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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 2 |
Model size | 2044 |
Cds size | 1860 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928823.060824-UTR-F-serratus_M_contig1020:99008..99141 | 1622928823.060824-UTR-F-serratus_M_contig1020:99008..99141 | Fucus serratus male | UTR | F-serratus_M_contig1020 99009..99141 - |
1690962588.6988466-UTR-F-serratus_M_contig1020:99008..99141 | 1690962588.6988466-UTR-F-serratus_M_contig1020:99008..99141 | Fucus serratus male | UTR | F-serratus_M_contig1020 99009..99141 - |
1622928823.1069841-UTR-F-serratus_M_contig1020:101305..101356 | 1622928823.1069841-UTR-F-serratus_M_contig1020:101305..101356 | Fucus serratus male | UTR | F-serratus_M_contig1020 101306..101356 - |
1690962588.7316723-UTR-F-serratus_M_contig1020:101305..101356 | 1690962588.7316723-UTR-F-serratus_M_contig1020:101305..101356 | Fucus serratus male | UTR | F-serratus_M_contig1020 101306..101356 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928823.0736494-CDS-F-serratus_M_contig1020:99141..100828 | 1622928823.0736494-CDS-F-serratus_M_contig1020:99141..100828 | Fucus serratus male | CDS | F-serratus_M_contig1020 99142..100828 - |
1690962588.7088096-CDS-F-serratus_M_contig1020:99141..100828 | 1690962588.7088096-CDS-F-serratus_M_contig1020:99141..100828 | Fucus serratus male | CDS | F-serratus_M_contig1020 99142..100828 - |
1622928823.0899518-CDS-F-serratus_M_contig1020:101132..101305 | 1622928823.0899518-CDS-F-serratus_M_contig1020:101132..101305 | Fucus serratus male | CDS | F-serratus_M_contig1020 101133..101305 - |
1690962588.716818-CDS-F-serratus_M_contig1020:101132..101305 | 1690962588.716818-CDS-F-serratus_M_contig1020:101132..101305 | Fucus serratus male | CDS | F-serratus_M_contig1020 101133..101305 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1020.283.1 >prot_F-serratus_M_contig1020.283.1 ID=prot_F-serratus_M_contig1020.283.1|Name=mRNA_F-serratus_M_contig1020.283.1|organism=Fucus serratus male|type=polypeptide|length=620bp
MFRTERPKSFEPATPWKIQFKRSTTYRTHSRLLKQKHTVRDQNALLVLVS RAFTRPWRKVREIYLGVHKNIRCTREGDEEDILTIPSRRPNTYKFFSRAS LPVKKMQGLAQIQPPSSCQKLEVHAQTKRGSVLLSGSPGDGIRRKQRPST AAHGSAAPLESATVESVKKTWQDEGHGSAKHATKEGASFDENKKTWAFRN WYFSTVLPSQLIPREIAVQADEPGQSTALALALPAAPSCHRVEVARPCTA PVTKPPGRRRDRPDNDSGCRTSRGGHQRRWFSAPFMPPKRLTIISAPSFK KAESAYEYSTFEPASEGISGNSGHHHFGGACGDVYNAALVLPRGQQHRGN