mRNA_F-serratus_M_contig1022.304.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1022.304.1 vs. uniprot
Match: D7FIK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK4_ECTSI) HSP 1 Score: 110 bits (274), Expect = 3.350e-26 Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 1 Query: 1 MQEEQKRERKNKYSSMARAHANRLREVVTRLSLSLEAVDTKDKFNHIQGVGDYVHKTGGKYLSGQVSARNDKHRPPEKVFVSSAAAILVAMRREAVRRA 297 + EEQK+ RKN+ SS AR A REVV RLSLSLEAVDTKDKF+ GVG+ + K G K+L+ QV+ARN KH+P K FV+SAAAILVAM RE RRA Sbjct: 44 LMEEQKKARKNRGSSSARLTATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMIQKMGAKHLAAQVTARNPKHQPSNKTFVASAAAILVAMSREVKRRA 142
BLAST of mRNA_F-serratus_M_contig1022.304.1 vs. uniprot
Match: A0A6H5KF35_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF35_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 3.840e-17 Identity = 54/90 (60.00%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 7 EEQKRERKNKYSSMARAHANRLREVVTRLSLSLEAVDTKDKFNHIQGVGDYVHKTGGKYLSGQVSARNDKHRPPEKVFVSSAAAILVAMR 276 EEQK+ RKN+ SS AR A REVV RLSLSLEAVDTKDKF+ GVG+ V +ARN KH+P K FV+SAAAILVAMR Sbjct: 46 EEQKKARKNRGSSSARLTATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMV------------TARNPKHQPSNKTFVASAAAILVAMR 123 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1022.304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1022.304.1 >prot_F-serratus_M_contig1022.304.1 ID=prot_F-serratus_M_contig1022.304.1|Name=mRNA_F-serratus_M_contig1022.304.1|organism=Fucus serratus male|type=polypeptide|length=101bp MQEEQKRERKNKYSSMARAHANRLREVVTRLSLSLEAVDTKDKFNHIQGVback to top mRNA from alignment at F-serratus_M_contig1022:148978..150427- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1022.304.1 ID=mRNA_F-serratus_M_contig1022.304.1|Name=mRNA_F-serratus_M_contig1022.304.1|organism=Fucus serratus male|type=mRNA|length=1450bp|location=Sequence derived from alignment at F-serratus_M_contig1022:148978..150427- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1022:148978..150427- >mRNA_F-serratus_M_contig1022.304.1 ID=mRNA_F-serratus_M_contig1022.304.1|Name=mRNA_F-serratus_M_contig1022.304.1|organism=Fucus serratus male|type=CDS|length=606bp|location=Sequence derived from alignment at F-serratus_M_contig1022:148978..150427- (Fucus serratus male)back to top |