mRNA_F-serratus_M_contig1024.316.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 189 bits (480), Expect = 7.180e-50 Identity = 123/304 (40.46%), Postives = 175/304 (57.57%), Query Frame = 3 Query: 105 AQCNPRLNSSLEVHGAHQQSFSQPAGGVLVKTTFSSTFRLVFLVGLEGSGHHYLTPAVNHIRPTGDD-----DHDYCNELKLMYKRLGIKQSMTKSPSHYRERIEDARGYMQTLAQYASSLRSKEAGAMLCDKNSYPRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRKFYENLTEQDST---SKGYMEYMRILFTVITVMQSFLAGLDSKFVVCHDFDYLGDLGQASKIARHVAPRKELERELVDSLLRDTPKPSLGKEEPFEFEHAEFVVTRLQRQLDTFEFLYC 992 A NP + S +V + S + +L KT S FRLVF+ GLEG+GHHY+ A + GD+ + + E+ Y L + Q++ + +E+ M+ LA++A++L S A SYP SG KV Y+DLG +A AE GID RV+YL+RSAK+++I+ TVHRKF+ + + + T + +++YMR+LFT I V+ SFL + +FVVCHD+D LGD QAS IA ++P E+ LV+S L T K S + +P FE A VV RLQR+LD FE LYC Sbjct: 113 ASGNP--SDSPDVASQPSTTVSNSSTAILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASL--FGDNMNLPRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVEN----MRRLAEWAANLSSPGALEFFSIPCSYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKFHLLMGDDEETVGQERLFLKYMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPNDEI-ASLVESSLVQTAKKS-SRTDPLPFEDAYAVVLRLQRKLDAFEHLYC 406
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: D7FZI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI1_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 2.770e-21 Identity = 52/101 (51.49%), Postives = 68/101 (67.33%), Query Frame = 3 Query: 690 YMEYMRILFTVITVMQSFLAGLDSKFVVCHDFDYLGDLGQASKIARHVAPRKELERELVDSLLRDTPKPSLGKEEPFEFEHAEFVVTRLQRQLDTFEFLYC 992 ++EYMR+LFT I V+QSFL+ + +F+VCHD+D LGD QAS IA +AP E+ LV+S L T + P FE A+ VV+RLQR+LD FE LYC Sbjct: 14 FLEYMRVLFTDIAVLQSFLSEIGPEFIVCHDWDRLGDKEQASTIAHFIAPNDEIAG-LVESSLVQTARKKSSNTNPLPFEDADAVVSRLQRKLDAFEPLYC 113
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 105 bits (263), Expect = 6.470e-21 Identity = 78/248 (31.45%), Postives = 116/248 (46.77%), Query Frame = 3 Query: 162 SFSQPAGGVLVKTTFSSTFRLVFLVGLEGSGHHYLTPAVNHIRPTGDDDHDYCNELKLMYKRLGIKQSMTKSPSHYRERIEDARGYMQTLAQYAS-SLRSKEA-----GAMLCDKN---SYPRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRKFYENLTEQDSTSKGYMEYMRILFTVITVMQSFLAGLDSKFVVCHDFDYLGDLGQASKIARHVAPRKELERELVDSLL 878 SF P V+ K SS R+VFLVGLEG+GHHY+ + + D C +L +M K L + S+ KS + Y + + R M+ LA + SL E+ GA SYP +G EK Y+D +A AE G+D+R +YL RSA ++ S + H + ++ RIL + V+ S LD F C + + D QA+++A +AP +L D +L Sbjct: 92 SFRYPV--VVEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKK---DKVRCPKLCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNY----------GGSFIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPNNHTAEKLADQIL 324
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 100 bits (250), Expect = 5.040e-19 Identity = 78/264 (29.55%), Postives = 121/264 (45.83%), Query Frame = 3 Query: 162 SFSQPAGGVLVKTTFSSTFRLVFLVGLEGSGHHYLTPAVNHIRPTGDDD-HDYCNELKLMYKRLGI---KQSMTKSPSHYRERIEDARGY--------MQTLAQYASSLRSKEAGAMLCDKNSYPRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRKFYENLTEQDSTSKGYMEYMRILFTVITVMQSFLAGLDSKFVVCHDFDYLGDLGQASKIARHVAPRKELERELVDSLLRD------TPKPS 899 SF PA V+ K T SS R++FLVGLEG+GHHY + T + C K +Y L KQ ++ R +E+ Y +AQ+ + RSK +G M S+P +G +K Y+D LA AE G+D+R +YL RSA+ +++S T H + +M R L V++S L F C ++ + D Q ++AR +AP ++ + L +L + +P+PS Sbjct: 51 SFEYPA--VVEKKTVSSQLRVMFLVGLEGTGHHYFLNVFDDACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQAAIAQFVTC-RSK-SGMM-----SFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHY----------GGTFMRESRALINNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPDEDTAQRLEGKMLENVKPGSASPRPS 295
