mRNA_F-serratus_M_contig102.276.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: D7FQT3_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT3_ECTSI) HSP 1 Score: 392 bits (1007), Expect = 7.530e-135 Identity = 193/218 (88.53%), Postives = 209/218 (95.87%), Query Frame = 1 Query: 148 MNLGMQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 M++ QQEYPGL+DGEIS+GTTIMAV YDGGVIMGADSRTSTGTYVANRVSDKIT+LHD+IYACRSGSAADTQA++DYVRYFLASHS ELGRLP VKTAA + RGLCY NKDRLLAGMIIAGWDPV+GG+VYEIPLGGT++KQKFAIGGSGSTYIYGHVD++FKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVS EYIPGD+LPFGP Sbjct: 1 MDIATQQEYPGLKDGEISTGTTIMAVQYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIYACRSGSAADTQAITDYVRYFLASHSVELGRLPLVKTAAKMARGLCYNNKDRLLAGMIIAGWDPVDGGTVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSCEYIPGDQLPFGP 218
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A836CD01_9STRA (Proteasome endopeptidase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD01_9STRA) HSP 1 Score: 362 bits (928), Expect = 7.120e-123 Identity = 177/214 (82.71%), Postives = 198/214 (92.52%), Query Frame = 1 Query: 160 MQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 M +YPGL+ EIS+GTTIMA YDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQA+SDYVRYFL+SHSAE+GRLP+VKTAA+L R +CY NKD LLAGMIIAGWDPV GGSVYEIPLGGT++KQ+FAIGGSGSTYIYGHVD+++KE MTKEEA+ FVRKAI+HAMARDGSSGGVIR+V IDK GV REYIPG++LP+GP Sbjct: 3 MPGDYPGLKPNEISTGTTIMACMYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAISDYVRYFLSSHSAEVGRLPTVKTAANLARRICYNNKDNLLAGMIIAGWDPVHGGSVYEIPLGGTIMKQQFAIGGSGSTYIYGHVDAAYKEGMTKEEAKIFVRKAIAHAMARDGSSGGVIRIVTIDKDGVEREYIPGNELPYGP 216
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: W7TIP5_9STRA (Proteasome subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIP5_9STRA) HSP 1 Score: 328 bits (840), Expect = 1.880e-109 Identity = 158/208 (75.96%), Postives = 186/208 (89.42%), Query Frame = 1 Query: 178 GLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 GL+ GE+++GTTIMAV +DGGV++GADSRTSTGTYVANRVSDK+TALH +IY CRSGSAADTQA++DYVRYFLASH+ +LGR P+V TAA L+ L Y+NKD LLAG+II GWDP +GG VY + LGGT+ +QKF+IGGSGSTYIYGHVD +FKENMT+EE Q FV+KAISHAMARDGSSGGVIRMV IDK+GVSRE+IPGDKLP+GP Sbjct: 13 GLKPGEVATGTTIMAVEFDGGVVLGADSRTSTGTYVANRVSDKLTALHHHIYCCRSGSAADTQALADYVRYFLASHAIDLGRTPAVYTAAKLMSTLIYRNKDNLLAGVIIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKENMTREECQNFVKKAISHAMARDGSSGGVIRMVTIDKSGVSREFIPGDKLPYGP 220
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S3M7L5_9STRA (Proteasome subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7L5_9STRA) HSP 1 Score: 319 bits (818), Expect = 3.430e-106 Identity = 152/208 (73.08%), Postives = 185/208 (88.94%), Query Frame = 1 Query: 178 GLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 GLR+GE+SSGTTIMAVT+DGGV++GADSRTSTG+YVANRVSDKI +HDY++ACRSGSAADTQAVSDYV+Y++ SHS ELGRLP VKT A+L+R +CY NKDR+ AGMI GWDP EGG VYEIPLGGT+++QKFA+GGSGS+YIYG VDS+++E M+KEE + FV+ AISHAMARDGSSGGVIR+VVID++G+ +E + GD LPF P Sbjct: 8 GLREGEMSSGTTIMAVTFDGGVVLGADSRTSTGSYVANRVSDKIVPIHDYVWACRSGSAADTQAVSDYVKYYINSHSTELGRLPRVKTCANLMRKICYNNKDRMQAGMICGGWDPYEGGQVYEIPLGGTMMQQKFALGGSGSSYIYGLVDSTYREGMSKEECKVFVKTAISHAMARDGSSGGVIRLVVIDQSGIEKEVVLGDNLPFKP 215
