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Homology
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: A0A7S3PR25_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR25_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.380e-6 Identity = 61/214 (28.50%), Postives = 88/214 (41.12%), Query Frame = 3
Query: 189 LVKTTFSSTFRLVFLVGLEGSGHHYLTPAVNHIRPTGDDDHDYCNELKLMYKRLGIKQSMTKSPSHYRERIEDA--RGYMQTLAQYASSLRSKEAGAMLCDK------------NSYPRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRKFYENLTEQDSTSKGYMEYMRILFTVITVMQSFLAGLDSKFVVCHDFD 788
L KT FS RLVF VGLEG+GHH V + + + +M+ G + ++ GY S G + + SYP G+EK + D+ LA LAE GID RV+ L+R A++++IS HR F N+ K Y E R+L + + +A +D KF C +D
Sbjct: 412 LKKTVFSK-LRLVFFVGLEGTGHHLWQGIVMKLLKNKQLNAECKLNDLIMHPAGGCWAPWNNGKGFFCSAASESFKTGYEMAADAMMKLKASNATGTHMLNLVYRGWKGNCGSIASYPCFGGSEKNLQHPDVLKLAELAESIGIDFRVVLLQRKAEELVISDIWHRHF--NIGHP----KMYEE--RVLENNAASIYTTIATMDPKFYSCTQYD 616
BLAST of mRNA_F-serratus_M_contig1024.316.1 vs. uniprot
Match: A0A7S2DFF0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFF0_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 1.320e-5 Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 3
Query: 492 SYPRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRKFYENLTE 668
SYP G +K ++ LA LAE+ G+DLR++ L+R A ++++STT HRKF TE
Sbjct: 33 SYPNFGGYDKALHRPNIHQLAMLAEEAGVDLRILVLQRPAHELMVSTTKHRKFNSKPTE 91
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 69.7 |
Seed ortholog evalue | 2.8e-09 |
Seed eggNOG ortholog | 44056.XP_009035729.1 |
KEGG ko | ko:K10147,ko:K17506 |
KEGG Pathway | ko04115,map04115 |
Hectar predicted targeting category | signal peptide |
EggNOG free text desc. | protein serine/threonine phosphatase activity |
EggNOG OGs | COG0631@1,KOG0698@2759 |
EC | 3.1.3.16 |
COG Functional cat. | T |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko01009 |
Exons | 2 |
Model size | 2099 |
Cds size | 954 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928829.723307-UTR-F-serratus_M_contig1024:7587..7634 | 1622928829.723307-UTR-F-serratus_M_contig1024:7587..7634 | Fucus serratus male | UTR | F-serratus_M_contig1024 7588..7634 + |
1690962591.8537052-UTR-F-serratus_M_contig1024:7587..7634 | 1690962591.8537052-UTR-F-serratus_M_contig1024:7587..7634 | Fucus serratus male | UTR | F-serratus_M_contig1024 7588..7634 + |
1622928829.7808802-UTR-F-serratus_M_contig1024:9431..10529 | 1622928829.7808802-UTR-F-serratus_M_contig1024:9431..10529 | Fucus serratus male | UTR | F-serratus_M_contig1024 9432..10529 + |
