mRNA_F-serratus_M_contig1041.433.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1041.433.1 vs. uniprot
Match: D7FHH0_ECTSI (DUF6314 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHH0_ECTSI) HSP 1 Score: 225 bits (574), Expect = 2.240e-66 Identity = 132/249 (53.01%), Postives = 162/249 (65.06%), Query Frame = 3 Query: 297 LGLETAAEVYRYLRGRWDLKKSIDYKVGGMAGTWEGVASFSRQLQQS-NGAAAAPESDAVLEQRERDVELSRSSSGGDSHRERQDESRV-LRYLERGVFKINGVGEGFQAGQRLVYDCGNPSGPVRVYFVDDPQKPNALRFFHELDFRTAPGASAASAAGATFGGDWDGRPGEGEGGVRGSGRCHGEDEANPAVSRSARAEFEHLCVRDLYRGEVEVLGKDEFRTRWHVTGPQKDGRIHATYRRIYSDE 1037 LGL+T A VYRYLRGRW L+K+IDYK GGMAGTW GVA+FS + QQ+ +G+ E + + GD E S + LRY E+G F++NG G GF+AGQRLVYDC P VRV+FVDDP+KP+ALRFFHELDF+TA + + AGA GG+ G GV +G A P RAEFEHLCVRD+YRG+VEV G +EF+T WHVTGPQKDGRI+AT++R S E Sbjct: 30 LGLDTPAGVYRYLRGRWGLEKTIDYKAGGMAGTWRGVATFSPKQQQACDGSNTKEEGE--------------QNHDGDGQDEMDHSSLLFLRYREQGTFRVNGEGAGFEAGQRLVYDCSGPV--VRVHFVDDPKKPDALRFFHELDFQTA--SPYETTAGAGTGGEAGGT------GVAAAGASF----APPPP----RAEFEHLCVRDMYRGKVEVAGPNEFKTSWHVTGPQKDGRINATFKRRLSQE 246
BLAST of mRNA_F-serratus_M_contig1041.433.1 vs. uniprot
Match: A0A7S4Q472_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q472_9DINO) HSP 1 Score: 99.4 bits (246), Expect = 2.330e-20 Identity = 72/240 (30.00%), Postives = 96/240 (40.00%), Query Frame = 3 Query: 303 LETAAEVYRYLRGRWDLKKSIDYKVGGMAGTWEGVASFSRQLQQSNGAAAAPESDAVLEQRERDVELSRSSSGGDSHRERQDESRVLRYLERGVFKINGVGEGFQAGQRLVYDCGNPSGPVRVYFVDDPQKPNALRFFHELDFRTAPGASAASAAGATFGGDWDGRPGEGEGGVRGSGRCHGEDEANPAVSRSARAEFEHLCVRDLYRGEVEVLGKDEFRTRWHVTGPQKDGRIHATYRR 1022 L + V +L GRW L K+ DY++GG G EG A+F+ Q L Y ERG ++ G+ F+A +R ++ PV VYFVDD K + + ELD T+ G P E G G C S SAR++FEHLC+ DLY G + V G D F W + GP KDG I ++RR Sbjct: 6 LTSGEAVKAFLAGRWILSKTFDYRIGGGRGKMEGFATFAEAPQLRT---------------------------------------ALMYEERGTVQLEGLSNTFEAYRRYCFNTAK--WPVEVYFVDDDTKKDLVTLLPELDCHTSFFVPLPF-----------GEPVES--GCSQQGSC----------SSSARSDFEHLCINDLYSGSLTVTGPDRFEWNWSIVGPAKDGTISCSFRR 181
BLAST of mRNA_F-serratus_M_contig1041.433.1 vs. uniprot
Match: A0A813LT30_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LT30_POLGL) HSP 1 Score: 83.2 bits (204), Expect = 3.650e-14 Identity = 65/236 (27.54%), Postives = 92/236 (38.98%), Query Frame = 3 Query: 321 VYRYLRGRWDLKKSIDYKVGGMAGTWEGVASFSRQLQQSNGAAAAPESDAVLEQRERDVELSRSSSGGDSHRERQDESRVLRYLERGVFKINGVGEGFQAGQRLVYDCGNPSGPVRVYFVDDPQKPN-ALRFFHELDFRTAPGASAASAAGATFGGDWDGRPGEGEGGVRGSGRCHGEDEANPAVSRSARAEFEHLCVRDLYRGEVEVLGKDEFRTRWHVTGPQKDGRIHATYRRI 1025 V +L GRW + K+ DY++GG GT EG A+F+ Q+ + VL Y ERG ++ G+ + +A + ++ G PV VYFVDD K ++ H + FG E+ S S+ A F HLC+ DLY G++ V D F W VTGP KDG I +YRR+ Sbjct: 70 VRAFLLGRWAMSKTFDYRIGGGRGTMEGFATFTETPQRCD---------------------------------------VLMYEERGAVQLEGLAKPVEAYRLYCFNTGR--WPVEVYFVDDDAKTQRSVTKKHLPSILPELACHTSFFVPLPFG------------------------ESPSEQSGSSEACFNHLCIEDLYSGQLLVRSPDLFEWNWSVTGPHKDGGIICSYRRM 240
