mRNA_F-serratus_M_contig1022.309.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1022.309.1 vs. uniprot
Match: D7FIJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ8_ECTSI) HSP 1 Score: 705 bits (1819), Expect = 2.040e-240 Identity = 447/749 (59.68%), Postives = 527/749 (70.36%), Query Frame = 1 Query: 163 PRSYSTERWKAPPLFRPIRIPSDHPKHSDAVSLNELIAGDYTEVLLTTYLLSGKFLLDMLPRLKTVPLLIVQGLKDKSPAVANLRTFMATHNPRAVVYTPKTIHIGLHHSKMILLKYRTGVRVVIMTCNMRMDCWAGRCQAAWYQDFPFKT----------ATGACSIERKREGXXXXXXXXXXXXXXXXSAWDAWEFEGEEEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDNEVIVTSEFEITLIDYFDRVGGPAATFGRSLEAYDFSSANVVLIPSVPGRHSGKNLYRYGHMRVRDVLRKEVVHVRPGNHRVLFQVASIMNLSKKPYKWLGEITESFMAEKATP-----GQVAEADRPSTPKESEEXXXXXXXXXXXXXXXXTPRKPLGQPRSSLDNKNIYQLRMEKRERKEMFRQRNVLGILPRKEPKPKRPGKRALKRKRLEERRIAERESKIV-YVGKERKREWYSKFLRILWPSEESIRLSNLGWESGMGMPCLTTTVFEGGFRKSGDNFYLNRVMTELKPLLSRWTGAVGMNRDDAMPHLNTYCRYRELKRSDGTLKISKDGMAYFLLGSHSLHRMSWGYLEHRKPGQQMKKPRLRFKPLDPLKPDTVKPYAEEIVQLDVKSFDMGIMFLPSRLPPKKWTPRTAAAXXXXXXXXXXXXXXXXXXXXXXRPFSCDPEGDLYRLRPLSYCVPDEAPTDRLRTLPLGLLPIPYQLPREYVG 2361 P+SY +ERW PPLFRP+RIPSD ++D VSL EL+ G+YTE L+ +YL+ +FLL+ PRLKTVP L++QG+K+ P V +++ F+ +P AVVY PKTIHIGLHHSKMILLKY+TGVRVVIMTCNMR D W GRCQAAWYQDFPFK A G +RKR G XXXXX E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V++TSEFE LIDYF+ VGGPAA +GRSL AYDFSSANV LIPSVPGRH G++LYRYGHMRVR VL +E VHVRPG+HRV FQ ASIMNLS++PYKWLGEITESFMAEK + G+ A D E EE X P+KPLGQ + +K I + R E+ ER+E +RNVLGILP K+ + ++ +VGKERKR W+ KFLR++WP+EE++R SNLGWESG GMPCLTTT++EGG+RK N+ LNRVM ELKPLL WTGA GM+R +AMPHLNTY RYREL R+DG+LK+SKDG+AYFLL SHSLHR++WGYLEHR P Q+ +K R+R KP+ P KP+ PY EE QLD+KSFDMG+MFLPS++PPK+ P XXXXXXXXXXXXXXXXXXXXX PFSCDPEG L+RLRPLSY PD+AP RL+TLPLGLLP+P+QLP VG Sbjct: 167 PKSYDSERWSCPPLFRPVRIPSDPASNADGVSLGELLGGEYTEALVASYLVDAEFLLNAAPRLKTVPFLLIQGIKEDKPLVVSMKAFLKREHPAAVVYLPKTIHIGLHHSKMILLKYKTGVRVVIMTCNMRPDDWGGRCQAAWYQDFPFKPPRAKSKGKEKARGKAG-KRKRVGADAAPILDEEPXXXXXXXXXXXXXXXXGESGVAAADDAGGAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------VVITSEFEEILIDYFEHVGGPAAVWGRSLSAYDFSSANVTLIPSVPGRHKGRDLYRYGHMRVRAVLAREEVHVRPGSHRVAFQAASIMNLSRRPYKWLGEITESFMAEKTSSKDGKNGKKAIRDIDVGLAEEEEMRRKKXEQDERNKGKNQPKKPLGQRKDPWGDKGILEKRKERAERREAIHRRNVLGILPPKKXXXXXXXXXXXXXXXXXXXXXXXXXAALIKWVGKERKRNWFMKFLRVVWPTEEAVRTSNLGWESGAGMPCLTTTLYEGGYRKCETNYQLNRVMEELKPLLCTWTGAKGMDRGNAMPHLNTYYRYRELPRTDGSLKMSKDGLAYFLLASHSLHRIAWGYLEHRNPPQRPRKRRVRMKPIYPPKPENTLPYKEEEAQLDIKSFDMGVMFLPSKIPPKRPLPMDXXXXXXXXXXXXXXXXXXXXXXXXPAPFSCDPEGALFRLRPLSYRCPDQAPAARLKTLPLGLLPLPHQLPGRSVG 907
