mRNA_F-serratus_M_contig103.328.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig103.328.1
Unique NamemRNA_F-serratus_M_contig103.328.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig103.328.1 vs. uniprot
Match: D7G0I4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I4_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 2.680e-48
Identity = 150/374 (40.11%), Postives = 186/374 (49.73%), Query Frame = 2
Query:  326 ESQSTPGRMENLRVLIEEAKRAAAEGRLSASIRKYETALVTLPEAYKPRVQNKIAKLEARLEAEEEKKNGVGSPRSQSRFMRELQRGIGNTGACLGP-------LDLLHIAVKDVASSERLARARSVPSSRRSSPLARGPCSMTGSMHSSRVTSRERSDHERSPQDPSIVPVEEEGEKKEGGRIGERSENAAQEGDRXXXXXXXXXXXXXRERRVACDH-YAEGLVGYTGTFVSRLDVEEQSQEHAMGSCTASSGSAGGFPASSDIDSSVEGAWASDDEKPFGMEDCSQRERLRSINKALSGTLEKQVVDRMNQASYEELINLHGIGFRRAQRILRERAAAPFKGLADLSRIGMFPKQIEKMGKYNMLECLDLC 1423
            E+ STPGRMENLRVLIEE K+AAAEGRL+A++RKYETA+VTLPEAYKPR++ KIA+LEA L+ EEE+              R+    +  TG C          LD+  +  K  ASS  LA A S P                                 RSP                                              R R  A DH +A G+                S+E + G+     G  GG+    +      G    ++E+ F  E    +ERLR++N+ LSG LEKQVVD MNQAS  EL +LHGIG RRAQ IL+ RAAAPF+ LADLSRIGM+PKQIEKMG++NMLECLD+C
Sbjct:   78 ETPSTPGRMENLRVLIEEGKKAAAEGRLAAALRKYETAMVTLPEAYKPRLRKKIARLEALLDDEEERPRRSSPLARAFTGSRDAMPCVSGTGRCSASPNDQDVGLDMAGLGDKMSASS-LLATAASEPY--------------------------------RSPS---------------------------------------------RPRETAGDHDHARGV--------------SLSEEASPGA-----GEDGGYCGLGEA-----GPEEEEEEEQFDGESMDAQERLRAMNRGLSGKLEKQVVDIMNQASSAELTDLHGIGPRRAQLILQTRAAAPFETLADLSRIGMYPKQIEKMGRHNMLECLDVC 349          
BLAST of mRNA_F-serratus_M_contig103.328.1 vs. uniprot
Match: A0A6H5JWP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP7_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 7.210e-48
Identity = 158/385 (41.04%), Postives = 202/385 (52.47%), Query Frame = 2
Query:  326 ESQSTPGRMENLRVLIEEAKRAAAEGRLSASIRKYETALVTLPEA-----------YKPRVQNKIAKLEARLEAEEEKKNGVGSPRSQSRFMRELQRGIGNTGACLGPLDLLHIAVKDVASS-------ERLARARSVPSSRRSSPLARGPCSMTGSMHSSRVTSRERSDHERSPQDPSIVPVEEEGEKKEGGRIGERSENAAQEGDRXXXXXXXXXXXXXRERRVACDHYAEGLVGYTGTFVSRLDVEEQSQEHAMG-SCTASSGSAGGFPASSDIDSSVEGAWASDDEKPFGMEDCSQRERLRSINKALSGTLEKQVVDRMNQASYEELINLHGIGFRRAQRILRERAAAPFKGLADLSRIGMFPKQIEKMGKYNMLECLDLC 1423
