mRNA_F-serratus_M_contig103.329.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig103.329.1 vs. uniprot
Match: D7G0I3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I3_ECTSI) HSP 1 Score: 291 bits (746), Expect = 9.870e-93 Identity = 147/183 (80.33%), Postives = 164/183 (89.62%), Query Frame = 3 Query: 162 IASEYPDYHQIVSTPMDLGTIQENIRCGRYSSLEACAKDVRIVWTNAYLYNPPGSIVAENAHALSKMFEVKYNDINPSDFNYAREPNYDERHKFSRDIYRVEDSQLLEAVELLEKRCPEAVVRNNDDGYFVVKVDALPAPVFWEVELYLRKRLRNKPERTKKKIATTRRPAPESMARLSGRKR 710 +ASEYPDYHQIVSTPMDLGTIQENIR Y SLEACAKDVR VWTNAYLYNP S+VA+ A ALSK+FE YN INP+DFNYAREPN DER+K SRDIYRVEDSQL EAV+LLE+RCPEAVVR++++GYFVVKV+ALP+PVFWEVELYLRKRL N+P+RTKKKI TT RP P+SMARLSGRKR Sbjct: 1 MASEYPDYHQIVSTPMDLGTIQENIRQNVYPSLEACAKDVRTVWTNAYLYNPAKSVVAQGARALSKVFEGMYNKINPADFNYAREPNVDERNKLSRDIYRVEDSQLEEAVQLLEQRCPEAVVRDDEEGYFVVKVEALPSPVFWEVELYLRKRLCNQPDRTKKKIPTTFRPPPDSMARLSGRKR 183
BLAST of mRNA_F-serratus_M_contig103.329.1 vs. uniprot
Match: A0A7S1V4M0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V4M0_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 4.250e-15 Identity = 56/205 (27.32%), Postives = 102/205 (49.76%), Query Frame = 3 Query: 99 MSQLLQKLSQRDIAAIFKQPVIASEYP--DYHQIVSTPMDLGTIQENIRC---GRYSSLEACAKDVRIVWTNAYLYNPPGSIVAENAHALSKMFEVKYNDINPSDFNYAREPN-------------------------------YDERHKFSRDIYRVEDSQLLEAVELLEKRCPEAVVRNNDDGYFVVKVDALPAPVFWEVELY 605 M++L++ +R+ F++PV E DY QI+ TPMDLGTI++ ++ G Y +L+ CA+DVR+VW+N YN GS A LSK +E KY + D+ + + +E+ F++ +Y++ +L + L+++CP+A+++++ + + VD + VF E++ Y Sbjct: 12 MTKLVESFYKRNDTEPFREPVAFKELGLFDYPQIIKTPMDLGTIKKKLKSRNNGDYKTLQQCAEDVRLVWSNCMTYNADGSDFFVLAQGLSKKWEDKYAKL-LQDYGIQADASGGSXXXXXXXXXXXXXXXXXXXXTTNEAIVSLEEKRAFAKSLYKLTKEELGRILIELDQKCPQALLKSSSEDEMEMNVDKITRLVFDELKKY 215
BLAST of mRNA_F-serratus_M_contig103.329.1 vs. uniprot
Match: A0A1D1Z9E8_9ARAE (Transcription factor GTE10 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Z9E8_9ARAE) HSP 1 Score: 85.5 bits (210), Expect = 3.070e-14 Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 90 MKRMSQLLQKLSQRDIAAIFKQPV--IASEYPDYHQIVSTPMDLGTIQENIRCGRYSSLEACAKDVRIVWTNAYLYNPPGSIVAENAHALSKMFEVKYNDINPS----DFNYARE 416 +++ QLL++L Q + +F +PV + PDY+ I+ PMDLGTI+ + G Y+SL A DVR+ +TNA +YNPPG+ V A+ ++++FE+K+ I D N ARE Sbjct: 180 IRQCQQLLKRLLQHPFSWVFSEPVDIVKLNIPDYYTIIKHPMDLGTIKNKLTSGTYASLLDFASDVRLTFTNAKIYNPPGNDVHTIANEMNELFELKWKHIEKKIASLDSNVARE 294
BLAST of mRNA_F-serratus_M_contig103.329.1 vs. uniprot