1690962591.885935-UTR-F-serratus_M_contig1024:9431..10529 | 1690962591.885935-UTR-F-serratus_M_contig1024:9431..10529 | Fucus serratus male | UTR | F-serratus_M_contig1024 9432..10529 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928829.7346115-CDS-F-serratus_M_contig1024:7634..8242 | 1622928829.7346115-CDS-F-serratus_M_contig1024:7634..8242 | Fucus serratus male | CDS | F-serratus_M_contig1024 7635..8242 + |
1690962591.8676171-CDS-F-serratus_M_contig1024:7634..8242 | 1690962591.8676171-CDS-F-serratus_M_contig1024:7634..8242 | Fucus serratus male | CDS | F-serratus_M_contig1024 7635..8242 + |
1622928829.7474875-CDS-F-serratus_M_contig1024:9085..9431 | 1622928829.7474875-CDS-F-serratus_M_contig1024:9085..9431 | Fucus serratus male | CDS | F-serratus_M_contig1024 9086..9431 + |
1690962591.8768332-CDS-F-serratus_M_contig1024:9085..9431 | 1690962591.8768332-CDS-F-serratus_M_contig1024:9085..9431 | Fucus serratus male | CDS | F-serratus_M_contig1024 9086..9431 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1024.316.1 >prot_F-serratus_M_contig1024.316.1 ID=prot_F-serratus_M_contig1024.316.1|Name=mRNA_F-serratus_M_contig1024.316.1|organism=Fucus serratus male|type=polypeptide|length=318bp
MKMLRGMFGLFSLAATWRAAQCNPRLNSSLEVHGAHQQSFSQPAGGVLVK TTFSSTFRLVFLVGLEGSGHHYLTPAVNHIRPTGDDDHDYCNELKLMYKR LGIKQSMTKSPSHYRERIEDARGYMQTLAQYASSLRSKEAGAMLCDKNSY PRLSGAEKVFSYIDLGTLANLAEDEGIDLRVIYLKRSAKQMIISTTVHRK FYENLTEQDSTSKGYMEYMRILFTVITVMQSFLAGLDSKFVVCHDFDYLG DLGQASKIARHVAPRKELERELVDSLLRDTPKPSLGKEEPFEFEHAEFVV TRLQRQLDTFEFLYCRH* back to topmRNA from alignment at F-serratus_M_contig1024:7588..10529+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1024.316.1 ID=mRNA_F-serratus_M_contig1024.316.1|Name=mRNA_F-serratus_M_contig1024.316.1|organism=Fucus serratus male|type=mRNA|length=2942bp|location=Sequence derived from alignment at F-serratus_M_contig1024:7588..10529+ (Fucus serratus male) AGCGGTGAAGTGGAAGACCTGACCTTTCAAGGAGCCGAGCTTGGAAGATG
AAAATGCTCAGGGGTATGTTCGGGCTGTTTTCCCTGGCGGCGACTTGGAG
AGCCGCGCAATGCAATCCCAGGCTCAATAGCTCCTTGGAAGTGCACGGGG
CACACCAACAGTCATTTTCGCAGCCCGCTGGTGGCGTTCTTGTCAAGACC
ACCTTCAGCTCAACGTTTAGGCTTGTGTTCTTGGTGGGCCTAGAGGGAAG
CGGTCATCATTACCTCACTCCCGCTGTCAACCACATCAGGCCGACTGGAG
ATGATGATCACGATTACTGCAACGAACTTAAACTCATGTACAAAAGATTG
GGCATAAAGCAATCAATGACGAAGTCTCCGTCTCACTATCGGGAGCGTAT
CGAAGATGCAAGGGGGTACATGCAGACACTGGCACAGTACGCATCAAGTC