ECGTCKRDGVGSGRKTTVQTVSAFCRTLGRPPSSDRCCPSPKSNINGLVY SGGGGENSTDGRSKSKRRMMESAKSTTTVKRVLCLSDGFGALAPRASREH PDHTPRDHAVSERVKKSLRGKNKSLGDDAIQGWKSKGGKPSESTDSKRGD QRAFTKKLLMKRWHPSGGKEVLGLGSTPCAGFCGESCGGVSSNGEASGKI RNTSSALTEESGTSWKQQGQRPGDTYEPDPKNKTFQNRSRRDTGAQSING TVAEVRWDGVHQVRTTMDV* back to topmRNA from alignment at F-serratus_M_contig1020:99009..101356- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1020.283.1 ID=mRNA_F-serratus_M_contig1020.283.1|Name=mRNA_F-serratus_M_contig1020.283.1|organism=Fucus serratus male|type=mRNA|length=2348bp|location=Sequence derived from alignment at F-serratus_M_contig1020:99009..101356- (Fucus serratus male) CTGGAAACTACCGCCCGCTCCGTAATCCTAAAAAAAAACAGCGGCGACTA
CATGTTTAGGACCGAACGCCCCAAGAGCTTTGAACCAGCCACCCCGTGGA
AAATTCAATTCAAACGTTCCACGACGTACCGAACGCACAGCCGACTCCTG
AAGCAGAAGCATACCGTGCGAGATCAGAATGCGCTGCTCGTGCTCGTATC
ACGAGCTTTCACCAGGCCTTGGAGGTGTGGGACGCTTCGCTCTGAATAGC
GATCTGGCAAATAAATGGCCTGTATAGCGAGCTATTCGTACAAGTAGGAA
CTTTTGAATAAAATACGACAAGACATTCACATATCTGAAAAAAAGCAACC
AAACTCCTCTGATTTGGAAGATACTACCAGTACAAACATGAGCACACCGT
ACGTTCTGATGCGGTGTACCCCGTGGTACTCGAATGGGTGGATCCTCCAC
GCATAAATGTTAAATCTACGGCCAAGGGTTGGTGCACTTGGTACAAAACA
TCACCCAATCCGCGAATGTTCCGTCTAGGAAAGTTCGAGAAATATATCTT
GGCGTCCATAAGAACATCCGATGCACAAGGGAAGGAGACGAGGAAGATAT
ACTTACGATTCCGTCGCGGCGACCAAACACTTATAAATTTTTTTCTAGGG
CATCCCTCCCTGTAAAGAAGATGCAGGGGCTCGCGCAGATACAACCGCCG
TCTTCGTGCCAGAAGCTAGAGGTCCACGCTCAAACAAAGCGAGGCTCGGT
CTTGCTCTCTGGTAGCCCTGGCGATGGTATACGTCGAAAGCAACGTCCCT
CGACAGCTGCGCATGGTTCTGCAGCTCCGCTCGAGTCTGCCACAGTGGAG
TCAGTAAAAAAAACATGGCAGGACGAGGGTCACGGTAGCGCGAAGCACGC
CACCAAGGAGGGGGCTTCCTTCGATGAAAATAAGAAAACTTGGGCATTTC
GGAACTGGTATTTTTCCACAGTGCTTCCCTCTCAACTTATTCCTCGCGAG
ATTGCCGTTCAGGCGGATGAACCAGGACAAAGCACTGCCCTTGCTCTCGC
GCTTCCTGCGGCTCCTTCTTGCCACCGAGTCGAGGTCGCCAGACCGTGCA
CTGCTCCTGTCACGAAACCACCAGGTCGCCGTCGAGACCGCCCGGACAAT
GACAGTGGTTGCCGCACGTCCCGAGGAGGACATCAACGGAGATGGTTCTC
GGCCCCGTTCATGCCCCCAAAACGTCTGACTATAATATCTGCACCATCCT
TCAAGAAAGCAGAATCAGCATACGAGTACAGCACCTTTGAACCAGCATCC
GAAGGCATAAGTGGCAATTCGGGTCACCATCACTTCGGCGGTGCCTGCGG
TGACGTTTACAACGCCGCTTTGGTGTTGCCGAGAGGCCAGCAACACCGAG
GGAACGAGTGCGGCACATGCAAGAGAGATGGCGTGGGTTCGGGTCGGAAG
ACTACAGTGCAAACTGTCTCCGCCTTTTGTAGGACGCTGGGACGACCACC
GTCATCGGATCGTTGTTGTCCTAGTCCGAAGAGTAACATCAACGGTCTCG
TGTATAGTGGAGGTGGAGGTGAAAACTCGACCGACGGGCGCAGCAAGAGC
AAGCGTCGGATGATGGAAAGCGCGAAATCAACGACAACCGTAAAAAGGGT
ACTCTGTCTGTCCGACGGATTTGGTGCACTGGCGCCACGTGCAAGTCGAG
AGCACCCCGACCACACACCGAGGGATCACGCGGTGTCAGAACGCGTTAAG