BLAST of mRNA_F-serratus_M_contig1022.309.1 vs. uniprot
Match: A0A6H5KBB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB1_9PHAE) HSP 1 Score: 164 bits (414), Expect = 8.270e-42 Identity = 159/308 (51.62%), Postives = 171/308 (55.52%), Query Frame = 1 Query: 496 MILLKYRTGVRVVIMTCNMRMDCWAGRCQAAWYQDFPFKTATGACSIERKREGXXXXXXXXXXXXXXXXSAWDAWEFEGEEEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDNE-----------VIVTSEFEI---TLIDYFDRVGGPAATFGRSLEAYDFSSANVVLIPSVPGRHSGKNLYRYGHMRVRDVLRKEVVHVRPGNHRVLFQVASIMNLSKKPYKWLGEITESFMAEKA-----TPGQVAEADRPSTPKESEEXXXXXXXXXXXXXXXXTPRKPLG 1362 MILLKY+TGVRVVIMTCNMR D W GRCQAAWYQ FPFK + K G DA EE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D E V++TSEFE+ LIDYF+ VGGPAA +GRSL AYDFSSAN LIPSVPGRH GK+LYR V FQ AS+MNLS +PYKWLGEITESFMAEK G+ A D E EE P+KPLG Sbjct: 1 MILLKYKTGVRVVIMTCNMRPDDWGGRCQAAWYQGFPFKPPRAKSKGKEKARGKAGTRKRVGA---------DAAPILDEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRVASDSEEDYPKEGXXXXXXXHDDVVITSEFEVGEEILIDYFEHVGGPAAVWGRSLFAYDFSSANATLIPSVPGRHKGKDLYR-----------------------VAFQAASVMNLSLRPYKWLGEITESFMAEKTGGKNGKDGKKAIRDIDVGLAEEEEVRMKTKEQDERNKGKNKPKKPLG 276
BLAST of mRNA_F-serratus_M_contig1022.309.1 vs. uniprot
Match: D8LE95_ECTSI (Tyrosyl-DNA phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE95_ECTSI) HSP 1 Score: 156 bits (395), Expect = 1.670e-36 Identity = 139/495 (28.08%), Postives = 206/495 (41.62%), Query Frame = 1 Query: 925 FEITLIDYFDRVGGPAATFGRSLEAYDFSSANVVLIPSVPGR-----------HSGKNLYRYGHMRVRDVLRKEV-----VHVRPGNHRVLFQVASIMNLSKKPYKWLGEITESFMAEKATPGQVAEADRPSTPKESEEXXXXXXXXXXXXXXXXTPRKPLGQPRSSLDNKNIYQLRMEKRERKEMFRQRNVLGILPRKEPKPKRPGKRALKRKRLEERRIAERESKIVYVGKERKREWYSKFLRILWPSEESIRLSNLGWESGMGMPCLTTTVFEGGFR-KSGDNFYLNRVMTELKPLLSRWTGAVGMNRDDAMPHLNTYCRYRELKRSDGT-LKISKDGMAYFLLGSHSLHRMSWGYLEHRKPGQQMKKPRLRFKPLDPLKPDTVKPYAEEIVQLDVKSFDMGIMFLPS--RLPPKKWTPRTAAAXXXXXXXXXXXXXXXXXXXXXXRPFSCDP-EGDLYRLRPLSYCVPDEAPTDRLRTLPLGLLPIPYQLP 2346 F+ L+ + +VGGPA+ F +L YDF A V L+PSVPG H G++L++YGHMRVR +L +E ++ G H+VL Q++S+ +L+K P +WL EI SFM P E E GK+A +R ++E E++ + + LR++WPS E++R S+ GW +G + C T ++ G ++ + DN+ N + EL+PLL +W G +NR PH+ +Y RYRE+ +GT ++ D +A+FLL S +L R +WGYL + L ++SF+MG+MFLPS R P + AAA F+C P E L + PLS EA + LPL LLP+PY LP Sbjct: 224 FQEDLMGFLFKVGGPASAFASTLGEYDFRGARVALVPSVPGTGGNTPGTGGKPHKGRDLHKYGHMRVRALLAREKEDGTGAKLKEGGHKVLCQISSLASLTKTPNRWLSEILASFM-----------------PLEDE--------------------------------------------------------------------GKKAEPTRRS----VSEDEAQATLL---------EQHLRVVWPSVEAVRTSSQGWIAGGSICCNTVNMYGGKYKWPNMDNYRSNTPLPELRPLLRKWKGNPAVNRTRDAPHIKSYLRYREVAGENGTETRVDGDEVAWFLLTSSNLSRSAWGYLN------------------------------KASTDLTLRSFEMGVMFLPSLLRSPSQDSDDGNAAAKASG--------------------FTCTPGEMGLTQRFPLSLGYDCEAG----KGLPLSLLPLPYVLP 566
BLAST of mRNA_F-serratus_M_contig1022.309.1 vs. uniprot
Match: A0A6H5KBK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBK0_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 1.650e-17 Identity = 64/89 (71.91%), Postives = 74/89 (83.15%), Query Frame = 1 Query: 2080 MGIMFLPSRLPPKKWTPRTAAAXXXXXXXXXXXXXXXXXXXXXXRPFSCDPEGDLYRLRPLSYCVPDEAPTDRLRTLPLGLLPIPYQLP 2346 MG+MFLPS++PPK+ P + XXXXXXXXXXXXXXXXXXX PFSCDPEG L+RLRPLSY PD+AP RL+TLPLGLLP+P+QLP Sbjct: 1 MGVMFLPSKIPPKRPPPMDYDSEXXXXXXXXXXXXXXXXXXXSPAPFSCDPEGALFRLRPLSYRCPDQAPAARLKTLPLGLLPLPHQLP 89
BLAST of mRNA_F-serratus_M_contig1022.309.1 vs. uniprot
Match: A0A2D4BMS2_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS2_PYTIN) HSP 1 Score: 97.1 bits (240), Expect = 6.950e-17 Identity = 103/387 (26.61%), Postives = 151/387 (39.02%), Query Frame = 1 Query: 250 AVSLNELIAGDYTEVLLTTYLLSGKFLLDMLPRLKTVPLLIVQGLKDKSPAVANLRTFMATHNPRAVVYTPKT-IHIGLHHSKMILLKYRTGVRVVIMTCNMRMDCWAGRCQAAWYQDFPFKT-ATGACSIERKRE--------GXXXXXXXXXXXXXXXXSAWD-AWEFE--------------GEEEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------DDDNE-------------VIVTSEFEITLIDYFDRVGGPAATFGRSLEAYDFSSANVVLIPSVPGRHSGKNLYRYGHMRVRDVLRKEVVHVRPGNHRVLFQVASIMNLSKKPYKWL-GEITESFM 1224 AV L++L++G+++ VLLT Y+ +L + PRL VP+++V G +D+ + R F N AV P+ I G HH+KM+++ Y T VRV I T N W + Q W+QDF T ERKR G +D AW F GE + + +DD E V +F+ L++Y +G P F R LE +DFS+A V L+PSVPG H+G +YGH+RVR +L+ +V +H ++ Q +S+ +L +K WL GE ES M Sbjct: 505 AVGLSDLLSGEFSRVLLTNYMYDLAWLFNECPRLADVPVVLVHGERDREAMQHDCRGFT---NVTAVA--PRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIGEDDEEDERKRADLGAVYAVGLSDLLSGEFSRVLLTNYMYDLAWLFNECPRLADVPVVLVHGERDREAMQHDCRGFTNVTAVAPRLPIAYGTHHTKMMVVVYATKVRVAIFTANFIPIDWNNKTQGVWFQDFELATIGEDDEEDERKRADLGAGAGVEPVVDFKRDLVEYLSTLGAPVVAFCRELERFDFSTATVALVPSVPGYHTGAAKDKYGHLRVRRILQH--FNVPRSDHPLICQFSSLGSLDEK---WLFGEFAESLM 881