TACGATCGAAGGAAGCCGGGGCAATGCTTTGCGACAAGAACTCGTATCCT
AGACTATCAGGTGCTGAAAAAGTTTTCAGTTACATCGATTTGGGGACACT
GGCGAACCTCGCCGAGGACGAAGGCATCGATCTACGCGTGATTTATCTCA
AGCGATCAGCAAAGCAAATGATCATCTCAACAACCGTGCATCGCAAATTT
TACGAGTGAGTCAGCATTTTACATAAGAACGATTGGGGGTAATCTCATAG
ACCTAAACGCGTTGCTCAAGCCTTCGTCGAAATGTTTTTTAAGTCGTTCA
GGCGTATCATTGGTACAAGCGACTTGATTTCTTCGATGGCAATATGCCGC
AAAATGGTGTTCCAGAACTGAGTCAACTACCGATTACTCCGTTCAACTCG
CGGTGCAACGATGACATTGTTGGTGGCATTCAGGTTATCAGCAATTCTAA
AACCTACAATATTTTGTGTAATATATGCAATGCACTTTTTTGTCACTAAT
AATGTATCCCGCCTGTTTTCGCGGAAGAAGGCCTCTGGTCGATGCTTGAA
CTAAGATGTCAATGGCACTAACAGCAAGCTTCCGTTTGGGTATGTGTACA
AGTTGGGATACTCAAATTAAGCTGAACTTGGAATCTCAGATACAGATGTT
ATAATAACCGTTCACGAAGAAGCTGGACCATATGACTAGCTGGCGTTATG
TCAGTCACCTAGTCTAGAGGTAAAATATTTACAAATTATTTCAATTTTAT
CGTCAGTGAGCCCCAGTGAATGCACGTGTCATGTAAAGTAATTCACACCA
TGCATGCATGTAGCTCTAAGCGTTTGGTCGACGGCATGATCACTGTGTCC
TCTAGACTCTCGACGATTCGGGACCTTAACTCCTATTTGCTACCAGGCAG
GTATTTTCAAGGTTTACTGACTGTAGCTTTAGAGCTACAGTAGCTATGTT
TCCTGTCGAACATCGTAGAAATATAAGTTGTCAATCCCTACGTCTCTCTG
ACCCTGTATACCGGTCGCAAATTCTCGCAACCTCTATCGCCACGCAAGGA
ATTTGACCGAACAGGACAGTACATCTAAGGGCTACATGGAATACATGCGG
ATTTTGTTCACCGTCATCACAGTGATGCAGTCCTTCCTCGCCGGGCTGGA
TTCCAAGTTTGTGGTGTGTCACGACTTCGACTACCTTGGCGACTTGGGTC
AGGCTTCGAAGATCGCGCGACATGTGGCTCCCAGGAAGGAGCTAGAAAGG
GAGCTCGTTGATTCATTATTGAGGGATACACCGAAGCCTTCCTTGGGAAA
AGAAGAACCTTTTGAATTCGAACACGCCGAGTTCGTAGTCACGCGTTTGC
AACGTCAGTTGGACACTTTCGAGTTTCTGTACTGCCGACATTAGTCTGTG
CCGAGGTCACAGAGAGCGTGTTGATCATTACGTTTGCACCTGTGATTTGA
AGTCGGTGGACTCGCCATTTGTAAGTTATTTGTTGGAGGGGAACCGAGGC
AGTGAGTTGCTGGTCCTTCCCGCCTGGTTAATGTATACCCGATCGATCGA
GTCAAATGTAGATCTACAGGTTATTTTTGCAAAAATGTCGAATGGAGGAA
CGGGGTATTATGTAATGATTTTATGTTATTAATGTTAAAAGTAATCAGTG
AATATCACCTGATATTTGTTCAAACATTTTCACACTTTCGTTCGTGTCTA
GGTTTTCGATGTCAGGAGACCGGGTTCGAACTCTCCCCCACAAGCATTAG
GAGAGGGTGATTTGCCAATAGAAATAACGTATCTGCCTACTAATAGATTG
ATGCTACAAGTTTTTCTTGTTGATAATCAACGGGTTTTCGAGGTACCGGT
GATGCCGCCGCGATGCGTTAACATAGAGAGTACAGCGCCATTTCTGAGGC
GTACAAGAAGGGAGTTGAGACGGAGAGACTACCTCATTGCTCGACTGAAA
CAGCCCCACCGCAGTGACCGAGTGAGACTTCCTGGGATAAGCTCGGCCGA
GATCACGAGTCCTAAGGTTATTCATGCATTGTCCAACGTCCGGGTCGCTA
CTACCCCGCCGGAAGAGGCAGCCTCCGCGCCCCGACCTCTGGGTTGTAAC
TGAAACGGACGCTTAGCTTACCAAACTCATGATGATGTTGTGCTTGTCGA
AGGCCAATGCAAGTGCCATCCCTGCATGCCGCTGATAACGAGTCCCCAAG
GTTTAGTACAATCTCGGTGTCTGCTGTCCGAGGCCTCTGCAATAATTGTT
GTCGTCTGTTCGAGTAGCGCTTCCACAGTATCTACTACGTGGGAGTTGAT
ATCATTATCTATGCGTTACTCACAGGGGGACGGAGTGAATACCCCCCTGT
CCAGCCGCAGGCTTTGTCCGCAGGTCTTCCTTCCTTTTCATATATTATAC
