mRNA_F-serratus_M_contig102.276.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig102.276.1
Unique NamemRNA_F-serratus_M_contig102.276.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S2V2Y9_9STRA (Proteasome endopeptidase complex n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Y9_9STRA)

HSP 1 Score: 298 bits (763), Expect = 2.160e-97
Identity = 142/207 (68.60%), Postives = 174/207 (84.06%), Query Frame = 1 
Query:  181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801
            L+ GE+S+GTTIMA  Y+GGV++GADSRTSTGTYVANR S+K+T L D I+ CRSGSAADT+AV+DYV+YFL SHS E+G  P V++AA LVR LCY+NKD L+AGMII GWDPV+GG VY +PLGGT+++Q  AIGGSGSTYIYGHVD++++  M+KEE   FV KAISHAMARDGSSGGVIR+V ID  G+ ++Y  GDKLP+GP
Sbjct:   40 LKPGEVSTGTTIMACEYEGGVVVGADSRTSTGTYVANRASNKVTYLADNIFGCRSGSAADTEAVTDYVKYFLESHSTEIGGPPRVRSAAHLVRKLCYENKDALMAGMIIGGWDPVDGGQVYSVPLGGTLMRQPVAIGGSGSTYIYGHVDAAYRPGMSKEECHAFVAKAISHAMARDGSSGGVIRLVSIDANGIEKQYFAGDKLPYGP 246
[Close]
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S4NH30_9STRA (Proteasome subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NH30_9STRA)

HSP 1 Score: 295 bits (755), Expect = 2.410e-96
Identity = 148/219 (67.58%), Postives = 180/219 (82.19%), Query Frame = 1 
Query:  148 MNLGMQQEYP-GLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801
            MN     + P  L+ GE+S+GTTIMAV +DGGVIMGADSRTSTGTY+A R+SDKIT LHD I+ACRSGSAADTQA+SDYVR++L   + E GR P+VK AA+L+R L Y+NKD L+AG+II GWDPVEGGSVY I LGGT IK  FA+GGSGSTYIYG VDS F+E M+KEEA++ V+K+ISHAMARDGSSGG+IR VV+ +    +E+IPG+KLP+GP
Sbjct:   17 MNSRSSDDNPYNLKKGEVSTGTTIMAVPFDGGVIMGADSRTSTGTYIAVRISDKITQLHDRIWACRSGSAADTQALSDYVRHYLGQLAVETGRAPTVKIAANLMRKLIYENKDNLMAGVIIGGWDPVEGGSVYNIALGGTCIKMPFALGGSGSTYIYGLVDSKFREGMSKEEAEELVKKSISHAMARDGSSGGIIRTVVVTEEKNVKEFIPGNKLPYGP 235
[Close]
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S3PZM5_9STRA (Proteasome subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZM5_9STRA)

HSP 1 Score: 293 bits (750), Expect = 1.640e-95
Identity = 146/226 (64.60%), Postives = 178/226 (78.76%), Query Frame = 1 
Query:  124 SYQDIPRKMNLGMQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801
            SYQ      + G   E   L+ GE+SSGTTIMA+ ++ GV++GADSR STGTYVANRVSDK+  LHD I+ CRSGSAADTQA++DYVR+FL   + E GR P+VKTAA ++R LCY+NKD L+AG+I+ GWDPVE GSVY IPLGGT IK  FAIGGSGSTYIYG VDS FKE MT+ EA   V+K+ISHAMARDGSSGG+IR VV+ + G +REY+ G++LP+GP
Sbjct:   12 SYQVQTPYTHDGKSAETRNLKPGELSSGTTIMAIPFENGVVLGADSRVSTGTYVANRVSDKVAQLHDRIWCCRSGSAADTQALTDYVRHFLGQLAIETGRAPTVKTAAHIMRRLCYENKDNLMAGVIVGGWDPVEKGSVYNIPLGGTCIKMPFAIGGSGSTYIYGLVDSQFKEGMTEIEATNLVKKSISHAMARDGSSGGIIRTVVVKQDGNTREYVAGNELPYGP 237
[Close]
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A662XK04_9STRA (Proteasome subunit beta n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XK04_9STRA)