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S2WTH2_9STRA (Proteasome endopeptidase complex n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTH2_9STRA) HSP 1 Score: 317 bits (811), Expect = 4.550e-105 Identity = 147/206 (71.36%), Postives = 182/206 (88.35%), Query Frame = 1 Query: 184 RDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 RDGE+S+GTTIMA +DGGV++GADSR STGTY+ANRVSDK+ ALHD I+ CRSGSAADTQA+SDYVRY+L+SH+ E+ R P+VKTAA+L R + Y+NKD LLAG+I+ GWDPVEGGSVY IPLGGT++K FAIGGSGSTYIYGHVD+ +KE M++EEAQ FV+K+I+HAMARDGSSGG+IR+V +D GV R+Y+PGD+LP+GP Sbjct: 14 RDGEVSTGTTIMACCFDGGVVLGADSRVSTGTYIANRVSDKVAALHDTIFMCRSGSAADTQAISDYVRYWLSSHATEVNRPPTVKTAATLARRIAYENKDALLAGVIVGGWDPVEGGSVYVIPLGGTLMKMPFAIGGSGSTYIYGHVDAQYKEGMSREEAQAFVKKSIAHAMARDGSSGGIIRLVTVDANGVERDYVPGDQLPYGP 219
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: F0W411_9STRA (Proteasome subunit beta n=2 Tax=Albugo TaxID=65356 RepID=F0W411_9STRA) HSP 1 Score: 301 bits (771), Expect = 4.750e-99 Identity = 145/214 (67.76%), Postives = 180/214 (84.11%), Query Frame = 1 Query: 160 MQQEYPG--LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795 MQ+ Y L++GE+ +GT+I+AV +DGGV++GADSRTSTG YVANRVSDK+T LHD IY CRSGSAADTQA+SDYVRYFL+SHS ++G+LP V TAA+L R LCY NKDRLLAG+I+AGWDPV GG VY IP+GG ++KQ FAIGGSGSTYIYG VD++++ +MT+EE Q FV+K ++HAMARDGSSGGVIR V I K V+RE+ G++LPF Sbjct: 1 MQEMYAANFLKNGEVDAGTSIIAVKFDGGVVLGADSRTSTGAYVANRVSDKLTGLHDRIYCCRSGSAADTQALSDYVRYFLSSHSLDVGKLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPVHGGQVYSIPIGGAMVKQNFAIGGSGSTYIYGLVDAAYRPDMTQEECQAFVKKMLAHAMARDGSSGGVIRTVTITKDSVTREFTSGEQLPF 214
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: K3WDU5_GLOUD (Proteasome subunit beta n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WDU5_GLOUD) HSP 1 Score: 300 bits (769), Expect = 1.020e-98 Identity = 143/209 (68.42%), Postives = 177/209 (84.69%), Query Frame = 1 Query: 169 EYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795 E+ L+ GEI +GT+I+AV +DGGV++GADSRTSTGTY+ANRVSDK+T LHD I+ CRSGSAADTQA+SDYV+YFL+SH+ +LGRLP V TAA+L R LCY NKDRLLAG+I+AGWDP++GG V+ +P+GG +++Q FAIGGSGSTYIYG VD+ +K MTKEE Q+FV+KA++HAMARDGSSGGVIR V I K V RE+ GD LPF Sbjct: 8 EFSMLKRGEIDAGTSIIAVRFDGGVVLGADSRTSTGTYIANRVSDKLTPLHDRIFCCRSGSAADTQALSDYVKYFLSSHAVDLGRLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPIKGGQVFSVPIGGAMVEQDFAIGGSGSTYIYGLVDAEYKPGMTKEECQKFVKKALAHAMARDGSSGGVIRTVTITKDEVVREFTSGDALPF 216