BLAST of mRNA_F-serratus_M_contig1022.309.1 vs. uniprot
Match: K3WH37_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH37_GLOUD) HSP 1 Score: 93.6 bits (231), Expect = 2.760e-16 Identity = 74/280 (26.43%), Postives = 108/280 (38.57%), Query Frame = 1 Query: 241 HSDAVSLNELIAGDYTEVLLTTYLLSGKFLLDMLPRLKTVPLLIVQGLKDKSPAVANLRTFMATHNPRAVVYTPKTIHIGLHHSKMILLKYRTGVRVVIMTCNMRMDCWAGRCQAAWYQDFPFKTATGACSIERKREGXXXXXXXXXXXXXXXXSAWDAWEFEGEEEDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDNEVIVTSEFEITLIDYFDRVGGPAATFGRS-LEAYDFSSANVVLIPSVPGRHSGKNLYRY 1077 + D V + +L+AG++T+VLLT Y+ +L PRL VP+L+V G +D+ + + T+ Y P I G HH+KM+++ Y T VRV I T N W + Q W+QDF KT ERK D N V + +FE L+ Y R+G F + L +DFS+A V L+PSVPG H+GK ++ + Sbjct: 60 NQDTVGIADLLAGEFTKVLLTNYMFDMPWLFGECPRLHDVPVLLVHGERDRLAMANECKGY--TNVSLVAPYLP--IPYGTHHTKMMVVVYPTKVRVAIFTANFIAIDWNNKTQGVWFQDFELKTLDDDDDAERKE--------------------------------------------------------------------------CASNHNADGSNSVAL--DFEADLVGYLSRLGTKVTAFCKEELVRFDFSTAKVALVPSVPGVHTGKGMHAF 259
BLAST of mRNA_F-serratus_M_contig1022.309.1 vs. uniprot
Match: A0A8K1CIS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIS9_PYTOL) HSP 1 Score: 82.8 bits (203), Expect = 8.110e-13 Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 919 SEFEITLIDYFDRVGGPAATFGRSLEAYDFSSANVVLIPSVPGRHSGKNLYRYGHMRVRDVLRKEVVHVRPGNHRVLFQVASIMNLSKKPYKWL-GEITESFM 1224 ++FE LI+Y +G P TF + L +DFS+A V LIPSVPG H+GK +++YGH+RVR +L+ V P +H ++ Q +S+ +L +K WL GE S M Sbjct: 205 ADFERDLIEYLSTLGTPVVTFCKELSRFDFSTATVALIPSVPGAHTGKAMHKYGHLRVRALLKHFAVA--PSDHPLICQFSSLGSLDEK---WLFGEFAGSLM 302
BLAST of mRNA_F-serratus_M_contig1022.309.1 vs. uniprot
Match: A0A6A4E9V0_9STRA (Tyrosyl-DNA phosphodiesterase 1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4E9V0_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 8.130e-12 Identity = 43/103 (41.75%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 919 SEFEITLIDYFDRVGGPAATFGRSLEAYDFSSANVVLIPSVPGRHSGKNLYRYGHMRVRDVLRKEVVHVRPGNHRVLFQVASIMNLSKKPYKWL-GEITESFM 1224 ++FE L+ Y +G F R L+ +DFSSA V L+PSVPG H GK++ +YGH+RVR +L+ + V P ++ ++ Q +S+ +L +K WL GE ESF+ Sbjct: 208 NDFEADLVHYLSSLGAQVKIFCRELKRFDFSSARVALVPSVPGYHKGKDMEKYGHLRVRKLLK--MYQVPPTDNPLICQFSSMGSLDEK---WLFGEFAESFL 305