BLAST of mRNA_F-serratus_M_contig1041.433.1 vs. uniprot
Match: A0A813JYV2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JYV2_POLGL) HSP 1 Score: 82.8 bits (203), Expect = 5.030e-14 Identity = 67/236 (28.39%), Postives = 93/236 (39.41%), Query Frame = 3 Query: 321 VYRYLRGRWDLKKSIDYKVGGMAGTWEGVASFSRQLQQSNGAAAAPESDAVLEQRERDVELSRSSSGGDSHRERQDESRVLRYLERGVFKINGVGEGFQAGQRLVYDCGNPSGPVRVYFVDDPQKPN-ALRFFHELDFRTAPGASAASAAGATFGGDWDGRPGEGEGGVRGSGRCHGEDEANPAVSRSARAEFEHLCVRDLYRGEVEVLGKDEFRTRWHVTGPQKDGRIHATYRRI 1025 V +L GRW + K+ DY++GG GT EG A+F+ Q+ + VL Y ERG ++ G+ + +A + ++ G PV VYFVDD K ++ H + FGG P E S S+ A F HLC+ DLY G++ V D F W VTGP KDG I +YRR+ Sbjct: 71 VRAFLLGRWAMSKTFDYRIGGGRGTMEGFATFTETPQRCD---------------------------------------VLMYEERGAVQLEGLAKPVEAYRLYCFNTGR--WPVEVYFVDDDAKTQRSVTKKHLPSILPELACHTSFFVPLPFGGV----PSE--------------------QSGSSEACFNHLCIEDLYSGQLLVRSPDLFEWNWSVTGPHKDGGIICSYRRM 241
BLAST of mRNA_F-serratus_M_contig1041.433.1 vs. uniprot
Match: A0A812H3G7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812H3G7_9DINO) HSP 1 Score: 75.1 bits (183), Expect = 4.620e-12 Identity = 56/159 (35.22%), Postives = 68/159 (42.77%), Query Frame = 3 Query: 558 VLRYLERGVFKINGVGEGFQAGQRLVYDCGNPS-GPVRVYFVDDPQKPNALRFFHELDFRTAPGASAASAAGATFGGDWDGRPGEGEGGVRGSGRCHGEDEANPAVSRSARAEFEHLCVRDLYRGEVEVLGKDEFRTRWHVTGPQKDGRIHATYRRIYS 1031 VL Y ERG +++G +A + + C N S PV VYFVDDP K + EL T+ A EG G S + A F HLC+ DLY G++ V D F W V GP KDG I ATYRRI S Sbjct: 55 VLMYEERGDMQLDGFPRPVEAYR---FYCFNTSCWPVEVYFVDDPTKKHLPSLLPELAVHTSFFVPLAF---------------EGAG------------------SPESLAAFRHLCIDDLYSGQLRVNSADSFEWNWSVQGPNKDGDIKATYRRISS 177
BLAST of mRNA_F-serratus_M_contig1041.433.1 vs. uniprot
Match: A0A812XNV2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812XNV2_9DINO) HSP 1 Score: 67.8 bits (164), Expect = 3.480e-10 Identity = 45/129 (34.88%), Postives = 53/129 (41.09%), Query Frame = 3 Query: 642 CGNPS-GPVRVYFVDDPQKPNALRFFHELDFRTAPGASAASAAGATFGGDWDGRPGEGEGGVRGSGRCHGEDEANPAVSRSARAEFEHLCVRDLYRGEVEVLGKDEFRTRWHVTGPQKDGRIHATYRRI 1025 C N S PV VYFVDDP K + EL+ T+ A EG G S + F HLC+ DLY G++ V D F W V GP KDG I ATYRR+ Sbjct: 17 CFNTSCWPVEVYFVDDPTKKHLPSLLPELNVHTSFFVPLAF---------------EGAG------------------SPESEGTFRHLCIDDLYSGQLRVNSADSFEWNWSVQGPNKDGEIKATYRRV 112
