mRNA_F-serratus_M_contig1054.560.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1054.560.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE) HSP 1 Score: 179 bits (455), Expect = 2.360e-47 Identity = 118/314 (37.58%), Postives = 163/314 (51.91%), Query Frame = 1 Query: 13 FVLLPEDGNHEVTMFDDLPKGAFVDTTPALPPAIGLPRARRIYFGAVELQKAVGLLQDPDAACISFVGEAGIGKTERALQACHYVRERHCFDAIFYTDCKQPYTDSRHHLPRPEGSLPDMERAYKQYCYRLIGLALGMRPESIFSAETLVNFLMMSAIAQLNQRPVKIIVVLDIPDAFFIVGGEARTSLVKMLDELCLESTILIKVLLTCKEQLLKGTNAVFGNTKERVHEVGRLKREHSASLLLHLSPRDSGLTFGDVDAPKGTTLENVMPYVEVLPLMDAVEGHPGTLCLVGPELLDRSIRSPDVLKMAQMC 954 F+LLP GNH+V +FD LP+G+FVD T P R Y G ELQK V +L DP AC++ GE G GK+ERA+QAC YVR RH FDA+++ D K + + Y C RLIG+A+GM S E LV FL Q + K+++VLD D+ F GG+AR ++K+L LC S L K+L+T ++ L + TN F + ERV +V L +A LLL P + T E+++ +E ++ A EGHPGTL + P L D ++ VL+ C Sbjct: 220 FLLLPHGGNHDVRIFDTLPEGSFVDETREPPARPRCARPVPFYQGLEELQKVVEMLVDPVTACVTVTGEHGSGKSERAIQACDYVRMRHHFDALWWADMKHAMATA----------INSSVWFYDDPC-RLIGIAIGMTQPGPSSEEELVRFLFDRPTVQEGRTCHKVLLVLDDVDSLFEAGGDARDRVLKLLSNLCSMSEHL-KLLVTSEQSLQRDTNERFRHGSERVAKVRPLNDRDAAQLLLDKVPTKFTKKELRLSLSHRCTREDILKALEAHRVLKAAEGHPGTLLRLAPLLEDHNVNDACVLERVTQC 521
BLAST of mRNA_F-serratus_M_contig1054.560.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI) HSP 1 Score: 154 bits (389), Expect = 3.630e-38 Identity = 115/314 (36.62%), Postives = 167/314 (53.18%), Query Frame = 1 Query: 34 GNHEVTMFDDLPKGAFVDTTPALPPAIGLPRARRIYFGAVELQKAVGLLQDPDAACISFVGEAGIGKTERALQACHYVRERHCFDAIFYTDCKQPYTDS-RHHLPRPEGSLPDM--ERAYKQYCYRLIGLALGMRPESIFSAETLVNFLMMSAIAQLNQRPVKIIVVLDIPDAFFIVGGEARTSLVKMLDELC-LESTILIKVLLTCKEQLLKGTNAVFGNTKERVHEVGRLKREHSASLLLHLSPRDSGLTFGDVDAPKGTTLENVMPYVEVLPLMDAV----EGHPGTLCLVGPELLDRSIRSPDVLKMAQM 951 GNH+V +F+ LP+G VD T P +A Y G LQ+ V LL D AAC++ GE G GKTERA+QAC YVRERH FD + DC + +S P +LP + A++ C RLIGLA+GM S + L F+ + Q K+++VLD D+ G+A+ LV++L LC + +K+L T + +LL G G T E V V L+ H++ LL+ PR+ LT +++ G +L +V+ V+ P++ V EGHPGTL + P LLD S+ D ++ +M Sbjct: 112 GNHDVRIFETLPEGQLVDETHPPTPRPPCKKAVPSYKGLAGLQQVVRLLLDERAACVTITGEPGSGKTERAIQACDYVRERHRFDCFLWADCDKAALNSCSDKSGNPFFALPTCLKDSAWEDPC-RLIGLAIGMPQPGPTSEQELHQFIFNNPNTDSGQPFQKVLLVLDNVDSLLERDGDAQDRLVQLLCNLCSIGDGGHLKLLATSEHKLLSGHERFRGGT-ETVARVEPLETRHASELLMDNLPRNLELTELGLESG-GLSLADVLTAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSL--DDACRLKEM 420
BLAST of mRNA_F-serratus_M_contig1054.560.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE) HSP 1 Score: 137 bits (344), Expect = 3.380e-32 Identity = 108/304 (35.53%), Postives = 152/304 (50.00%), Query Frame = 1 Query: 73 GAFVDTTPALPPAIGLPRARRIYFGAVELQKAVGLLQDPDAACISFVGEAGIGKTERALQACHYVRERHCFDAIFYTDCKQPYTDSRHH----LPR-PEGSLPDMERAYKQYCYRLIGLALGMRPESIFSAETLVNFLMMSAIAQLNQRPVKIIVVLDIPDAFFIVGGEARTSLVKMLDELC-LESTILIKVLLTCKEQLLKGTNAVFGNTKERVHEVGRLKREHSASLLLHLSPRDS-----GLTFGDVDAPKGTTLENVMPYVEVLPLMDAV----EGHPGTLCLVGPELLDRSIRSPDVLK 939 G VD T +PP +A Y G V +Q V LL DP C++ GE G GKTE A+QAC YVRERH FD+ + DC + D+ +P P G+ D + + C RLIG+A+GM +A L F+ + Q K+++VLD D+ F +A+ LV +L +LC + +K+L T + +LL+G N F E V V LK +H++ LL+ SPRD GL G G + +V+ VE P++ V GHPGTL + P LL S+ LK Sbjct: 222 GKLVDETRQVPPRPPCKKAVSSYMGLVRVQFVVRLLLDPQTVCVTVTGEPGSGKTELAIQACDYVRERHHFDSFLWADCDKAALDACPETFFVIPNSPNGASGDSV-SLEDLC-RLIGVAIGMPQPGPSTANELHQFIFKNPNTDSGQPFQKVLLVLDNVDSLFERDEDAQDRLVHLLSDLCSMGGGGHLKLLATSEYKLLRG-NGYFRGGSEMVATVKPLKMQHASELLMDNSPRDLQPEELGLQSG------GFSKADVVSAVENHPVLKEVLKIAGGHPGTLVRLAPVLLHGSLNDARKLK 516
