mRNA_F-serratus_M_contig102.276.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S2V2Y9_9STRA (Proteasome endopeptidase complex n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Y9_9STRA) HSP 1 Score: 298 bits (763), Expect = 2.160e-97 Identity = 142/207 (68.60%), Postives = 174/207 (84.06%), Query Frame = 1 Query: 181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 L+ GE+S+GTTIMA Y+GGV++GADSRTSTGTYVANR S+K+T L D I+ CRSGSAADT+AV+DYV+YFL SHS E+G P V++AA LVR LCY+NKD L+AGMII GWDPV+GG VY +PLGGT+++Q AIGGSGSTYIYGHVD++++ M+KEE FV KAISHAMARDGSSGGVIR+V ID G+ ++Y GDKLP+GP Sbjct: 40 LKPGEVSTGTTIMACEYEGGVVVGADSRTSTGTYVANRASNKVTYLADNIFGCRSGSAADTEAVTDYVKYFLESHSTEIGGPPRVRSAAHLVRKLCYENKDALMAGMIIGGWDPVDGGQVYSVPLGGTLMRQPVAIGGSGSTYIYGHVDAAYRPGMSKEECHAFVAKAISHAMARDGSSGGVIRLVSIDANGIEKQYFAGDKLPYGP 246
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S4NH30_9STRA (Proteasome subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NH30_9STRA) HSP 1 Score: 295 bits (755), Expect = 2.410e-96 Identity = 148/219 (67.58%), Postives = 180/219 (82.19%), Query Frame = 1 Query: 148 MNLGMQQEYP-GLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 MN + P L+ GE+S+GTTIMAV +DGGVIMGADSRTSTGTY+A R+SDKIT LHD I+ACRSGSAADTQA+SDYVR++L + E GR P+VK AA+L+R L Y+NKD L+AG+II GWDPVEGGSVY I LGGT IK FA+GGSGSTYIYG VDS F+E M+KEEA++ V+K+ISHAMARDGSSGG+IR VV+ + +E+IPG+KLP+GP Sbjct: 17 MNSRSSDDNPYNLKKGEVSTGTTIMAVPFDGGVIMGADSRTSTGTYIAVRISDKITQLHDRIWACRSGSAADTQALSDYVRHYLGQLAVETGRAPTVKIAANLMRKLIYENKDNLMAGVIIGGWDPVEGGSVYNIALGGTCIKMPFALGGSGSTYIYGLVDSKFREGMSKEEAEELVKKSISHAMARDGSSGGIIRTVVVTEEKNVKEFIPGNKLPYGP 235
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S3PZM5_9STRA (Proteasome subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZM5_9STRA) HSP 1 Score: 293 bits (750), Expect = 1.640e-95 Identity = 146/226 (64.60%), Postives = 178/226 (78.76%), Query Frame = 1 Query: 124 SYQDIPRKMNLGMQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 SYQ + G E L+ GE+SSGTTIMA+ ++ GV++GADSR STGTYVANRVSDK+ LHD I+ CRSGSAADTQA++DYVR+FL + E GR P+VKTAA ++R LCY+NKD L+AG+I+ GWDPVE GSVY IPLGGT IK FAIGGSGSTYIYG VDS FKE MT+ EA V+K+ISHAMARDGSSGG+IR VV+ + G +REY+ G++LP+GP Sbjct: 12 SYQVQTPYTHDGKSAETRNLKPGELSSGTTIMAIPFENGVVLGADSRVSTGTYVANRVSDKVAQLHDRIWCCRSGSAADTQALTDYVRHFLGQLAIETGRAPTVKTAAHIMRRLCYENKDNLMAGVIVGGWDPVEKGSVYNIPLGGTCIKMPFAIGGSGSTYIYGLVDSQFKEGMTEIEATNLVKKSISHAMARDGSSGGIIRTVVVKQDGNTREYVAGNELPYGP 237
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A662XK04_9STRA (Proteasome subunit beta n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XK04_9STRA) HSP 1 Score: 291 bits (746), Expect = 7.550e-95 Identity = 139/205 (67.80%), Postives = 176/205 (85.85%), Query Frame = 1 Query: 181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795 L+ GEI +GT+I+AV + GGV++GADSRTSTGTY+ANRVSDK+T LHD ++ CRSGSAADTQA+SDYVRYFL+SH+ +LGR P V TAA+L R LCY NKDRLLAG+I+AGWD V+GG V+ IP+GG +++Q FAIGGSGSTYIYG VD+ ++ +MTKEE Q+FV+KA+SHAMARDGSSGGVIR V I ++ V R++I G++LPF Sbjct: 38 LKRGEIDAGTSIIAVKFKGGVVLGADSRTSTGTYIANRVSDKLTPLHDRVFCCRSGSAADTQALSDYVRYFLSSHAVDLGRPPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDSVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDAEYRPDMTKEECQRFVKKALSHAMARDGSSGGVIRTVTITESEVVRDFISGEQLPF 242