HSP 1 Score: 291 bits (746), Expect = 7.550e-95
Identity = 139/205 (67.80%), Postives = 176/205 (85.85%), Query Frame = 1 
Query:  181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795
            L+ GEI +GT+I+AV + GGV++GADSRTSTGTY+ANRVSDK+T LHD ++ CRSGSAADTQA+SDYVRYFL+SH+ +LGR P V TAA+L R LCY NKDRLLAG+I+AGWD V+GG V+ IP+GG +++Q FAIGGSGSTYIYG VD+ ++ +MTKEE Q+FV+KA+SHAMARDGSSGGVIR V I ++ V R++I G++LPF
Sbjct:   38 LKRGEIDAGTSIIAVKFKGGVVLGADSRTSTGTYIANRVSDKLTPLHDRVFCCRSGSAADTQALSDYVRYFLSSHAVDLGRPPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDSVKGGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDAEYRPDMTKEECQRFVKKALSHAMARDGSSGGVIRTVTITESEVVRDFISGEQLPF 242
[Close]
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S2KBL3_9STRA (Proteasome subunit beta n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KBL3_9STRA)

HSP 1 Score: 290 bits (741), Expect = 1.660e-94
Identity = 140/207 (67.63%), Postives = 172/207 (83.09%), Query Frame = 1 
Query:  181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801
            L+  E+S+GTTIMAV +  GV++GADSR STGTYVANRVSDKI ALHD I+ CRSGSAADTQA++DYVR++LA H+ E GRLP VKTAA L+R L Y+NKD LLAG+I+ GWDPV+GGSVY IPLGG  IK  +AIGGSGST+IYG VD+++KE+MTK+E   FV+K +SHAMARDGSSGG+IR VV  + G   +Y+PGD+LP+GP
Sbjct:   10 LKPNEVSTGTTIMAVPFKDGVVLGADSRVSTGTYVANRVSDKIAALHDRIWCCRSGSAADTQALTDYVRHYLAQHAIETGRLPMVKTAAHLMRKLAYENKDNLLAGVIVGGWDPVDGGSVYNIPLGGACIKMPYAIGGSGSTFIYGLVDAAYKEDMTKDETLGFVKKCVSHAMARDGSSGGIIRTVVCTEGGNELDYVPGDQLPYGP 216
[Close]
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S2W523_9STRA (Proteasome subunit beta n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W523_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.940e-94
Identity = 144/241 (59.75%), Postives = 188/241 (78.01%), Query Frame = 1 
Query:   79 LSCVDTSQRLKILRVSYQDIPRKMNLGMQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801
            LS   + Q+ ++ +V YQ      + G   E   L+ GE+S+GTTIMA+++ GGV++GADSR STGTYVANR SDK+  LH+ I+ CRSGSAADTQA++DYVR++L+  + E GRLP+VK AA L+R LCY+NKD L+AG+I+ GWDPV+GGSVY IPLGG+ IK  FA+GGSGSTYIYG VDS+++E MT+E+A   V K+ISHAMARDGSSGG+IR VV+ ++G  R YI GD+LP+GP
Sbjct:    4 LSMYGSQQQPQMSKVGYQ------HDGKSAETRHLKPGELSTGTTIMAISFKGGVVLGADSRVSTGTYVANRASDKVAQLHERIWCCRSGSAADTQALTDYVRHYLSQLAVENGRLPTVKVAAHLMRKLCYENKDTLMAGVIVGGWDPVDGGSVYNIPLGGSCIKMPFALGGSGSTYIYGLVDSTYQEEMTEEDATALVTKSISHAMARDGSSGGIIRTVVVTESGNERNYIAGDRLPYGP 238
[Close]
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A812V0V3_SYMMI (Proteasome subunit beta n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V0V3_SYMMI)

HSP 1 Score: 288 bits (736), Expect = 4.630e-94
Identity = 134/193 (69.43%), Postives = 169/193 (87.56%), Query Frame = 1 
Query:  217 MAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795
            MAV +DGGV++GADSRTSTG+YVANRVSDKI  +HDYI+ACRSGSAADTQAV DYV+Y+L +HS EL RLP V+TAA+L+R +CY NKD ++AG+I  GWDP EGG VYE+PLGGT+++QKFA+GGSGS+YIYG VDS+F+E MTKEE + FV+K+I+HAM+RDGSSGGV+R+ VID+ GV RE + G++LPF
Sbjct:    1 MAVEFDGGVVLGADSRTSTGSYVANRVSDKIVPIHDYIWACRSGSAADTQAVVDYVKYYLDAHSGELNRLPRVQTAANLMRLICYNNKDNMMAGLICGGWDPYEGGQVYEVPLGGTLVRQKFAVGGSGSSYIYGLVDSTFREGMTKEECKDFVKKSIAHAMSRDGSSGGVVRLTVIDRGGVERECVLGNELPF 193
[Close]
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A6G0XTI5_9STRA (Proteasome subunit beta n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTI5_9STRA)