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S2HYA4_9STRA (Proteasome subunit beta n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYA4_9STRA) HSP 1 Score: 299 bits (766), Expect = 5.040e-98 Identity = 146/215 (67.91%), Postives = 177/215 (82.33%), Query Frame = 1 Query: 157 GMQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 G E LR E+S+GTTIMA+ ++GGV+MGADSR STG+YVANRVSDK+ LHD I+ CRSGSAADTQA++DYV+++LAS + E GR P+VKTAA L+R LCY+NKDRLLAG+I+ GWDPV+GGSVY IPLGGT IK FAIGGSGSTYIYG DS FKENMT++EA V+KAISHAMARDGSSGG+IR V + + RE+IPG++LP+GP Sbjct: 17 GKSAETRNLRPNELSTGTTIMAIPFEGGVVMGADSRVSTGSYVANRVSDKVAQLHDRIWCCRSGSAADTQALTDYVKHYLASLAIETGRRPTVKTAAHLMRRLCYENKDRLLAGVIVGGWDPVDGGSVYNIPLGGTCIKMPFAIGGSGSTYIYGLTDSEFKENMTRDEALTLVKKAISHAMARDGSSGGIIRTVTVTEESNDREFIPGNQLPYGP 231
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A2D4BVR2_PYTIN (Proteasome subunit beta n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BVR2_PYTIN) HSP 1 Score: 298 bits (763), Expect = 8.010e-98 Identity = 144/205 (70.24%), Postives = 176/205 (85.85%), Query Frame = 1 Query: 181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795 L+ GEI +GT+I+AV +DGGV++GADSRTSTGTY+ANRVSDK+T LHD IY CRSGSAADTQA+SDYVR+FLASH+ +LGR P V TAA+L R LCY NKDRLLAG+I+AG DPV+GG V+ IP+GG +++Q FAIGGSGSTYIYG+VDS+++ NMTKEE Q FV+KA++HAMARDGSSGGVIRMV I V RE++ G +LPF Sbjct: 11 LKPGEIDAGTSIIAVRFDGGVVLGADSRTSTGTYIANRVSDKLTPLHDRIYCCRSGSAADTQALSDYVRHFLASHAMDLGRRPKVHTAANLFRSLCYNNKDRLLAGIIVAGVDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGYVDSAYRPNMTKEECQSFVKKALAHAMARDGSSGGVIRMVTITADDVVREFVSGTELPF 215
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A0W8D518_PHYNI (Proteasome subunit beta n=15 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8D518_PHYNI) HSP 1 Score: 298 bits (762), Expect = 1.170e-97 Identity = 143/205 (69.76%), Postives = 175/205 (85.37%), Query Frame = 1 Query: 181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795 L+ GE+ +GT+I+AV ++GGV++GADSRTSTGTYVAN VSDK+T LHD ++ CRSGSAADTQA+SDYVRY+L+SHS ELGRLP V TAA+L R LCY NKDRLLAG+I+AGWDPV+GG V+ IP+GG +++Q FAIGGSGSTYIYG VDS ++ NMTKEE QQFV+KA++HAMARDGSSGGVIR V I + V R++ GD LPF Sbjct: 12 LKPGEVDAGTSIIAVRFNGGVVLGADSRTSTGTYVANCVSDKLTPLHDRLFCCRSGSAADTQALSDYVRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQQFVKKALAHAMARDGSSGGVIRTVTITENEVVRDFTSGDDLPF 216 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig102.276.1 >prot_F-serratus_M_contig102.276.1 ID=prot_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=polypeptide|length=219bp MNLGMQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVback to top mRNA from alignment at F-serratus_M_contig102:825717..832672+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig102.276.1 ID=mRNA_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=mRNA|length=6956bp|location=Sequence derived from alignment at F-serratus_M_contig102:825717..832672+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig102:825717..832672+ >mRNA_F-serratus_M_contig102.276.1 ID=mRNA_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=CDS|length=1314bp|location=Sequence derived from alignment at F-serratus_M_contig102:825717..832672+ (Fucus serratus male)back to top |