGCTACATCAGTAGCAGCACAAGTTTGTAGAAA ACTCGTCTCACGATCTACGTTGAATCGATGCATAGCTAGTGTTAGTACAG CGGCAGCTTCCGCGAGTTTCCGACGGAAAATCGTGCACCCTCTGGACGGA ACCACCCCGTTCAAGTGTAATAACTTCAGCATCAGCAGCGACGGCGGCAA ACGCGGTCTCAGGACAGGGAAGAGTCATATCTTCGTCGACAAACCTGAGA GAGACAGTGCTGTGGCGACGTTAGATGGGTGGTCGGAGATGATGACAACA GCAGCAGCTACATCAGTAGCAGCACAAGTTTGTAGAAAACTCGTCTCACG ATCTACGTTGAATCGATGCATAGCTAGTGTTAGTACAGCGGCAGCTTCCG CGAGTTTCCGACGGAAAATCGTGCACCCTCTGGACGGAACCACCCCGTTC AAGTGTAATAACTTCAGCATCAGCAGCGACGGCGGCAAACGCGGTCTCAG GACAGGGAAGAGTCATATCTTCGTCGACAAACCTGAGAGAGACAGTGCTG TGGCGACGTTAGATGGGTGGTCGGAGGCGAAAGGAGGTCGGGACGCGATC TTCAAGACTTTCACCTTCGCCAACTTCAACGAGGCATTTGCCTTCATGAC CAGAGCCGCCTTAGTCGCGGAACAGGCGAAAGGAGGTCGGGACGCGATCT TCAAGACTTTCACCTTCGCCAACTTCAACGAGGCATTTGCCTTCATGACC AGAGCCGCCTTAGTCGCGGAACAGATGGACCATCACCCGGAGTGGTTCAA CGTGTACAACAGGGTGGACGTGACGCTCTCGACGCACGACTTGGGAGGCG TCTCGCGCAAGGACATTACGCTGGCGAGTCGGTTGGATGACTTCGCCACG CCTGTCGAGCCGAGCCGACCACGTCGCTCTTGAATGGACCATCACCCGGA GTGGTTCAACGTGTACAACAGGGTGGACGTGACGCTCTCGACGCACGACT TGGGAGGCGTCTCGCGCAAGGACATTACGCTGGCGAGTCGGTTGGATGAC TTCGCCACGCCTGTCGAGCCGAGCCGACCACGTCGCTCTTGA back to top
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