BLAST of mRNA_F-serratus_M_contig1054.560.1 vs. uniprot
Match: A0A6H5JN51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN51_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 2.870e-18 Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 34 GNHEVTMFDDLPKGAFVDTTPALPPAIGLPRARRIYFGAVELQKAVGLLQDPDAACISFVGEAGIGKTERALQACHYVRERHCFDAIFYTDC 309 GNH++ +F+ LP+G VD T P +A + G +Q+ V LL +P AAC++ GE G GKTERA+QAC YVRERH FD+ + DC Sbjct: 31 GNHDIRIFETLPEGQLVDETHPPTPRPPCKKAVPSFKGLAGVQQVVRLLLNPQAACVTVTGEHGSGKTERAIQACDYVRERHHFDSFLWADC 122
BLAST of mRNA_F-serratus_M_contig1054.560.1 vs. uniprot
Match: A0A7S0DT24_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DT24_9EUKA) HSP 1 Score: 63.9 bits (154), Expect = 1.100e-7 Identity = 73/272 (26.84%), Postives = 121/272 (44.49%), Query Frame = 1 Query: 13 FVLLPEDGNHEVTMFDDLPKGAFVDTTPALPPAIG-LPRARRIYFGAVELQKAV-GLLQDPDAACISFVGEAGIGKTERALQACHYVRERHCF-DAIFYTDC-KQPYT---------DSRHHLPRPEGSLPDMERAYKQYCYRLIGLALGMRPESIFSAETLVNFLMMSAIAQLNQRPVKIIVVLDIPDAFFIVGGEARTSLVKMLDEL---CL------ESTILIKVLLTCKEQLLKGTNAVFGNTKERVHEVGRLKREHSASLLLHLSPR 762 ++LLP +GNH+V +++D+P+G D T PP++ LP G E AV + D + I+ GEAGIG+ E A+ A Y +R F D + Y D + P T + P+ EG L + +Y I + + A+ L L ++++A Q ++V + DA + R + ++++L CL S + IK LL K+ LL+ ++F L+R + SL L+ +PR Sbjct: 199 YLLLPANGNHDVRIYEDIPRGTMSDHTS--PPSVNNLPAVSPNLLGRGEATHAVVSRIVDQKSRVITLTGEAGIGRREVAVAASQYAVQRQIFADGVVYIDLSRSPRTLVGQIAEVLGINSNPPKSEGKLKSTQASYINSD---IKFRTTQTLQELSQAQPLT--LTLTSLATKLQTKRVLLVAPGLSDAVKKSNPDWRDTFNALIEKLLGSCLGVKLLVTSRVPIKSLLLPKKSLLESVVSIFP-----------LERSQALSLFLNSAPR 452
BLAST of mRNA_F-serratus_M_contig1054.560.1 vs. uniprot
Match: A0A3R7CC34_9STRA (SH2 domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7CC34_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.380e-7 Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 1 Query: 34 GNHEVT-MFDDLPKGAFVDTTPALPPAIGLPRARRIYFGAVELQKAVGLLQDPDAACISFVGEAGIGKTERALQACHYVRERHCFDAIFY 300 GNH + +F DLP G + D TP LP A ++E+ L + A +S VG+AG+GKTE ALQAC Y +RH F+ IF+ Sbjct: 206 GNHAASHLFSDLPAGPYEDLTPPLPVNECDAVAEAFIGRSLEVHAVFTALAE-GARMVSLVGDAGMGKTEVALQACQYATDRHLFERIFF 294
BLAST of mRNA_F-serratus_M_contig1054.560.1 vs. uniprot
Match: W4HDL0_9STRA (SH2 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HDL0_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.900e-7 Identity = 36/90 (40.00%), Postives = 50/90 (55.56%), Query Frame = 1 Query: 34 GNHEVT-MFDDLPKGAFVDTTPALPPAIGLPRARRIYFGAVELQKAVGLLQDPDAACISFVGEAGIGKTERALQACHYVRERHCFDAIFY 300 GNH + +F DLP G + D TP LP A ++E+ L + A +S VG+AG+GKTE ALQAC Y +RH F+ +F+ Sbjct: 212 GNHAASHLFSDLPPGPYEDLTPPLPVNECDAVAEAFIGRSLEVHAVFTALAE-GARMVSLVGDAGMGKTEVALQACQYATDRHLFERVFF 300
BLAST of mRNA_F-serratus_M_contig1054.560.1 vs. uniprot