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 6.850e-14 Identity = 71/249 (28.51%), Postives = 109/249 (43.78%), Query Frame = 3 Query: 318 CNELKLMYKRLGIKQSMTKSPSHYRERIEDARGYMQTLAQYAS-SLRSKEA-----GAMLCDKN---SYPRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRKFYENLTEQDSTSKGYMEYMRILFTVITVMQSFLAGLDSKFVVCHDFDYLGDLGQASKIARHVAPRKELERELVDSLLRDTP---KPSLGKEEPF-----EFEHAE-------FVVTRLQRQLDTFEFLYC 992 C +L +M K L + S+ +S + Y + + R M+ LA + SL E+ GA SYP +G EK Y+D +A AE G+D+R +YL RSA ++ S +VH + ++ RIL + V+ S LD F C + + D QA+++A +AP +L D +L P G ++ + H E VVTRLQ++LD E C Sbjct: 16 CPKLCVMAKVLYPELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNY----------GGSFIRESRILLNNLAVVHSTFQELDPAFTTCFRYGEMADPAQAARVAGFLAPNNRTAEKLADQMLSHVKIKSPPESGNKQSWGEGGKRLRHPEDVDPPKAAVVTRLQQRLDMVEKDVC 254
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: D7G1E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 3.550e-13 Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = 3 Query: 354 IKQSMTKSPSHYRERIEDARGYMQTLAQYASSLRSKEAGAMLCDKNSYPRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRKFYENLTEQDSTSK 686 I +M S + + + R M+ LAQ A +L + ++ SYP +G +KV Y+DL LA AE EG+DLRV+Y+KRSAK+++++ TVHR F L + DS+++ Sbjct: 23 ISTTMRTSSTAFTASWQQGRDQMRDLAQRAQTLPTPGTVQLITGGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGFQNFLGDIDSSAE 133
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: A0A7S0A0K6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO) HSP 1 Score: 76.6 bits (187), Expect = 3.250e-11 Identity = 70/245 (28.57%), Postives = 104/245 (42.45%), Query Frame = 3 Query: 123 LNSSLEVHGAHQQSFSQPAGGVLVKTTFSSTFRLVFLVGLEGSGHHYLTPAVNHI----RPTGDDDHD------------YCNELKLMYKRLGIKQSMTKSPSHYRERIEDARGYMQTLAQYASSLRSKEAGAML-----CDKNSYPRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRKFYENLTEQDSTSKGYMEYMRILFTVITVMQSFLAGLDSKFVVCHDFDYL 794 L S+ A ++ +++P +L K + +RL+F+ GLEGSGHH P + R D + + E KL R K + + A G ++T + S R +L C SYP G K+F D+ LA LAEDEG+D R++ L R A ++ STT+HR F TE T++ +QS LD FV+C ++D L Sbjct: 80 LYSANATRAALERQWARP---LLPKRVHGARWRLLFVAGLEGSGHHLWIPLLKRCVKARRCAADVELGRRLWTDRTRKGLWSFETKLYAPRAAKKWEYAPPGAKWLSGFRRAEGEVRTALRRLS--RRNATSPLLASLGGCGMMSYPNFPGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPAAAVLRSTTIHRHFGSWNTEAVVLEHNAQ-------TLLAQLQS----LDPAFVLCTEYDRL 308
