|
Homology
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A2R5GI80_9STRA (Proteasome subunit beta n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI80_9STRA) HSP 1 Score: 285 bits (730), Expect = 7.190e-93 Identity = 138/208 (66.35%), Postives = 175/208 (84.13%), Query Frame = 1
Query: 175 PG-LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795
PG L+ GE+ GT+IMAV++ GVI+GADSRTSTG+Y+ANRVSDK+T +HDY+Y CRSGSAADTQA+SD VR L +H+ ELGR P+VKTAA L + CY+ KDRL+AG+I AG+DPVEGG+VY IPLGG +IKQ FAIGGSGSTYIY + D++++ENMT++EA FV+KA++HAMARDGSSGGVIR +ID+ GV R + PG++LPF
Sbjct: 4 PGTLKKGEVDLGTSIMAVSFGSGVIVGADSRTSTGSYIANRVSDKLTPVHDYVYCCRSGSAADTQAISDIVRTQLGNHAVELGRAPAVKTAAKLFQRYCYEYKDRLMAGIICAGFDPVEGGTVYSIPLGGAMIKQPFAIGGSGSTYIYAYCDANYRENMTRDEAHTFVKKALAHAMARDGSSGGVIRTAIIDENGVERFFTPGNELPF 211
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A225W0G6_9STRA (Proteasome endopeptidase complex n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W0G6_9STRA) HSP 1 Score: 299 bits (766), Expect = 7.700e-93 Identity = 152/253 (60.08%), Postives = 191/253 (75.49%), Query Frame = 1
Query: 37 TFFCSTS*KFVNIVLSCVDTSQRLKILRVSYQDIPRKMNLGMQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795
TF ST FV + +C +L ++ K + E L+ GE+ +GT+I+AV + GGV++GADSRTSTGTYVANRVSDK+T LHD +Y CRSGSAADTQA+SDYVRY+L+SHS ELGRLP V TAA+L R LCY NKDRLLAG+I+AGWDPV+GG V+ IP+GG +++Q FAIGGSGSTYIYG VD+ ++ +MTK+E QQFV+KA++HAMARDGSSGGVIR V I + V R++ GD LPF
Sbjct: 390 TFISSTERDFVARIAACT-------VLTSPFKPAMTKQEV---DEGGYLKPGEVDAGTSIIAVRFKGGVVLGADSRTSTGTYVANRVSDKLTPLHDRLYCCRSGSAADTQALSDYVRYYLSSHSVELGRLPKVDTAANLFRSLCYHNKDRLLAGIIVAGWDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDAEYRPDMTKDECQQFVKKALAHAMARDGSSGGVIRTVTITENEVVRDFTSGDDLPF 632
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A484E7R9_BRELC (Proteasome subunit beta n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7R9_BRELC) HSP 1 Score: 285 bits (728), Expect = 1.660e-92 Identity = 135/205 (65.85%), Postives = 172/205 (83.90%), Query Frame = 1
Query: 181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795
L+ GE+ +GT+I+A+ + GGV++GADSRTS G YVANRVSDK+T LHD +Y CRSGSAADTQA+SDYVRY+L+SHS ELGRLP V TAA+L R LCYQNK RLLAG+I+AGWDPV+GG V+ IP+GG +++Q ++IGGSGSTYIYG +DS ++ +MT++E Q+ V+KA++HAMARDGSSGG+IR V I + V REY GD LPF
Sbjct: 12 LKPGEVDAGTSIIAMRFKGGVVLGADSRTSMGAYVANRVSDKLTPLHDRLYCCRSGSAADTQALSDYVRYYLSSHSIELGRLPKVGTAATLFRSLCYQNKGRLLAGIIVAGWDPVKGGQVFSIPIGGAMVEQDYSIGGSGSTYIYGLMDSEYRPDMTQDECQRLVKKALAHAMARDGSSGGIIRTVTITEKDVVREYTCGDDLPF 216