            E  STPGRMENLRVLIEE K+AAAEGRL+A++RKYETA+VTLPEA           YKPR++ KI +LEA L+ EE++  G  +  S     +  ++ + +     GPLDLL IAV+DVA +                  SRRSSPLAR     TGS    R      S   R    P+I  V       +  R+G++   ++                  R R  A D                        +HA G S +  +  A G     +             E+ F  E    +ERLR++N+ LSG LEKQVV+ +NQAS  EL +LHGIG RRAQ IL+ RAAAPF+ LADLSRIGM+PKQIEKMG++NMLECLD+C
Sbjct:   77 EPPSTPGRMENLRVLIEEGKKAAAEGRLAAALRKYETAMVTLPEARNRREDTHAAAYKPRLRKKITRLEALLDDEEDRAPGTPARLSS----KACRKAVHDLDKDPGPLDLLRIAVRDVAGAGXXXXXXXXXXXXXXXXXSRRSSPLARA---FTGS----RDAMTYMSGTGRCSASPNIQDVG-----LDMARLGDKMSASSV----LATAASEPYRSPSRPRETAGD-----------------------DDHAWGLSLSEETSPAAGEAGPEEXXXXXXXXXXV--EREFDGECMDAQERLRAMNRGLSGKLEKQVVNIVNQASSAELTDLHGIGPRRAQLILQTRAAAPFETLADLSRIGMYPKQIEKMGRHNMLECLDVC 416          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig103.328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0I4_ECTSI2.680e-4840.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWP7_9PHAE7.210e-4841.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig103contigF-serratus_M_contig103:54157..62022 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRuvA domain 2-like
Ec32 orthologEc-20_002440.1
Exons10
Model size2667
Cds size1116
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig103.328.1prot_F-serratus_M_contig103.328.1Fucus serratus malepolypeptideF-serratus_M_contig103 55371..61673 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928833.1471748-UTR-F-serratus_M_contig103:54156..544161622928833.1471748-UTR-F-serratus_M_contig103:54156..54416Fucus serratus maleUTRF-serratus_M_contig103 54157..54416 -
1690962593.089677-UTR-F-serratus_M_contig103:54156..544161690962593.089677-UTR-F-serratus_M_contig103:54156..54416Fucus serratus maleUTRF-serratus_M_contig103 54157..54416 -
1622928834.047234-UTR-F-serratus_M_contig103:54428..553701622928834.047234-UTR-F-serratus_M_contig103:54428..55370Fucus serratus maleUTRF-serratus_M_contig103 54429..55370 -
1690962593.0991163-UTR-F-serratus_M_contig103:54428..553701690962593.0991163-UTR-F-serratus_M_contig103:54428..55370Fucus serratus maleUTRF-serratus_M_contig103 54429..55370 -
1622928834.8050284-UTR-F-serratus_M_contig103:61673..620221622928834.8050284-UTR-F-serratus_M_contig103:61673..62022Fucus serratus maleUTRF-serratus_M_contig103 61674..62022 -
1690962593.2107542-UTR-F-serratus_M_contig103:61673..620221690962593.2107542-UTR-F-serratus_M_contig103:61673..62022Fucus serratus maleUTRF-serratus_M_contig103 61674..62022 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928834.0599-CDS-F-serratus_M_contig103:55370..555211622928834.0599-CDS-F-serratus_M_contig103:55370..55521Fucus serratus maleCDSF-serratus_M_contig103 55371..55521 -