HSP 1 Score: 288 bits (738), Expect = 7.630e-94
Identity = 141/207 (68.12%), Postives = 178/207 (85.99%), Query Frame = 1 
Query:  181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAEL--GRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795
            L+ GE+SSGTTI+AV Y  GVI+GADSRTSTGTYVANRVSDK+T++HD IY CRSGSAADTQA+S+YVRYF+ASH+AE+    LP V TAA+L R LCY+NKDRL+AG+I+AG+D ++GG VY IP+GG +++Q+FAIGGSGSTYIYG VDS ++  MT++EA+ FV+KA+SHAMARDGSSGGVIR V I+K GV R ++ G++LPF
Sbjct:   22 LKAGEVSSGTTIIAVKYKDGVILGADSRTSTGTYVANRVSDKLTSIHDRIYCCRSGSAADTQALSEYVRYFMASHAAEIEGDALPKVHTAANLFRKLCYENKDRLMAGIIVAGYDDIKGGQVYSIPIGGAMVEQEFAIGGSGSTYIYGFVDSHWRSGMTRDEAEAFVQKALSHAMARDGSSGGVIRTVAINKEGVHRGFVAGNQLPF 228
[Close]
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: M4C0F8_HYAAE (Proteasome subunit beta n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0F8_HYAAE)

HSP 1 Score: 288 bits (736), Expect = 1.020e-93
Identity = 137/205 (66.83%), Postives = 172/205 (83.90%), Query Frame = 1 
Query:  181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPF 795
            L+ GE+ +GT+I+AV + GGV++GADSRTSTGTYVANRVSDK+T LHD ++ CRSGSAADTQA+SDYVRY+L+SHS ELGRLP+V  AA+L+R LCY NKDRL+AGMI+AGWD V+GG V+ IP+GG +++Q  AIGGSGSTYIYG VD+ ++ +MTKEE Q FV+K ++HAMARDGSSGGVIR V I +  V R++  GD LPF
Sbjct:   12 LKPGEVDAGTSIIAVRFQGGVVLGADSRTSTGTYVANRVSDKLTPLHDRLFCCRSGSAADTQALSDYVRYYLSSHSVELGRLPTVHAAATLLRSLCYHNKDRLVAGMIVAGWDKVKGGQVFSIPIGGNMVEQNVAIGGSGSTYIYGLVDAEYRPDMTKEECQAFVKKMLAHAMARDGSSGGVIRTVTITENEVVRDFTSGDDLPF 216
[Close]
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Match: A0A7S2MG03_9EUKA (Proteasome subunit beta n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MG03_9EUKA)