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7R9W1D7_9STRA (Proteasome subunit beta n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W1D7_9STRA) HSP 1 Score: 285 bits (729), Expect = 2.010e-92 Identity = 137/207 (66.18%), Postives = 173/207 (83.57%), Query Frame = 1
Query: 181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801
L+ GE+S+GTTIMA+ +DGGV+MGADSRTSTGTY+A R+SDKIT LHD I+ CRSGSAADTQA+SDYV+++L + E GR P+VK AA+L+R L Y+NKD L+AG+I+ GWDPVEGGSVY I LGG+ IK FAIGGSGSTYIYG +D+ FKE M+++EA++ V+K ISHAMARDGSSGG+IR VV+ + R +IPG+KLP+GP
Sbjct: 28 LKKGEVSTGTTIMAIPFDGGVVMGADSRTSTGTYIAVRISDKITQLHDRIWCCRSGSAADTQALSDYVKHYLGQLAIETGRRPTVKIAANLMRKLIYENKDNLMAGVIVGGWDPVEGGSVYNIALGGSCIKMPFAIGGSGSTYIYGLIDAKFKEGMSQDEAEELVKKTISHAMARDGSSGGIIRTVVVTEEKNVRNFIPGNKLPYGP 234
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: D0MVQ0_PHYIT (Proteasome endopeptidase complex n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVQ0_PHYIT) HSP 1 Score: 299 bits (765), Expect = 2.770e-92 Identity = 143/205 (69.76%), Postives = 176/205 (85.85%), Query Frame = 1
Query: 181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795
L+ GE+ +GT+I+AV ++GGV++GADSRTSTGTYVANRVSDK+T LHD ++ CRSGSAADTQA+SDYVRY+L+SHS ELGRLP V TAA+L R LCY NKDRLLAG+I+AGWDPV+GG V+ IP+GG +++Q FAIGGSGSTYIYG VDS ++ NMTKEE Q+FV+KA++HAMARDGSSGGVIR V I + V RE+ G+ LPF
Sbjct: 467 LKPGEVDAGTSIIAVRFNGGVVLGADSRTSTGTYVANRVSDKLTPLHDRLFCCRSGSAADTQALSDYVRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQRFVKKALAHAMARDGSSGGVIRTVTITENEVVREFTSGEDLPF 671
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 396.7 |
Seed ortholog evalue | 6.8e-108 |
Seed eggNOG ortholog | 2880.D7FQT3 |
Preferred name | PBA1 |
KEGG ko | ko:K02738,ko:K11507 |
KEGG Pathway | ko03050,map03050 |
KEGG Module | M00340 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0019774,GO:0032991,GO:0044424,GO:0044464,GO:1902494,GO:1905368,GO:1905369 |
EggNOG free text desc. | Proteasome subunit beta |
EggNOG OGs | KOG0174@1,KOG0174@2759 |
Ec32 ortholog description | Peptidase T1A, proteasome beta-subunit |
Ec32 ortholog | Ec-16_000630.1 |
EC | 3.4.25.1 |
COG Functional cat. | O |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko01000,ko01002,ko03036,ko03051 |
Exons | 5 |
Model size | 1093 |
Cds size | 657 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928822.661134-UTR-F-serratus_M_contig102:825716..825863 | 1622928822.661134-UTR-F-serratus_M_contig102:825716..825863 | Fucus serratus male | UTR | F-serratus_M_contig102 825717..825863 + |