Match: A0A418AXL4_9STRA (SH2 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AXL4_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 3.320e-7 Identity = 37/90 (41.11%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 34 GNHEVT-MFDDLPKGAFVDTTPALPPAIGLPRARRIYFGAVELQKAVGLLQDPDAACISFVGEAGIGKTERALQACHYVRERHCFDAIFY 300 GNH + +F DLP G + D TP LP A ++E+ L + A + VG+AG+GKTE ALQAC Y ERH F+ IF+ Sbjct: 269 GNHATSHLFSDLPPGMYEDLTPPLPINECDAVAEAFIGRSLEVHAVFTALAE-GARMVCLVGDAGMGKTEIALQACQYATERHLFERIFF 357
BLAST of mRNA_F-serratus_M_contig1054.560.1 vs. uniprot
Match: A0A024US28_9STRA (SH2 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US28_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 3.430e-7 Identity = 37/90 (41.11%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 34 GNHEVT-MFDDLPKGAFVDTTPALPPAIGLPRARRIYFGAVELQKAVGLLQDPDAACISFVGEAGIGKTERALQACHYVRERHCFDAIFY 300 GNH + +F DLP G + D TP LP A ++E+ L + A + VG+AG+GKTE ALQAC Y ERH F+ IF+ Sbjct: 214 GNHATSHLFSDLPPGMYEDLTPPLPINECDAVAEAFIGRSLEVHAVFTALAE-GARMVCLVGDAGMGKTEIALQACQYATERHLFERIFF 302
BLAST of mRNA_F-serratus_M_contig1054.560.1 vs. uniprot
Match: D7FQY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY1_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 4.500e-7 Identity = 74/295 (25.08%), Postives = 123/295 (41.69%), Query Frame = 1 Query: 16 VLLPEDGNHEVTMFDDLPKGAFVDTTPALPPAIGLPRARRI--YFGAVELQKAVGLLQDPDAACISFVGEAGIGKTERALQACHYVRERHCFDAIFYTDCKQPYTDSRHHLPRPEGSLPDMERAYKQYCYRLIGLALGMRPESIFS-AETLVNFLMMSAIAQLNQRPVKIIVVLDIPDAFFIVGGEARTSLVKMLDELCLESTILIKVLLTCKEQLLKGTNAVFGNTKERVHEVGRLKREHSASLLLHLSPRD---SGLTFGDVDAPKGTTLENVMPYVEVLPLMDAVEGHPGTL 882 VLLP +G H ++ FDD G F P P + + + ++I + G + V + + I+ G GIGKTE AL+AC Y RER F F+ + T + P +L ++ I A G+ + I E + + Q +++VLD +F+ + + L ++++LC + L + ++T Q+ G KE+V +GRL +A L + +PR L G V + L M +M A+ HPG + Sbjct: 203 VLLPANGEHWLSPFDDAESGTFTYRVPHSPSKMKMSKKKKISSFRGREIPVQEVYMHMVQHSKVITISGRPGIGKTEVALRACEYARERCLFIETFFVSLQDKTTGT------PITTLKEVAAR--------IANAFGISKQEIQDHTEGFLGCIQHKCGLQKGD----LLLVLDGCSPYFVNERDEKIKLSSVVEQLCPRVSNL-QYIVTVVTQV--------GIAKEKVVNIGRLGELAAAELFVASAPRKVTVEELRGGMVVSGPHVQLAECMRLFAGGVIMSALRRHPGAI 470 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1054.560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1054.560.1 >prot_F-serratus_M_contig1054.560.1 ID=prot_F-serratus_M_contig1054.560.1|Name=mRNA_F-serratus_M_contig1054.560.1|organism=Fucus serratus male|type=polypeptide|length=320bp AAKDFVLLPEDGNHEVTMFDDLPKGAFVDTTPALPPAIGLPRARRIYFGAback to top mRNA from alignment at F-serratus_M_contig1054:246634..251396+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1054.560.1 ID=mRNA_F-serratus_M_contig1054.560.1|Name=mRNA_F-serratus_M_contig1054.560.1|organism=Fucus serratus male|type=mRNA|length=4763bp|location=Sequence derived from alignment at F-serratus_M_contig1054:246634..251396+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1054:246634..251396+ >mRNA_F-serratus_M_contig1054.560.1 ID=mRNA_F-serratus_M_contig1054.560.1|Name=mRNA_F-serratus_M_contig1054.560.1|organism=Fucus serratus male|type=CDS|length=1920bp|location=Sequence derived from alignment at F-serratus_M_contig1054:246634..251396+ (Fucus serratus male)back to top |