|
Homology
BLAST of mRNA_F-serratus_M_contig1030.349.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI) HSP 1 Score: 545 bits (1405), Expect = 3.790e-188 Identity = 304/453 (67.11%), Postives = 353/453 (77.92%), Query Frame = 2
Query: 92 LSSMVVAYAMASTATTVSAFTP---TVSARSRFVPSARHWTSK--ATSARPSASAGARGLRAVVEPGMLGGVDPVWLHQVFTGIADASGPALDPSSATAATSLLAEGGGLFGTGLNLNPVEFLTAMTETAITGLHDMLQGLGVPSAYGISIIFFTVFVKALTYPLTYQQLASTTKMQALGPKVKELQSRYANNPEAANQAISQLYQTENVNPLAGCLPAIAQIPIFISLYRSLLNLAKENKLTEGFLWIPSLEGPTFDSPPTEMMSWIKEWTDGAPKLGWHDTLAYLTIPVILVLTQSVSMKIMQPAKDPNAPVDDSQQASQNVLKFLPLLIGWFSLSVPSALGLYWILNNFISTTTSVIIRNQIATEMGDPSAGAPKIEFPSLPFGGKESVEGKQDLEGPEILAATVTREGLEDST----SKGF-GGPEVLDAELGGDIVSEDGTPVAAVGA 1420
L+++V A AMA+ A TVSAF P VSARSRFV +A WTS+ A +ARPSAS GARGL+A+V+PGM+ GVDP WLHQV TGIAD D ++A A + G +P++ LT +TE AITGLHD+L +GVPSAYGISII FT+FVK +T+PLTYQQL+STTKMQ LGPKVKELQ+RYANNPEAANQA+ QLYQTENVNPLAGCLPA+AQIPIFISLYRSLLNLAKENKLTE FLWIPSLEGPTFDSPPTEMMSWIK+W+DGAPKLGWHDT+AY+TIP+ILV+TQS+S +IMQPAKDP+ PVD+SQ ASQN++KFLPL+IGWFSLSVPSALGLYWILNNFIST TSV IRNQIA E GDP+ APKI +LPF +E PE++ + RE L DS +KGF P LDAE+ G+IV EDG P V A
Sbjct: 5 LTALVAACAMAN-AGTVSAFAPPGLAVSARSRFV-AANSWTSRSSAPAARPSAS-GARGLQAMVDPGMMHGVDPAWLHQVLTGIADG-----DVAAAVAEEAAXXXXXGF-------HPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIADETGDPNMKAPKI---TLPFMEEE----------PEVVTMPIPREALPDSAVVEETKGFVPTPATLDAEVEGEIVKEDGAPAPPVSA 429
BLAST of mRNA_F-serratus_M_contig1030.349.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA) HSP 1 Score: 370 bits (951), Expect = 6.140e-120 Identity = 210/414 (50.72%), Postives = 271/414 (65.46%), Query Frame = 2
Query: 227 PSASAGARGLRAVVEPGMLGGVDPVWLHQVFTGIADASGPALDPSSATAATSLLAEGGGLFGTGLNLNPVEFLTAMTETAITGLHDMLQGLGVPSAYGISIIFFTVFVKALTYPLTYQQLASTTKMQALGPKVKELQSRYANNPEAANQAISQLYQTENVNPLAGCLPAIAQIPIFISLYRSLLNLAKENKLTEGFLWIPSLEGPTFDSPPTEMMSWIKEWTDGAPKLGWHDTLAYLTIPVILVLTQSVSMKIMQPAKDPNAPVDDSQQASQNVLKFLPLLIGWFSLSVPSALGLYWILNNFISTTTSVIIRNQIATEMGDPSAGAPKIEFPSLPFGGKESVEGKQDLEGPEILAATVTREGLEDSTSKGFGGPEVLDAELGGDIVSEDGTPVAAVGADPKSKPKGATKKRTKK 1468
P+A++G GLRA+ + GG+D LHQVF+G+ADA+ ++A AA A GG+F L TE AIT LHD L+G GV +YG +II FT+F+K +T+PLTYQQLASTTKMQ L PKVK++Q R ANNPEAAN+AI+ LY+ E VNPL+GCLP++AQIPIFISLYR+LLNLAKENKL EGFLW+PSLEGP F +PPTE ++WIK W +G P LGWHDTL YL+IPVILV+TQS+S +++ P K A D SQ +LK+LPLLIGWFSL+VPS LGLYWI+NN +ST SV+IR Q+ +AGA P + +V + L+ + + + G + +KGFG + E D+ E + A + K K KKR+KK
Sbjct: 47 PAATSGVGGLRALAD----GGIDFTVLHQVFSGLADATA-----ATADAAADAAANNGGVFAG---------LVTATEAAITMLHDALKGAGVEQSYGYAIIGFTLFIKGVTFPLTYQQLASTTKMQTLQPKVKDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQIPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKTWENGVPALGWHDTLCYLSIPVILVITQSISQQLISPPKKEGAEADTSQA----ILKYLPLLIGWFSLNVPSGLGLYWIVNNIVSTAASVLIRQQLGLPA---TAGA----TPGVTAEANATVAKAKVLDAEVVKSVSDMAPGTQLEEAKGFGSAAQSEGE---DVQGE----IIAANSSVKPKKSSGKKKRSKK 424
BLAST of mRNA_F-serratus_M_contig1030.349.1 vs. uniprot
Match: W7U5Y4_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y4_9STRA) HSP 1 Score: 293 bits (750), Expect = 4.410e-90 Identity = 152/315 (48.25%), Postives = 208/315 (66.03%), Query Frame = 2
Query: 248 RGLRAVVEPGMLGGV-------DPVWLHQVFTGIADASGPALDPSSATAATSLLAEGGGLFGTGLNLNPVEFLTAMTETAITGLHDMLQGLGVPSAYGISIIFFTVFVKALTYPLTYQQLASTTKMQALGPKVKELQSRYANNPEAANQAISQLYQTENVNPLAGCLPAIAQIPIFISLYRSLLNLAKENKLTEGFLWIPSLEGPTFDSPPTEMMSWIKEWTDGAPKLGWHDTLAYLTIPVILVLTQSVSMKIMQPAK---DPNAPVDDSQQASQNVLKFLPLLIGWFSLSVPSALGLYWILNNFISTTTSVIIR 1162
R L+AVV+PG + V VWL Q G+ADA+ ++ S G + E AIT +H+ L+G G+ + YG+SII FTV VK +T PL Y+Q+ STTKMQA+ PK+KE+Q++Y ++P Q ++QLY NVNPLAGCLPA+ QIPIFISLYR+L NLA N+L E FLW+P+LEGPT+ + P + M+W+K+W P LGWHDT+A+LT+P+IL+++QS+S +I+QPA DPNA Q SQ +LKFLP ++G+FSL+VPS LG+YWI NN I+T T+V +R
Sbjct: 79 RTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVADAAAATAPDTAGAVEGSKEMTGAAXXXXXXXGGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNA------QQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 387
BLAST of mRNA_F-serratus_M_contig1030.349.1 vs. uniprot
Match: K8YSD2_NANGC (Preprotein translocase subunit YidC n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSD2_NANGC) HSP 1 Score: 295 bits (756), Expect = 4.710e-90 Identity = 153/315 (48.57%), Postives = 209/315 (66.35%), Query Frame = 2
Query: 248 RGLRAVVEPGMLGGV-------DPVWLHQVFTGIADASGPALDPSSATAATSLLAEGGGLFGTGLNLNPVEFLTAMTETAITGLHDMLQGLGVPSAYGISIIFFTVFVKALTYPLTYQQLASTTKMQALGPKVKELQSRYANNPEAANQAISQLYQTENVNPLAGCLPAIAQIPIFISLYRSLLNLAKENKLTEGFLWIPSLEGPTFDSPPTEMMSWIKEWTDGAPKLGWHDTLAYLTIPVILVLTQSVSMKIMQPAK---DPNAPVDDSQQASQNVLKFLPLLIGWFSLSVPSALGLYWILNNFISTTTSVIIR 1162