1690962588.5495963-UTR-F-serratus_M_contig102:825716..825863 | 1690962588.5495963-UTR-F-serratus_M_contig102:825716..825863 | Fucus serratus male | UTR | F-serratus_M_contig102 825717..825863 + |
1622928822.751902-UTR-F-serratus_M_contig102:832383..832672 | 1622928822.751902-UTR-F-serratus_M_contig102:832383..832672 | Fucus serratus male | UTR | F-serratus_M_contig102 832384..832672 + |
1690962588.611693-UTR-F-serratus_M_contig102:832383..832672 | 1690962588.611693-UTR-F-serratus_M_contig102:832383..832672 | Fucus serratus male | UTR | F-serratus_M_contig102 832384..832672 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928822.679551-CDS-F-serratus_M_contig102:825863..825923 | 1622928822.679551-CDS-F-serratus_M_contig102:825863..825923 | Fucus serratus male | CDS | F-serratus_M_contig102 825864..825923 + |
1690962588.5628638-CDS-F-serratus_M_contig102:825863..825923 | 1690962588.5628638-CDS-F-serratus_M_contig102:825863..825923 | Fucus serratus male | CDS | F-serratus_M_contig102 825864..825923 + |
1622928822.6938827-CDS-F-serratus_M_contig102:831137..831337 | 1622928822.6938827-CDS-F-serratus_M_contig102:831137..831337 | Fucus serratus male | CDS | F-serratus_M_contig102 831138..831337 + |
1690962588.5726006-CDS-F-serratus_M_contig102:831137..831337 | 1690962588.5726006-CDS-F-serratus_M_contig102:831137..831337 | Fucus serratus male | CDS | F-serratus_M_contig102 831138..831337 + |
1622928822.7116501-CDS-F-serratus_M_contig102:831568..831772 | 1622928822.7116501-CDS-F-serratus_M_contig102:831568..831772 | Fucus serratus male | CDS | F-serratus_M_contig102 831569..831772 + |
1690962588.5828567-CDS-F-serratus_M_contig102:831568..831772 | 1690962588.5828567-CDS-F-serratus_M_contig102:831568..831772 | Fucus serratus male | CDS | F-serratus_M_contig102 831569..831772 + |
1622928822.726298-CDS-F-serratus_M_contig102:831941..832086 | 1622928822.726298-CDS-F-serratus_M_contig102:831941..832086 | Fucus serratus male | CDS | F-serratus_M_contig102 831942..832086 + |
1690962588.5963316-CDS-F-serratus_M_contig102:831941..832086 | 1690962588.5963316-CDS-F-serratus_M_contig102:831941..832086 | Fucus serratus male | CDS | F-serratus_M_contig102 831942..832086 + |
1622928822.7385926-CDS-F-serratus_M_contig102:832335..832383 | 1622928822.7385926-CDS-F-serratus_M_contig102:832335..832383 | Fucus serratus male | CDS | F-serratus_M_contig102 832336..832383 + |