Match: A0A1D1ZFF4_9ARAE (Transcription factor GTE8 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZFF4_9ARAE) HSP 1 Score: 85.5 bits (210), Expect = 3.600e-14 Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 90 MKRMSQLLQKLSQRDIAAIFKQPV--IASEYPDYHQIVSTPMDLGTIQENIRCGRYSSLEACAKDVRIVWTNAYLYNPPGSIVAENAHALSKMFEVKYNDINPS----DFNYARE 416 +++ QLL++L Q + +F +PV + PDY+ I+ PMDLGTI+ + G Y+SL A DVR+ +TNA +YNPPG+ V A+ ++++FE+K+ I D N ARE Sbjct: 180 IRQCQQLLKRLLQHPFSWVFSEPVDIVKLNIPDYYTIIKHPMDLGTIKNKLTSGTYASLLDFASDVRLTFTNAKIYNPPGNDVHTIANEMNELFELKWKHIEKKIASLDSNVARE 294
BLAST of mRNA_F-serratus_M_contig103.329.1 vs. uniprot
Match: UPI00098E0532 (transcription factor GTE10-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E0532) HSP 1 Score: 83.2 bits (204), Expect = 1.510e-13 Identity = 49/116 (42.24%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 60 RPGEQTEVDN-----MKRMSQLLQKLSQRDIAAIFKQPV--IASEYPDYHQIVSTPMDLGTIQENIRCGRYSSLEACAKDVRIVWTNAYLYNPPGSIVAENAHALSKMFEVKYNDI 386 RP Q DN MK+ +L KL +F PV +A + PDY+ ++ PMDLGTI+ I G YSS DVR+ +TNA YNPPG+ V A LSK FE K+ I Sbjct: 159 RPQPQPTTDNSYASIMKQCDSILNKLRTHQFGWVFNNPVDAVALKIPDYYTVIKHPMDLGTIKNKISSGAYSSPLGFVADVRLTFTNAMTYNPPGNDVHIMADKLSKFFESKWKPI 274
BLAST of mRNA_F-serratus_M_contig103.329.1 vs. uniprot
Match: A0A822YER0_NELNU (Uncharacterized protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822YER0_NELNU) HSP 1 Score: 83.2 bits (204), Expect = 1.560e-13 Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = 3 Query: 63 PGEQTEVDNMKRMSQLLQKLSQRDIAAIFKQPVIASEY--PDYHQIVSTPMDLGTIQENIRCGRYSSLEACAKDVRIVWTNAYLYNPPGSIVAENAHALSKMFEVKYNDI 386 P T+ MK+ LL++L + A +F PV A + PDY ++ PMDLGTI+ + G YSS A DVR+ ++NA YNPPG+ V A ALSK FE+++ I Sbjct: 202 PSSTTDAMLMKQCEALLKRLMSHNYAWVFNTPVDAVKLNIPDYFTVIKHPMDLGTIKSKLHSGAYSSPMGFAADVRLTFSNAMTYNPPGNDVHAMADALSKYFEMRWKPI 311
BLAST of mRNA_F-serratus_M_contig103.329.1 vs. uniprot
Match: A0A5P1EAK0_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EAK0_ASPOF) HSP 1 Score: 83.2 bits (204), Expect = 1.800e-13 Identity = 49/116 (42.24%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 60 RPGEQTEVDN-----MKRMSQLLQKLSQRDIAAIFKQPV--IASEYPDYHQIVSTPMDLGTIQENIRCGRYSSLEACAKDVRIVWTNAYLYNPPGSIVAENAHALSKMFEVKYNDI 386 RP Q DN MK+ +L KL +F PV +A + PDY+ ++ PMDLGTI+ I G YSS DVR+ +TNA YNPPG+ V A LSK FE K+ I Sbjct: 180 RPQPQPTTDNSYASIMKQCDSILNKLRTHQFGWVFNNPVDAVALKIPDYYTVIKHPMDLGTIKNKISSGAYSSPLGFVADVRLTFTNAMTYNPPGNDVHIMADKLSKFFESKWKPI 295
BLAST of mRNA_F-serratus_M_contig103.329.1 vs. uniprot