1690962593.1085002-CDS-F-serratus_M_contig103:55370..555211690962593.1085002-CDS-F-serratus_M_contig103:55370..55521Fucus serratus maleCDSF-serratus_M_contig103 55371..55521 -
1622928834.7045834-CDS-F-serratus_M_contig103:56077..561481622928834.7045834-CDS-F-serratus_M_contig103:56077..56148Fucus serratus maleCDSF-serratus_M_contig103 56078..56148 -
1690962593.1198118-CDS-F-serratus_M_contig103:56077..561481690962593.1198118-CDS-F-serratus_M_contig103:56077..56148Fucus serratus maleCDSF-serratus_M_contig103 56078..56148 -
1622928834.720595-CDS-F-serratus_M_contig103:56602..566741622928834.720595-CDS-F-serratus_M_contig103:56602..56674Fucus serratus maleCDSF-serratus_M_contig103 56603..56674 -
1690962593.1415834-CDS-F-serratus_M_contig103:56602..566741690962593.1415834-CDS-F-serratus_M_contig103:56602..56674Fucus serratus maleCDSF-serratus_M_contig103 56603..56674 -
1622928834.7341423-CDS-F-serratus_M_contig103:57022..573671622928834.7341423-CDS-F-serratus_M_contig103:57022..57367Fucus serratus maleCDSF-serratus_M_contig103 57023..57367 -
1690962593.1535418-CDS-F-serratus_M_contig103:57022..573671690962593.1535418-CDS-F-serratus_M_contig103:57022..57367Fucus serratus maleCDSF-serratus_M_contig103 57023..57367 -
1622928834.7482386-CDS-F-serratus_M_contig103:57760..578961622928834.7482386-CDS-F-serratus_M_contig103:57760..57896Fucus serratus maleCDSF-serratus_M_contig103 57761..57896 -
1690962593.1725497-CDS-F-serratus_M_contig103:57760..578961690962593.1725497-CDS-F-serratus_M_contig103:57760..57896Fucus serratus maleCDSF-serratus_M_contig103 57761..57896 -
1622928834.7611947-CDS-F-serratus_M_contig103:58223..583851622928834.7611947-CDS-F-serratus_M_contig103:58223..58385Fucus serratus maleCDSF-serratus_M_contig103 58224..58385 -
1690962593.180641-CDS-F-serratus_M_contig103:58223..583851690962593.180641-CDS-F-serratus_M_contig103:58223..58385Fucus serratus maleCDSF-serratus_M_contig103 58224..58385 -
1622928834.7709384-CDS-F-serratus_M_contig103:58928..589991622928834.7709384-CDS-F-serratus_M_contig103:58928..58999Fucus serratus maleCDSF-serratus_M_contig103 58929..58999 -
1690962593.187951-CDS-F-serratus_M_contig103:58928..589991690962593.187951-CDS-F-serratus_M_contig103:58928..58999Fucus serratus maleCDSF-serratus_M_contig103 58929..58999 -