1690962588.604346-CDS-F-serratus_M_contig102:832335..832383 | 1690962588.604346-CDS-F-serratus_M_contig102:832335..832383 | Fucus serratus male | CDS | F-serratus_M_contig102 832336..832383 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig102.276.1 >prot_F-serratus_M_contig102.276.1 ID=prot_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=polypeptide|length=219bp
MNLGMQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRV SDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAA SLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGS GSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVID KTGVSREYIPGDKLPFGP* back to topmRNA from alignment at F-serratus_M_contig102:825717..832672+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig102.276.1 ID=mRNA_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=mRNA|length=6956bp|location=Sequence derived from alignment at F-serratus_M_contig102:825717..832672+ (Fucus serratus male) CCGCATTTGAGATACTCTTGACGTGCTTACTACTGCACTTTTTTCTGCTC
CACCAGCTGAAAGTTTGTGAATATTGTGTTGTCCTGTGTAGACACCTCAC
AGCGCTTGAAAATTTTGCGTGTATCATATCAGGATATACCGCGGAAGATG
AATCTCGGGATGCAACAAGAATACCCAGGCCTGAGGGACGGCGAAATATC
CTCTGGGGTGAGTTTCTCTTATCCCACCCGGTTGTGGCTGCAAAGGCAGA
TCATTTACGTAATACTCCCTCCACCAGCATGTTGTAGCAATAACGGACGA
ACTACAAATGCAGTGAGATTACTTTCCTTCGTACACAACCACTGAACAAA
TTTTGAGGCGGTGAACACAAACAAGGATTACGAACGAGACTTTTCTTGAA
CGTTGTTCCAGAGCATTTATAAATACATTTCAGAGGTACTCGTACTTGTT
AAAATATTACAGCTGTCTGGTTCTTCTACAGAATGCAAAGCAAGTTTCGC
TCAACTTTTCTCTCGATACTTTACGGTTTGTTTTGTTCGCACTTGTTACC
ATATCTTATTGGGCTGGAAATTCAAAATTCTTGAAATCTGAAATCGAGTA
GATTTCAGATTTCGGGCAAACTTCTGCATCCCAGAATAAAATTTTCTTGT
GGGACTCTGTGTTTTGTTTTGTGTGTGTTGGTTTTCTTCCCATCCATTCT
GGACATCAAGTTTGTTGGACGTACCAGCCGGGGTCACACAGGAGGAAGGT
CACACGGGATTTTCCATCCACCTTCCTTCTGCGGTGCGTGCCTTAATTTT
TATCGCGAGAAGAATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTCG
AATTTTGTGTACAAACGAATTAATCGTTCTCCACGCGTTGGGCATTTTTA
TTTTGGTTTTTAGTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAAC
TCACGTCCCAACGTGTCAGAAGGTTACGAGGTACCTACTGAGCTACCGGG
GCGACCGGCTCTGTTGTTGTTTATCTCACATTAACTGATCCGCTACGAAT
CCAGCCGTGGTCACAAGATAGACGGGACCAAACCAGATCAAAAACCTGTA
ATACTTTCCGAGATAAGCAGGGAAAAAATATATACCTGGTAAAAGACAAC
GGACAAGAAACTGGAAACTGAAAATTAAACAAAGTCATGGAGGCGTACTC
GATACAAAATGATTGGTTGAAGAAATAGATAGACGAGACGACTTCGGGCT
ACCCAGTGAGGGGCATGCGTAAGACATATGTTTGTGTTCACACAGCCACC
ACAGCGGTGAAACTTCCAACATGCTTCCGGCAGGGACAAGCGATGGTTTG
TGCTGCTCTCTTATAATAGTCTAATGCTCTCTTCGACAAAGCCCGGAAAA