AAGTCGTTGCGGGGCAAAAACAAGTCATTGGGTGATGATGCCATACAGGG
TTGGAAGAGCAAAGGCGGCAAGCCGTCTGAATCGACCGACTCAAAGCGCG
GTGACCAACGTGCATTTACTAAGAAGCTTCTGATGAAGCGATGGCACCCT
TCGGGCGGTAAAGAAGTTCTAGGCCTAGGTTCGACTCCCTGTGCCGGATT
TTGCGGCGAATCCTGCGGCGGCGTTAGTTCAAACGGCGAAGCCTCCGGAA
AGATTCGTAATACTTCGTCTGCGTTGACAGAGGAGAGTGGTACGTCTTGG
AAGCAGCAGGGGCAGAGACCGGGGGATACCTATGAGCCTGATCCTAAAAA
CAAAACGTTCCAGAATCGTAGCAGGCGGGACACCGGAGCGCAATCTATTA
ATGGTACGGTCGCGGAAGTGAGATGGGATGGCGTACATCAGGTACGGACG
ACGATGGACGTATGAAAACTAGAAGCCGTTTGGCTAACTAGCGGGGCAGT
GGTCACGGCTGTGACGGTGGCCAGAGGCCTCACCCCAAAGCTGTTGTCGA
CCGCAACACACCACTCTAGCTCACTGCAATGAGCACAAACATGTCGAG back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1020:99009..101356- >mRNA_F-serratus_M_contig1020.283.1 ID=mRNA_F-serratus_M_contig1020.283.1|Name=mRNA_F-serratus_M_contig1020.283.1|organism=Fucus serratus male|type=CDS|length=3720bp|location=Sequence derived from alignment at F-serratus_M_contig1020:99009..101356- (Fucus serratus male) ATGTTTAGGACCGAACGCCCCAAGAGCTTTGAACCAGCCACCCCGTGGAA AATTCAATTCAAACGTTCCACGACGTACCGAACGCACAGCCGACTCCTGA AGCAGAAGCATACCGTGCGAGATCAGAATGCGCTGCTCGTGCTCGTATCA CGAGCTTTCACCAGGCCTTGGAGATGTTTAGGACCGAACGCCCCAAGAGC TTTGAACCAGCCACCCCGTGGAAAATTCAATTCAAACGTTCCACGACGTA CCGAACGCACAGCCGACTCCTGAAGCAGAAGCATACCGTGCGAGATCAGA ATGCGCTGCTCGTGCTCGTATCACGAGCTTTCACCAGGCCTTGGAGGAAA GTTCGAGAAATATATCTTGGCGTCCATAAGAACATCCGATGCACAAGGGA AGGAGACGAGGAAGATATACTTACGATTCCGTCGCGGCGACCAAACACTT ATAAATTTTTTTCTAGGGCATCCCTCCCTGTAAAGAAGATGCAGGGGCTC GCGCAGATACAACCGCCGTCTTCGTGCCAGAAGCTAGAGGTCCACGCTCA AACAAAGCGAGGCTCGGTCTTGCTCTCTGGTAGCCCTGGCGATGGTATAC GTCGAAAGCAACGTCCCTCGACAGCTGCGCATGGTTCTGCAGCTCCGCTC GAGTCTGCCACAGTGGAGTCAGTAAAAAAAACATGGCAGGACGAGGGTCA CGGTAGCGCGAAGCACGCCACCAAGGAGGGGGCTTCCTTCGATGAAAATA AGAAAACTTGGGCATTTCGGAACTGGTATTTTTCCACAGTGCTTCCCTCT CAACTTATTCCTCGCGAGATTGCCGTTCAGGCGGATGAACCAGGACAAAG CACTGCCCTTGCTCTCGCGCTTCCTGCGGCTCCTTCTTGCCACCGAGTCG AGGTCGCCAGACCGTGCACTGCTCCTGTCACGAAACCACCAGGTCGCCGT CGAGACCGCCCGGACAATGACAGTGGTTGCCGCACGTCCCGAGGAGGACA TCAACGGAGATGGTTCTCGGCCCCGTTCATGCCCCCAAAACGTCTGACTA TAATATCTGCACCATCCTTCAAGAAAGCAGAATCAGCATACGAGTACAGC ACCTTTGAACCAGCATCCGAAGGCATAAGTGGCAATTCGGGTCACCATCA CTTCGGCGGTGCCTGCGGTGACGTTTACAACGCCGCTTTGGTGTTGCCGA GAGGCCAGCAACACCGAGGGAACGAGTGCGGCACATGCAAGAGAGATGGC GTGGGTTCGGGTCGGAAGACTACAGTGCAAACTGTCTCCGCCTTTTGTAG GACGCTGGGACGACCACCGTCATCGGATCGTTGTTGTCCTAGTCCGAAGA GTAACATCAACGGTCTCGTGTATAGTGGAGGTGGAGGTGAAAACTCGACC