mRNA_F-serratus_M_contig1037.389.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1037.389.1
Unique NamemRNA_F-serratus_M_contig1037.389.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1037.389.1 vs. uniprot
Match: A0A6H5JEP9_9PHAE (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEP9_9PHAE)

HSP 1 Score: 659 bits (1700), Expect = 1.340e-232
Identity = 315/448 (70.31%), Postives = 373/448 (83.26%), Query Frame = 2 
Query:  179 ATAENALGEVSAAAEVWESFEEKDHDRFLLEFWQKKPLLIRRAVSGFSTVLSKDELAGLACCPDVESRIVSGGKMVPEAGKDWEVMLGPFEEQVFSELGNTHWTLLVNEVNRHVPEVSDLLGKFRFVPSWRVDDVMVSYAPEGGSVGPHVDSYDVFLLQGSGKRRWAIEGSRTSGEVEKARSVQDVDVRVLADFKEDQAWVLEPGDALYLPPRVAHYGVSLDEECMTYSVGFRAPSARDLVAFFGDHVSSTVTKADHFFADPDLRKQINHGLISREAVSRAREIIRQAVLSALDDDDDFDRWFGEHVTRSRRDHTGYPVPMDDLEGLSFGYQLPEDVTSAIRRAYRKGNTLSAGAGLDN-LGPFVYHAEGITFAFVEHVGSKGGTTLFVDGNAFPLPAQRAFVASLICKSSRLSPQDLGPALEGEHGTEVEELLHLLLRGGFVYPADD 1519
            A  E+A+GEV   AEVW+ F E+DHDRFL EFWQKKPLLIR+A+ GF T+L+KDELAGL+CCPDVE+R+V+GG+ V  AGKDWEV  GPFEE++FS LG THWTLLVNEVNRHVPEVSDLL KF+F+PSWRVDDVMVSYAP+GGSVGPHVD+YDVFLLQG+GKR W+IE S TSGE E+ R V+D+D+RVL +FK+ + WVLEPGDALYLPPR+AHYGVS DEECMTYSVGFRAPS RDLV+FFG+HV ST TK D FF DP+L++Q +HGLISREAVS+A+ ++R+A+LSALDDD  FDRWFG  VTRSRRDH+ YPVPMDD +GLSFGYQ P+DVT+A++RA+ K     A       LGPFVYHAEG+TFAFVEH G   G TLFVDG  FP+P + AF A+L+C S RLSP++LGPAL GE G  VE LLH LL+ G++YPADD
Sbjct:   50 AAVESAVGEV-VKAEVWQGFSEEDHDRFLAEFWQKKPLLIRQAIKGFETILTKDELAGLSCCPDVEARVVTGGRYVDNAGKDWEVEHGPFEEKMFSNLGETHWTLLVNEVNRHVPEVSDLLMKFQFIPSWRVDDVMVSYAPKGGSVGPHVDNYDVFLLQGAGKRLWSIEDSFTSGEEEEERLVKDIDLRVLTEFKKSEGWVLEPGDALYLPPRLAHYGVSQDEECMTYSVGFRAPSVRDLVSFFGEHVGSTATKPDDFFQDPNLKRQESHGLISREAVSKAKGLVREALLSALDDDVAFDRWFGAQVTRSRRDHSSYPVPMDDEQGLSFGYQFPKDVTAAVKRAFHKEAESGAXXXXXXXLGPFVYHAEGLTFAFVEHEGRGQGATLFVDGTDFPVPQEMAFAAALVCDSQRLSPRELGPALLGEQGEGVETLLHSLLKEGYLYPADD 496
[Close]
BLAST of mRNA_F-serratus_M_contig1037.389.1 vs. uniprot
Match: A0A836CR86_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR86_9STRA)

HSP 1 Score: 476 bits (1224), Expect = 1.500e-160
Identity = 248/451 (54.99%), Postives = 310/451 (68.74%), Query Frame = 2 
Query:  176 QATAENALGEVSAAAEVWESFEEKDHDRFLLEFWQKKPLLIRRAVSGFSTVLSKDELAGLACCPDVESRIVSGGKMVPEAGKDWEVMLGPFEEQVFSE--LGNTHWTLLVNEVNRHVPEVSDLLGKFRFVPSWRVDDVMVSYAPEGGSVGPHVDSYDVFLLQGSGKRRWAIEGSR-TSGEVEKARSVQDVDVRVLADFKEDQAWVLEPGDALYLPPRVAHYGVSLDEECMTYSVGFRAPSARDLVAFFGDHVSSTVTKADHFFADPDLRKQINHGLISREAVSRAREIIRQAVLSALDDDDDFDRWFGEHVTRSRRDHTGYPVPMDDLEGLSFGYQLPEDVTSAIRRAYRKGNTLSAGAGLDNLGPFVYHAEGITFAFVEHVGSKGGTTLFVDGNAFPLPAQRAFVASLICKSSRLSPQDLGPALEGEHGTEVEELLHLLLRGGFVYPADD 1519
            ++TA+++ G     A+VW+ FE   H+ FL EFWQKKPLLIR+A S F + +S DELAGL+C  DVESRIV+GGK       DW V  GPF+E  F E  LG +HWTLLVNEVNRHVPEVSDLL +F FVP+WRVDDVM+SYA  GGSVG HVDSYDVFLLQG+G+R W+IE     + E E +R V ++D RVL DF   ++WVL PGD LYLPPR AH+GVSLD+ C T S+GFRAPS RDL+ FF D V+S        + DPDL  Q N G I R A+ RAR+ +R AV++AL+D+  F  WFG +VT+SRRDH GYPVP++  E +S  Y  P  V  A++RA       SAG G    GPF+Y +EG+TFA+VEH G KG T LF+DG++F L     F A L+C+  RLSP+D+G  L G H  ++  LL  LL GG++Y ADD
Sbjct:   53 KSTAKSSGGVAKQEADVWQGFEASRHEEFLAEFWQKKPLLIRQAFSEFQSPISPDELAGLSCADDVESRIVTGGKT--PGNSDWAVRHGPFDEGTFEEEELGGSHWTLLVNEVNRHVPEVSDLLQRFAFVPNWRVDDVMISYAARGGSVGAHVDSYDVFLLQGTGQREWSIEAQPIATAEEEYSRLVPEIDARVLEDFTAARSWVLSPGDMLYLPPRWAHHGVSLDDACTTISIGFRAPSHRDLITFFTDAVASQRVPQTAMYQDPDLTIQANPGQIQRGAIDRARDAVRSAVVAALNDEHFFADWFGAYVTKSRRDHAGYPVPLEPDE-ISTVYDSPSAVVEAMKRAAE-----SAGDG----GPFLYRSEGLTFAYVEHEGEKGAT-LFIDGHSFHLGPGMVFAAELLCQGPRLSPRDMGHHLTGAHAGDLAHLLQQLLLGGYLYAADD 490
[Close]
BLAST of mRNA_F-serratus_M_contig1037.389.1 vs. uniprot
Match: A0A836CPF2_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPF2_9STRA)

HSP 1 Score: 350 bits (899), Expect = 9.760e-114
Identity = 184/351 (52.42%), Postives = 236/351 (67.24%), Query Frame = 2 
Query:  491 LLVNEVNRHVPEVSDLLGKFRFVPSWRVDDVMVSYAPEGGSVGPHVDSYDVFLLQGSGKRRWAIEGSR-TSGEVEKARSVQDVDVRVLADFKEDQAWVLEPGDALYLPPRVAHYGVSLDEECMTYSVGFRAPSARDLVAFFGDHVSSTVTKADHFFADPDLRKQI-------NHGLISREAVSRAREIIRQAVLSALDDDDDFDRWFGEHVTRSRRDHTGYPVPMDDLEGLSFGYQLPEDVTSAIRRAYRKGNTLSAGAGLDNLGPFVYHAEGITFAFVEHVGSKGGTTLFVDGNAFPLPAQRAFVASLICKSSRLSPQDLGPALEGEHGTEVEELLHLLLRGGFVYPADD 1519
            +++    +HVPEVSDLL +F FVP+WRVDDVM+SYA  GGSVG H+DSYDVFLLQG+G+R W+IE     + E E +R V D++VRVL DF   ++WVL PGD LYLPPR AH+GVSLD+EC T S+GFRAPS RDL+ FF D V+S        + DPDL  Q        N G I R A+ RARE +R AV++AL+D+  F  WFG +VT+SRRDHTGYPVP++  E +S  Y  P  V  A++RA +     SA  G    GPF+Y +EG+ FA+VEH G KG T LF+DG++F L     F A L+C+  RLSP+D+G  L G H  ++  LL  LL GG++Y ADD