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: A0A7S3PJR3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJR3_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.760e-7 Identity = 60/219 (27.40%), Postives = 93/219 (42.47%), Query Frame = 3 Query: 186 VLVKTTFSSTFRLVFLVGLEGSGHHYLTPAVNHIRPTGDDD-----HDYCNELKLMYKRLGIKQSMT--KSPSHYRERI-----------EDARGYMQTLAQYASSLRSKEAGAMLCDKNSYPRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRKFYENLTEQDSTSKGYMEYMRILFTVITVMQSFLAGLDSKFVVCHDFD 788 +L K FS R VF++GLEG+GHH P + + D D+ M R G+ + T + Y ER+ + ARG Q++ ++L K SYP + +S D+ +A + E GID RV+ + R A +++STTVHR F + T Y + ++ S LA LD F C +++ Sbjct: 9 ILPKRAFSDQLRFVFVMGLEGTGHHMWLPIWTDCQNKSNCDCAPQIEDFTFGADQM--RSGMFGAFTGKREVEQYVERVISQLPSKLAEDQKARGSDQSVTYLLNTLCVKHKHYWSVGAMSYPNFMNGCRSWSNPDVRLMAEVFESLGIDFRVMVVVRDALDVLLSTTVHRHF----GRFEPTGHTYASIVNS-----AMVDSQLARLDPTFFKCLEYE 216
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: A0A7S2GH68_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GH68_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.080e-7 Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 492 SYPRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRKFYENLTEQDSTSKGYMEYMRILFTVITVMQSFLAGLDSKFVVCHDFDYLGDLG-QASKIARHVAP 839 SYP G +K ++ LA LAE+ G+DLR++ L+R A ++++STT HRKF TE M +L + + L +D +F +C D+ +G+ SKI + + P Sbjct: 33 SYPNFGGYDKALHRPNIHQLAMLAEEAGVDLRILVLQRPAHELMVSTTKHRKFNSKPTE-----------MAVLGDNAAGLAAQLQLIDPRFFLCVDYSSMGNRSIWMSKIGQQIHP 138
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: A0A7S3LMY4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LMY4_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 3.120e-7 Identity = 65/238 (27.31%), Postives = 100/238 (42.02%), Query Frame = 3 Query: 186 VLVKTTFSSTFRLVFLVGLEGSGHHYLTPAVNHIRPT--------GDDDHD--YCNELKLMYKRLGIKQS--------------MTKSPSHYRERIEDARGYMQTLAQYASSLRSK-EAGAMLCDKN-------SYPRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRKFYENLTEQDSTSKGYMEYMRILFTVITVMQSFLAGLDSKFVVCHDFDYLGDL 803 VL K +S R VF++G+EG+GHH + PT G+ DH + K Y G K+ + KS Y + E T + +S + + E G ++ SYP G + + D+ LA + E +G+D RV+ L R A ++IS VHRK+ + S +Y+ IL +++S L LD F C D+D L D+ Sbjct: 145 VLKKQAYSDKTRFVFILGIEGTGHHMFHSVLREC-PTCTCPVGINGNADHGGFAVSSYKHDYGVFGSKEGKDGVKKHVNMFTDGLLKSLEEYYKDDEGRFKATDTTTFFINSYKDEGETGRCTLWQDWSSYSEISYPNFGGRCRRWQIPDVRILAEMFESQGVDFRVVVLVRDALDLLISNAVHRKW-------ERWSVIAPQYISILND--NILKSQLLRLDPNFFRCIDYDNLPDI 372 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1024.316.1 >prot_F-serratus_M_contig1024.316.1 ID=prot_F-serratus_M_contig1024.316.1|Name=mRNA_F-serratus_M_contig1024.316.1|organism=Fucus serratus male|type=polypeptide|length=318bp MKMLRGMFGLFSLAATWRAAQCNPRLNSSLEVHGAHQQSFSQPAGGVLVKback to top mRNA from alignment at F-serratus_M_contig1024:7588..10529+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1024.316.1 ID=mRNA_F-serratus_M_contig1024.316.1|Name=mRNA_F-serratus_M_contig1024.316.1|organism=Fucus serratus male|type=mRNA|length=2942bp|location=Sequence derived from alignment at F-serratus_M_contig1024:7588..10529+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1024:7588..10529+ >mRNA_F-serratus_M_contig1024.316.1 ID=mRNA_F-serratus_M_contig1024.316.1|Name=mRNA_F-serratus_M_contig1024.316.1|organism=Fucus serratus male|type=CDS|length=1908bp|location=Sequence derived from alignment at F-serratus_M_contig1024:7588..10529+ (Fucus serratus male)back to top |