1622928834.7816207-CDS-F-serratus_M_contig103:59648..597421622928834.7816207-CDS-F-serratus_M_contig103:59648..59742Fucus serratus maleCDSF-serratus_M_contig103 59649..59742 -
1690962593.1952689-CDS-F-serratus_M_contig103:59648..597421690962593.1952689-CDS-F-serratus_M_contig103:59648..59742Fucus serratus maleCDSF-serratus_M_contig103 59649..59742 -
1622928834.7918842-CDS-F-serratus_M_contig103:61659..616731622928834.7918842-CDS-F-serratus_M_contig103:61659..61673Fucus serratus maleCDSF-serratus_M_contig103 61660..61673 -
1690962593.2031722-CDS-F-serratus_M_contig103:61659..616731690962593.2031722-CDS-F-serratus_M_contig103:61659..61673Fucus serratus maleCDSF-serratus_M_contig103 61660..61673 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig103.328.1

>prot_F-serratus_M_contig103.328.1 ID=prot_F-serratus_M_contig103.328.1|Name=mRNA_F-serratus_M_contig103.328.1|organism=Fucus serratus male|type=polypeptide|length=372bp
MENLRVLIEEAKRAAAEGRLSASIRKYETALVTLPEAYKPRVQNKIAKLE
ARLEAEEEKKNGVGSPRSQSRFMRELQRGIGNTGACLGPLDLLHIAVKDV
ASSERLARARSVPSSRRSSPLARGPCSMTGSMHSSRVTSRERSDHERSPQ
DPSIVPVEEEGEKKEGGRIGERSENAAQEGDRDREREQVEEEGEERERRV
ACDHYAEGLVGYTGTFVSRLDVEEQSQEHAMGSCTASSGSAGGFPASSDI
DSSVEGAWASDDEKPFGMEDCSQRERLRSINKALSGTLEKQVVDRMNQAS
YEELINLHGIGFRRAQRILRERAAAPFKGLADLSRIGMFPKQIEKMGKYN
MLECLDLCPGRPELDLAPKTP*
back to top

mRNA from alignment at F-serratus_M_contig103:54157..62022-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig103.328.1 ID=mRNA_F-serratus_M_contig103.328.1|Name=mRNA_F-serratus_M_contig103.328.1|organism=Fucus serratus male|type=mRNA|length=7866bp|location=Sequence derived from alignment at F-serratus_M_contig103:54157..62022- (Fucus serratus male)
AACTGACAGCTCACAATACTCCTGTACGAACACAGGTAGTGCTCTCGAGC CTTTGCTTGTTGTCTAAAGGTTCCGTGGACAGCAATCGACCTGAGCGTGA AAAGCAAGAGTCTGGTGAGCCCATGAGCAGCTCTAACTCTCTCTTGGAAT CACTGAGGAAATCGCCCCTCGAACCCCTCCACGACCATTATCGACGATAA GCTGCTACAATGGAATCAATATTCCCTCGGACTTCAAGACGAGCGATCTT ACGTCTGGGAGTGGCCGAAAGGACGGGAAAACGAGCCCCGCCCTCGAGCC CAGCTTCAATAAAGAAAGCCCGCGCGAAAGTCAGAGTACGCCGGGGCGAA TGGAGAATCTCAGGTGATGCAGTAGAACGTTTCATCAGTACAAGTACGTG TACTACTACTGGTACGGTACTGTCTTGTGTACTGTTTTGTGTACTGTCTT GTAAGATGAGAGGAGGTCGCCAATAAAAAGGCGCGGTAGGGATAAAATAC CGTTGGTCCAAACCCAATCACATCTGGCGAAATCTGATGTAGCTCTTGAG CCTCAATGCGGGGCGGTCTATTATAGCTCATGAGGCATTCAAGCCGCCGC TGGGTAAGTTGATTCGACGCCAATATATTTCCTTTTCTCCATCTCGGTTT TGCGCGGATGTGTAGATACAATACTCGCACAGTAGATTTTTGGTACCAAA GTCGCAGAGAAATTATCTATAGTGGCAGTTTATGAAAATCACCATGCCCT ATGTAGCCGCTTTAGTCTAGACTGTTGTACAGCCAGTATAACGCAGAGTT GTATTTTGCCCTGAACAGGACTACAGACTTACGATGCTGTTCTCGGCCAT