mRNA_F-serratus_M_contig103.328.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig103.328.1 vs. uniprot
Match: D7G0I4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I4_ECTSI) HSP 1 Score: 186 bits (471), Expect = 2.680e-48 Identity = 150/374 (40.11%), Postives = 186/374 (49.73%), Query Frame = 2 Query: 326 ESQSTPGRMENLRVLIEEAKRAAAEGRLSASIRKYETALVTLPEAYKPRVQNKIAKLEARLEAEEEKKNGVGSPRSQSRFMRELQRGIGNTGACLGP-------LDLLHIAVKDVASSERLARARSVPSSRRSSPLARGPCSMTGSMHSSRVTSRERSDHERSPQDPSIVPVEEEGEKKEGGRIGERSENAAQEGDRXXXXXXXXXXXXXRERRVACDH-YAEGLVGYTGTFVSRLDVEEQSQEHAMGSCTASSGSAGGFPASSDIDSSVEGAWASDDEKPFGMEDCSQRERLRSINKALSGTLEKQVVDRMNQASYEELINLHGIGFRRAQRILRERAAAPFKGLADLSRIGMFPKQIEKMGKYNMLECLDLC 1423 E+ STPGRMENLRVLIEE K+AAAEGRL+A++RKYETA+VTLPEAYKPR++ KIA+LEA L+ EEE+ R+ + TG C LD+ + K ASS LA A S P RSP R R A DH +A G+ S+E + G+ G GG+ + G ++E+ F E +ERLR++N+ LSG LEKQVVD MNQAS EL +LHGIG RRAQ IL+ RAAAPF+ LADLSRIGM+PKQIEKMG++NMLECLD+C Sbjct: 78 ETPSTPGRMENLRVLIEEGKKAAAEGRLAAALRKYETAMVTLPEAYKPRLRKKIARLEALLDDEEERPRRSSPLARAFTGSRDAMPCVSGTGRCSASPNDQDVGLDMAGLGDKMSASS-LLATAASEPY--------------------------------RSPS---------------------------------------------RPRETAGDHDHARGV--------------SLSEEASPGA-----GEDGGYCGLGEA-----GPEEEEEEEQFDGESMDAQERLRAMNRGLSGKLEKQVVDIMNQASSAELTDLHGIGPRRAQLILQTRAAAPFETLADLSRIGMYPKQIEKMGRHNMLECLDVC 349
BLAST of mRNA_F-serratus_M_contig103.328.1 vs. uniprot
Match: A0A6H5JWP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP7_9PHAE) HSP 1 Score: 186 bits (473), Expect = 7.210e-48 Identity = 158/385 (41.04%), Postives = 202/385 (52.47%), Query Frame = 2 Query: 326 ESQSTPGRMENLRVLIEEAKRAAAEGRLSASIRKYETALVTLPEA-----------YKPRVQNKIAKLEARLEAEEEKKNGVGSPRSQSRFMRELQRGIGNTGACLGPLDLLHIAVKDVASS-------ERLARARSVPSSRRSSPLARGPCSMTGSMHSSRVTSRERSDHERSPQDPSIVPVEEEGEKKEGGRIGERSENAAQEGDRXXXXXXXXXXXXXRERRVACDHYAEGLVGYTGTFVSRLDVEEQSQEHAMG-SCTASSGSAGGFPASSDIDSSVEGAWASDDEKPFGMEDCSQRERLRSINKALSGTLEKQVVDRMNQASYEELINLHGIGFRRAQRILRERAAAPFKGLADLSRIGMFPKQIEKMGKYNMLECLDLC 1423 E STPGRMENLRVLIEE K+AAAEGRL+A++RKYETA+VTLPEA YKPR++ KI +LEA L+ EE++ G + S + ++ + + GPLDLL IAV+DVA + SRRSSPLAR TGS R S R P+I V + R+G++ ++ R R A D +HA G S + + A G + E+ F E +ERLR++N+ LSG LEKQVV+ +NQAS EL +LHGIG RRAQ IL+ RAAAPF+ LADLSRIGM+PKQIEKMG++NMLECLD+C Sbjct: 77 EPPSTPGRMENLRVLIEEGKKAAAEGRLAAALRKYETAMVTLPEARNRREDTHAAAYKPRLRKKITRLEALLDDEEDRAPGTPARLSS----KACRKAVHDLDKDPGPLDLLRIAVRDVAGAGXXXXXXXXXXXXXXXXXSRRSSPLARA---FTGS----RDAMTYMSGTGRCSASPNIQDVG-----LDMARLGDKMSASSV----LATAASEPYRSPSRPRETAGD-----------------------DDHAWGLSLSEETSPAAGEAGPEEXXXXXXXXXXV--EREFDGECMDAQERLRAMNRGLSGKLEKQVVNIVNQASSAELTDLHGIGPRRAQLILQTRAAAPFETLADLSRIGMYPKQIEKMGRHNMLECLDVC 416 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig103.328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig103.328.1 >prot_F-serratus_M_contig103.328.1 ID=prot_F-serratus_M_contig103.328.1|Name=mRNA_F-serratus_M_contig103.328.1|organism=Fucus serratus male|type=polypeptide|length=372bp MENLRVLIEEAKRAAAEGRLSASIRKYETALVTLPEAYKPRVQNKIAKLEback to top mRNA from alignment at F-serratus_M_contig103:54157..62022- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig103.328.1 ID=mRNA_F-serratus_M_contig103.328.1|Name=mRNA_F-serratus_M_contig103.328.1|organism=Fucus serratus male|type=mRNA|length=7866bp|location=Sequence derived from alignment at F-serratus_M_contig103:54157..62022- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig103:54157..62022- >mRNA_F-serratus_M_contig103.328.1 ID=mRNA_F-serratus_M_contig103.328.1|Name=mRNA_F-serratus_M_contig103.328.1|organism=Fucus serratus male|type=CDS|length=2232bp|location=Sequence derived from alignment at F-serratus_M_contig103:54157..62022- (Fucus serratus male)back to top |