AAAAGTATAGGTTGCTCTCCAATTTCAGTACTACAATTTGTTACGTAATA
CCGGTATGTGTAATACATGCACAGCACCGAGTGCTTTACTGGGAAACGTG
GCCTCGACGGAAACGATATGTATAACGAGTAGCTGCTGTGTGAGTTGCAG
CAACAGTTTAGTTGGTGGTGGACCCACTTCAAGCCTACTAATTCAATCTC
ACCCCGCGGCCCGGCGCGCTTTTGTTTGGTAAGGTGTGCATTCTCTTGAG
TAGAGGTATTTATAATTCTGTGGGTCATGTTTGTACCAGCGTGCGAGGTC
GCAAGAGTACAAACAAATGACTGCATCGTGGCAGCGAGAGCGATTCCTGC
TGCCACCACCCCGATCGTTTCCCCCAGTAACCTTCATCACCAAAGGCTTG
AGTTTGGCTCATAATCGCTCGGGCTGCTATGTCCCTAATCTCTGTGCTAC
GCGTCGGCGTGTAACGACTGGTTGCTGCTTCTCTCTTTCTGCTCTCTTCA
GCACAGACTAAAAACTATTGAACTATAGTACTACGTACATATACTACAGT
ACAGTTAGTTTATCTATGACTCTGGTACTGGGAAACGTGGTCTCGGCGGG
GAAAATCTGTTGTGCGAGTAGCTGCTCTGTGAGTCGCAGCAGCAGTTTAG
TTGGAGGAAGACCTACGTGAAGCCTACTCCTTGGATCTCTTCTTGCGGCC
GGACGCGTCTTGGTATATCGTTAGTTGTGCATTTTCTTGAGGAGAACTGT
TCAGAACTATATGGGCCCTGTTTGTACGAACGTGCAAGGTCTCTGGAGTA
TAAACAAATAACCGCATCGTGGCAGCGACAGCGATACCTGCTGCCAGTGC
GCCAGCGTTTCCATCAACAATTTTCATCCCTGAAAGCTTGAGTTTGACCC
ACAATCACTCGGGCTGCTGGCGCTACTCTCCGTGCTACGAGTCGGCGTGT
CATCCGGCCATAGGTTTGCTCCATTACAACAAGTATCAAAAGCCACAAAT
AAATACCCTGGGCATAGCCAAAAGCCTGACCATGTAACACAAAAACGATT
TTCCAGAGAGCCGATCTCTCTTGAAAATGGGTGCTCATTTTCAAGAATAT
GTCGACCTCGCCCGATTCTTGAAAATCAGATTCTTGAGAATGGGCGGATT
TCAAGTCCATAAGATGGAATTTTCTGTTGAAATCCAGAAATGGACCGATT
CCAGATTTCAAGAATCCTGGATTTCGGTCCCATTAAGACTTGGCCTTACC
GCCCGTGTGGGATTTCGTGAGTTCGACTGGTGCCCGGGTGATTGCTTTTA
TTCTGATTTCCCTAGCGGAAAGCGTGAGAAAGTGAGTAAGTAAAATTCAT
CCATCGATTCATGCGGTGTTATGGGTGCTGAACGTGCATCGCGATACAAA
ATCGTAGGCGTGAACCGGGGAGAGATGACAAGATCCTTGGTGACCACAGG
CAGGATAACGTTGCTATGGTACCAAGAGGTGGAATTTGTAACCAATAATA
CCGCCGGTACTTTCAACATGCCCACCTCATACCAATAGTGGGTGTGGGAA
AGAGAGGCGAATATTAGTTGGTCTATGGTGACCTGTCAAGGCAGCACTCG
TTCGGAGGTTTACTGGCCCCGTGCCGGCGGAGAACGCCATTGGTACGCAT
TGCGTGGACCCGATAAACTCGGGACTGACCCGATGGCGTATGGCGGTTTA
AAATAAATAAATGGACGCCGCCGCGAAACTCGGGAGGAATCCCGTAAGTA
AGCACCATATTCAGCCCGAGTATGGAGATGAGCAGGCTGACGCGGGACGG
GACTGCCGAACCCGTCTCGTGAGACCAAATTATCAGGCACGAACGCGGAC
AGGAAAATACTTCGTATTCATTTTTCCTGTTCAGCTGACCACGTGCAGGA
CGGCAACCTTCTCCGCTTGATCCATACTCTTGCTATATGTGTGACCATAT
AATAGTACGTTGATGCATATCGGTTGTGATAAGACCCAAACAAACAATGT
CTGTTTTGTCTGTGCAGCATATGATGCCACCTAAGCGTTTTGACATTTTT
CGCCCTGTGTGGGATGCTCAGAACGTTTAGATCGTTCATTTAAAATAAAA
TAAAATAACTGCACCAGTAGTGGGTATGAGAATAGAGGAGAGTCCAGATT
GGTCCATAGGAATACTGTACTTGAATAGGCAGCACCTGTTACTTGAACTA
TCTTGAGAAAAACTGGCCTGGCCCCGTGCCCGCGGGCTCTCGGCGGTGAC
CGCCATTGATACGCAAATATCGACCAAAGAGGCTCCGGGAATAACCCGAT
CGCGGTTGACGGCATAGATGGACGCCGTCGTGGAAATCGGCATGAATCCC
GTGAATATGCATCAGATTCGGCCTTAGTGTGGAAAATAAGCGGGCTGACG