Sbjct:    1 MVIQGTAQHVPEVSDLLQRFAFVPNWRVDDVMISYAARGGSVGAHIDSYDVFLLQGTGQREWSIEAQPIATAEEEFSRLVPDINVRVLEDFNAARSWVLSPGDMLYLPPRWAHHGVSLDDECTTISIGFRAPSHRDLITFFMDAVASQRVPQTAMYEDPDLTIQXXXXXXXANPGQIQRGAIDRAREAVRSAVVTALNDEHFFADWFGAYVTKSRRDHTGYPVPLEPDE-ISTVYDSPSAVVDAMKRAAK-----SAADG----GPFLYRSEGLAFAYVEHEGEKGAT-LFIDGHSFHLGPGMVFAAELLCQGPRLSPRDMGHHLTGAHAGDLAHLLQQLLLGGYLYAADD 340
[Close]
BLAST of mRNA_F-serratus_M_contig1037.389.1 vs. uniprot
Match: A0A2T2SBG2_9BACT (Cupin domain-containing protein n=3 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A2T2SBG2_9BACT)

HSP 1 Score: 305 bits (780), Expect = 3.910e-95
Identity = 184/416 (44.23%), Postives = 242/416 (58.17%), Query Frame = 2 
Query:  260 FLLEFWQKKPLLIRRAVSGFSTVLSKDELAGLACCPDVESRIVSGGKMVPEAGKD-WEVMLGPFEEQVFSELGNTHWTLLVNEVNRHVPEVSDLLGKFRFVPSWRVDDVMVSYAPEGGSVGPHVDSYDVFLLQGSGKRRWAIEGSRTSGEVEKARSVQDVDVRVLADFKEDQAWVLEPGDALYLPPRVAHYGVSLDEECMTYSVGFRAPSARDLVAFFGDHVSSTVTKADHFFADPDLRKQINHGLISREAVSRAREIIRQAVLSALDDDDDFDRWFGEHVTRSRRDHTGYPVPMDDLEGLSFGYQLPEDVTSAIRRAYRKGNTLSAGAGLDNLGPFVYHAEGITFAFVEHVGSKGGTTLFVDGNAFPLPAQRAFVASLICKSSRLSPQDLGPALEGEHGTEVEELLHLLLRGGFV 1504
            FL   WQKKPL++R A+  F + LS +ELAGLAC   VESR+V     + E G+  WE+  GPF+++ F +L  THWT+LV EV+R +PEV  LL  FRF+P WR+DD+MVSYAP  G+VGPH+D+YDVFLLQG G RRW I     +  VE    V D+DVR+LADF+ D+++VL PGD LYLPPRVAH+G++ D+ECMTYSVGFRAP  ++L+  F  H    V   D  ++DPDL+   + G I     + AR  + Q +   L D DD DRW G ++T   RD    P             + P    SA+  A R+G  L  G  + NL            AF+EH  S G TTLF +G+A  L A  A+ A L+    R+    L P  E E      +LL  L+R G +
Sbjct:   19 FLDTHWQKKPLVVRDALPNFRSPLSPNELAGLACEDGVESRLV-----LREGGEHPWELRHGPFDQEAFLDLPETHWTVLVQEVDRLIPEVGALLDHFRFLPDWRIDDIMVSYAPTHGTVGPHIDNYDVFLLQGQGHRRWEIG----TEPVETEEIVPDLDVRILADFEPDESFVLGPGDMLYLPPRVAHHGIAEDDECMTYSVGFRAPRHQELIGGFLQHAVEQVDP-DARYSDPDLKPVEDPGAIQ----ASARTKVHQLLEGLLKDPDDIDRWLGRYLTEPSRDRRAVPS------------ESPVSA-SALVDALREGTDLRRGP-VSNL------------AFIEH--SDGTTTLFANGDAVSLDADLAYAAPLVTGRERIPADTLTPHFEDE---AFVDLLVSLVREGLL 389
[Close]
BLAST of mRNA_F-serratus_M_contig1037.389.1 vs. uniprot
Match: A0A317MUE7_9GAMM (50S ribosomal protein L16 3-hydroxylase n=1 Tax=Plasticicumulans acidivorans TaxID=886464 RepID=A0A317MUE7_9GAMM)

HSP 1 Score: 303 bits (775), Expect = 1.920e-94
Identity = 178/420 (42.38%), Postives = 244/420 (58.10%), Query Frame = 2 
Query:  257 RFLLEFWQKKPLLIRRAVSGFSTVLSKDELAGLACCPDVESRIV--SGGKMVPEAGKDWEVMLGPFEEQVFSELGNTHWTLLVNEVNRHVPEVSDLLGKFRFVPSWRVDDVMVSYAPEGGSVGPHVDSYDVFLLQGSGKRRWAIEGSRTSGEVEKARSVQDVDVRVLADFKEDQAWVLEPGDALYLPPRVAHYGVSLDEECMTYSVGFRAPSARDLVAFFGDHVSSTVTKADHF--FADPDLRKQINHGLISREAVSRAREIIRQAVLSALDDDDDFDRWFGEHVTRSRRDHTGYPVPMDDLEGLSFGYQLPEDVTSAIRRAYRKGNTLSAGAGLDNLGPFVYHAEGITFAFVEHVGSKGGTTLFVDGNAFPLPAQRAFVASLICKSSRLSPQDLGPALEGEHGTEVEELLHLLLRGGFV 1504
            +FL ++WQKKPLL+R+AV  F + +S +ELAG+AC  DV SRIV   GG+      + WE+  GPF E  F EL  THWTLLV+++ +  P++++++  FRF+P WR+DD+MVSYAP+ GSVGPHVD YDVFLLQG G+RRW +    ++  V+    + DV++R++ DF  +  WVLEPGD LYLPPR+AHYG++L   CMTYS+GFRAPS  D+V  F D +   +  +DH   + DPDL  Q N G IS +A+ R +++IR  +L++   DD  + WFG ++T         P P    E     YQ  E     +R   R+G  L    G               FA+++H    G  TLFVDG  F L  Q A  A L+C+        L P L  E   E+  LL L+  G  V
Sbjct:   15 QFLRDYWQKKPLLVRQAVPDFRSPISPEELAGMACEEDVVSRIVMEKGGR------RPWELRRGPFTEDEFIELPETHWTLLVSDIEKQAPDLAEIIEPFRFIPDWRIDDLMVSYAPKDGSVGPHVDDYDVFLLQGLGQRRWQV----STQPVDPDNFLADVELRIMDDFSAEFDWVLEPGDLLYLPPRMAHYGLALGP-CMTYSIGFRAPSHSDMVGRFVDFL---MEDSDHETRYRDPDLAAQDNPGEISFDALDRIKDLIRSQLLTS---DDIIESWFGRYITE--------PKPGFVAEPEDDPYQAKE-----LREFLRQGGQLERNPGS-------------RFAYIDH---SGNLTLFVDGQEFVLGPQIADFARLLCRRRTFDAATLRPVLGNESAMEL--LLDLVNEGYLV 386
[Close]
BLAST of mRNA_F-serratus_M_contig1037.389.1 vs. uniprot
Match: A0A2A8D074_9BACT (Cupin n=1 Tax=Longibacter salinarum TaxID=1850348 RepID=A0A2A8D074_9BACT)

HSP 1 Score: 302 bits (774), Expect = 2.980e-94
Identity = 178/402 (44.28%), Postives = 232/402 (57.71%), Query Frame = 2 
Query:  254 DRFLLEFWQKKPLLIRRAVSGFSTVLSKDELAGLACCPDVESRIV--SGGKMVPEAGKDWEVMLGPFEEQVFSELGNTHWTLLVNEVNRHVPEVSDLLGKFRFVPSWRVDDVMVSYAPEGGSVGPHVDSYDVFLLQGSGKRRWAIEGSRTSGEVEKARSVQDVDVRVLADFKEDQAWVLEPGDALYLPPRVAHYGVSLDEECMTYSVGFRAPSARDLVAFFGDHVSSTVTKADHFFADPDLRKQINHGLISREAVSRAREIIRQAVLSALDDDDDFDRWFGEHVTRSRRDHTGYPVPMDDLEGLSFGYQLPEDVTSA-IRRAYRKGNTLSAGAGLDNLGPFVYHAEGITFAFVEHVGSKGGTTLFVDGNAFPLPAQRAFVASLICKSSRLSPQDLGPALEGE 1450
            + FL E+WQKKPLLIR A+  F + L   ELAGLAC   VESR++   GG+      K WE+  GPF+E+ F  L  + WT+LV EV+R +PEV+DLL  F FVP WR+DDVMVSYAP+ G+VG H+D+YDVFLLQG G RRW         E      V D+DVR+L DF+ D+  VLEPGD LYLPPRVAH+GVSLD+ECMTYS+GFRAPS  +L+A F  +    +   D  + DPDL      G IS +A++  R ++R    S  +DDD  DRWFG  VT  +RD               F   LPEDV++  I  A R G  L  G   +              AF+ H    G  +LF +G+   L  + AF A L+  +  +  ++L P L+ +