BLAST of mRNA_F-serratus_M_contig1041.433.1 vs. uniprot
Match: A0A812WUY4_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812WUY4_SYMPI) HSP 1 Score: 72.4 bits (176), Expect = 1.440e-9 Identity = 52/158 (32.91%), Postives = 66/158 (41.77%), Query Frame = 3 Query: 558 VLRYLERGVFKINGVGEGFQAGQRLVYDCGNPSGPVRVYFVDDPQKPNALRFFHELDFRTAPGASAASAAGATFGGDWDGRPGEGEGGVRGSGRCHGEDEANPAVSRSARAEFEHLCVRDLYRGEVEVLGKDEFRTRWHVTGPQKDGRIHATYRRIYS 1031 VL Y ERG ++ G +A + ++ G PV VYFVDDP K + EL T+ A EG G S + A F HLCV DLY G++ V D F W V GP KDG I A+Y+R+ S Sbjct: 700 VLMYEERGDMQLEGFPRPVEAYRFYCFNTG--CWPVEVYFVDDPTKKHLPPLLPELSVHTSFFVPLAF---------------EGAG------------------SPESLATFRHLCVDDLYSGQLRVGSADSFEWNWSVEGPNKDGDIKASYQRVTS 822
BLAST of mRNA_F-serratus_M_contig1041.433.1 vs. uniprot
Match: A0A7S3ULH3_OXYMA (Hypothetical protein n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3ULH3_OXYMA) HSP 1 Score: 55.5 bits (132), Expect = 1.730e-5 Identity = 42/165 (25.45%), Postives = 57/165 (34.55%), Query Frame = 3 Query: 558 VLRYLERGVFKINGVGEGFQAGQRLVYDCGNPSGPVRVYFVDDPQK---PNALR-------FFHELDFRTAPGASAASAAGATFGGDWDGRPGEGEGGVRGSGRCHGEDEANPAVSRSARAEFEHLCVRDLYRGEVEVLGKDEFRTRWHVTGPQKDGRIHATYRR 1022 +L Y E G + ++ ++ G PV VYFVDD K P + FFHEL +D P V A F HLC++DLY GE+ + F W + GP KDG I T+ + Sbjct: 30 LLLYEETGDLLLENAAAALSVSKKYAFNTG--VWPVEVYFVDDNTKLEDPPVVEGAGFHTSFFHELPLA--------------------------------------DDAVLPTV-----ASFSHLCIQDLYTGELRFPSESSFEWNWTIVGPMKDGTILTTFEK 149 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1041.433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1041.433.1 >prot_F-serratus_M_contig1041.433.1 ID=prot_F-serratus_M_contig1041.433.1|Name=mRNA_F-serratus_M_contig1041.433.1|organism=Fucus serratus male|type=polypeptide|length=285bp MSVPSSTTARAGGNNAEVPTTSGVGPRVDHLGLETAAEVYRYLRGRWDLKback to top mRNA from alignment at F-serratus_M_contig1041:37329..43264- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1041.433.1 ID=mRNA_F-serratus_M_contig1041.433.1|Name=mRNA_F-serratus_M_contig1041.433.1|organism=Fucus serratus male|type=mRNA|length=5936bp|location=Sequence derived from alignment at F-serratus_M_contig1041:37329..43264- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1041:37329..43264- >mRNA_F-serratus_M_contig1041.433.1 ID=mRNA_F-serratus_M_contig1041.433.1|Name=mRNA_F-serratus_M_contig1041.433.1|organism=Fucus serratus male|type=CDS|length=1710bp|location=Sequence derived from alignment at F-serratus_M_contig1041:37329..43264- (Fucus serratus male)back to top |