R L+AVV+PG + V VWL Q G+ADA+ ++ S G N + E AIT +H+ L+G G+ + YG+SII FTV VK +T PL Y+Q+ STTKMQA+ PK+KE+Q++Y ++P Q ++QLY NVNPLAGCLPA+ QIPIFISLYR+L NLA N+L E FLW+P+LEGPT+ + P + M+W+K+W P LGWHDT+A+LT+P+IL+++QS+S +I+QPA DPNA Q SQ +LKFLP ++G+FSL+VPS LG+YWI NN I+T T+V +R
Sbjct: 41 RTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVADAAAATAADTAGAVEGSKEMTGAAXXXXXXNGGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNA------QQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 349
BLAST of mRNA_F-serratus_M_contig1030.349.1 vs. uniprot
Match: A0A4D9D9H4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9H4_9STRA) HSP 1 Score: 293 bits (749), Expect = 1.480e-87 Identity = 159/349 (45.56%), Postives = 218/349 (62.46%), Query Frame = 2
Query: 248 RGLRAVVEPGMLGGV-------DPVWLHQVFTGIADASGPALDPSSATAATSLLAEGGGLFGTGLNLNPVEFLTAMTETAITGLHDMLQGLGVPSAYGISIIFFTVFVKALTYPLTYQQLASTTKMQALGPKVKELQSRYANNPEAANQAISQLYQTENVNPLAGCLPAIAQIPIFISLYRSLLNLAKENKLTEGFLWIPSLEGPTFDSPPTEMMSWIKEWTDGAPKLGWHDTLAYLTIPVILVLTQSVSMKIMQPA---KDPNAPVDDSQQASQNVLKFLPLLIGWFSLSVPSALGLYWILNNFISTTTSVIIRNQIATEM---------GDPSAGAPKIEFPSLPFG 1237
R L+AVV+PG + V WL Q G+ADA+ ++ S + E AIT +H+ L+G G+ + YG+SII FTV VK +T PL Y+Q+ STTKMQA+ PK+KE+Q++Y ++P Q ++QLY NVNPLAGCLPA+ QIPIFISLYR+L NLA N+L E FLW+P+LEGPT+ + P + M+W+K+W P LGWHDT+A+LT+P+IL+++QS+S +I+QPA +DPNA Q SQ +LKFLP ++G+FSL+VPS LG+YWI NN I+T T+V +R I + G PS +P E P FG
Sbjct: 141 RTLKAVVDPGHVAEVVHTHLPSSSAWLLQTLQGVADAAAATAPDAAGAVEGSKEMTSXXXXXXXXXXGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFNPSLGWHDTIAFLTVPLILIVSQSISQQILQPAASKEDPNA------QQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKEEEAVAGGRGGGPSVISPVDESPRRGFG 483
BLAST of mRNA_F-serratus_M_contig1030.349.1 vs. uniprot
Match: A0A7R9UFB5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFB5_9STRA) HSP 1 Score: 279 bits (714), Expect = 5.150e-86 Identity = 145/278 (52.16%), Postives = 194/278 (69.78%), Query Frame = 2
Query: 290 VDPVWLHQVFTGIADASGPALDPSSATAATSLLAEGGGLFGTGLNLNPVEFLTAMTETAITGLHDMLQGLGVPSAYGISIIFFTVFVKALTYPLTYQQLASTTKMQALGPKVKELQSRYANNPEAANQAISQLYQTENVNPLAGCLPAIAQIPIFISLYRSLLNLAKENKLTEGFLWIPSLEGPTFDSPPTEMMSWIKEWTDGAPKLGWHDTLAYLTIPVILVLTQSVSMKIMQPAKDPNAPVDDSQQ---ASQNVLKFLPLLIGWFSLSVPSALGLY 1114
+DP+ L G+A A D +S A + +GGG P+ L A T AITGLHD+L+GLG+ + YG +II FT+ +KA+T+PL +QL ST KMQA+ PK++E+Q+++ANNPE ANQ I+QLYQ ++NPLAGCLP++AQIPIFI+LYRS+LNL+K+N LTE FLW+PSLEGPT+ + + + W+ W DGAP LGWHDTL +LTIPVILVL+Q +S K++Q D+QQ AS +L LP +IGW SL+VPS LG+Y
Sbjct: 65 MDPLVLSHAVQGLAQ---DAADVASEVAKSD---QGGG---------PLGPLIAGTSFAITGLHDLLKGLGLQNPYGYAIILFTLLIKAVTFPLNAKQLESTGKMQAINPKIREIQTKFANNPEKANQMIAQLYQQYDINPLAGCLPSLAQIPIFIALYRSILNLSKDNVLTEPFLWLPSLEGPTYGAEQKDALQWLTTWQDGAPMLGWHDTLCFLTIPVILVLSQKISQKVLQ---------SDAQQPEGASAAILNILPFMIGWVSLNVPSGLGIY 318
BLAST of mRNA_F-serratus_M_contig1030.349.1 vs. uniprot
Match: A0A4D9CYJ8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYJ8_9STRA) HSP 1 Score: 280 bits (717), Expect = 1.600e-85 Identity = 154/316 (48.73%), Postives = 203/316 (64.24%), Query Frame = 2
Query: 245 ARGLRAVVEP-GMLGGVDPVWLHQVFTGIADASGPALDPSSAT--AATSLLAEGGGLFGTGLNLNPVEFLTAMTETAITGLHDMLQGLGVPSAYGISIIFFTVFVKALTYPLTYQQLASTTKMQALGPKVKELQSRYANNPEAANQAISQLYQTENVNPLAGCLPAIAQIPIFISLYRSLLNLAKENKLTEGFLWIPSLEGPTFDSPPTEMMSWI-KEWTDGAPKLGWHDTLAYLTIPVILVLTQSVSMKIMQPAKDPNAPVDDSQQASQNVLKFLPLLIGWFSLSVPSALGLYWILNNFISTTTSVIIRNQIATE 1180
AR LR V++P ++ +DP WL VF G+ADA+ +LD ++A A T A+ G F +N T M AI G+H L LGVP AYG++II FT VK P+TY+Q+ S +MQAL PK KEL+ +Y N NQ ++LY+ VNPLAGCLPA+AQIPIFI+LYRSL+NLA + E FLW+PSL GP + W+ K W DG P LGWHDT+A+LTIPVIL+LTQS+S +++ P D D +Q VLK+LP+++G+FSLSVPS LG+YWI NN IST S+ I+ + A +
Sbjct: 4 ARALRMVLQPHDVVTHLDPAWLSHVFQGVADAAMTSLDATNAAVDATTDAAAKEPGFFDKFVN-------TVMG--AIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQ--ARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSD-----DPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQ 303
BLAST of mRNA_F-serratus_M_contig1030.349.1 vs. uniprot
Match: W7TN75_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN75_9STRA) HSP 1 Score: 281 bits (720), Expect = 1.120e-84 Identity = 155/320 (48.44%), Postives = 205/320 (64.06%), Query Frame = 2
Query: 233 ASAGARGLRAVVEP-GMLGGVDPVWLHQVFTGIADASGPALDPSSAT--AATSLLAEGGGLFGTGLNLNPVEFLTAMTETAITGLHDMLQGLGVPSAYGISIIFFTVFVKALTYPLTYQQLASTTKMQALGPKVKELQSRYANNPEAANQAISQLYQTENVNPLAGCLPAIAQIPIFISLYRSLLNLAKENKLTEGFLWIPSLEGPTFDSPPTEMMSWI-KEWTDGAPKLGWHDTLAYLTIPVILVLTQSVSMKIMQPAKDPNAPVDDSQQASQNVLKFLPLLIGWFSLSVPSALGLYWILNNFISTTTSVIIRNQIATE 1180