Match: A0A1U7ZCE8_NELNU (transcription factor GTE10-like n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7ZCE8_NELNU) HSP 1 Score: 83.2 bits (204), Expect = 2.070e-13 Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = 3 Query: 63 PGEQTEVDNMKRMSQLLQKLSQRDIAAIFKQPVIASEY--PDYHQIVSTPMDLGTIQENIRCGRYSSLEACAKDVRIVWTNAYLYNPPGSIVAENAHALSKMFEVKYNDI 386 P T+ MK+ LL++L + A +F PV A + PDY ++ PMDLGTI+ + G YSS A DVR+ ++NA YNPPG+ V A ALSK FE+++ I Sbjct: 202 PSSTTDAMLMKQCEALLKRLMSHNYAWVFNTPVDAVKLNIPDYFTVIKHPMDLGTIKSKLHSGAYSSPMGFAADVRLTFSNAMTYNPPGNDVHAMADALSKYFEMRWKPI 311
BLAST of mRNA_F-serratus_M_contig103.329.1 vs. uniprot
Match: A0A7S4F2T3_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F2T3_CHRCT) HSP 1 Score: 82.8 bits (203), Expect = 2.120e-13 Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 3 Query: 90 MKRMSQLLQKLSQRDIAAIFKQPV--IASEYPDYHQIVSTPMDLGTIQENIRCGRYSSLEACAKDVRIVWTNAYLYNPPGSIVAENAHALSKMFEVKYNDINPS 395 +++ +L+ + +D A F +PV +A PDY +IV PMDLGTI+ + Y S+E+ DVR+V++NA LYNPP S VA +A AL K FE K + P+ Sbjct: 18 LRQCGAILKAIKSKDKAGYFLRPVDPVALHIPDYPEIVKHPMDLGTIEAKLERSEYRSVESFIDDVRLVFSNACLYNPPASHVALSARALEKEFETKLDAFAPA 121
BLAST of mRNA_F-serratus_M_contig103.329.1 vs. uniprot
Match: UPI00053C869E (transcription factor GTE8 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C869E) HSP 1 Score: 82.8 bits (203), Expect = 2.620e-13 Identity = 47/101 (46.53%), Postives = 61/101 (60.40%), Query Frame = 3 Query: 90 MKRMSQLLQKLSQRDIAAIFKQPV--IASEYPDYHQIVSTPMDLGTIQENIRCGRYSSLEACAKDVRIVWTNAYLYNPPGSIVAENAHALSKMFEVKYNDI 386 MK+ LL+KL A +FK PV +A + PDY I+ PMDLGT++ N+ G YSS A DVR+ +TNA YNPPG V A LSK+FE ++ I Sbjct: 176 MKQCDALLKKLLSHPHAWVFKAPVDVVALKIPDYFTIIKHPMDLGTVRTNLTSGVYSSPLEFAADVRLTFTNAMTYNPPGHDVHIMADILSKLFESRWKTI 276 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig103.329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig103.329.1 >prot_F-serratus_M_contig103.329.1 ID=prot_F-serratus_M_contig103.329.1|Name=mRNA_F-serratus_M_contig103.329.1|organism=Fucus serratus male|type=polypeptide|length=383bp MFRPGEQTEVDNMKRMSQLLQKLSQRDIAAIFKQPVIASEYPDYHQIVSTback to top mRNA from alignment at F-serratus_M_contig103:62210..69822+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig103.329.1 ID=mRNA_F-serratus_M_contig103.329.1|Name=mRNA_F-serratus_M_contig103.329.1|organism=Fucus serratus male|type=mRNA|length=7613bp|location=Sequence derived from alignment at F-serratus_M_contig103:62210..69822+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig103:62210..69822+ >mRNA_F-serratus_M_contig103.329.1 ID=mRNA_F-serratus_M_contig103.329.1|Name=mRNA_F-serratus_M_contig103.329.1|organism=Fucus serratus male|type=CDS|length=2298bp|location=Sequence derived from alignment at F-serratus_M_contig103:62210..69822+ (Fucus serratus male)back to top |