GACGGGCGCAGCAAGAGCAAGCGTCGGATGATGGAAAGCGCGAAATCAAC GACAACCGTAAAAAGGGTACTCTGTCTGTCCGACGGATTTGGTGCACTGG CGCCACGTGCAAGTCGAGAGCACCCCGACCACACACCGAGGGATCACGCG GTGTCAGAACGCGTTAAGAAGTCGTTGCGGGGCAAAAACAAGTCATTGGG TGATGATGCCATACAGGGTTGGAAGAGCAAAGGCGGCAAGCCGTCTGAAT CGACCGACTCAAAGCGCGGTGACCAACGTGCATTTACTAAGAAGCTTCTG ATGAAGCGATGGCACCCTTCGGGCGGTAAAGAAGTTCTAGGCCTAGGTTC GACTCCCTGTGCCGGATTTTGCGGCGAATCCTGCGGCGGCGTTAGTTCAA ACGGCGAAGCCTCCGGAAAGATTCGTAATACTTCGTCTGCGTTGACAGAG GAGAGTGGTACGTCTTGGAAGCAGCAGGGGCAGAGACCGGGGGATACCTA TGAGCCTGATCCTAAAAACAAAACGTTCCAGAATCGTAGCAGGCGGGACA CCGGAGCGCAATCTATTAATGGTACGGTCGCGGAAGTGAGATGGGATGGC GTACATCAGGTACGGACGACGATGGACGTATGAGAAAGTTCGAGAAATAT ATCTTGGCGTCCATAAGAACATCCGATGCACAAGGGAAGGAGACGAGGAA GATATACTTACGATTCCGTCGCGGCGACCAAACACTTATAAATTTTTTTC TAGGGCATCCCTCCCTGTAAAGAAGATGCAGGGGCTCGCGCAGATACAAC CGCCGTCTTCGTGCCAGAAGCTAGAGGTCCACGCTCAAACAAAGCGAGGC TCGGTCTTGCTCTCTGGTAGCCCTGGCGATGGTATACGTCGAAAGCAACG TCCCTCGACAGCTGCGCATGGTTCTGCAGCTCCGCTCGAGTCTGCCACAG TGGAGTCAGTAAAAAAAACATGGCAGGACGAGGGTCACGGTAGCGCGAAG CACGCCACCAAGGAGGGGGCTTCCTTCGATGAAAATAAGAAAACTTGGGC ATTTCGGAACTGGTATTTTTCCACAGTGCTTCCCTCTCAACTTATTCCTC GCGAGATTGCCGTTCAGGCGGATGAACCAGGACAAAGCACTGCCCTTGCT CTCGCGCTTCCTGCGGCTCCTTCTTGCCACCGAGTCGAGGTCGCCAGACC GTGCACTGCTCCTGTCACGAAACCACCAGGTCGCCGTCGAGACCGCCCGG ACAATGACAGTGGTTGCCGCACGTCCCGAGGAGGACATCAACGGAGATGG TTCTCGGCCCCGTTCATGCCCCCAAAACGTCTGACTATAATATCTGCACC ATCCTTCAAGAAAGCAGAATCAGCATACGAGTACAGCACCTTTGAACCAG CATCCGAAGGCATAAGTGGCAATTCGGGTCACCATCACTTCGGCGGTGCC TGCGGTGACGTTTACAACGCCGCTTTGGTGTTGCCGAGAGGCCAGCAACA CCGAGGGAACGAGTGCGGCACATGCAAGAGAGATGGCGTGGGTTCGGGTC GGAAGACTACAGTGCAAACTGTCTCCGCCTTTTGTAGGACGCTGGGACGA CCACCGTCATCGGATCGTTGTTGTCCTAGTCCGAAGAGTAACATCAACGG TCTCGTGTATAGTGGAGGTGGAGGTGAAAACTCGACCGACGGGCGCAGCA AGAGCAAGCGTCGGATGATGGAAAGCGCGAAATCAACGACAACCGTAAAA AGGGTACTCTGTCTGTCCGACGGATTTGGTGCACTGGCGCCACGTGCAAG TCGAGAGCACCCCGACCACACACCGAGGGATCACGCGGTGTCAGAACGCG TTAAGAAGTCGTTGCGGGGCAAAAACAAGTCATTGGGTGATGATGCCATA CAGGGTTGGAAGAGCAAAGGCGGCAAGCCGTCTGAATCGACCGACTCAAA GCGCGGTGACCAACGTGCATTTACTAAGAAGCTTCTGATGAAGCGATGGC ACCCTTCGGGCGGTAAAGAAGTTCTAGGCCTAGGTTCGACTCCCTGTGCC GGATTTTGCGGCGAATCCTGCGGCGGCGTTAGTTCAAACGGCGAAGCCTC CGGAAAGATTCGTAATACTTCGTCTGCGTTGACAGAGGAGAGTGGTACGT CTTGGAAGCAGCAGGGGCAGAGACCGGGGGATACCTATGAGCCTGATCCT AAAAACAAAACGTTCCAGAATCGTAGCAGGCGGGACACCGGAGCGCAATC TATTAATGGTACGGTCGCGGAAGTGAGATGGGATGGCGTACATCAGGTAC GGACGACGATGGACGTATGA back to top
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