CGGGATGGGACAGCCGAACCTAACTCGCGAGACCAAATTGTCACGCGTGA
ACGGGGACAGGGGAACATTGTTTTCCCTTTTCAGCTGAACACGAGCAGGA
TTGACAACCATATCCTCTGATACCTTGTCTGCTGAATGCGATGACCGTAC
ATTCTGCTCTATGTAGATCTTACTTGCACTGGTATTACAGATTCGAGTTA
TAATATTAATAGTCACCAATATTCGTTCGTATGCGCGATTCTGTTTGTAT
CGCACATTTAACCCAGTTTGCCTAATTAATAAATGTGTAGACCATACACA
CGTGCAGGTTTGGCAACCTTACCCGGTTGATCCATACTCTTGCTACATGT
GTGTGACCATACATATACACTGTACATATAAAAGGTGCGGAAAATAGAAA
ATAGAGGTACATGTCAATTGGTCCGTGGGGTTACCTATCTAAATAAGCAG
CACTCGTTACTCGAACAACCTTTGGGATACTGGCCATGTGCCGGCGGATA
CTCTGAAGTGAACGCCATCGGAACGCAGTTGCGTGACCCGATAAATTCGG
CACTGACCCGATGGCGTTTGGTGTTGGACGGTTTAGTCTAGATGGACGCC
GTCGCGGAAGGCGGGAGGAAGGAGAGGAGCCCTTTAGTAAGCACCAGGTT
TTCAGCCTGAGTGTGGAGAGTGAGTGTGGGCTGACGCGGGACGGGATGGC
CAAACCTGTCTCGCGTGGCCAAATTCTCAGGCGTGAACAGAGACAGGGAA
AAATCGTTCTCCCTGTTAAGACTACGAACAGGATTGGCAACCATACCTGG
TTGATACCCACCTTGCTAAAAGTGATCAACCGTTTCCCAGAAATGTTTAC
CTCTGTGGTGCCGGCAGATGCAACGATTGCTGCACCACGCCAACACTCTC
TAGACTTGAAATAGCACAAAGCCTTCACCTGGTGGTGTCGTATCGTGAGG
AGTTTTTCACGTGAGCTCTGGGCCTTAAGGCAGCGACCGCACTAAATTGT
TCACGACTGTCGAGGAGCAATCGCGAGAGAAAATAATTCGGGACTACCCG
TAGGTCCCGTCCCGTCGCAGAACTCACCAAAGAAGTGCTTTGGCGAGGTA
CTATTAGCGATTATGCATCTTGGTTCTGTATATTTTTTTATATATCGCTC
GGCCGACGTCTGACTTTTTTCGCAGTTTTCTATCGCCGACGACCACGACA
TAACTCGGTTGCCTTTTCAAAAACCATGCGAACATTACAGTTGGTCTGTT
GACATTAAAGTCGCACATAAAAGAGTCTTCGGAGGAAGATTATTTGCCAT
TTATCTGTGCTCGCCTGTCAAGATGGTTTATTTCACTACACAGAGGGAGG
TTTTTGACTTTCCAATGAGGGATCTCCAATTTTCTGACTGTTCTCGTCCA
GGTTGAACCCATGCTAAGAGTCGCCCTTGCCTCCAACTCTTGGGACCCAT
GCTAAGTGTCGCCCTTGCCTCCAACTCTTGGGAGCCATGCTTAGAGTAGT
ACAAACGCAGGAATCTCGTGTCACCCCGTATTTCCCCGTGATGAACGCCG
ACCTCCGTGCTTCTGATTTTGGAACAATCATCCGCACGCTTCACGCTTCG
TTGCTGACCTCGTGTTCCCAGACAACCATCATGGCGGTTACCTACGACGG
CGGAGTCATTATGGGCGCAGACTCGCGGACATCGACAGGGACGTACGTGG
CCAACCGCGTGAGCGACAAAATCACAGCATTGCATGATTACATCTATGCC
TGTCGGTCGGGTTCTGCGGCTGATACCCAGGCCGTTTCGGACTACGTTCG
CTACTTCCTAGCGTCTCACAGGTGTGGTGTGGGTGACCTGTTATTTAGTG
GCAAAAATCAAGTTTTGGCATTGTCACTTAGACGCCGTTTTTTGGTTCCA
TTCTACATGGCTAGCACTCGATTGGCCGTAAACGCCTCTGAATGTTTTCA
AGTGTCTTCACGCAGGCATTCACGATGGAACCTTTCGAGCCCTACTTATG
TTTTCCCCCTTATTCTGTTTGGCGTTGACGTTCTTCTGCTTCCACATTTC
AGCGCTGAGTTAGGGCGACTTCCATCGGTCAAAACTGCAGCATCGCTTGT
ACGTGGGTTATGCTACCAGAACAAAGATAGGCTTCTGGCGGGGATGATCA
TAGCAGGCTGGGACCCGGTAGAGGGAGGATCTGTGTACGAAATTCCATTG
GGGGGGACGGTGATAAAGCAAAAATTCGCCATTGGGGGTTCCGGCTCTAC
CTACATGTGAGCAGCTGAAAATCAATGTGACGTTTCCGTTCTTTCGTCTC
ATGTATCCTCTATCGCTGGAAACTCGCATGTTTGCCTGTTACCACGCTGA
AAATCCCGGCATCCTCTGACGTTCCCAGGCGTATGCCATCTTTAACCTTT