GCATACGGAGTTTTACGCACAGTATCTAGACCTTCTGACCCAGTCAAGGG GAACAGTATCAAAACGTTTACTTGTAGGTGGGACGAGGGATCATAGGCTG CAAAGACAAAATCTACTGTGTCGTTGTTCAATCCCTGGTACAGTAGTACA GTAATAACTTGTTCCTTTACCTGTAGACTCGAGAGATTACCATCTACTGG CACTGTGTCCAGGTACTGTTGAAGTCATACCAGGTACCTGGTACGTAGAT TATTATTTTTACTTCAGACCAAACCTAGACCTCCTTCTGATTTGTTTATT TTGTTTTTGTTTTGTTTTTAAAGAAAATTCAGAACGCGGCTATCCCTTCT GAGCATCCCCCAGTCAGGAGGAAAATGTCAAAACGTTTAGGTGGGATCAT AGGCTGCAGATGTCCTTGTTGGAGCTTTGTAGATGTTCATCGTATCTTTT CCTGTCCAGCATACCACGTACCGCATTGGCAACCACGTGAAGAAAACAAC AACATCCAACGAACATGACGTCCAGAATAAATGGGAAGAAAACACACAGC ACACATGGTTGAGGCCCGATCAGTTAATGTGAAGAACGCACAACCTGTTG GCGTATACGGGGAGGGGTGGGGAGATCTTTAGTGGCCACAGGCATAAACA GGATAACAACGTTGCAGCAGGTGGGAGTAGTACCGGTAACTTAGCATGTT GAGCCCCATCGGCCCCATCGGCCGTAAGTGAGATACAATACGACACAAAG TCAGTATATACTTGTATTAATTAGAGGGCAATAACCGGGATGGGGTGTGT TTTTGTATTAATGGACACCTTACCTGGACACCCGATGTGACCAGACATCG AAAACATAAAGAACCGTACTTCTTCGGTATAATATTAAAACAACTGTAGA GTAGTACCAGGTATCATATACTGGTAGCGATTATGTTTAATGCGAACGTT CGACGCAAGAAAACGACAACATGCGCAGTAGAACGCTTCGTCAAGTATAG TACTACTGACTGTATAGTATAGTATAGTAGCCGTAGCTGAGTTTGCACGT TATATATATATATATATATATATTATATATATATTTTAATCACACTTATA GCCGACGGATCTCTAATTACCATCCTGCCTGTGGTCACAAAGGATCTTCC CATCTCTCCCCGGCGCACGCCTTACAATTTTTATCGCGATGCAAGTTCAG CACTCTTACAACTCGTCAACCAATGGTTGAATTTTACTTACTCACGTTCC CACGCTTTCCGTTACGAAAGAAAGAACACAAATTCTGCTTAAGCTAAGAA TCGAACTCGCGACTTCCGCACTAGCAGGTATGCAGATTACCTACTAGACC ACTCGGGCTTGTAACTATTAATAATGACAAGCGCTATGATAACTCAGCTA GGTTTCGGGACTCCCCGACCACCACACCAGGGTTTTGATCGAGGAGGCGA AGAGAGCGGCCGCGGAAGGTCGGCTTTCTGCGTCGATTCGAAAGTACGAG ACCGCTCTCGTCACGTTGCCAGAGGTAAGAGGTAACACGGGAAAGTGGAC GGAAGGGGGAGACACAGCTTCCCTTCAGCTGACCTGATCCTTGGAAAAAA AAGCCTAAAACACTTTCAACATTATCGTGGAGCTTTCTTGGAGACCTCAC AACTATGTATTACGACCAGTGATGATAGAAACACGTTAAAAAACTATTAA TAGTACGAGGTACAGCTCTCGCTGAATCCTGCCATGACCCGACCCGACCC GACCACAGCGCAGTTGGCGGTCTTGTGAGCTGTAGTCGCCACTTGTGTTG CTAAACAAATCGCCCTGGGCAAAGCCCCCGTAAGGCTCCACCAAGCATAA CTTGGATGCACAGCACAGGCGGCCCTCGTTGGGACTGCGACAGCGACGGT TGGTATCAATACGCACTATCACAATCGGTCTCCATCGATTCATTGGTATC CACTCAACGTCGACAGCGTGCACGTATGGTCTTGAGCGAGGTATCATATA ATGATTTCGAATATGATGCTAATTTTTGCGCACGTGAGTCACAGGGACGT GCTGTCCGACGTTTCTGGAATGGAATCGAAATATAACGTCTGAGATGGGA GCAGTACATATCTATCTCGATTTCATCGCTCCCCATGCTCACCGGGTCGC AACCCCTTTTTGCCTCGCGCCAGGCGTACAAGCCGCGGGTTCAAAACAAG ATCGCGAAGCTGGAGGCGAGACTGGAAGCCGAAGAAGAGAAAAAGTGAGA TGGAGCGCTTCGAGTGAAAAGTGCGCCGGACGTGGTCCGTCAAAGCTTTT TCTGCCCGTTGCTGACGCTGTTGTGGAGTACCGTGGCACTGCTGTGACAC CGAAAACTATTGACCCCCTTTTCACGTGTTCCTGTGTTTTAACCTAAGCC