Sbjct:   14 ETFLNEYWQKKPLLIRGALPTFESPLEPGELAGLACEEGVESRLILEEGGE------KPWELRFGPFDEEDFLSLPESKWTVLVQEVDRLIPEVADLLDAFAFVPKWRIDDVMVSYAPKDGNVGAHIDNYDVFLLQGQGTRRWEWGEEPVQNE----EIVPDLDVRMLKDFEADREAVLEPGDMLYLPPRVAHHGVSLDDECMTYSIGFRAPSHEELIADFMQYAMERIDP-DARYGDPDLTVPDEPGEISADALASIRGLLR----SLTEDDDTIDRWFGAFVTEPKRDR--------------FAMPLPEDVSAGEIAEAIRSGEGLRRGPATN-------------LAFIPH--DDGTASLFANGSEILLGDEIAFAAPLLTGTEFIPSRELTPHLDDD 371
[Close]
BLAST of mRNA_F-serratus_M_contig1037.389.1 vs. uniprot
Match: A0A1V0DGQ7_9BACT (Cupin n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0DGQ7_9BACT)

HSP 1 Score: 301 bits (772), Expect = 5.570e-94
Identity = 185/418 (44.26%), Postives = 241/418 (57.66%), Query Frame = 2 
Query:  254 DRFLLEFWQKKPLLIRRAVSGFSTVLSKDELAGLACCPDVESRIVSGGKMVPEAGKD--WEVMLGPFEEQVFSELGNTHWTLLVNEVNRHVPEVSDLLGKFRFVPSWRVDDVMVSYAPEGGSVGPHVDSYDVFLLQGSGKRRWAIEGSRTSGEVEKARSVQDVDVRVLADFKEDQAWVLEPGDALYLPPRVAHYGVSLDEECMTYSVGFRAPSARDLVAFFGDHVSSTVTKADHFFADPDLRKQINHGLISREAVSRAREIIRQAVLSALDDDDDFDRWFGEHVTRSRRDHTGYPVPMDDLEGLSFGYQLPEDVTSAIRRAYRKGNTLSAGAGLDNLGPFVYHAEGIT-FAFVEHVGSKGGTTLFVDGNAFPLPAQRAFVASLICKSSRLSPQDLGPALEGEHGTEVEELLHLLLRGG 1498
            ++FL E+WQKKPLLIR A+ GF++ LS  +LAGLAC  +V SR+V       E G D  W++  GPF  + F  L  THW+LLV EV+R+VPEV+ LL  FRFVP+WR+DDVM+SYAP+ G VGPHVD+YDVFLLQG G RRW I  +     VE+   V D+DVR+LADF+ D  WVL PGD LYLPPR+ H G++ +++CMTYS+GFRAPS  +L+  F  HV         + ADPDLR     G IS EA++R    IR  +     D+   DRWFG  +T  +R   G+    DD+         P ++  A+R    +G TL              H   I   AF+ H  + G  TLF  G    L A  AF A LI  +  L  + L P L+ E   +V +LL  L+  G
Sbjct:   15 EQFLAEYWQKKPLLIRGALPGFTSPLSPQDLAGLACEEEVISRLVL------ERGGDYPWQLHYGPFSPEDFEALPETHWSLLVQEVDRYVPEVAALLEHFRFVPNWRIDDVMISYAPKHGGVGPHVDNYDVFLLQGLGHRRWQIHHT----PVEEEHLVPDLDVRILADFEPDAEWVLAPGDLLYLPPRIPHNGIA-EDDCMTYSIGFRAPSTVELLEGFLSHVIEHANPGRRY-ADPDLRPPAEPGAISPEALAR----IRSMITEVFQDEQTIDRWFGRFMTEPKR---GFQPGPDDVWD-------PAELADALR----EGATL--------------HRYAIAQLAFIRH--ADGSATLFAGGAEHRLSADLAFAAPLITGTEPLDVRTLAPHLDHE---DVLDLLTTLVNDG 383
[Close]
BLAST of mRNA_F-serratus_M_contig1037.389.1 vs. uniprot
Match: A0A3B1BES7_9ZZZZ (JmjC domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A3B1BES7_9ZZZZ)

HSP 1 Score: 301 bits (771), Expect = 8.350e-94
Identity = 169/416 (40.62%), Postives = 243/416 (58.41%), Query Frame = 2 
Query:  257 RFLLEFWQKKPLLIRRAVSGFSTVLSKDELAGLACCPDVESRIVSGGKMVPEAGKDWEVMLGPFEEQVFSELGNTHWTLLVNEVNRHVPEVSDLLGKFRFVPSWRVDDVMVSYAPEGGSVGPHVDSYDVFLLQGSGKRRWAIEGSRTSGEVEKARSVQDVDVRVLADFKEDQAWVLEPGDALYLPPRVAHYGVSLDEECMTYSVGFRAPSARDLVAFFGDHVSSTVTKADHFFADPDLRKQINHGLISREAVSRAREIIRQAVLSALDDDDDFDRWFGEHVTRSRRDHTGYPVPMDDLEGLSFGYQLPEDVTSAIRRAYRKGNTLSAGAGLDNLGPFVYHAEGITFAFVEHVGSKGGTTLFVDGNAFPLPAQRAFVASLICKSSRLSPQDLGPALEGEHGTEVEELLHLLLRGGFV 1504
            RFL ++WQK+PL ++ A+  F++ +S DELAGLAC  +VESRIV    +  +  + W + +GPF+++ F+ L  THWTLLV E N+++PE+  LL +F F+P+WR+DD+MVSYAPE GSVGPH+D YDVFL+QG G RRW I     + +      + D+D+R++ DF+    WVLEPGD LYLPP VAHYGV+LD+ CMT+SVGFR P+  +L+  F D ++S +     +  DPDL  Q + G I+  A +R R IIR    S + DD   D+WFG ++T S+   T  P P   L    F  QL                  +AGA        ++ +E   F+F++    +   TLF+DG  +PLP   A   + +C   +++  + G AL  E  T    LL  L   G++
Sbjct:   15 RFLADYWQKQPLRVKNALPDFTSPISPDELAGLACEDEVESRIV----LERDGPQPWALRIGPFDDEHFAHLPETHWTLLVQECNKYLPELITLLEQFNFIPNWRIDDIMVSYAPEHGSVGPHMDQYDVFLIQGLGHRRWQISTDPVAAD----NVIPDLDLRIMRDFQATDEWVLEPGDMLYLPPGVAHYGVALDD-CMTFSVGFRTPTVSELLTGFLDEIASELNDHQRYH-DPDLPLQTHPGEITAGARARIRRIIR----STMADDAAIDQWFGRYITESKSGQTATP-PAQPLSTDEFLQQLH-----------------AAGA--------LWRSEYARFSFIDDAADE--ITLFIDGQTWPLPRALAKHVTRLCDQRQITNDEFGKALHDEPFTR---LLTQLYNAGYI 385
[Close]
BLAST of mRNA_F-serratus_M_contig1037.389.1 vs. uniprot
Match: A0A2T2UN41_9BACT (Cupin domain-containing protein n=3 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A2T2UN41_9BACT)

HSP 1 Score: 296 bits (758), Expect = 7.500e-92
Identity = 183/422 (43.36%), Postives = 244/422 (57.82%), Query Frame = 2 
Query:  242 EKDHDRFLLEFWQKKPLLIRRAVSGFSTVLSKDELAGLACCPDVESRIVSGGKMVPEAGKD-WEVMLGPFEEQVFSELGNTHWTLLVNEVNRHVPEVSDLLGKFRFVPSWRVDDVMVSYAPEGGSVGPHVDSYDVFLLQGSGKRRWAIEGSRTSGEVEKARSVQDVDVRVLADFKEDQAWVLEPGDALYLPPRVAHYGVSLDEECMTYSVGFRAPSARDLVAFFGDHVSSTVTKADHFFADPDLRKQINHGLISREAVSRAREIIRQAVLSALDDDDDFDRWFGEHVTRSRRDHTGYPVPMDDLEGLSFGYQLPEDVTSAIRRAYRKGNTLSAGAGLDNLGPFVYHAEGITFAFVEHVGSKGGTTLFVDGNAFPLPAQRAFVASLICKSSRLSPQDLGPALEGEHGTEVEELLHLLLRGGFV 1504