A+ G R LR V++P ++ +DP WL VF G+ADA+ +LD ++A A T A+ G F +N T M AI G+H L LGVP AYG++II FT VK P+TY+Q+ S +MQAL PK KEL+ +Y N NQ ++LY+ VNPLAGCLPA+AQIPIFI+LYRSL+NLA + E FLW+PSL GP + W+ K W DG P LGWHDT+A+LTIPVIL+LTQS+S +++ P D D +Q VLK+LP+++G+FSLSVPS LG+YWI NN IST S+ I+ + A +
Sbjct: 102 ATPGTRALRMVLQPHDVVTHLDPAWLSHVFQGVADAAVTSLDATNAAVDATTDAAAKEPGFFDKFVN-------TVMG--AIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQ--ARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSD-----DPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQ 405
BLAST of mRNA_F-serratus_M_contig1030.349.1 vs. uniprot
Match: A0A7S2EC37_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EC37_9STRA) HSP 1 Score: 280 bits (715), Expect = 3.500e-84 Identity = 160/379 (42.22%), Postives = 231/379 (60.95%), Query Frame = 2
Query: 314 VFTGIADASGPALDPSSATAATSLLAEGGGLFGTGLNLNPVEFLTAMTETAITGLHDMLQGLGVPS-AYGISIIFFTVFVKALTYPLTYQQLASTTKMQALGPKVKELQSRYANNPEAANQAISQLYQTENVNPLAGCLPAIAQIPIFISLYRSLLNLAKENKLTEGFLWIPSLEGPTFDSPPTEMMSWI-KEWTDGAPKLGWHDTLAYLTIPVILVLTQSVSMKIMQPAKDPNAPVDDSQQASQNVLKFLPLLIGWFSLSVPSALGLYWILNNFISTTTSVIIRNQIATEMGDPSAGAPKIEFPSLPFGGKESVEGKQDLEGPEILAATVTREGLEDSTSKGFGGPEVLDAELGGDIVSE-DGTPVA--AVGADPKSK 1435
+ +ADAS A +++ A G FG FLT +TG+H L +G+ + A+G+SI+ T+ +K T PLT QL STTKMQ L P +KE+Q++Y +NPE NQ I+++YQT VNPLAGC+P+I QIP+FI LYR++LNLAK + L E FLW+P+LEGPT+ + PT W+ K W DG P LGW +T+A+L IPVILV++Q VSM++MQP + D QQ + +LKFLPL+IG+FSLSVP+ALG+YW+ NNF++T ++ +RN + +P P++ ++ + + P + + + G DS S+G +DAE IVSE D P+A ++ A P+SK
Sbjct: 104 LVNSVADASDIAEAAATSDAVMEAAVNDNGWFG---------FLTMPITGLLTGIHGALVAVGMDANAWGVSIVAMTLIIKLATLPLTKSQLESTTKMQTLQPAIKEVQAKYQSNPEVMNQKIAEIYQTNEVNPLAGCIPSIVQIPVFIGLYRAVLNLAKADALDEPFLWLPNLEGPTYGADPTTGSDWLFKNWVDGTPSLGWDNTVAFLAIPVILVISQFVSMQLMQPKSE-----DPQQQQANAILKFLPLMIGYFSLSVPAALGIYWVTNNFVTTAITLSVRNSLKNAPPPVVTASPSGSGPTV-------IDAESTVFTPAPMRSKPSGFGESDSASEGMKPITTMDAE----IVSEGDDEPIAGSSIPAAPQSK 457
BLAST of mRNA_F-serratus_M_contig1030.349.1 vs. uniprot
Match: A0A7S0XYI9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XYI9_HEMAN) HSP 1 Score: 278 bits (712), Expect = 2.230e-83 Identity = 150/342 (43.86%), Postives = 209/342 (61.11%), Query Frame = 2
Query: 227 PSASAGARGLRAVVEPG-----------------MLGGVDPVWLHQVFTGIADASGPALDPSSATAATSLLAEG-GGLFGTGLNLNPVEFLTAMTETAITGLHDMLQGLGVPSAYGISIIFFTVFVKALTYPLTYQQLASTTKMQALGPKVKELQSRYANNPEAANQAISQLYQTENVNPLAGCLPAIAQIPIFISLYRSLLNLAKENKLTEGFLWIPSLEGPT-----FDSPPTEMMSWIKEWTDGAPKLGWHDTLAYLTIPVILVLTQSVSMKIMQPAKDPNAPVDDSQQASQNVLKFLPLLIGWFSLSVPSALGLYWILNNFISTTTSVIIRNQIATEM 1183
P+ + GA GLRA+ E +L VD +H ADA+ ++ T E GG+FG L T + LH + + +P A+G +I+ FT+FVKA+TYPL Y+Q+AST MQ L PK+K +Q+RY ++P+ N+ +QLY+ E VNPLAGC+PA+ Q+PIFI+LYR LL LA ++KL E FLWIPSLEGP + P + + W+ +W DGAP LGW DTLAYL++PVILV+TQ++S K++QP + D +QQ +Q +LKFLPL+IGWF+L+VP+ LG+YW++NN +ST IR Q EM
Sbjct: 72 PTRTLGATGLRAIAEHADAANHFAFLLSTHMDADVLSKVDMSEVHNAVMHFADAAAATAKEAANTVTEEAKKEDDGGIFG---------LLVKGVSTCLVTLHSIFKAANLPGAWGWAIMTFTIFVKAITYPLNYKQMASTISMQKLQPKLKAIQARYKDDPQKQNEMTAQLYKDEEVNPLAGCIPALVQLPIFIALYRGLLELAMQDKLQESFLWIPSLEGPVGKYNPVTNLPEDGLGWLTKWVDGAPPLGWEDTLAYLSLPVILVVTQTISQKLLQPPQSD----DPAQQQTQAILKFLPLMIGWFALNVPAGLGVYWVINNGLSTLQQWYIRQQFKDEM 400
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 548.9 |
Seed ortholog evalue | 2.3e-153 |
Seed eggNOG ortholog | 2880.D8LUC7 |
Preferred name | ALB3.1 |
KEGG ko | ko:K03217 |
KEGG TC | 2.A.9 |
KEGG Pathway | ko02024,ko03060,ko03070,map02024,map03060,map03070 |
KEGG Module | M00335 |
Hectar predicted targeting category | chloroplast |
GOs | GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0006996,GO:0008104,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009658,GO:0009668,GO:0009987,GO:0010027,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0017038,GO:0019904,GO:0022607,GO:0031976,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034357,GO:0034613,GO:0042651,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045036,GO:0045038,GO:0045184,GO:0046907,GO:0050789,GO:0050793,GO:0050794,GO:0051179,GO:0051234,GO:0051259,GO:0051291,GO:0051641,GO:0051649,GO:0055035,GO:0055085,GO:0061024,GO:0065002,GO:0065003,GO:0065007,GO:0070206,GO:0070208,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072596,GO:0072598,GO:0072657,GO:0090150,GO:0090342 |
EggNOG free text desc. | membrane insertase activity |
EggNOG OGs | COG0706@1,KOG1239@2759 |
Ec32 ortholog description | Alb3 homolog, thylakoidal inner membrane insertase |
Ec32 ortholog | Ec-14_004480.1 |
COG Functional cat. | U |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko02044,ko03029 |
Exons | 12 |
Model size | 1769 |