GTGCAGTCCAACGGGGGCATGGCACGATCGCCCCCGGCCGAGACCCGTGC GTTTTGTAGCTTTAAGGCGTTTCCTTCCGAGAGCTGTTCTGATGTTGCAC ATCGATCATCGATGTCATCGACAGCTTCAGCAGCCTTTTCGGTTCGAATT GTGGTATTGTGGTATTGTGGTATTGTGGTTTTGTGGTTCCGAAGTTTCGT ACAGTATTTGCTACATAGCCCAAACCACCGTGATTTTGGGCGAACAGCTA CAGGCAAGAAAGTAACCAGGGCTCTCGGAAAAGATCGCAAGAAAACATGA GCAGCTTATTTCTGGTCGAATGACCGCGACGTTATTACTGTATGTTCTCT CTTGCAACGTCATCAAACCGTTATTGACCCTTCCTAGGAACGGAGTCGGC TCACCCCGTTCGCAATCACGATTTATGAGAGAACTACAACGCGGAATTGG AAACACCGGAGCATGCCTCGGTCCTCTGGATCTGTTGCACATAGCCGTCA AGGACGTAGCTAGCTCTGAACGACTGGCCCGCGCGCGGTCGGTGCCAAGG TGTGTTACAGGACGTCAAAGGGCGCATCGTCTTTTCGTTTTCGCTCCGCC TCGTATTTGTCTCGTATTGATCATATCGCATCTTCGAACACAGGAGGGCG AAGGCAGATTAGATGACCCTTTCAATAGGACATTTTGATATTTTCGCCTT TATCGACAGAGATTTGATACTGCCCCACCGCAAGTAGTACCAGGGTATCT CTTTTGTCTGTGTCTCGCGTTCTCTCTCGGAGCGATCTTCATATATCTTC TGTTTTTTCATCAGCCGATCCAGGCTCATCGCGCCCGACAAAACCCCACC CTGCGTCCCACACTCCGACCGGTAAGCTCCCGGCGGTCTTCGCCGCTCGC CCGCGGACCGTGCTCGATGACTGGAAGCATGCACTCGTCAAGGGTAACAT CTCGTGAGAGGAGCGATCACGAACGGTCGCCGCAGGATCCCAGTATTGTT CCTGTCGAGGAGGTGAGCGCGGTGGACGTTAAACTCTGGGATATTTCGCA CGGAAGTCTTGTCACGTGATTTCGGTTGCTTCGGTGTTTTTATGATTCGA GGCGGATCGGGTATTTTCCAGATCCAACGCGAAGAGTCCTAGGAGACAAA GCGAAGCTAAAAATACGAGACAGAGCTAGAACAAAGCGAAGCTAAAAATA TGTGGTTACGTCATCATGAACGCCACAAGTGCTTGAATGGCTACGGAACA TGAACGACTTGATGGCGATATCCAAGAGATATTTTAGCTTTACGAGGAAC CAGTCCTCCTCCGTGAGCGGCCACATGCTAAGACACAGAACGTTTGTTCC GCACGTGTCGGCCCGTATCATCATATCATCTCAACGATTACGGCGGGAGA AATAGGAAGGCGAAAAGAAGGAGGGTGGGAGGATCGGAGAAAGGAGTGAG AATGCGGCTCAAGAAGGAGATCGAGATCGAGAGCGAGAGCAGGTGGAGGA GGAGGGTGAGGAAAGGGAGAGGAGAGTTGCATGTGATCACTATGCCGAGG GACTCGTCGGATATACCGGAACGTTCGTATCGCGCTTGGACGTGGAAGAG CAAAGCCAGGAACACGCGATGGGCTCTTGTACCGCGTCGTCGGGCTCCGC GGGAGGCTTTCCGGCGTCGTCTGATATCGATTCGAGCGTGGAGGGCGCGT GGGCTTCGGATGATGAAAAGCCCTTCGGAATGGAAGACTGTAGTCAACGG GTGAGGGAGACTAAAGAGATTACACACCGGTCGGATTTCAGGGGGGGAAT CTGAACCATAGACCATCGCTTGTTTTCCTGTCTACTCTGTACCTCGGGGA ATTTTCTTCGTACTAAAGGAGCGAGTTAACCAGGGCAAGTTCCACAGAAT TGGAACATGATAGTGGCTTGGTCGTGAGTGAACGTGTTACTCATCCTCGA GCAAGGGATTGTGGCGCTCGATTGTCCGCTGCAGCAGTGATGCCGGACAA AGTAGTCGTCATTCCTCTCTGAAGGATGGTAAAAAGGTTCTTACGCAGCT GTCGTGCAGAGTATTCAATGAAGAATTCCGCGCTGTTGTGAACCCCAGGA ACGGTTGCGCTCGATCAACAAGGCTCTCAGCGGCACACTCGAGAAGCAAG TCGTAGACCGGATGAATCAGGTGACCAGCGGGTAAACGACCTCGAGGTTC AGATCCTCCTCCTCCTCCCGTCGATATTTTGTATTGAACGGTGAGGCTCA CGAGCCTATGAATATGCAATGTACGATTGTGAATATATGATGCTGTGTCA GTAGCGAGCTACCAAAAGAAATAAAAGAAATACAAGCGTTTGTTTGTATG CTGAAGCTCTTAATGATAGCGCACGACCGAGGGTTTTTGGCATTGTTGAT