BLAST of mRNA_F-serratus_M_contig1022.309.1 vs. uniprot
Match: A0A833TKC6_PHYIN (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TKC6_PHYIN) HSP 1 Score: 78.6 bits (192), Expect = 1.670e-11 Identity = 42/104 (40.38%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 916 TSEFEITLIDYFDRVGGPAATFGRSLEAYDFSSANVVLIPSVPGRHSGKNLYRYGHMRVRDVLRKEVVHVRPGNHRVLFQVASIMNLSKKPYKWL-GEITESFM 1224 +S+FE L+ Y +G P F L+ +DFSSA V L+PSVPG H GK++ +YGH+RVR +L+ + + P ++ ++ Q +S+ +L +K WL GE ES + Sbjct: 177 SSDFEADLVHYLSSLGAPVKLFCGELKRFDFSSARVALVPSVPGVHKGKDMEKYGHLRVRKLLK--MYKIPPTDNPLICQFSSLGSLDEK---WLFGEFAESLL 275
BLAST of mRNA_F-serratus_M_contig1022.309.1 vs. uniprot
Match: A0A225WPR3_9STRA (Tyrosyl-DNA phosphodiesterase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPR3_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.690e-11 Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 892 DDDNEVIV-TSEFEITLIDYFDRVGGPAATFGRSLEAYDFSSANVVLIPSVPGRHSGKNLYRYGHMRVRDVLRKEVVHVRPGNHRVLFQVASIMNLSKKPYKWL-GEITESFM 1224 D++ E + SEFE L Y +G P F L+ +DFS+A V L+P+VPG H GK++ +YGH+RVR +L+ + V P ++ ++ Q +S+ +L +K WL GE ESF+ Sbjct: 293 DEEKEAVAGASEFEADLAHYLSSLGAPVKVFCGELKRFDFSTARVALVPAVPGVHKGKDMEKYGHLRVRKLLK--MYKVPPTDNPLICQFSSLGSLDEK---WLFGEFAESFL 400 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1022.309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1022.309.1 >prot_F-serratus_M_contig1022.309.1 ID=prot_F-serratus_M_contig1022.309.1|Name=mRNA_F-serratus_M_contig1022.309.1|organism=Fucus serratus male|type=polypeptide|length=787bp LTGDGTSAEQKADSGVSQGEVLSQSIGSDWFSPSSAKRRAGPISGGGDKKback to top mRNA from alignment at F-serratus_M_contig1022:294870..312800+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1022.309.1 ID=mRNA_F-serratus_M_contig1022.309.1|Name=mRNA_F-serratus_M_contig1022.309.1|organism=Fucus serratus male|type=mRNA|length=17931bp|location=Sequence derived from alignment at F-serratus_M_contig1022:294870..312800+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1022:294870..312800+ >mRNA_F-serratus_M_contig1022.309.1 ID=mRNA_F-serratus_M_contig1022.309.1|Name=mRNA_F-serratus_M_contig1022.309.1|organism=Fucus serratus male|type=CDS|length=4722bp|location=Sequence derived from alignment at F-serratus_M_contig1022:294870..312800+ (Fucus serratus male)back to top |