Cds size | 1410 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928839.4921675-UTR-F-serratus_M_contig1030:8318..8598 | 1622928839.4921675-UTR-F-serratus_M_contig1030:8318..8598 | Fucus serratus male | UTR | F-serratus_M_contig1030 8319..8598 - |
1690962595.564674-UTR-F-serratus_M_contig1030:8318..8598 | 1690962595.564674-UTR-F-serratus_M_contig1030:8318..8598 | Fucus serratus male | UTR | F-serratus_M_contig1030 8319..8598 - |
1622928839.7319381-UTR-F-serratus_M_contig1030:21065..21144 | 1622928839.7319381-UTR-F-serratus_M_contig1030:21065..21144 | Fucus serratus male | UTR | F-serratus_M_contig1030 21066..21144 - |
1690962595.7182567-UTR-F-serratus_M_contig1030:21065..21144 | 1690962595.7182567-UTR-F-serratus_M_contig1030:21065..21144 | Fucus serratus male | UTR | F-serratus_M_contig1030 21066..21144 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928839.5151856-CDS-F-serratus_M_contig1030:8598..8646 | 1622928839.5151856-CDS-F-serratus_M_contig1030:8598..8646 | Fucus serratus male | CDS | F-serratus_M_contig1030 8599..8646 - |
1690962595.579702-CDS-F-serratus_M_contig1030:8598..8646 | 1690962595.579702-CDS-F-serratus_M_contig1030:8598..8646 | Fucus serratus male | CDS | F-serratus_M_contig1030 8599..8646 - |
1622928839.535742-CDS-F-serratus_M_contig1030:9701..9819 | 1622928839.535742-CDS-F-serratus_M_contig1030:9701..9819 | Fucus serratus male | CDS | F-serratus_M_contig1030 9702..9819 - |
1690962595.5890527-CDS-F-serratus_M_contig1030:9701..9819 | 1690962595.5890527-CDS-F-serratus_M_contig1030:9701..9819 | Fucus serratus male | CDS | F-serratus_M_contig1030 9702..9819 - |
1622928839.5489109-CDS-F-serratus_M_contig1030:10351..10506 | 1622928839.5489109-CDS-F-serratus_M_contig1030:10351..10506 | Fucus serratus male | CDS | F-serratus_M_contig1030 10352..10506 - |
1690962595.6026719-CDS-F-serratus_M_contig1030:10351..10506 | 1690962595.6026719-CDS-F-serratus_M_contig1030:10351..10506 | Fucus serratus male | CDS | F-serratus_M_contig1030 10352..10506 - |
1622928839.5641856-CDS-F-serratus_M_contig1030:11581..11704 | 1622928839.5641856-CDS-F-serratus_M_contig1030:11581..11704 | Fucus serratus male | CDS | F-serratus_M_contig1030 11582..11704 - |
1690962595.6118858-CDS-F-serratus_M_contig1030:11581..11704 | 1690962595.6118858-CDS-F-serratus_M_contig1030:11581..11704 | Fucus serratus male | CDS | F-serratus_M_contig1030 11582..11704 - |
1622928839.5804088-CDS-F-serratus_M_contig1030:12135..12287 | 1622928839.5804088-CDS-F-serratus_M_contig1030:12135..12287 | Fucus serratus male | CDS | F-serratus_M_contig1030 12136..12287 - |
1690962595.6210408-CDS-F-serratus_M_contig1030:12135..12287 | 1690962595.6210408-CDS-F-serratus_M_contig1030:12135..12287 | Fucus serratus male | CDS | F-serratus_M_contig1030 12136..12287 - |
1622928839.6135178-CDS-F-serratus_M_contig1030:12552..12677 | 1622928839.6135178-CDS-F-serratus_M_contig1030:12552..12677 | Fucus serratus male | CDS | F-serratus_M_contig1030 12553..12677 - |
1690962595.6304076-CDS-F-serratus_M_contig1030:12552..12677 | 1690962595.6304076-CDS-F-serratus_M_contig1030:12552..12677 | Fucus serratus male | CDS | F-serratus_M_contig1030 12553..12677 - |
1622928839.6274755-CDS-F-serratus_M_contig1030:16341..16487 | 1622928839.6274755-CDS-F-serratus_M_contig1030:16341..16487 | Fucus serratus male | CDS | F-serratus_M_contig1030 16342..16487 - |
1690962595.6428425-CDS-F-serratus_M_contig1030:16341..16487 | 1690962595.6428425-CDS-F-serratus_M_contig1030:16341..16487 | Fucus serratus male | CDS | F-serratus_M_contig1030 16342..16487 - |
1622928839.650398-CDS-F-serratus_M_contig1030:17145..17444 | 1622928839.650398-CDS-F-serratus_M_contig1030:17145..17444 | Fucus serratus male | CDS | F-serratus_M_contig1030 17146..17444 - |
1690962595.6680331-CDS-F-serratus_M_contig1030:17145..17444 | 1690962595.6680331-CDS-F-serratus_M_contig1030:17145..17444 | Fucus serratus male | CDS | F-serratus_M_contig1030 17146..17444 - |
1622928839.6709971-CDS-F-serratus_M_contig1030:18328..18418 | 1622928839.6709971-CDS-F-serratus_M_contig1030:18328..18418 | Fucus serratus male | CDS | F-serratus_M_contig1030 18329..18418 - |
1690962595.678838-CDS-F-serratus_M_contig1030:18328..18418 | 1690962595.678838-CDS-F-serratus_M_contig1030:18328..18418 | Fucus serratus male | CDS | F-serratus_M_contig1030 18329..18418 - |
1622928839.6857574-CDS-F-serratus_M_contig1030:20150..20216 | 1622928839.6857574-CDS-F-serratus_M_contig1030:20150..20216 | Fucus serratus male | CDS | F-serratus_M_contig1030 20151..20216 - |
1690962595.6878412-CDS-F-serratus_M_contig1030:20150..20216 | 1690962595.6878412-CDS-F-serratus_M_contig1030:20150..20216 | Fucus serratus male | CDS | F-serratus_M_contig1030 20151..20216 - |
