mRNA_F-serratus_M_contig1027.324.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1027.324.1 vs. uniprot
Match: D8LGW6_ECTSI (Centrosomal protein POC5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGW6_ECTSI) HSP 1 Score: 206 bits (523), Expect = 4.890e-58 Identity = 130/219 (59.36%), Postives = 153/219 (69.86%), Query Frame = 3 Query: 966 ANAGLVARADVLAERLSGLRARTSKSSAVARCLSAWRANATRCRKERARNVAAGEHARLKLTTRTFRAWKLETRRAGNLRSKKAADLKLHTVSKEIVERYEAELFATRAALDEANNQIALEKARQREMEEGMRRTLARGMSAMNMEAMQLLNETREAGSGLLGYTGASA--GTRVSIVTATTAPRPGSA-------RQRMPEECPRPMAPPRPAVPSSR 1595 AN L +A+V ERLS L ART S +ARCL AWR A R R ER++NV AG+HAR KL +RT AW+ ETR+ N R +K ADLKLH +SKEI+ RYE EL +TRAALD+A +QIALEKARQREMEEGMRRTL RGMSAMNMEAM+L+ E R+AG G +G +A GTR S T AP G+ R+ EE PRP+ PPRPAVPSSR Sbjct: 3 ANTVLEGKAEVFGERLSALHARTHGGSYLARCLCAWRGEAARIRAERSKNVTAGDHARRKLMSRTLGAWRGETRQRINSRGRKEADLKLHAISKEIIGRYETELSSTRAALDDAISQIALEKARQREMEEGMRRTLLRGMSAMNMEAMRLMTEARDAGEDEFGLSGTTATTGTRYSA-GGTDAPSFGARAAAGAAHHSRLSEEWPRPLTPPRPAVPSSR 220
BLAST of mRNA_F-serratus_M_contig1027.324.1 vs. uniprot
Match: A0A7R9YBP3_9STRA (Centrosomal protein POC5 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBP3_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.830e-5 Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 1218 ADLKLHTVSKEIVERYEAELFATRAALDEANNQIALEKARQREMEEGMRRTLARGMSAMNMEAMQLLNETREA 1436 A +L V K I++RYEAEL R L EAN QI ++R++EE +R+TL RGMS+M +EA+ L T EA Sbjct: 380 AKKQLQEVCKGIMQRYEAELLKMRQQLAEANEQIDRGVRQRRQLEENLRQTLMRGMSSMQLEALDLFRSTAEA 452 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1027.324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1027.324.1 >prot_F-serratus_M_contig1027.324.1 ID=prot_F-serratus_M_contig1027.324.1|Name=mRNA_F-serratus_M_contig1027.324.1|organism=Fucus serratus male|type=polypeptide|length=512bp MGDSSEELSFRALTSVREVAEEDAWRTSRQKLASKQHNKLHRGSFHHRSLback to top mRNA from alignment at F-serratus_M_contig1027:32914..51315+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1027.324.1 ID=mRNA_F-serratus_M_contig1027.324.1|Name=mRNA_F-serratus_M_contig1027.324.1|organism=Fucus serratus male|type=mRNA|length=18402bp|location=Sequence derived from alignment at F-serratus_M_contig1027:32914..51315+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1027:32914..51315+ >mRNA_F-serratus_M_contig1027.324.1 ID=mRNA_F-serratus_M_contig1027.324.1|Name=mRNA_F-serratus_M_contig1027.324.1|organism=Fucus serratus male|type=CDS|length=3072bp|location=Sequence derived from alignment at F-serratus_M_contig1027:32914..51315+ (Fucus serratus male)back to top |