            E+    FL  +WQ++PL++R A+    + LS  ELAGLAC   VESRI+     + E G+  WE+  GPF ++ F +L  THWTLLV EV+R +PEV  LL  FRF+P WR+DDVMVSYAP  G+VGPH+D+YDVFLLQG+G RRW I     + E      V D+DVR+LADF+ D+ +VL PGD LYLPPRVAH+GV+ D++CMTYSVGFRAP  +DLVA F  H   TV   D  ++DPDL    + G +   A  + R ++R+ V     DD   D+WFG+ +TR  R+     VP +     S       D+T A+R          +G GL   GP          AF+EH    G  TLF++G+A  L    A+ A L+    ++   DL P L+ E      ELL  L+  G +
Sbjct:   13 ERSPAEFLDTYWQERPLVVRDALPDVRSPLSPQELAGLACEEGVESRII-----LEEGGEHPWELREGPFAQEAFLDLPETHWTLLVQEVDRLIPEVGALLDHFRFLPDWRLDDVMVSYAPTHGTVGPHIDNYDVFLLQGAGHRRWQIGTEPVADE----EIVPDLDVRILADFEPDEEFVLGPGDLLYLPPRVAHHGVATDDQCMTYSVGFRAPRHQDLVANFLQHAIETVDP-DARYSDPDLTPVDHPGELQDGAREKVRGLLRELVR----DDATVDQWFGQFLTRPDRNREA--VPPETAVSAS-------DLTEALR----------SGRGLRR-GPVA------RLAFIEH--DDGSATLFLNGDAKDLDPDLAYAARLVTGREQIPADDLIPHLDDE---AFVELLARLVNEGLL 389
[Close]
BLAST of mRNA_F-serratus_M_contig1037.389.1 vs. uniprot
Match: A0A433IGC8_9GAMM (Cupin domain-containing protein (Fragment) n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A433IGC8_9GAMM)

HSP 1 Score: 295 bits (755), Expect = 1.400e-91
Identity = 177/419 (42.24%), Postives = 236/419 (56.32%), Query Frame = 2 
Query:  263 LLEFWQKKPLLIRRAVSGFSTVLSKDELAGLACCPDVESRIVSGGKMVPEAGKDWEVMLGPFEEQVFSELGNTHWTLLVNEVNRHVPEVSDLLGKFRFVPSWRVDDVMVSYAPEGGSVGPHVDSYDVFLLQGSGKRRWAIEGSRTSGEVEKARSVQDVDVRVLADFKEDQAWVLEPGDALYLPPRVAHYGVSLDEECMTYSVGFRAPSARDLVAFFGDHVSSTVTKADHFFADPDLRKQINHGLISREAVSRAREIIRQAVLSALDDDDDFDRWFGEHVTRSRRDHTGYPVPMDDLEGLSFGYQLPEDVTSAIRRAYRKGNTLSAGAGLDNLGPFVYHAEGITFAFVEHVGSKGGTTLFVDGNAFPLPAQRAFVASLICKSSRLSPQDLGPALEGEHGTEVEELLHLLLRGGFVYPADD 1519
            L E+WQKKPLL+R A  GF   LS +ELAGLAC   VE+R+V    +  +    WE+  GPF E  F  L ++HWTLLV +V +H P+++ LL  FRF+P WR+DD+M+SYA   G+VGPHVD YDVFLLQG G+RRW I    +S  VE    + D ++R+L DF  +Q W+LEPGD LYLPPR+AHYGV+L + C+TYS+GFRAPS R+L++ F + +   V  AD  + DPDL  Q N G I   A+SR R ++RQA+     DD+    W G +++         P P    E     Y   E     +R   R G  L    G      F Y AE            +G   LFVDG  F L    AF+A L+C+   L+P  L  AL+     +  +LL  LL  G++   +D
Sbjct:    1 LAEYWQKKPLLVRGAWPGFVNPLSPEELAGLACEEGVEARLV----LERDGAAPWELRHGPFSEADFLSLPDSHWTLLVQDVEKHAPDLAALLEPFRFIPDWRIDDLMISYAAPAGTVGPHVDDYDVFLLQGQGQRRWQI----SSRNVEADNCLPDTELRILRDFTAEQEWILEPGDLLYLPPRIAHYGVAL-QPCLTYSIGFRAPSHRELLSGFAEFLVDNVD-ADARYTDPDLLLQENPGEIGLAALSRLRGLLRQAITL---DDETLTVWLGRYLSE--------PKPGFRAEPEEEPYSEAE-----LREYLRGGGVLERNPG----SRFHYIAE-----------PEGEVLLFVDGQEFALGPAVAFMAPLLCRYRSLTPARLREALKQ---ADARQLLLDLLNDGYLLIYED 375
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1037.389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEP9_9PHAE1.340e-23270.31Bifunctional lysine-specific demethylase and histi... [more]
A0A836CR86_9STRA1.500e-16054.99Bifunctional lysine-specific demethylase and histi... [more]
A0A836CPF2_9STRA9.760e-11452.42Bifunctional lysine-specific demethylase and histi... [more]
A0A2T2SBG2_9BACT3.910e-9544.23Cupin domain-containing protein n=3 Tax=unclassifi... [more]
A0A317MUE7_9GAMM1.920e-9442.3850S ribosomal protein L16 3-hydroxylase n=1 Tax=Pl... [more]
A0A2A8D074_9BACT2.980e-9444.28Cupin n=1 Tax=Longibacter salinarum TaxID=1850348 ... [more]
A0A1V0DGQ7_9BACT5.570e-9444.26Cupin n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0... [more]
A0A3B1BES7_9ZZZZ8.350e-9440.63JmjC domain-containing protein n=2 Tax=root TaxID=... [more]
A0A2T2UN41_9BACT7.500e-9243.36Cupin domain-containing protein n=3 Tax=unclassifi... [more]
A0A433IGC8_9GAMM1.400e-9142.24Cupin domain-containing protein (Fragment) n=1 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1037contigF-serratus_M_contig1037:96907..106131 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score607.1
Seed ortholog evalue7.5e-171
Seed eggNOG ortholog2880.D7FJ65
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Cupin superfamily protein
EggNOG OGs2S0FU@2759,COG2850@1
Ec32 ortholog descriptionSecreted cupin domain protein
Ec32 orthologEc-10_000260.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size1689
Cds size1491
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1037.389.1prot_F-serratus_M_contig1037.389.1Fucus serratus malepolypeptideF-serratus_M_contig1037 96938..105964 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928848.4967725-UTR-F-serratus_M_contig1037:96906..969371622928848.4967725-UTR-F-serratus_M_contig1037:96906..96937Fucus serratus maleUTRF-serratus_M_contig1037 96907..96937 +
1690962599.3119633-UTR-F-serratus_M_contig1037:96906..969371690962599.3119633-UTR-F-serratus_M_contig1037:96906..96937Fucus serratus maleUTRF-serratus_M_contig1037 96907..96937 +