1622928839.7016194-CDS-F-serratus_M_contig1030:20605..20651 | 1622928839.7016194-CDS-F-serratus_M_contig1030:20605..20651 | Fucus serratus male | CDS | F-serratus_M_contig1030 20606..20651 - |
1690962595.6966496-CDS-F-serratus_M_contig1030:20605..20651 | 1690962595.6966496-CDS-F-serratus_M_contig1030:20605..20651 | Fucus serratus male | CDS | F-serratus_M_contig1030 20606..20651 - |
1622928839.7175496-CDS-F-serratus_M_contig1030:21023..21065 | 1622928839.7175496-CDS-F-serratus_M_contig1030:21023..21065 | Fucus serratus male | CDS | F-serratus_M_contig1030 21024..21065 - |
1690962595.7099621-CDS-F-serratus_M_contig1030:21023..21065 | 1690962595.7099621-CDS-F-serratus_M_contig1030:21023..21065 | Fucus serratus male | CDS | F-serratus_M_contig1030 21024..21065 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1030.349.1 >prot_F-serratus_M_contig1030.349.1 ID=prot_F-serratus_M_contig1030.349.1|Name=mRNA_F-serratus_M_contig1030.349.1|organism=Fucus serratus male|type=polypeptide|length=470bp
MCGLLSSMVVAYAMASTATTVSAFTPTVSARSRFVPSARHWTSKATSARP SASAGARGLRAVVEPGMLGGVDPVWLHQVFTGIADASGPALDPSSATAAT SLLAEGGGLFGTGLNLNPVEFLTAMTETAITGLHDMLQGLGVPSAYGISI IFFTVFVKALTYPLTYQQLASTTKMQALGPKVKELQSRYANNPEAANQAI SQLYQTENVNPLAGCLPAIAQIPIFISLYRSLLNLAKENKLTEGFLWIPS LEGPTFDSPPTEMMSWIKEWTDGAPKLGWHDTLAYLTIPVILVLTQSVSM KIMQPAKDPNAPVDDSQQASQNVLKFLPLLIGWFSLSVPSALGLYWILNN FISTTTSVIIRNQIATEMGDPSAGAPKIEFPSLPFGGKESVEGKQDLEGP EILAATVTREGLEDSTSKGFGGPEVLDAELGGDIVSEDGTPVAAVGADPK SKPKGATKKRTKKKKARKS* back to topmRNA from alignment at F-serratus_M_contig1030:8319..21144- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1030.349.1 ID=mRNA_F-serratus_M_contig1030.349.1|Name=mRNA_F-serratus_M_contig1030.349.1|organism=Fucus serratus male|type=mRNA|length=12826bp|location=Sequence derived from alignment at F-serratus_M_contig1030:8319..21144- (Fucus serratus male) GCGGTGGAGATTGAACCACCACACCCAACCCTTCGAACCCCTCCCGCTGC
TACGCGGTGAAGAGGTATTTCTAAGAACGATGTGCGGGTTATTGTCATCG
ATGGTCGTAGCGTATGCTATGGTGAGTCTTGATCTTCGTGCCATGCAACA
CATCGTGCATTTTGTCAGCAAAGGTCCAAACAAACAAACGCACCCGTCGC
TGACGAGCAAAGGTTCACGTTCATGCGTACAGCAGAGCACACAGCGATCA
GCTCCGAGCGGTTGCCCCTCGCAAGCTACATAGAAGACGTTTCTAGTGTG
CATTCTTTTGCTGTATCTATGTTACCCCGCTCAGCTTTTGGTTATTCGCC
GAGCCAGACTAGTCTCTGACTCTCGTGTTTTCACCCCGAGCCCGTACTGA
ATTTACTTGTATATACCTGTACTTAAAACCATCATATTTGTCTCCTCGAC
GGCTCGGTGGGGATATTTCTGGCTATCGCGTCGGTTCTGCCAGGCCAGCA
CGGCCACGACCGTGTCAGCATTCACCCCGACAGTCTCAGGTGGGCTACCT
AACCGACACATGTGGTTTAAACGCTATGAAGTTTGCCAACTCTAGCAGCT
CACTCTTACACACAGACACGAATTAACACTGGCGCGGGCAACACGTAAAA
CTTGTCTTATCCCAAAGAGATCGTGACAGCGGTGCGAGATAATCTACAGA
ATACGAGCGACGCGCGCCCGATCAAGAGACGCATGCTTGTCTTCGAGTGC
AGTTGGTTTGAGAGCTGGGAGCTTCGGCAAAGCAGAGCGAGCATAGTTTA
CTCTGTTTGCCAAATATTTCATGTTTTTTCATGCAGAGCCCTCGGTAAAT
CGAGCGCTCGTCGACACTCGATGATGTGAGAATATGACACACGACACCCC
CGTTATGTTTCTGCTCCCAATGACGCAGCCCGTTCGCGATTCGTTCCATC
AGCTCGCCATTGGACTTCAAAGGCCACCTCAGCGCGTCCCTCCGGTGAGA
TCGAGTATAGAGCTAACGTCTCCTTTTGAATGACGGTGTTAGGTTGGCTG
CTGCCACTTGTGTGTGGGTGTGGGTGTGGGTGGGTGTGTGTGTTGTCATC
CCATTTATTCTGGACGTCAGGCTTGTGGACGCACCAGCCGGGGTTACACC
GGAGGAAGGTCAGAGCTACAGTATGATATTACTAATCTCGTAGAGCATAA
TATCAATAGTTTGTCATCGGTATAGCACTGGGGTGTGGGGTTGGAGGATG
CTATCAATCCTTGGCTGTACAGGCTACAGTAGCGCGGGCAGCGATTGACG
TTGGAGTGGCTGTAAAGTCGTCGCGCTTCCCGCTTCCCGAGGGAATGGAG
GGACTGTTGGTGCTCTTTTCGTGTGCCGTGGCACGTTCTGCTCATTCTGC
AATTCTACCATGGAGTTCTAAGCCAGACGAGCCGGCAGTAGTGTGTATGG
TCATCACTTGGTTTTGTGTACGACTGCGTTCACGCCTGATCTCGTATATA
GATAATACAGTTTTGATCCTCTCTGACGTGAATAAAACGGAATACAAAGG
ACTGTACTGCTGCTGCCCTAAATAAGACCTCGCTGCATTTGTCTTTATGG
GGTTGGGGGGGGAAGATAGTCTTGTATAGGCTGAAAGAGGAGTGTCGCTG
AAAAATGAAATCGCTATTTTTCAGCACCCATTTTTCAGGACGCCTTTGTA
TGGGCTAAAAAATTGCCAGCCCATATTTTACCGGCCGGTCGAGGTCGTTC
GCCCGCTGAAAGTTGACCCTCCACTTTGCAGCGACTCCTTATCTGGAGTC
GGGCGCTGAAAGATTGAATTGTATAACTGGCGGGGCAGCATCGATAGAGA
AAGAGGAAAATACAGGTTTCCAAGTTTTCTCCGACCCCAGGGTGGCAGGT
GGTGGTTTTGCTTGTATAAATAGGCGATGCTTCAGCAGAGTGAGTGCCAC
AGCGTCACCCTGCCATGGCTGACGACTATGATGATGAGGAGCTAGTGATA
TAAAACTAATAATACTATAGCCGTATACTTGCACGTGTTAGACGTACAAT
AATTTCATGCTGCCTCTTTTTACTCCAGCATCAGACAATGCCCGAGCGAG
GAGTATGACAGAGAGAAATATAAATCCATCATTTGTGTATCCCTGTTGAT
AGATAGCTGCTTTTAATCGCCACGAAAGCCCCCACAACGAGGCCGCAACC
GGCCCACGCGCGATATTATTCTGTGATCGCCCCAACTCTAGGCAAAGCGT
GTTGTGCCGAACGCTCCGTGCTGAAGCTGCTGCTACGCGACCCGGCATCC
CTAACTGACTGTCTGTAGAAACCTTGGAAATAGAGCAGCTTTTTTGTTCC
TCGATACAGGCCAAGAGTATTTCAATCACGAGCATCAGTTTGGTTGCCCA
CCCTTCCGTTCGGTAGACATCAAAGATCAGACGTGGCCTAGCTAAAACAA
ATAAAGCGCCGCTCAACAGCAGCACAGCCGAGGGTACACCCTAAAACATC
AAGATGATTGATAATACCAGAGGGGTCAGGTGCTCTAATTTTCGGATGCT
GCCAGGTTATCCCCTTCGTGCGCGCAAGTATAAACGGCTCGCGCCTGGTT