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S2KBL3_9STRA (Proteasome subunit beta n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KBL3_9STRA) HSP 1 Score: 290 bits (741), Expect = 1.660e-94 Identity = 140/207 (67.63%), Postives = 172/207 (83.09%), Query Frame = 1 Query: 181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 L+ E+S+GTTIMAV + GV++GADSR STGTYVANRVSDKI ALHD I+ CRSGSAADTQA++DYVR++LA H+ E GRLP VKTAA L+R L Y+NKD LLAG+I+ GWDPV+GGSVY IPLGG IK +AIGGSGST+IYG VD+++KE+MTK+E FV+K +SHAMARDGSSGG+IR VV + G +Y+PGD+LP+GP Sbjct: 10 LKPNEVSTGTTIMAVPFKDGVVLGADSRVSTGTYVANRVSDKIAALHDRIWCCRSGSAADTQALTDYVRHYLAQHAIETGRLPMVKTAAHLMRKLAYENKDNLLAGVIVGGWDPVDGGSVYNIPLGGACIKMPYAIGGSGSTFIYGLVDAAYKEDMTKDETLGFVKKCVSHAMARDGSSGGIIRTVVCTEGGNELDYVPGDQLPYGP 216
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S2W523_9STRA (Proteasome subunit beta n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W523_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.940e-94 Identity = 144/241 (59.75%), Postives = 188/241 (78.01%), Query Frame = 1 Query: 79 LSCVDTSQRLKILRVSYQDIPRKMNLGMQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 LS + Q+ ++ +V YQ + G E L+ GE+S+GTTIMA+++ GGV++GADSR STGTYVANR SDK+ LH+ I+ CRSGSAADTQA++DYVR++L+ + E GRLP+VK AA L+R LCY+NKD L+AG+I+ GWDPV+GGSVY IPLGG+ IK FA+GGSGSTYIYG VDS+++E MT+E+A V K+ISHAMARDGSSGG+IR VV+ ++G R YI GD+LP+GP Sbjct: 4 LSMYGSQQQPQMSKVGYQ------HDGKSAETRHLKPGELSTGTTIMAISFKGGVVLGADSRVSTGTYVANRASDKVAQLHERIWCCRSGSAADTQALTDYVRHYLSQLAVENGRLPTVKVAAHLMRKLCYENKDTLMAGVIVGGWDPVDGGSVYNIPLGGSCIKMPFALGGSGSTYIYGLVDSTYQEEMTEEDATALVTKSISHAMARDGSSGGIIRTVVVTESGNERNYIAGDRLPYGP 238
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A812V0V3_SYMMI (Proteasome subunit beta n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V0V3_SYMMI) HSP 1 Score: 288 bits (736), Expect = 4.630e-94 Identity = 134/193 (69.43%), Postives = 169/193 (87.56%), Query Frame = 1 Query: 217 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795 MAV +DGGV++GADSRTSTG+YVANRVSDKI +HDYI+ACRSGSAADTQAV DYV+Y+L +HS EL RLP V+TAA+L+R +CY NKD ++AG+I GWDP EGG VYE+PLGGT+++QKFA+GGSGS+YIYG VDS+F+E MTKEE + FV+K+I+HAM+RDGSSGGV+R+ VID+ GV RE + G++LPF Sbjct: 1 MAVEFDGGVVLGADSRTSTGSYVANRVSDKIVPIHDYIWACRSGSAADTQAVVDYVKYYLDAHSGELNRLPRVQTAANLMRLICYNNKDNMMAGLICGGWDPYEGGQVYEVPLGGTLVRQKFAVGGSGSSYIYGLVDSTFREGMTKEECKDFVKKSIAHAMSRDGSSGGVVRLTVIDRGGVERECVLGNELPF 193