1622928848.7302315-UTR-F-serratus_M_contig1037:105964..1061311622928848.7302315-UTR-F-serratus_M_contig1037:105964..106131Fucus serratus maleUTRF-serratus_M_contig1037 105965..106131 +
1690962599.4354887-UTR-F-serratus_M_contig1037:105964..1061311690962599.4354887-UTR-F-serratus_M_contig1037:105964..106131Fucus serratus maleUTRF-serratus_M_contig1037 105965..106131 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928848.5153923-CDS-F-serratus_M_contig1037:96937..972211622928848.5153923-CDS-F-serratus_M_contig1037:96937..97221Fucus serratus maleCDSF-serratus_M_contig1037 96938..97221 +
1690962599.323428-CDS-F-serratus_M_contig1037:96937..972211690962599.323428-CDS-F-serratus_M_contig1037:96937..97221Fucus serratus maleCDSF-serratus_M_contig1037 96938..97221 +
1622928848.5536568-CDS-F-serratus_M_contig1037:99981..1001231622928848.5536568-CDS-F-serratus_M_contig1037:99981..100123Fucus serratus maleCDSF-serratus_M_contig1037 99982..100123 +
1690962599.3330498-CDS-F-serratus_M_contig1037:99981..1001231690962599.3330498-CDS-F-serratus_M_contig1037:99981..100123Fucus serratus maleCDSF-serratus_M_contig1037 99982..100123 +
1622928848.5676358-CDS-F-serratus_M_contig1037:101467..1015361622928848.5676358-CDS-F-serratus_M_contig1037:101467..101536Fucus serratus maleCDSF-serratus_M_contig1037 101468..101536 +
1690962599.3435047-CDS-F-serratus_M_contig1037:101467..1015361690962599.3435047-CDS-F-serratus_M_contig1037:101467..101536Fucus serratus maleCDSF-serratus_M_contig1037 101468..101536 +
1622928848.58067-CDS-F-serratus_M_contig1037:101780..1019091622928848.58067-CDS-F-serratus_M_contig1037:101780..101909Fucus serratus maleCDSF-serratus_M_contig1037 101781..101909 +
1690962599.3553705-CDS-F-serratus_M_contig1037:101780..1019091690962599.3553705-CDS-F-serratus_M_contig1037:101780..101909Fucus serratus maleCDSF-serratus_M_contig1037 101781..101909 +
1622928848.5949621-CDS-F-serratus_M_contig1037:102695..1028121622928848.5949621-CDS-F-serratus_M_contig1037:102695..102812Fucus serratus maleCDSF-serratus_M_contig1037 102696..102812 +
1690962599.3674867-CDS-F-serratus_M_contig1037:102695..1028121690962599.3674867-CDS-F-serratus_M_contig1037:102695..102812Fucus serratus maleCDSF-serratus_M_contig1037 102696..102812 +
1622928848.6135745-CDS-F-serratus_M_contig1037:103362..1034371622928848.6135745-CDS-F-serratus_M_contig1037:103362..103437Fucus serratus maleCDSF-serratus_M_contig1037 103363..103437 +
1690962599.377044-CDS-F-serratus_M_contig1037:103362..1034371690962599.377044-CDS-F-serratus_M_contig1037:103362..103437Fucus serratus maleCDSF-serratus_M_contig1037 103363..103437 +
1622928848.6276624-CDS-F-serratus_M_contig1037:104204..1043461622928848.6276624-CDS-F-serratus_M_contig1037:104204..104346Fucus serratus maleCDSF-serratus_M_contig1037 104205..104346 +
1690962599.386513-CDS-F-serratus_M_contig1037:104204..1043461690962599.386513-CDS-F-serratus_M_contig1037:104204..104346Fucus serratus maleCDSF-serratus_M_contig1037 104205..104346 +
1622928848.6481514-CDS-F-serratus_M_contig1037:104764..1048791622928848.6481514-CDS-F-serratus_M_contig1037:104764..104879Fucus serratus maleCDSF-serratus_M_contig1037 104765..104879 +
1690962599.397224-CDS-F-serratus_M_contig1037:104764..1048791690962599.397224-CDS-F-serratus_M_contig1037:104764..104879Fucus serratus maleCDSF-serratus_M_contig1037 104765..104879 +
1622928848.6668668-CDS-F-serratus_M_contig1037:105125..1053461622928848.6668668-CDS-F-serratus_M_contig1037:105125..105346Fucus serratus maleCDSF-serratus_M_contig1037 105126..105346 +
1690962599.4072154-CDS-F-serratus_M_contig1037:105125..1053461690962599.4072154-CDS-F-serratus_M_contig1037:105125..105346Fucus serratus maleCDSF-serratus_M_contig1037 105126..105346 +
1622928848.7140234-CDS-F-serratus_M_contig1037:105767..1059641622928848.7140234-CDS-F-serratus_M_contig1037:105767..105964Fucus serratus maleCDSF-serratus_M_contig1037 105768..105964 +
1690962599.4195728-CDS-F-serratus_M_contig1037:105767..1059641690962599.4195728-CDS-F-serratus_M_contig1037:105767..105964Fucus serratus maleCDSF-serratus_M_contig1037 105768..105964 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1037.389.1

>prot_F-serratus_M_contig1037.389.1 ID=prot_F-serratus_M_contig1037.389.1|Name=mRNA_F-serratus_M_contig1037.389.1|organism=Fucus serratus male|type=polypeptide|length=497bp
MLPKYLLLLLSLLLSRRVSAFLPQAPLVGGVARLLIQRPPRGGVGVVQQA
TAENALGEVSAAAEVWESFEEKDHDRFLLEFWQKKPLLIRRAVSGFSTVL
SKDELAGLACCPDVESRIVSGGKMVPEAGKDWEVMLGPFEEQVFSELGNT
HWTLLVNEVNRHVPEVSDLLGKFRFVPSWRVDDVMVSYAPEGGSVGPHVD