GGCGATTCCTCCGTTTTTCACGCCCCGTACAAGGTGGTCTAAAGCCAGGG
TAGAGATCCGATCGACATTGCATGCCGTTGCTCTCCTTCCTTTCGCTGTG
CCCAACTAACTCCGCGCAACATGCAGCATCCGCGGGGGCACGGGGACTGA
GGGCAGTAGTGGAACCGGGGATGCTAGGCGGGGTGGACCCTGTGTGGTTG
CACCAGGTTTTCACAGGTGAGGGGGCAGGACGAACCGTGTATGATCGTCG
CAGCTGTGGTAAAACATCCCGGTGCCTGGTATGGTAGATGCCTCAAGCAC
CGGGTTTTCCCCCTTTGATCGAGGTCGCAGGTCGTGTCGGCAGCACCGCG
TTGTAGTCGACGAGCGGCGAACAGTGTGAGATAGGTCAGGTCAATCTTAC
ATGTTTGCACAAGTCGGTAGCGACTTAATGTGTCAGACCGTCAGTTTCCA
TGTAACGACGCCGCTGCACCAACAAGGACAAACGTCGTTGGCTGGCAGTG
TATGGCGAGCCCGAAGAACTTTTGCGGCCGCGCCACAACTCCCCCCGATC
AAACGCCTCGCAGCTATGGAACTCATTTTCTTACTCCCGGACAGGGGACG
ACGAGCAGATTTATCGCGAATCGCGGAACCTGCAAATAAACCGGGTTTCC
GTCGCTCACACGACACTTTTCACTCTCTCAACCCCCCGTGCAATCAAACC
ATACAGTATGAGGCTTTTATCTCGAAGAAAGGTGGAGATGGTTGGTTGGA
TCGCGCAAGGTCGTTCATGACTGTTCGACCGGTAGAGCATCACTGCCTTA
TGAACCTTCTGCCACTACCTCACCGCCCCCTCCGCCTCTTATCACTATTA
GAACGTACTTGTAAAAACGCACACCTCACCCACGTACACATATTTATACG
TAACAACAATGCGGTAAGTTCTGATTGGTCATACAGAGACCAAACGCCCA
AAATCATGTGGTGCCAAAACAACCCAGAAAGGAAAACCTTTGCTTACTTC
CCAGTACGAAATATGTAATGATGCTTGATGGTCGGCGCATGCTAGAGAGA
AAAGTGGAGTCCGGTGGGGTCTGAGAACTGGTTTTGAAATCGATCGTCAG
GGATCGCCGACGCTTCCGGGCCGGCGTTGGACCCCTCGAGCGCCACGGCA
GCGACCTCTCTGCTGGCGGAGGGAGGCGGCTTGTTCGGCACGGGCCTGAA
CCTTAACCCCGTCGAGTTCCTCACGGCGATGACCGAGACGGCGATCACCG
GGCTGCACGATATGCTCCAGGGCTTGGGCGTGCCCTCGGCGTACGGTATC
TCCATCATATTTTTCACGGTGTTTGTGAAGGCGTTAACGTACCCCTTGAC
GTACCAGCAGCTTGCTAGCACCACCAAGATGCAGGCGCTGGGACCCAAGG
TGCGGCGTGCGCGAATGTTTATTTTATACAGGGTACGATTTGCCCCGTTT
CCGGGTTTCGTTTTATGGAAGGGTGTTTCTTGCAGAGGAGCGGGAAAAGG
AGATTTTGCGACTGAGAAAATCGTTTAAGAAATATTAGAGGTAAGATGAC
GGCTTATGCTTCAAAAAGTGGGAAAAATTCAGGCGCTCTCTGCGGCAACT
GTTTACCACGAAAGACGAGACAGGGAACAGGCCATTTCTCTCAGCCAAAA
CACTCGCCGCACCATCCTCGTCTTGATCTCCGCACATAAGAAATCTAGCA
GTAGTCGTTGATAGGGGGGTGGGAGGAACGCCTCCTCGCCATTATTTGGT
CAATTGTGGTCATTATCTATAGCTAGCGTTCTCGCGTGTCTGGCGTTATT
GTTCCAGGTTTTTTGCGCGTCTGATTGCTCGGTCAGATTCAAGCTCTACT
ATGCAAAAGCCAGTTTCATTTCGGTGGCATGCACGCATGGCTACGAAAAA
ACACACCCTCGAAAAGCTGGGGAGGCCAAGGTTTTCGATTGCGCGAGTTT
CGACTCGAAACTTGGACCCGCCGGTGCCATCCCCCCCCCCCCGAAAATAC
GCAGCGGGTGTCGCTATCTAATAATAAATAAATGAATAAACATGCACGCC
ATTTCAGGTGAAGGAGCTCCAGAGCCGGTACGCCAACAATCCGGAGGCAG
CTAACCAGGCGATCTCGCAGCTCTATCAGACGGAGAACGTGAACCCCCTG
GCGGGTTGTCTGCCGGCCATTGCTCAGATCCCGATCTTCATCTCGCTGTA
CAGGTTAGGTGCAAAGTAATTCGGAGGGCGTTTGATTTCGATTGGCTGGC
GTGTTCCATGTCGCATTGTAGCGAGGCGTTTCTTGTCCTGCGACGGGCAC
TCGTTATCTTATCTTTTGATCCAGTCCTATCTCGACTACATACGTTAGGC
GTGGACCAGCGAGGTGTGTGGAAATCGATGGGCTATATTTTCAGCAGAAT
TTGTAATAATACCATCGATGCTAATAATAGTATTAATGATTTTAATAGTA
TTATTAGTACCGATATTATTAATGATATGAATACTATCAATACAGCTGGT
GCTAATAACGCTATTAATAGTATTAATGTTTTTAATACTACTAGCACTAA
TAATACTATTAATATTAATAATTTTAATACTATCGATACTAATAATACTT
TAAATGATATTAATACTATTAGTACTAATATTATCATCAATGATATTAGT
ACTAGTAATTATATTAATGATATTGAAACTATTAGTACTAATAATACTGT
TAGTGATATCAATAATATTAGTACTACTAATGGTATTTATACTATTTATA
ACATCAATACTAAGAATATTATTAGTACTAATAATGATGTTAATACTTAT
AGTACTAATACTACTACCAAGTATTAATTATACTAATACTAAAAATTCTA
CGGATATGTACTCGTTCTGATTTTCCATGGCGGAAAGGGTACGATAAAAA
ATAAAAAGCGTACCGAGGATAACTGTTACATTCCAAACATCAATAGTATA
TTTTATCGTAGATGACTGTAACGTTGCTGAAGTGGCTCCAGGCGGTTAAT
ATGGGCAGTGTTGCTGTACTATTAATAGGAGTATAGTATTAATAGTAATA
GTAATAATAAAATAGTAACACGTTGGCGGAAAGTGAAAAAAAAAGAGACA
AGAGTAAAAGGAATACGACACGATTAACGGAGCCCCACACACTTGGGCCG
AAAAATATATTTTGGGCACAAAATACTGATGAAACCGTAACACGACTGTA
GCTACTAGCCAATGGGTGGGAGGCCAAATGGAGCTTGATTAAAGAAAACA
GAGAGAAAACTGAAGAGCCCTCTTGGGGAACCTCGGATAACGGAGCAACC
ACGGCGCCATGGCAGCTCTGCAAGATACGTGATCCTATGACTCAGGGCTA
TCGGCCTGGAGGGGCTTGCAGGTCATGTAGCACGATACCAAGGAAATCGT
CTCGGAGCCCATGACCGTTCCTCGTTGTTTCTCACTATACTATTTGGACG
CTCGGTCATAACCTTTCAAACACCTCCTGTGACCCATGGCCCCCGGGCCA
GCTGGGTACTGGTAGACTGCACTATCGCCGCGACTGCATTTGCGTAGCAC
ATGGTAAACACTGCAGATAAAGGTCCGAGACTAGTTGATATCTCTCTTGT
GGCAATACAGTATATTTTCGAGAGTTGTGCTCGGTCGGCCCGAGCATGAT
CTCCCGCCATGCAGCAGTAGGAACAGCAGCAGGTATGGACCGCTCTTGAG
CCTGATATCGCCTCCGAGACCGCGGTTTTGCTCCGCAGACCTCCCAAACC
CCTGCTGGAGCACCCTCCGAAGAGGACAACCTTCTACATGCTACTAAATC
GAAGAAAGTTTTCTGAATGTATGTAGTCACTTTTCTGTGGCTTTTGCGGT
GGGATTCCCGGGTTTGCACAAAACGCCTGGAGAGCCAAAAAATCGGTGGC
CGAACCTCGGTACATGACCTTCGAAGCCCAAAACTTCCTTCTGGACAAAA
TGCATGACTATGCACTCTTACGTTTGGAAGGTGTAGCGATGTGTACAGCA
GCGGTCTCACATCTCAAATTGTTGATGCCAAAATTGTATTTTGAGGCATA
AACGCCCGTATTCACGCCTTTCTTGTACCGATCAACCTGTTTTTTCAATG
TTGTAGAGGTGTCGGCATGTCACTGGACCGTTCCTGGCCAATCAGGGGCG
GAGCTGCCGTTATTCATATGCCCTGATACCCATTTTACGAACCGTAACAA
ATATATATATGTATCTATCTAAATGAGGTTTTCTATTCCTATAGGAAAAA
GGGGCCCCGTTGAAGGAAACTCCACAGCCGGTCGCCCCGGTGGTTCAGTT
GGTAACCTCGAAATCTTTTGACGTTGGGACGTGAGTTCGAATCTCGGTGT
CGTCACACGAACTAGAATTTTTCCTCACAAAAAAAAAAGAAAATGCCCAA
TAAATGGAGAACGATTAAATCGTTAGTACACAAATTTCGACTTCACGGTC
GACGAGAGAAAGGAACGGCTGAATCCTTCTCGCGAGAAAAGTTAAGGCAA