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A6G0XTI5_9STRA (Proteasome subunit beta n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTI5_9STRA) HSP 1 Score: 288 bits (738), Expect = 7.630e-94 Identity = 141/207 (68.12%), Postives = 178/207 (85.99%), Query Frame = 1 Query: 181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAEL--GRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795 L+ GE+SSGTTI+AV Y GVI+GADSRTSTGTYVANRVSDK+T++HD IY CRSGSAADTQA+S+YVRYF+ASH+AE+ LP V TAA+L R LCY+NKDRL+AG+I+AG+D ++GG VY IP+GG +++Q+FAIGGSGSTYIYG VDS ++ MT++EA+ FV+KA+SHAMARDGSSGGVIR V I+K GV R ++ G++LPF Sbjct: 22 LKAGEVSSGTTIIAVKYKDGVILGADSRTSTGTYVANRVSDKLTSIHDRIYCCRSGSAADTQALSEYVRYFMASHAAEIEGDALPKVHTAANLFRKLCYENKDRLMAGIIVAGYDDIKGGQVYSIPIGGAMVEQEFAIGGSGSTYIYGFVDSHWRSGMTRDEAEAFVQKALSHAMARDGSSGGVIRTVAINKEGVHRGFVAGNQLPF 228
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: M4C0F8_HYAAE (Proteasome subunit beta n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0F8_HYAAE) HSP 1 Score: 288 bits (736), Expect = 1.020e-93 Identity = 137/205 (66.83%), Postives = 172/205 (83.90%), Query Frame = 1 Query: 181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795 L+ GE+ +GT+I+AV + GGV++GADSRTSTGTYVANRVSDK+T LHD ++ CRSGSAADTQA+SDYVRY+L+SHS ELGRLP+V AA+L+R LCY NKDRL+AGMI+AGWD V+GG V+ IP+GG +++Q AIGGSGSTYIYG VD+ ++ +MTKEE Q FV+K ++HAMARDGSSGGVIR V I + V R++ GD LPF Sbjct: 12 LKPGEVDAGTSIIAVRFQGGVVLGADSRTSTGTYVANRVSDKLTPLHDRLFCCRSGSAADTQALSDYVRYYLSSHSVELGRLPTVHAAATLLRSLCYHNKDRLVAGMIVAGWDKVKGGQVFSIPIGGNMVEQNVAIGGSGSTYIYGLVDAEYRPDMTKEECQAFVKKMLAHAMARDGSSGGVIRTVTITENEVVRDFTSGDDLPF 216
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S2MG03_9EUKA (Proteasome subunit beta n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MG03_9EUKA) HSP 1 Score: 288 bits (738), Expect = 1.720e-93 Identity = 136/207 (65.70%), Postives = 168/207 (81.16%), Query Frame = 1 Query: 181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801 L+ GE+ GT+IMAV YDGGV++GADSRTSTG Y++NRVSDK+TA+ + IY CRSGSAADTQA+SDYV YFL H ELG P V TAA+L R LCY NK+ L+AG+I+AGWDP++GG VYE PLGG ++Q FAIGGSGSTYIYG D+ +K M + ++FVRKA+SHAMARDGSSGGVIR V ID++G R+++PG+KLPFGP Sbjct: 47 LKKGEVDLGTSIMAVRYDGGVVIGADSRTSTGVYISNRVSDKVTAVDERIYVCRSGSAADTQAISDYVTYFLDQHKMELGNAPKVSTAANLFRELCYHNKNNLMAGIIVAGWDPIKGGQVYECPLGGAQVEQDFAIGGSGSTYIYGFCDAYYKPGMNSVQCEEFVRKALSHAMARDGSSGGVIRTVKIDESGAERKFVPGNKLPFGP 253 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig102.276.1 >prot_F-serratus_M_contig102.276.1 ID=prot_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=polypeptide|length=219bp MNLGMQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVback to top mRNA from alignment at F-serratus_M_contig102:825717..832672+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig102.276.1 ID=mRNA_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=mRNA|length=6956bp|location=Sequence derived from alignment at F-serratus_M_contig102:825717..832672+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig102:825717..832672+ >mRNA_F-serratus_M_contig102.276.1 ID=mRNA_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=CDS|length=1314bp|location=Sequence derived from alignment at F-serratus_M_contig102:825717..832672+ (Fucus serratus male)back to top |