TTATCTTGTCTCTGTGTGTGAGTATGGATACTATTAATAGGGTATGCTGT
ATTCCGGAGCACGCTAAGCGAGCGCCGTGAACTATAACGAAG back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1024:7588..10529+ >mRNA_F-serratus_M_contig1024.316.1 ID=mRNA_F-serratus_M_contig1024.316.1|Name=mRNA_F-serratus_M_contig1024.316.1|organism=Fucus serratus male|type=CDS|length=1908bp|location=Sequence derived from alignment at F-serratus_M_contig1024:7588..10529+ (Fucus serratus male) ATGAAAATGCTCAGGGGTATGTTCGGGCTGTTTTCCCTGGCGGCGACTTG GAGAGCCGCGCAATGCAATCCCAGGCTCAATAGCTCCTTGGAAGTGCACG GGGCACACCAACAGTCATTTTCGCAGCCCGCTGGTGGCGTTCTTGTCAAG ACCACCTTCAGCTCAACGTTTAGGCTTGTGTTCTTGGTGGGCCTAGAGGG AAGCGGTCATCATTACCTCACTCCCGCTGTCAACCACATCAGGCCGACTG GAGATGATGATCACGATTACTGCAACGAACTTAAACTCATGTACAAAAGA TTGGGCATAAAGCAATCAATGACGAAGTCTCCGTCTCACTATCGGGAGCG TATCGAAGATGCAAGGGGGTACATGCAGACACTGGCACAGTACGCATCAA GTCTACGATCGAAGGAAGCCGGGGCAATGCTTTGCGACAAGAACTCGTAT CCTAGACTATCAGGTGCTGAAAAAGTTTTCAGTTACATCGATTTGGGGAC ACTGGCGAACCTCGCCGAGGACGAAGGCATCGATCTACGCGTGATTTATC TCAAGCGATCAGCAAAGCAAATGATCATCTCAACAACCGTGCATCGCAAA TTTTACGAATGAAAATGCTCAGGGGTATGTTCGGGCTGTTTTCCCTGGCG GCGACTTGGAGAGCCGCGCAATGCAATCCCAGGCTCAATAGCTCCTTGGA AGTGCACGGGGCACACCAACAGTCATTTTCGCAGCCCGCTGGTGGCGTTC TTGTCAAGACCACCTTCAGCTCAACGTTTAGGCTTGTGTTCTTGGTGGGC CTAGAGGGAAGCGGTCATCATTACCTCACTCCCGCTGTCAACCACATCAG GCCGACTGGAGATGATGATCACGATTACTGCAACGAACTTAAACTCATGT ACAAAAGATTGGGCATAAAGCAATCAATGACGAAGTCTCCGTCTCACTAT CGGGAGCGTATCGAAGATGCAAGGGGGTACATGCAGACACTGGCACAGTA CGCATCAAGTCTACGATCGAAGGAAGCCGGGGCAATGCTTTGCGACAAGA ACTCGTATCCTAGACTATCAGGTGCTGAAAAAGTTTTCAGTTACATCGAT TTGGGGACACTGGCGAACCTCGCCGAGGACGAAGGCATCGATCTACGCGT GATTTATCTCAAGCGATCAGCAAAGCAAATGATCATCTCAACAACCGTGC ATCGCAAATTTTACGAGAATTTGACCGAACAGGACAGTACATCTAAGGGC TACATGGAATACATGCGGATTTTGTTCACCGTCATCACAGTGATGCAGTC CTTCCTCGCCGGGCTGGATTCCAAGTTTGTGGTGTGTCACGACTTCGACT ACCTTGGCGACTTGGGTCAGGCTTCGAAGATCGCGCGACATGTGGCTCCC AGGAAGGAGCTAGAAAGGGAGCTCGTTGATTCATTATTGAGGGATACACC GAAGCCTTCCTTGGGAAAAGAAGAACCTTTTGAATTCGAACACGCCGAGT TCGTAGTCACGCGTTTGCAACGTCAGTTGGACACTTTCGAGTTTCTGTAC TGCCGACATTAGGAATTTGACCGAACAGGACAGTACATCTAAGGGCTACA TGGAATACATGCGGATTTTGTTCACCGTCATCACAGTGATGCAGTCCTTC CTCGCCGGGCTGGATTCCAAGTTTGTGGTGTGTCACGACTTCGACTACCT TGGCGACTTGGGTCAGGCTTCGAAGATCGCGCGACATGTGGCTCCCAGGA AGGAGCTAGAAAGGGAGCTCGTTGATTCATTATTGAGGGATACACCGAAG CCTTCCTTGGGAAAAGAAGAACCTTTTGAATTCGAACACGCCGAGTTCGT AGTCACGCGTTTGCAACGTCAGTTGGACACTTTCGAGTTTCTGTACTGCC GACATTAG back to top
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