GCACTGCAGAAGTAAGGTGGAGAAACCCTGTGTGGTCCTCCTGTGTGACC
CCGGTGGGTACGTCCACAAACCTGATGCCCAGAATAAATGGGATGACAAC
ACACACGCACACACGCAATACTATTAACGGGGCCCCACACACTTGGGCCG
AAATTTTCTTTTGGGCACAAAATACTAGTGAAACCACCACATGACTGTAG
CTACTAGCCAATGGGTGGGAGGCCAAATGGAGCTTATGAAAAGAAAACAG
AGAGAAAACTGAAGAGCCCTCTTGGGGCACCTCGGATAACGGAGCAACCA
CGGCGCCATGGCAGCTCTGCAAGGTACATACGTGATCCTATGACTCAGGG
CTATCGGCCTGGGGGGGCTTGTAGGTTATGTGGCACGATGCCAAGGAAAC
CGTCTCGGAGCCCAGGACCATTCCTCGTTGTTTCTCACTATACTATTTGC
ACCACGGTCATAACCCTTCAAATACCTCCTGTGACCTATGGCCCCCGGGC
GAGCTCGGTGCAGGTAGGCTGCCCTATCGCCGCGTGTGCATTTGCGTAGC
ACATGATAAACACTGCAGATAAAGGTCCGAGACTAGTTGATATCTCTCTT
GTGGCAATACAGTACATTTTCGAGAGTTGTGCTTGGTCGGCCCGAGCCAG
GTCTCCCGCCATTCAGCAGTAGGAACATCAACAGGTATGGACCGCTCTTG
AGTCTGATATCGCCTCCGGGACCGCGGTTTTGCTCAGCAGACCTCCCCCA
CCCCTGCTGGAGCACCCTCCGAAGAAGACAGCCTTCTACCTGCTACCCAG
CCGAAGAAAGTTGTCTAAATGTGTGGAGGGGGGGATTCCCGAGTTACATA
AAACCACCAAAAAGTCGGCCGCCGAACCTCGGTACATGACCTTACGAAGT
CCAAAACTTCCTACTGAACAAAGATGCATGACTATGCACTCTTACGTTTG
GAGGATGTGGCGATAGGGACATCAGCGGTCTCACACCTCATATTGATAAT
ACCAAAATGATACTTCGAGGCAAAAATGCCCGTATTCACGCCTTTCTTGT
ACCGATCAACCAATCAACGATCAACCTTTTTTTTAATGTTGTAGAGGTGT
CGGAATGTTTCTGGACCGTTCCTGGCCAATCAGGGGCGGAGCTGCCGATA
TTTATATGCCCTTAATGACCATTTGACGAATCGTAACATAAAAATTTCAT
ATAAATGAGGTAGAGGTGTTCTATTCCTATAAGGTAAAAGGGGCCCCGTT
AAGTCCACCGCAATGCTCCTGGACGACGACCGGGTTTGGGAAATTGTAAT
GAGCATCCGAGTCGTCGCTTGCCGGGCGTGACTGGTGCCCCCTCCCCGTC
CTCCGTCGTTCCTCAAGATCTCTGCTGAACCTGGCCAAGGAAAACAAGCT
GACGGAAGGCTTCCTGTGGATTCCAAGCCTAGAGGGGCCCACGTTCGACT
CCCCACCCACAGAGATGATGAGCTGGATCAAGGAATGGACCGGTGAGGCT
TTTGATGAGACAATGCCTTTTTTTTTCAGCGAGGGGGTATGGGGGGTATA
ATGAAATTTCCCCGTTTGGAAGACGCTCTTTCTCGAAGGTGCCTCGCGCT
CGATACCCTTTTTACATTTATGTTTTCTATGATGTCCCCCGCTTTGTCAA
CGTGTGTGATGCCGCTGTTGATCGGGTAACGTGGCGTGGGACGGGGGCGT
GGGGGGCGGCGGCGTCGTGGGAAAACCTCCTTAAAAAAAAAAAAAAAACG
GTCTTAGATGGGGCGCCGAAGCTCGGCTGGCACGACACGCTGGCGTACTT
GACGATTCCCGTGATCCTGGTGCTAACGCAGTCGGTTTCGATGAAGATTA
TGCAGCCGGCGAAGGACCCCAACGCCCCTGTGGACGACTCTCAGCAAGCC
TCTCAGAATGCGAGTACCTGCACACGCATACGCGCGATGCGATGCGATGC
GATTCACGGTCGTTTGCGACTGTGCCGTAATACAATCCAGTACTTGCCCG
TGACTTTGCCGTAATACAATGCAGTACAATGTACGTGTCTTTGCGTGTGT
TGTGTGTCGGAGGTTTGTACTTGTGTGTGTTTTTCACCAGCCCGGACCGC
CAGCTCAGCGCGTGTCGCCGGAGTACGGTGCTATCTATTTGTAGTAGTGG
CCAGCTGTTGCTCTCACCACCGACGATCGCTCGATGGATCGATTCATCTC
CACGGTCGATCAGCCGGCCAGGACGCTTGTTAGACGTGCGCAACCCCCCC
GCCCCCCTGAACCCTCGGACCCCGCCCTCGTGAAATGTCTGCTGTGCTGT
CGTTCTCCGCCGCCCCGACGCCGGCTTTAACGCGAAGCAGGTGCTCAAGT
TCCTGCCGCTGTTGATTGGCTGGTTTTCACTCAGCGTGCCCTCGGCTCTG
GGTCTGTACTGGATCCTCAACAACTTCATTTCTACGACAACATCTGTCAT
CATCAGGAACCAGGTAGGTGTGTGTGTGTGTGTGTGTGTATTTATTAAAT
TGCACATAACCACGCAATCCGGCCCTGTCATCCTAGTCATTCTATGCCAC
TCGCATTGATCCTCCCGAGGGGGGATCAATGATACTTATTACGAAAACCT
CTGATCAGACGCGACAAAGGGGACACGCTCTCTCTACTTGTACAATTCTT
ACTTAAGCCCAGAGTTCCTTGTGCTCCCCCCCCTGCTTCCTTGTTTCTCT
CTACATTATCTGAGTTGGCAGCTACTGGATCTATCCTTTCTTTCTACATC
TCTTCCTCTTTCCGCCAAAGTCTCCCCCGTTTTCCCCTTGGCGTCTACAA
CTTTTTAGCGGTTTCTTGCGCTTCTTATACTCTCTAACGCCATCCCCGAT
CTGTGTGTGTGTGTGTATGAGGGTTTATTTATTAAATTGCACATAACCGC
GCAATCCGACCCTGTCATCGTAGGCATTCTATGCAACTCGCATGTGTGTG
TATGTGTGCCGTGTGTTGGGTGGGAGGAGGGGTAACTCGTTTGTGTCTTG
GAATTCGTACTCTCCGCAACATAAAACGGAAGGTATGCTCTGAAGGGGAT
CGGCACAGTACAAGGTTGTGCCGGCGCTACCCTTGCGTCCCTCCCTCCCC
TTTCGTCGATACTGATAGTATTGATCGTATTGATATTAGTATTGATAGTA
TTGATAGTATTGGTTGCATTGATAGTATTGATCGTGTCACGGCTAACGGT
TAGCTATTACTGGTAATAAGAGTATGCCAATACTAGTAATAGTCCATTAG
ACTAGGCAGCGCTGACTACTACTTGTGTAATCTATTGGGATAATGTTGAC
TAAATAATCCAATGGGTTCATTTCTGACTATAATACTGTAGTGGTTTTGA
TCGAGGAATATGGCGTTTTCCACGTGGGTGCGCACCAGAGAGGGCACACT
CTGCGTTCTCCCGCGATCGTATGCTGTCGATCTATGGGTGTGAAGTGTCA
TTTTGAGCAAGCTTTAAAACAATGCATTTTTCCTGTGTATACCCGTGCAT
GTTTGTGATTCGGGCGGGGGGTGGGGGTGGGGGTGCAGATTGCGACCGAA
ATGGGCGATCCCTCCGCTGGCGCCCCCAAGATAGAGTTTCCGTCGCTGCC
GTTCGGGGGGAAGGAGAGCGTTGAGGGAAAACAAGATCTGGAGGGGCCGG
AAATCCTGGCGGCTACGGTCACGCGAGAAGGGCTTGAAGACAGGCAAAAA
CATTTCCTGGGCATTTGTTGGTCAAGAAATGTTCACGGGAGGCTTTCGTT
TGTTAATGGCAATCTTCACATCACTTCGCACGTATCTAGTGTGGTTAGTT
TCCTCTGGGAGAGAGGGTGGTTCCCCTCTGGTCGTATATACGCGTTTAAA
TGACACTATCCTCATTCCGTCAATTCTGCCTGTGCCCCCCACCCCCTTGC
CGTCCTCGCCTTCGTGGTGACCCAGAGCATCGTGGCCTCGCTCTTGCGCG
CAAAGCTTTCGACATAGCTCAATTTAATTTGCTTTCGCGCGATGCCTTCT
ACTACAGTACTGTATTGACCCCAGCAGTAAAGCACTGACGCATTGATGTT
GGTACGGCACTTTTCCAACGTCACGCACCCCTTACATTGATAATTCGTAA
GAGGCAAAATATACAGCTCTATTATGTGCAGGAACTTTCGGTTTTATTTT
AGGTACCTCGCTGCTTGCTTTTTTCTAAACTTGCGCCCTTCCTGCACCCC
GACTTGCGCACGTTGGCGCGTGCAGCACTTCCAAGGGGTTCGGGGGACCG
GAGGTGCTCGACGCTGAGTTAGGCGGGGACATCGTATCGGAAGACGGGAC
GCCGGTCGCCGCGGTAGGCGCGGACCCCAAGTCCAAGCCCAAGGTGCGTT
GTTGCACCGAGCGGGCACCACGATGCGGCGATCTCGTTCGCGACAAGTGA
TAGCTACGTGTTTTTTCTCTGGCGAGTTCACATAGGCACTCGGGTGAACC