ACCGCACCAGATATGGCGGCTTGTATGTTGCGGGTCTGTCTCCGTGTTGC TTTCGTACCGCATCAAATCGGCGAGCAACCGACCTAGGGCAGCAAAGGGA TAGAGCGGCCGGTGGGCTGTTGCAACGGGTATATAATTACTCTTCACGTT GAGGCTTCCTGACGACTCCCGCCTGCCTGTGTATACTCGCTCATTTCACG ACGATTGGCTCGTTTCGCGCTCAGGCTAGCTACGAGGAACTGATCAATCT GCATGGGATCGGATTCCGCCGAGCGCAGCGTATTTTGAGGGAAAGGTGAA CGCCATGCAATCTTATCTCCATACATGGTCGATTAACTAGGGCACCACCT CAAGCTAACATGCGCATGCGACCAGGAAACGATTACACCAACCCCTCACT ATCGAGTGCTTCATCGTGTTGGCATCCATACATTGTTATTTTATGTGTTC CCTGCGCGTCTCTTCATCCTACCCATCCTTTCTGGCTTTTTTTGTTTTTT GTTTGTTTGTCGCTTTCGTTTTTATGTTCTCTTTGGAGCTTTGTAGATGT ATGTTCCTCTGATCTTTTCCTGTCCAGTAGACCAGTAACATATTGGAAAA GGAAGCGACCTTGCCTCGCACTGAATGCCTCGATGACACGTTCTTTCAAT GCGTGGGGGATAAACTTCGTGCGACCTCGAAATCGGTGGCGTTTATCGAA CACGACGTGGTCGATGGATAGGGATTTTCAATGTAGTGATCGCTTTCGTT GCTAATCCGTGTGCCGTCCGCCTTTTCTTGCCCGTCTCCACTGGCCTCTA CGACATCTACGACATCTACGACAACTACGACACCAACAATGTTTGATGCA GGGCCGCCGCCCCCTTTAAAGGCTTAGCCGATCTCTCTCGCATCGGTATG TTCCCAAAACAGATCGAGAAGATGGGCAAGTACAACATGCTTGAGTGTCT CGATCTGTGCCCGGGCAGGCCCGAACTCGACCTCGCTCCGAAGACCCCCT GAGAGCTTGGGGACGCGTGATTCGTCATTCGCTTACGTGAGGGTTTCGAC CTGCGTCGTAGCCGAGCCACGATCCACTATGAGCGAGTTTTGTTTGATGA GCAAAAGAACAACATGGACCCATGCTGAATCGGAGAGCACATTATATTCC CAGGACACGGGTTTGAGCAGCGCCTAAACAGGGCTGCTTGATGCCTAACT GACGGTAAAAAGCGTATCAATTGCTATTGCTATTGCGACGATGAGCTACG TTACTAAGTAGTGTCTGATTTGGAAATCGTCGTACATTTTGTCGCGGTTT TCGAGAGGAAAGCCAGTGACGAACGGTTACATATAGCGTGAATCGTGTTT TGGTATGTATGTATGGTCATCACATATAGCAGAGTATGGATCGACCGGGT AAGGTTGCCAACCCTGCTCGTGGTCAGCTGAACAGGGACAAATAATATTC TCCTGTCCCGTGTGTGCCTGAGAATCTGGTCTCGCGAGACGGGTTCAGCC GTCCCGTCTCGCGTTAGCCTGCTCATCTCCATACTAAGGCTGAATCTGGT GCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGCGTCCATTTGTGAA ACCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCGGGTCACGCAATTG CGTACCGACGGCGTTCACTGACGAGAGTCCGCCGGCACATGGACAGTAAA CCTCAAGGTAGTTCCGAACGGGTGCTGCCTTGGCAGGTCACCATGGAGCA ATTGATATTCGCCTCTCTTTCCCACACCCTAACATTTTAAGAAAACCATA CTCGAGAGTTTACAAATTTCACTGCGAATCGCGAACAGCGCACTTGATCC TGGACAAAAGCGGGTTCTACGAATTCTTAGGAGATGAAAGGGTTGAAATG CGCGGCCTGTCCATCGTCATGTATATTCCACGGAAACGACCACGGAAACG ACCACGTAGACGGTTAATGACACAAAAAGGTATAGGACAGTGTGAAAAGG AAGGTATAGGACAGCTGCAGGTCCAAGGCAGCGTGGGCGAGGGCAGAGGA AAAGACGTCCGAGAATGGACAGAAGAGAGAGGCGGGCAAAGTTGAGGTTG CACCTGGGGAAGGTTTGAGACGTTTTAAAGCTGCGCTGACGGATACGATA CCATAAGATAGGGGTGTTCGATGTGTAATAATACCTTTGGGTGCAGACGC GAGGTAGTTGCGGTCA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig103:54157..62022-