GTTATGCGTGTAATTGATCCAACAGCTACGGCCACGTGGATTCTTCTTTC
AAAGAAAATATGACCAAGGAAGAGGCGCAACAGTTTGTGCGTAAGGCTAT
TTCTCATGCCATGGCCCGCGACGGAAGCTCTGGAGGAGTGATCCGGATGG
TGGTGATCGACAAGACGGGGGTAAGCTCCTCTCCTGGTTTTAATATCATG
GTATCATTTGCTCTTCTTGTGTCCGGAACGATATACTAAATACAAGCTCG
TGTTCATCTATTTTAAGAACCTGTAATTAATCCAACTCGATTCCACTATG
TATACAGGGACAGCATCAACAACTCTCTACTCGTGGTCTCGAATGTAATG
TTTCTTATTCGCCCGCAGCACTTTTTCCCAAGCTTGAAAAACATGCCCAA
CATGACTCCTTCCACGCAGGTGTCTCGGGAGTACATTCCGGGGGATAAAC
TGCCGTTCGGGCCGTGATCGTTGCCCCGTCGGGTCAAAACCTGTCGCCCT
CGTGTGGAAGACAGCCGAAACAAGCAAGAGCTGCCCATCTTACTTAGTAA
CGGTTGAGTTGTTCCCTTGCCAACAAGAGTTGCTGTTGCGTAGGCAGGGG
ACGGTTGTAGGGAAGTTGGGGTTTCACTTTGCTGTGCCGTATGGTGCATA
GCTGCGTCCATAAGTATTTCTGCAGAGACAGTCCGCTCGAGAAATAAAAA
AACATTTTTCTGATTGCAGAGCTCCATATCCTGGGATAATGAAATTTAGC
TTTGTA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig102:825717..832672+ >mRNA_F-serratus_M_contig102.276.1 ID=mRNA_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=CDS|length=1314bp|location=Sequence derived from alignment at F-serratus_M_contig102:825717..832672+ (Fucus serratus male) ATGAATCTCGGGATGCAACAAGAATACCCAGGCCTGAGGGACGGCGAAAT ATCCTCTGGGATGAATCTCGGGATGCAACAAGAATACCCAGGCCTGAGGG ACGGCGAAATATCCTCTGGGACAACCATCATGGCGGTTACCTACGACGGC GGAGTCATTATGGGCGCAGACTCGCGGACATCGACAGGGACGTACGTGGC CAACCGCGTGAGCGACAAAATCACAGCATTGCATGATTACATCTATGCCT GTCGGTCGGGTTCTGCGGCTGATACCCAGGCCGTTTCGGACTACGTTCGC TACTTCCTAGCGTCTCACAGACAACCATCATGGCGGTTACCTACGACGGC GGAGTCATTATGGGCGCAGACTCGCGGACATCGACAGGGACGTACGTGGC CAACCGCGTGAGCGACAAAATCACAGCATTGCATGATTACATCTATGCCT GTCGGTCGGGTTCTGCGGCTGATACCCAGGCCGTTTCGGACTACGTTCGC TACTTCCTAGCGTCTCACAGCGCTGAGTTAGGGCGACTTCCATCGGTCAA AACTGCAGCATCGCTTGTACGTGGGTTATGCTACCAGAACAAAGATAGGC TTCTGGCGGGGATGATCATAGCAGGCTGGGACCCGGTAGAGGGAGGATCT GTGTACGAAATTCCATTGGGGGGGACGGTGATAAAGCAAAAATTCGCCAT TGGGGGTTCCGGCTCTACCTACATCGCTGAGTTAGGGCGACTTCCATCGG TCAAAACTGCAGCATCGCTTGTACGTGGGTTATGCTACCAGAACAAAGAT AGGCTTCTGGCGGGGATGATCATAGCAGGCTGGGACCCGGTAGAGGGAGG ATCTGTGTACGAAATTCCATTGGGGGGGACGGTGATAAAGCAAAAATTCG CCATTGGGGGTTCCGGCTCTACCTACATCTACGGCCACGTGGATTCTTCT TTCAAAGAAAATATGACCAAGGAAGAGGCGCAACAGTTTGTGCGTAAGGC TATTTCTCATGCCATGGCCCGCGACGGAAGCTCTGGAGGAGTGATCCGGA TGGTGGTGATCGACAAGACGGGGCTACGGCCACGTGGATTCTTCTTTCAA AGAAAATATGACCAAGGAAGAGGCGCAACAGTTTGTGCGTAAGGCTATTT CTCATGCCATGGCCCGCGACGGAAGCTCTGGAGGAGTGATCCGGATGGTG GTGATCGACAAGACGGGGGTGTCTCGGGAGTACATTCCGGGGGATAAACT GCCGTTCGGGCCGTGAGTGTCTCGGGAGTACATTCCGGGGGATAAACTGC CGTTCGGGCCGTGA back to top
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