SYDVFLLQGSGKRRWAIEGSRTSGEVEKARSVQDVDVRVLADFKEDQAWV
LEPGDALYLPPRVAHYGVSLDEECMTYSVGFRAPSARDLVAFFGDHVSST
VTKADHFFADPDLRKQINHGLISREAVSRAREIIRQAVLSALDDDDDFDR
WFGEHVTRSRRDHTGYPVPMDDLEGLSFGYQLPEDVTSAIRRAYRKGNTL
SAGAGLDNLGPFVYHAEGITFAFVEHVGSKGGTTLFVDGNAFPLPAQRAF
VASLICKSSRLSPQDLGPALEGEHGTEVEELLHLLLRGGFVYPADD*
back to top

mRNA from alignment at F-serratus_M_contig1037:96907..106131+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1037.389.1 ID=mRNA_F-serratus_M_contig1037.389.1|Name=mRNA_F-serratus_M_contig1037.389.1|organism=Fucus serratus male|type=mRNA|length=9225bp|location=Sequence derived from alignment at F-serratus_M_contig1037:96907..106131+ (Fucus serratus male)
GCTTACCATTGCCACATCACGACCTCTGAAAATGTTGCCAAAATACTTGC
TTTTACTTTTGTCGCTGCTTCTAAGCAGAAGAGTCAGTGCATTTCTTCCA
CAAGCTCCGCTTGTTGGAGGCGTGGCAAGGCTACTTATTCAACGTCCACC
GCGTGGGGGTGTCGGGGTTGTGCAACAAGCAACAGCCGAGAACGCTTTGG
GTGAGGTGTCGGCAGCAGCGGAAGTGTGGGAAAGCTTCGAGGAGAAAGAC
CACGACCGTTTTCTTTTGGAGTTCTGGCAGAAGAAGCCCTTACTCATCCG
ACGCGCTGTCTCCGGGTATGCTCCACGTTAGCGTTACACACAAAAAAGCA
TGTCTGAAACGTCTACTACTGTTGATGTATGTATGGTCACATATATACTA
CTGTACGTATGAAATTACAGGTGGAAATCATGAACACCCGCATCTTCGTT
GAAATCGATAAATTCCACTGGTATCACCGCATAGGGAAAGATAACATCGG
ATTGGCACGAGGCGCTGGCTGGCCGTGAGATATATGTAGACACATGAAGG
GAATATTATTCCGCTACGTCAAGCGCGTGACCCTCCTTCTTCTTCGTTCC
CTTAACATGCGTTCAATCAACATATACTTATGTATGTACTGGTATGTATG
TATGGTCACACGTATAGCAAGAGTATGGATCAACCGTGTAAGGGTGCCAA
TCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAATGTTTTCCTGTCTGCG
TTCACGCCTGAGAATTTGGCGTCGCGAGACGGGACTCATCCCCATAATCA
GGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGC
GTCCATTTACTTATATTAAACCGCCATACGCCATCGGGTCAGTCCAGAGT
TTATCGGGTCACGCAATTTCGTACCGATGGCGTTCACTGCCGAGAGTCCG
CGGGCATACGGCCAGTAAACCTCAAGGTAGTTCCGAACTGGTGCTGCCTT
GGCAGGTCACCATGGGTTAATTAATATGCGCCTCTACCCACATCCACTAT
TGGTCGCCCCGGTAGCTCAGAGGTACCTCGTAACCTTCTGACACGTTGGG
ACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTCACTAAAAACTAAAAA
CTAAAATAAAAATGCCCAACGGGTGGAGAACGATTAATTCGTTAGTACAC
AAAATTCGACTTTACGGTCGACAAGGGAAAGAAAGGGAAGGCTGAATCCT
TCTCGCGATAAAAATTAAGGCGCGCACCGCAGAAGGAAGGTGGATGAAAA
ATCCTGTGTGGCCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCATTGAT
GTCCAAAATGGATGGGAAGAAACACAAACACACACACACACACACACACA
CTACTGTGCACAAACAACGACGGTATAACATAATATTAATAACGTACAAG
TGTAGCTCTCGAGCAATAGTCTAGTCTACAGTACTTCCTTCTGCCCCCTA
TAAAGTACCATGTAGTCGACTCGTAGAGTATAACACCTATTTATACTCTG
CCCAGGTACATATGTCTGAGAATAACTGGTTGGTATAACGCCGGTACTTT
CAACATGCCCACTTCATACCAATAGTGGGTGTTGGAAAGATAGGCGTATA
TTATTTGATCCATGGTGACCTGCTAAGGCTGCACTCGTTCGGAACTACCT
TGAGGTTCACTGGCCCTGTTCCGGCGGACTCTCGGCAGCGGACGCCATCG
GTACGCCATTGCGCGACCCGATAAACTTAGAACTTACCCGATTGAATATA
AATATATGGACGCTGCCGCGGAACTCGGGAGGAATCCCGTTAGTAAACAC
TAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGGCTG
CTGAAACCGTCTCGCTAGACCAAATTCTCAGGCACGAACGCGGACAGAGG
AATATTATTTTCCTTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTAC
CAGGTTGATCCATACTCTTGCTATATGTGGGGCCATACATACATCTAGAA
GGGAAATGCGCGAAACTACTCGAAATCAAATAGAATGGTGTCTGGCGGTT
AGGGGAGAAATAAAAAATATCTTTGGGTAACCAGGGGATGTTTGAACAGC
TTCCCCGGGCTAGACAGGGGATGCAATATTTATTTCTGCCACACGACCGA
AGTGGCGCTTGTTAAGATGGCGGTTGTTGCTGCAGTTCAACAAGTCATCA
AACGCAGTCCGCCGCTCTGCTGCTGTTGGAATCGTGTAGGGCACCGTTTG
GGCTGCGGGTTCAGCGCTAGACACTGCTGAGTTGATGATGAGAAGGTTTG
CAACCGGGAATCCGCGTAAGCGAGATCTGAGTACTTGCGTCTGGCGACTT
TGGTGCTTGTCTAGAGCATGTGTCTCGAAAGAGGTAAAAATGGCAGATGC
GGTGAAATCGCGTAGAACCTGATAACAAAAAATGTTGTAAAAAAAACATT
TTACAGCAGGAGTTATACCGCAAAATGTCCATACCGGTCAATCATTACCG
GACAAACGTTTTTTTACACTTTTCCCGCGTACTGGGCGGATGCTCAGAGG
GTTTAGATGCGTTCCGATTTTATTTAAACAGTAGGATCACGTCTTGTAGC
TGTGTGTGTTTTGTATCCCCACTTTCGCCCAAAGCCCCAACATGCCGGCT
TACCAACCCCACCTACTGCAACGTTGCCATCCTGCATCCTGCATGTATTC
GCGAAAGATCTCCCCATCTCTCCCCGCTTATCACCTAGAATGTTCTACCG
CGATGCAGGATCAGGACTCCTACGCCTCGTGAAGAAGTGTTTAGTTGTTT
TTACTGCACTCCGTTTTCACGCTCTCCGCTCCCGAAATCAAAACAGAAAT
CATGCTGTCAAAATTCGATCTCACAAAATCCGCGCTATTAATATAAATAT
TATAGTGAACTGCGAGGTTATACACTACTCCGCCCGAGCGACGAGTTGAC
GCCTGTCCGACTCCCACGCCCCTCGCCACTACGATACTTCTATCCTCCAT
TGCTCGGTGGCTGACCGTAACCAAGGTTTTCCACAGTCTTATCAAAGGAT
GAGCTCGCGGGCTTGGCGTGCTGTCCAGACGTCGAAAGTCGCATCGTCTC
AGGAGGGAAGATGGTGCCGGAGGCGGGGAAAGACTGGGAGGTGATGCTCG
GTCCCTTCGAAGAACAGGTGCTAACTGATGGACACGAATCGCGATCTCCT
TGTTTGTGATATGTTAGAGCCGCAAGTTTCCAGGGAATCTCCATGTCTAG
ACCCGACTCCTGTGGTGAATGCTATTGCAAGTACAGTATGGTATACGTGC
CTCTTTAAGAGGCTACGGTAAGTCCCTGCCTCGCAAGATACATGCCACGT
ACTGTACTTTGTCGTAGGCTCGGTTTTCTCAAGGAATGCCCAACCGCTGT
CGAATGTTCCGCATGGTCTCGTGATGTTGCCCGGACAAATTTTCTCGTCG
CAACCGTTTCGTGTACCATAGGAAGGTGTAGTTTTATGTCAGATATCGCT
CTATTAATAGTATCGTTCTCGAGGACATGTTCCTAGAATCTAATATGTTT
TACAGTGTAAGTAATACGGCGGCCGTACAGTGCTTTGAATCGGCCTTGCA
GTTCGCCGATCGAAGTAGAATATGGCAACTCCAGAGATTGAGATGCCTCT