>mRNA_F-serratus_M_contig103.328.1 ID=mRNA_F-serratus_M_contig103.328.1|Name=mRNA_F-serratus_M_contig103.328.1|organism=Fucus serratus male|type=CDS|length=2232bp|location=Sequence derived from alignment at F-serratus_M_contig103:54157..62022- (Fucus serratus male)
ATGGAGAATCTCAGATGGAGAATCTCAGGGTTTTGATCGAGGAGGCGAAG
AGAGCGGCCGCGGAAGGTCGGCTTTCTGCGTCGATTCGAAAGTACGAGAC
CGCTCTCGTCACGTTGCCAGAGGGTTTTGATCGAGGAGGCGAAGAGAGCG
GCCGCGGAAGGTCGGCTTTCTGCGTCGATTCGAAAGTACGAGACCGCTCT
CGTCACGTTGCCAGAGGCGTACAAGCCGCGGGTTCAAAACAAGATCGCGA
AGCTGGAGGCGAGACTGGAAGCCGAAGAAGAGAAAAAGCGTACAAGCCGC
GGGTTCAAAACAAGATCGCGAAGCTGGAGGCGAGACTGGAAGCCGAAGAA
GAGAAAAAGAACGGAGTCGGCTCACCCCGTTCGCAATCACGATTTATGAG
AGAACTACAACGCGGAATTGGAAACACCGGAGCATGCCTCGGTCCTCTGG
ATCTGTTGCACATAGCCGTCAAGGACGTAGCTAGCTCTGAACGACTGGCC
CGCGCGCGGTCGGTGCCAAGGAACGGAGTCGGCTCACCCCGTTCGCAATC
ACGATTTATGAGAGAACTACAACGCGGAATTGGAAACACCGGAGCATGCC
TCGGTCCTCTGGATCTGTTGCACATAGCCGTCAAGGACGTAGCTAGCTCT
GAACGACTGGCCCGCGCGCGGTCGGTGCCAAGCTCCCGGCGGTCTTCGCC
GCTCGCCCGCGGACCGTGCTCGATGACTGGAAGCATGCACTCGTCAAGGG
TAACATCTCGTGAGAGGAGCGATCACGAACGGTCGCCGCAGGATCCCAGT
ATTGTTCCTGTCGAGGAGCTCCCGGCGGTCTTCGCCGCTCGCCCGCGGAC
CGTGCTCGATGACTGGAAGCATGCACTCGTCAAGGGTAACATCTCGTGAG
AGGAGCGATCACGAACGGTCGCCGCAGGATCCCAGTATTGTTCCTGTCGA
GGAGGAAGGCGAAAAGAAGGAGGGTGGGAGGATCGGAGAAAGGAGTGAGA
ATGCGGCTCAAGAAGGAGATCGAGATCGAGAGCGAGAGCAGGTGGAGGAG
GAGGGTGAGGAAAGGGAGAGGAGAGTTGCATGTGATCACTATGCCGAGGG
ACTCGTCGGATATACCGGAACGTTCGTATCGCGCTTGGACGTGGAAGAGC
AAAGCCAGGAACACGCGATGGGCTCTTGTACCGCGTCGTCGGGCTCCGCG
GGAGGCTTTCCGGCGTCGTCTGATATCGATTCGAGCGTGGAGGGCGCGTG
GGCTTCGGATGATGAAAAGCCCTTCGGAATGGAAGACTGTAGTCAACGGG
AAGGCGAAAAGAAGGAGGGTGGGAGGATCGGAGAAAGGAGTGAGAATGCG
GCTCAAGAAGGAGATCGAGATCGAGAGCGAGAGCAGGTGGAGGAGGAGGG
TGAGGAAAGGGAGAGGAGAGTTGCATGTGATCACTATGCCGAGGGACTCG
TCGGATATACCGGAACGTTCGTATCGCGCTTGGACGTGGAAGAGCAAAGC
CAGGAACACGCGATGGGCTCTTGTACCGCGTCGTCGGGCTCCGCGGGAGG
CTTTCCGGCGTCGTCTGATATCGATTCGAGCGTGGAGGGCGCGTGGGCTT
CGGATGATGAAAAGCCCTTCGGAATGGAAGACTGTAGTCAACGGGAACGG
TTGCGCTCGATCAACAAGGCTCTCAGCGGCACACTCGAGAAGCAAGTCGT
AGACCGGATGAATCAGGAACGGTTGCGCTCGATCAACAAGGCTCTCAGCG
GCACACTCGAGAAGCAAGTCGTAGACCGGATGAATCAGGCTAGCTACGAG
GAACTGATCAATCTGCATGGGATCGGATTCCGCCGAGCGCAGCGTATTTT
GAGGGAAAGGCTAGCTACGAGGAACTGATCAATCTGCATGGGATCGGATT
CCGCCGAGCGCAGCGTATTTTGAGGGAAAGGGCCGCCGCCCCCTTTAAAG
GCTTAGCCGATCTCTCTCGCATCGGTATGTTCCCAAAACAGATCGAGAAG
ATGGGCAAGTACAACATGCTTGAGTGTCTCGATCTGTGCCCGGGCAGGCC
CGAACTCGACCTCGCTCCGAAGACCCCCTGAGGCCGCCGCCCCCTTTAAA
GGCTTAGCCGATCTCTCTCGCATCGGTATGTTCCCAAAACAGATCGAGAA
GATGGGCAAGTACAACATGCTTGAGTGTCTCGATCTGTGCCCGGGCAGGC
CCGAACTCGACCTCGCTCCGAAGACCCCCTGA
back to top