AGGATTAAGACTGGCGCATAGCTCGTCCCCCCGCCGTAGGTAATATATTT
AATATAATACAGTACCAGTATATCATTGCCAATAATGTGCATAAAGAAAA
GTAGACGTTGAAATTGTAGCGAGCGCCCCGAGGGCATGACAGTCAAGGGG
TGACGTTGCGATGTGCGTTCGCGTGCTTGATCCGCGTCGTCCACTCTTCG
CCCCCCCCTAATCCGTGTTCCCCTCCCTGACCCCCCCCCACATACATACG
CACAAATACTTCCACCGCCCATCGCTCCGCGTGAGCTTGTGGAGCTTCGC
CGAGGTTGAGATCGTGTGCGATTCGCTAACAATTCCTTAAGATCTACATT
CTTGTGTATATGCCGCACATGTCCTCCGTTCCAATAATAGTATATAATAG
TATAGTGGGTGTGGGAAAAGAGAGGCGCACAAATATTGGTCATAGTCCAT
AGCAATACCTGAAAAGGCAGCATCCGTTACTCGAGTTACCTTGAGGCCTT
ATGCCGACAGACTCTCGGCGGTAAACGCCATCGGTACGCAACTGCGTGAC
CTGATGAACACGGGGCTGACCCGGTGGCGGAAGTGGGAGGAATCCCGTGA
GTAAGCACCAGATTCAGCCCGAGTGTGGAGAATGCGCAGGCCGACGCGGG
ATGGAACGGCCGAACTCATCTCGCAGGACCAAATTCGCAGGCGCGAACGG
GGACAAGAAACAAATAATTTTCCCTGTTCAGCTGACCCCGAGTATCAGGA
TTGGCAACCTACTCTGCTATTATAGATTACATACATACCAGCCTATAGAA
AATCGTTTGTGGTACCCGGCAGGCAATGGGAGTGTGCACAGGTGATGCCC
GTCTACAGTGTTTTTCCAGAGAGCAAAATCGAGGAACTAGCTTTCCGCCT
CGCGTACCGAATGCCCCGCTGCGACGCGCCCGCCCTTTGCCCGCACAGGG
AGCGACGAAGAAGCGGACAAAGAAGAAGAAGGCCAGGAAGTCGTAAGAGT
TGCGAAACGTTGTAACGGTTCGACTACTTCCATGAGCTACGGCTTCTGCA
GAGGTCTCACTCCCCGCCACGACGTCGATCGACGCGTGATGGCGCGCCGT
CGGGAAACCGGAGCCATTGTAGGTGACCGCCCAATCCAAGCGTGATCGAT
CGTTGTAAGGGTCAACCCTGGGAACGTGCGCGCGGGGCTAGCGTCGCGGT
CGATACTGTGTTACTTGTACAGTAAATATGGAGGGATGTGTGTTTGCGTC
TCTCTTTCCTGCCTCCTCCCTTTTTT back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1030:8319..21144- >mRNA_F-serratus_M_contig1030.349.1 ID=mRNA_F-serratus_M_contig1030.349.1|Name=mRNA_F-serratus_M_contig1030.349.1|organism=Fucus serratus male|type=CDS|length=2820bp|location=Sequence derived from alignment at F-serratus_M_contig1030:8319..21144- (Fucus serratus male) ATGTGCGGGTTATTGTCATCGATGGTCGTAGCGTATGCTATGATGTGCGG GTTATTGTCATCGATGGTCGTAGCGTATGCTATGGCCAGCACGGCCACGA CCGTGTCAGCATTCACCCCGACAGTCTCAGGCCAGCACGGCCACGACCGT GTCAGCATTCACCCCGACAGTCTCAGCCCGTTCGCGATTCGTTCCATCAG CTCGCCATTGGACTTCAAAGGCCACCTCAGCGCGTCCCTCCGCCCGTTCG CGATTCGTTCCATCAGCTCGCCATTGGACTTCAAAGGCCACCTCAGCGCG TCCCTCCGCATCCGCGGGGGCACGGGGACTGAGGGCAGTAGTGGAACCGG GGATGCTAGGCGGGGTGGACCCTGTGTGGTTGCACCAGGTTTTCACAGCA TCCGCGGGGGCACGGGGACTGAGGGCAGTAGTGGAACCGGGGATGCTAGG CGGGGTGGACCCTGTGTGGTTGCACCAGGTTTTCACAGGGATCGCCGACG CTTCCGGGCCGGCGTTGGACCCCTCGAGCGCCACGGCAGCGACCTCTCTG CTGGCGGAGGGAGGCGGCTTGTTCGGCACGGGCCTGAACCTTAACCCCGT CGAGTTCCTCACGGCGATGACCGAGACGGCGATCACCGGGCTGCACGATA TGCTCCAGGGCTTGGGCGTGCCCTCGGCGTACGGTATCTCCATCATATTT TTCACGGTGTTTGTGAAGGCGTTAACGTACCCCTTGACGTACCAGCAGCT TGCTAGCACCACCAAGATGCAGGCGCTGGGACCCAAGGGATCGCCGACGC TTCCGGGCCGGCGTTGGACCCCTCGAGCGCCACGGCAGCGACCTCTCTGC TGGCGGAGGGAGGCGGCTTGTTCGGCACGGGCCTGAACCTTAACCCCGTC GAGTTCCTCACGGCGATGACCGAGACGGCGATCACCGGGCTGCACGATAT GCTCCAGGGCTTGGGCGTGCCCTCGGCGTACGGTATCTCCATCATATTTT TCACGGTGTTTGTGAAGGCGTTAACGTACCCCTTGACGTACCAGCAGCTT GCTAGCACCACCAAGATGCAGGCGCTGGGACCCAAGGTGAAGGAGCTCCA GAGCCGGTACGCCAACAATCCGGAGGCAGCTAACCAGGCGATCTCGCAGC TCTATCAGACGGAGAACGTGAACCCCCTGGCGGGTTGTCTGCCGGCCATT GCTCAGATCCCGATCTTCATCTCGCTGTACAGGTGAAGGAGCTCCAGAGC CGGTACGCCAACAATCCGGAGGCAGCTAACCAGGCGATCTCGCAGCTCTA TCAGACGGAGAACGTGAACCCCCTGGCGGGTTGTCTGCCGGCCATTGCTC AGATCCCGATCTTCATCTCGCTGTACAGATCTCTGCTGAACCTGGCCAAG GAAAACAAGCTGACGGAAGGCTTCCTGTGGATTCCAAGCCTAGAGGGGCC CACGTTCGACTCCCCACCCACAGAGATGATGAGCTGGATCAAGGAATGGA CCGATCTCTGCTGAACCTGGCCAAGGAAAACAAGCTGACGGAAGGCTTCC TGTGGATTCCAAGCCTAGAGGGGCCCACGTTCGACTCCCCACCCACAGAG ATGATGAGCTGGATCAAGGAATGGACCGATGGGGCGCCGAAGCTCGGCTG GCACGACACGCTGGCGTACTTGACGATTCCCGTGATCCTGGTGCTAACGC AGTCGGTTTCGATGAAGATTATGCAGCCGGCGAAGGACCCCAACGCCCCT GTGGACGACTCTCAGCAAGCCTCTCAGAATATGGGGCGCCGAAGCTCGGC TGGCACGACACGCTGGCGTACTTGACGATTCCCGTGATCCTGGTGCTAAC GCAGTCGGTTTCGATGAAGATTATGCAGCCGGCGAAGGACCCCAACGCCC CTGTGGACGACTCTCAGCAAGCCTCTCAGAATGTGCTCAAGTTCCTGCCG CTGTTGATTGGCTGGTTTTCACTCAGCGTGCCCTCGGCTCTGGGTCTGTA CTGGATCCTCAACAACTTCATTTCTACGACAACATCTGTCATCATCAGGA ACCAGGTGCTCAAGTTCCTGCCGCTGTTGATTGGCTGGTTTTCACTCAGC GTGCCCTCGGCTCTGGGTCTGTACTGGATCCTCAACAACTTCATTTCTAC GACAACATCTGTCATCATCAGGAACCAGATTGCGACCGAAATGGGCGATC CCTCCGCTGGCGCCCCCAAGATAGAGTTTCCGTCGCTGCCGTTCGGGGGG AAGGAGAGCGTTGAGGGAAAACAAGATCTGGAGGGGCCGGAAATCCTGGC GGCTACGGTCACGCGAGAAGGGCTTGAAGACAGATTGCGACCGAAATGGG CGATCCCTCCGCTGGCGCCCCCAAGATAGAGTTTCCGTCGCTGCCGTTCG GGGGGAAGGAGAGCGTTGAGGGAAAACAAGATCTGGAGGGGCCGGAAATC CTGGCGGCTACGGTCACGCGAGAAGGGCTTGAAGACAGCACTTCCAAGGG GTTCGGGGGACCGGAGGTGCTCGACGCTGAGTTAGGCGGGGACATCGTAT CGGAAGACGGGACGCCGGTCGCCGCGGTAGGCGCGGACCCCAAGTCCAAG CCCAAGCACTTCCAAGGGGTTCGGGGGACCGGAGGTGCTCGACGCTGAGT TAGGCGGGGACATCGTATCGGAAGACGGGACGCCGGTCGCCGCGGTAGGC GCGGACCCCAAGTCCAAGCCCAAGGGAGCGACGAAGAAGCGGACAAAGAA GAAGAAGGCCAGGAAGTCGTAAGGAGCGACGAAGAAGCGGACAAAGAAGA AGAAGGCCAGGAAGTCGTAA back to top
|