TGACAGAAGCCAAACTGGATGCGCTCCTACTATTTCTCTCTGGTGGTTGA
CGGCCAATTGCTCCTTGAGCCTTTGTGATTTTCGCGTCGATTTCGTAGAC
TTGCGGACAATGTGTGTATGTATGGTCACACGTATAGCAAGAGTATGGAT
CAACCTGGTAAGACTGCTAATCCTGCTCGTGGTCAGCTGAACAGGGAAAA
TAATATTCCCCTGTCCGCGTTCGTGCCTGAGAATTTGGTCTCGCGAGACG
GTTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCAGGCT
GAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGCGTCC
ATATATTTATATTAAACCGCCATACGCCATCGGGTAAGTCCCGAGTTTAT
CGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAGTCCGTCGG
CACAGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGCCTTAGCA
GGTCACCATGGAACAATTAATATACGCCTCTCTTTCCCACACCCACTATT
GGTATGAAGTGGGCATGTTGAAAATAGCGGCGAAAATATTGTCCGCCGAT
TGGTTGGTGTGAAAAGTCTGCCCACAAATCTTGAGCTTGCTGGCCACGTG
AGTACACAGCCGCAGAATACGCTGTCAACAGTTCTAACTCACTTTGCCTC
GAACAGTCGAAACCGTTTTGCAGTGTTAAGCATTTTCAAAACCGCGACAT
GCATGAGAATACTTGCTGACCCATTCGACGACACCTTGGTGGCGTTTTCC
ATTGTCCCTCATGTCCGATTTTATTTCGTTTTTTGGATGGCGCGATTGTC
CGAGGTCTCAGGTGTTTTCCGAGCTTGGAAACACGCACTGGACGCTCTTG
GTAAACGAGGTTAACCGACATGTGCCCGAGGTTAGGAGTAAAAACGTCGC
GGTTCGTACCGTCGTAGAGCGCCGATATAATAGAGCTCAAAATCGCACGA
TAATGCGGTCGCAGCAGTCCTGGGCGCGTTTGAAGGGCGTCGCGTAGTTT
GAAGGTACGCTACACATGCCTCGCTAGCGTACGAACCAGCTTCAATCGTC
TAAAGAGGCAGCAACTATCAAGAACTTGATGCGCACAGCCCAGTGTGTCT
GTTGTTGATTTTTTTTCTCTGCAGGTTTCGGACTTGCTTGGCAAGTTCCG
ATTTGTGCCCTCGTGGCGAGTCGATGATGTCATGGTCAGCTACGCTCCCG
AAGGTGGTTCTGTTGGCCCCCACGTCGACAGCTACGACGTTTTTCTTCTC
CAGGTTAGTGAGCCTATTGTCTCTGGCACCCGCATTGCGATGCTGGCGAG
CAATAAGACGGGGCTTAACAGGACACGATCGAGCCGAAAAATTGTGCTTC
AAAGGAATGGCATTCACAGTGTTTATGAACGACAAAATAGAATGAAACGA
CGGGAAAAACTGTTCCAGTATACCACCGCCTTCTCTCCGTGTCGGTTTTC
GCTGCAGTCGGTAATGCTCGATTAAAGATTTACTCTCGGTAATGGCGCGT
GCCCAAGGTTTGGCGCCGATCCCCCCCCCCCTTCCCCTTGCGTGTGTACA
CCTCGTGTTAATAGTGTTAATAGTATTAATAGTTGCCGTAGTTCTACACC
TCTTGCCGAAGAGTGACTCCATCAAAGGTCTCACATGAAACGACCGAGAT
ATAGGTTGAGGCGATCGACGCTGGCGCAAAAATAAATACCTGGGTAGTAC
TTTCCCACGCTGTACCCCCTGCTTATGCCGAGAGTGGGTAGCATACCGCT
TTATTGTCTGCTGCCTTGAAGAGTACTCGCCTACGGCTTCCTGGTGTGTA
ACCGCTTCGGTTCCGTACGGACTGTCAGAGTACGATCCGTCCATCGAATT
CTTCGTAAAGAGAAAAAATCGTTCTCGGCTTCTGTACTCTTTTTGTTTTT
ATTATAATAGGTACCATACACACTGCGAGAGCGGGAGTGACCGTCGTGTA
CAGTACGGCAGTGTAGCTTGAGTTTCCACGCTGAGCACGAAAACAATCAA
CTTTCTGTTTCACCACGCATCGTCTCAATTGCATCCCAGGGGTCTGGTAA
GCGACGATGGGCGATCGAGGGTTCGCGAACGTCGGGCGAGGTGGAAAAAG
CACGATCAGTGCAGGACGTCGATGTTCGGGTGCTGGCTGACTTCAAGGAG
GATCAGGTAGGTTTGCTTTGTTCTTGATACCAGGTAGTCTCTTTGTTCAA
TCATTCAATCGTGGAGATAAGTTAGGTACCCACCCGCTAGCCGACCAGCC
AAGCTAATAAAATAGGGCGTTGGGTTTTTGTTTTAGTTGTAGATTAAACG
TCGCTTGTCCCAGCCTTAGGAAACCCAATCTGTGTATCGGATAATATTAT
CCAATCGGAAACGCGACGGTTGCCCTCTCGATATACAAAAAAGTTAAAAG
TTTGAACTAGGTAGATTCGAGGAGAGTACCATGCTCTCACTCGACAGAAG
CTGCATCTCTGACAAGGACACACGGCCCCGTTGACCAAGAGTAGAAAGCC
AATGTGAAAGGTTGGTCTCGGAAGTTAGCGCGCGGTGCTTTCAACCTAAA
GGCATCGATTTCATCCATCAAGCTTGTTTTCTAAATTCACCCTAGTGCCT
GTGACTCACTCACTGATATTTACCATTGTAGTTTGCATCTCTTATCCAGG
CAGCGACTGTTTCATAAATGCTGCCATGCGTTCTCTCCATTCACACTTTG
TTTCAGGCCTGGGTGCTCGAACCTGGGGATGCCCTTTACCTTCCTCCGCG
CGTCGCTCACTATGGTGTAAGTCTTGACGAGGTGAGGAGTCCCATAGTGT
TGATACACTGCAACGCCGGAACCTTGTGCCTACATTTCCCTGCTCATGAA
AGAAGTGCTAGTTTGCGGCGTTCGTGTAGCATCTGTCCGAGTAAAAATCT
TGACTACACCATGCCCATGCCGACGACGTAACCGAAAACGTAGTACGAAA
CACGGATCGTAGCGAAAGCTCCTCACATTTCTCAATACAGAACGAGATAG
CTAGGCACCTATTAATAGCTATAGCTACACCTCCGAGACTCCCTGAAGAA
AACAAACAAACCAAGTCGGCGTGGACGGAAGGAAGGGCGACGTCTCTTCA
CAAGTCATCAGTTGAACGCACGTGTCTCATCGAGATTTCGTTCTTCAATG
TTGAGGCCCATCGGCTATATGTGAGATGAAACAATAAAAATGAAAATGGT
GACACCTCTGAAACACCCTGAAGAAAAAGGAAACACGTAGTCGGCATCGA
CGGTAGGGAGGGCAAAAGCTCCACACTCAAGCCATCGATTGACCGTACGT
GTTCTTTATACCGGTCGATTCTACTGTCGTCGGGATAATGTTATTCAACG
GTGGTTCGTATTATCGACAGTGGTGCCCGATATTTCAATCTTCGCTCGTT
TCTTCGAAATGAATCAATTCCAACTGCTATACGACCAACAGAGTTGTAGA
TAGTGACTTATATTTTCATTCTATGCTGAATACTAATTCCGGCCGATCGC
CCGATAGCAATCAAATCGCCTGCGCCCCCTTCTCCTGTCTGGCTATAGGA
GTGCATGACATACTCCGTCGGATTCCGAGCCCCTTCAGCCAGAGACCTTG
TGGCCTTTTTCGGCGACCACGTGTCCTCGACGGTAACGAAGGCCGACCAC
TTCTTCGCAGACCCCGATCTTCGGAAGCAAATCAATCACGGTGAGGGTAT
TGCCCCAGGTAAAGCAAGAGAGATCACAGATGTTTTGCCAAAGTTTGTTT
CGCTTCACACTATGTTGTTTGTGATAAGTGTACTATGAACGACGCCGCGC
GTGGTCTAAGTCACTCTTTGTTTATTTTATGAGTAGCAAGGGATGAAATG
AGTTGTTACGTTCCTGCAGGAGAGTGCCAGCGTTTTCGCCGGCACCAAGA
TCTCATCTTGAAGACCGAATGCGCCTATAAAACTGGGGTTGGGTTGTGCG
CGACAAGAATACGCCTTCCTGCCGTGGATCCTGCTCGGTTCGAGCTTTCC
AGAACATTTACCGGCGCATCTGATCGCCATCATCGGCCGCCACACGTGGT
AACCCCCCTCCCATCCTTTGCACCCTTCCCGCTTCTCCGACCGAAAATAA
CGATGCAGGGTTGATTTCGAGGGAGGCCGTATCGAGGGCGAGAGAGATTA
TTCGGCAAGCGGTGCTTTCGGCGCTCGACGACGATGACGACTTCGACCGG
TGGTTTGGAGAGCATGTTACAAGGTCAGAGTCGACGAGTCGAATCCCCCG
ACTTATCTCTCACAGAAGTCAGTAGACATGATTATCGTTTTATATTTTGT
GCGTAGTATAATTGTTTGTGCCGGTATATCTCTGTTCCAAAATAATCGGC
ATAAGTTTAGCTGTCGAAAAGGTGTCGGACAATGGATCTGAGCAGGGACT
CTGCGTCATATTCTCTTTGATGTCTGTCAAGCGGTTTTCACACCATCTCT
GCCACCCCATTTTCATCAGGTCACGCCGAGATCACACGGGGTACCCGGTG
CCGATGGACGACTTGGAAGGTCTGTCATTCGGGTACCAACTCCCAGAGGA
CGTCACGTCGGCGATTCGAAGGGCATACCGTAAGGGGAACACCTTGAGTG
CTGGCGCTGGCCTGGACAACTTGGGTCCATTCGTGTACCACGCCGAGGGA
ATAACATTCGCCTTCGTCGAGCACGTGGGATCCAAAGGAGGTGGGTCAAA
TGGGGACTGATAAGACATTGTTTTTTACTCGACCTCCAAAGTGCACAGCA
GTTTCCCTGATCCACAAAGTGACCTGATGAAACTAAAGTAGATGTGGAGA
GGAAAGTCATGTGTTTACTTGCAAACTGGTTTTGAACAAAATATTTTGAA
GTATAGTTTTACATAGCAACGCTAACGGCTGAGGTTTGAAATGCTTTACC
AGTGGACTCGTGTTACTAATACGCTCTGGCGGTTCTCCAGTCGTCTAGGC
CACCCTTCGAAAATGTCCCGACAGCTTTGAGGCTTGTCTTTCCGTCCTCG
GGAGGCTGAGATTATGATACAAGTGGTTTTCTGTCAACTGTTTCTTGATT
TGAACATATTTGGTTCTATCTCTTGCCGTGCAAAAACTCTTCTGTGACAT
GTTTGGCACAGGGACGACGCTTTTCGTGGACGGGAACGCCTTCCCTCTTC
CAGCACAAAGAGCCTTCGTGGCGAGTCTCATCTGTAAATCGTCGCGTCTG
TCTCCTCAAGACCTGGGCCCAGCTCTGGAAGGGGAACATGGCACCGAAGT
CGAGGAGCTGCTGCACCTATTACTAAGAGGGGGCTTCGTTTATCCCGCGG
ACGATTGACATACTTTGCCGCCGTTCAAAAATACCTGGTACTCAATTAAT
GGGAAAACTCGTGTATCACTGATGAAGCCCGTTCGGTTTGAAACTAACTT
TAAAAGTTTCCGGTAGTTGATTGTATGTTTCGTTTTATGAGAGTGTTCGT
GTTGGCTGCGGCTGGTACCTGTCGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1037:96907..106131+

>mRNA_F-serratus_M_contig1037.389.1 ID=mRNA_F-serratus_M_contig1037.389.1|Name=mRNA_F-serratus_M_contig1037.389.1|organism=Fucus serratus male|type=CDS|length=2982bp|location=Sequence derived from alignment at F-serratus_M_contig1037:96907..106131+ (Fucus serratus male)
ATGTTGCCAAAATACTTGCTTTTACTTTTGTCGCTGCTTCTAAGCAGAAG
AGTCAGTGCATTTCTTCCACAAGCTCCGCTTGTTGGAGGCGTGGCAAGGC
TACTTATTCAACGTCCACCGCGTGGGGGTGTCGGGGTTGTGCAACAAGCA
ACAGCCGAGAACGCTTTGGGTGAGGTGTCGGCAGCAGCGGAAGTGTGGGA
AAGCTTCGAGGAGAAAGACCACGACCGTTTTCTTTTGGAGTTCTGGCAGA
AGAAGCCCTTACTCATCCGACGCGCTGTCTCCGGATGTTGCCAAAATACT
TGCTTTTACTTTTGTCGCTGCTTCTAAGCAGAAGAGTCAGTGCATTTCTT
CCACAAGCTCCGCTTGTTGGAGGCGTGGCAAGGCTACTTATTCAACGTCC
ACCGCGTGGGGGTGTCGGGGTTGTGCAACAAGCAACAGCCGAGAACGCTT
TGGGTGAGGTGTCGGCAGCAGCGGAAGTGTGGGAAAGCTTCGAGGAGAAA
GACCACGACCGTTTTCTTTTGGAGTTCTGGCAGAAGAAGCCCTTACTCAT
CCGACGCGCTGTCTCCGGGTTTTCCACAGTCTTATCAAAGGATGAGCTCG
CGGGCTTGGCGTGCTGTCCAGACGTCGAAAGTCGCATCGTCTCAGGAGGG
AAGATGGTGCCGGAGGCGGGGAAAGACTGGGAGGTGATGCTCGGTCCCTT
CGAAGAACAGGTTTTCCACAGTCTTATCAAAGGATGAGCTCGCGGGCTTG
GCGTGCTGTCCAGACGTCGAAAGTCGCATCGTCTCAGGAGGGAAGATGGT
GCCGGAGGCGGGGAAAGACTGGGAGGTGATGCTCGGTCCCTTCGAAGAAC
AGGTGTTTTCCGAGCTTGGAAACACGCACTGGACGCTCTTGGTAAACGAG
GTTAACCGACATGTGCCCGAGGTGTTTTCCGAGCTTGGAAACACGCACTG
GACGCTCTTGGTAAACGAGGTTAACCGACATGTGCCCGAGGTTTCGGACT
TGCTTGGCAAGTTCCGATTTGTGCCCTCGTGGCGAGTCGATGATGTCATG
GTCAGCTACGCTCCCGAAGGTGGTTCTGTTGGCCCCCACGTCGACAGCTA
CGACGTTTTTCTTCTCCAGGTTTCGGACTTGCTTGGCAAGTTCCGATTTG
TGCCCTCGTGGCGAGTCGATGATGTCATGGTCAGCTACGCTCCCGAAGGT
GGTTCTGTTGGCCCCCACGTCGACAGCTACGACGTTTTTCTTCTCCAGGG
GTCTGGTAAGCGACGATGGGCGATCGAGGGTTCGCGAACGTCGGGCGAGG
TGGAAAAAGCACGATCAGTGCAGGACGTCGATGTTCGGGTGCTGGCTGAC
TTCAAGGAGGATCAGGGGTCTGGTAAGCGACGATGGGCGATCGAGGGTTC
GCGAACGTCGGGCGAGGTGGAAAAAGCACGATCAGTGCAGGACGTCGATG
TTCGGGTGCTGGCTGACTTCAAGGAGGATCAGGCCTGGGTGCTCGAACCT
GGGGATGCCCTTTACCTTCCTCCGCGCGTCGCTCACTATGGTGTAAGTCT
TGACGAGGCCTGGGTGCTCGAACCTGGGGATGCCCTTTACCTTCCTCCGC
GCGTCGCTCACTATGGTGTAAGTCTTGACGAGGAGTGCATGACATACTCC
GTCGGATTCCGAGCCCCTTCAGCCAGAGACCTTGTGGCCTTTTTCGGCGA
CCACGTGTCCTCGACGGTAACGAAGGCCGACCACTTCTTCGCAGACCCCG
ATCTTCGGAAGCAAATCAATCACGGAGTGCATGACATACTCCGTCGGATT
CCGAGCCCCTTCAGCCAGAGACCTTGTGGCCTTTTTCGGCGACCACGTGT
CCTCGACGGTAACGAAGGCCGACCACTTCTTCGCAGACCCCGATCTTCGG
AAGCAAATCAATCACGGGTTGATTTCGAGGGAGGCCGTATCGAGGGCGAG
AGAGATTATTCGGCAAGCGGTGCTTTCGGCGCTCGACGACGATGACGACT
TCGACCGGTGGTTTGGAGAGCATGTTACAAGGGTTGATTTCGAGGGAGGC
CGTATCGAGGGCGAGAGAGATTATTCGGCAAGCGGTGCTTTCGGCGCTCG
ACGACGATGACGACTTCGACCGGTGGTTTGGAGAGCATGTTACAAGGTCA
CGCCGAGATCACACGGGGTACCCGGTGCCGATGGACGACTTGGAAGGTCT
GTCATTCGGGTACCAACTCCCAGAGGACGTCACGTCGGCGATTCGAAGGG
CATACCGTAAGGGGAACACCTTGAGTGCTGGCGCTGGCCTGGACAACTTG
GGTCCATTCGTGTACCACGCCGAGGGAATAACATTCGCCTTCGTCGAGCA
CGTGGGATCCAAAGGAGGTCACGCCGAGATCACACGGGGTACCCGGTGCC
GATGGACGACTTGGAAGGTCTGTCATTCGGGTACCAACTCCCAGAGGACG
TCACGTCGGCGATTCGAAGGGCATACCGTAAGGGGAACACCTTGAGTGCT
GGCGCTGGCCTGGACAACTTGGGTCCATTCGTGTACCACGCCGAGGGAAT
AACATTCGCCTTCGTCGAGCACGTGGGATCCAAAGGAGGGACGACGCTTT
TCGTGGACGGGAACGCCTTCCCTCTTCCAGCACAAAGAGCCTTCGTGGCG
AGTCTCATCTGTAAATCGTCGCGTCTGTCTCCTCAAGACCTGGGCCCAGC
TCTGGAAGGGGAACATGGCACCGAAGTCGAGGAGCTGCTGCACCTATTAC
TAAGAGGGGGCTTCGTTTATCCCGCGGACGATTGAGGACGACGCTTTTCG
TGGACGGGAACGCCTTCCCTCTTCCAGCACAAAGAGCCTTCGTGGCGAGT
CTCATCTGTAAATCGTCGCGTCTGTCTCCTCAAGACCTGGGCCCAGCTCT
GGAAGGGGAACATGGCACCGAAGTCGAGGAGCTGCTGCACCTATTACTAA
GAGGGGGCTTCGTTTATCCCGCGGACGATTGA
back to top