HSP 1 Score: 288 bits (738), Expect = 1.720e-93
Identity = 136/207 (65.70%), Postives = 168/207 (81.16%), Query Frame = 1 
Query:  181 LRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRVSDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAASLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGSGSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVIDKTGVSREYIPGDKLPFGP 801
            L+ GE+  GT+IMAV YDGGV++GADSRTSTG Y++NRVSDK+TA+ + IY CRSGSAADTQA+SDYV YFL  H  ELG  P V TAA+L R LCY NK+ L+AG+I+AGWDP++GG VYE PLGG  ++Q FAIGGSGSTYIYG  D+ +K  M   + ++FVRKA+SHAMARDGSSGGVIR V ID++G  R+++PG+KLPFGP
Sbjct:   47 LKKGEVDLGTSIMAVRYDGGVVIGADSRTSTGVYISNRVSDKVTAVDERIYVCRSGSAADTQAISDYVTYFLDQHKMELGNAPKVSTAANLFRELCYHNKNNLMAGIIVAGWDPIKGGQVYECPLGGAQVEQDFAIGGSGSTYIYGFCDAYYKPGMNSVQCEEFVRKALSHAMARDGSSGGVIRTVKIDESGAERKFVPGNKLPFGP 253
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2V2Y9_9STRA2.160e-9768.60Proteasome endopeptidase complex n=1 Tax=Fibrocaps... [more]
A0A7S4NH30_9STRA2.410e-9667.58Proteasome subunit beta n=1 Tax=Odontella aurita T... [more]
A0A7S3PZM5_9STRA1.640e-9564.60Proteasome subunit beta n=1 Tax=Chaetoceros debili... [more]
A0A662XK04_9STRA7.550e-9567.80Proteasome subunit beta n=3 Tax=Peronosporaceae Ta... [more]
A0A7S2KBL3_9STRA1.660e-9467.63Proteasome subunit beta n=1 Tax=Leptocylindrus dan... [more]
A0A7S2W523_9STRA1.940e-9459.75Proteasome subunit beta n=1 Tax=Eucampia antarctic... [more]
A0A812V0V3_SYMMI4.630e-9469.43Proteasome subunit beta n=1 Tax=Symbiodinium micro... [more]
A0A6G0XTI5_9STRA7.630e-9468.12Proteasome subunit beta n=2 Tax=Aphanomyces euteic... [more]
M4C0F8_HYAAE1.020e-9366.83Proteasome subunit beta n=1 Tax=Hyaloperonospora a... [more]
A0A7S2MG03_9EUKA1.720e-9365.70Proteasome subunit beta n=1 Tax=Haptolina brevifil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig102contigF-serratus_M_contig102:825717..832672 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score396.7
Seed ortholog evalue6.8e-108
Seed eggNOG ortholog2880.D7FQT3
Preferred namePBA1
KEGG koko:K02738,ko:K11507
KEGG Pathwayko03050,map03050
KEGG ModuleM00340
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0019774,GO:0032991,GO:0044424,GO:0044464,GO:1902494,GO:1905368,GO:1905369
EggNOG free text desc.Proteasome subunit beta
EggNOG OGsKOG0174@1,KOG0174@2759
Ec32 ortholog descriptionPeptidase T1A, proteasome beta-subunit
Ec32 orthologEc-16_000630.1
EC3.4.25.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03036,ko03051
Exons5
Model size1093
Cds size657
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928822.661134-UTR-F-serratus_M_contig102:825716..8258631622928822.661134-UTR-F-serratus_M_contig102:825716..825863Fucus serratus maleUTRF-serratus_M_contig102 825717..825863 +
1690962588.5495963-UTR-F-serratus_M_contig102:825716..8258631690962588.5495963-UTR-F-serratus_M_contig102:825716..825863Fucus serratus maleUTRF-serratus_M_contig102 825717..825863 +
1622928822.751902-UTR-F-serratus_M_contig102:832383..8326721622928822.751902-UTR-F-serratus_M_contig102:832383..832672Fucus serratus maleUTRF-serratus_M_contig102 832384..832672 +
1690962588.611693-UTR-F-serratus_M_contig102:832383..8326721690962588.611693-UTR-F-serratus_M_contig102:832383..832672Fucus serratus maleUTRF-serratus_M_contig102 832384..832672 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928822.679551-CDS-F-serratus_M_contig102:825863..8259231622928822.679551-CDS-F-serratus_M_contig102:825863..825923Fucus serratus maleCDSF-serratus_M_contig102 825864..825923 +
1690962588.5628638-CDS-F-serratus_M_contig102:825863..8259231690962588.5628638-CDS-F-serratus_M_contig102:825863..825923Fucus serratus maleCDSF-serratus_M_contig102 825864..825923 +
1622928822.6938827-CDS-F-serratus_M_contig102:831137..8313371622928822.6938827-CDS-F-serratus_M_contig102:831137..831337Fucus serratus maleCDSF-serratus_M_contig102 831138..831337 +
1690962588.5726006-CDS-F-serratus_M_contig102:831137..8313371690962588.5726006-CDS-F-serratus_M_contig102:831137..831337Fucus serratus maleCDSF-serratus_M_contig102 831138..831337 +
1622928822.7116501-CDS-F-serratus_M_contig102:831568..8317721622928822.7116501-CDS-F-serratus_M_contig102:831568..831772Fucus serratus maleCDSF-serratus_M_contig102 831569..831772 +
1690962588.5828567-CDS-F-serratus_M_contig102:831568..8317721690962588.5828567-CDS-F-serratus_M_contig102:831568..831772Fucus serratus maleCDSF-serratus_M_contig102 831569..831772 +
1622928822.726298-CDS-F-serratus_M_contig102:831941..8320861622928822.726298-CDS-F-serratus_M_contig102:831941..832086Fucus serratus maleCDSF-serratus_M_contig102 831942..832086 +
1690962588.5963316-CDS-F-serratus_M_contig102:831941..8320861690962588.5963316-CDS-F-serratus_M_contig102:831941..832086Fucus serratus maleCDSF-serratus_M_contig102 831942..832086 +
1622928822.7385926-CDS-F-serratus_M_contig102:832335..8323831622928822.7385926-CDS-F-serratus_M_contig102:832335..832383Fucus serratus maleCDSF-serratus_M_contig102 832336..832383 +
1690962588.604346-CDS-F-serratus_M_contig102:832335..8323831690962588.604346-CDS-F-serratus_M_contig102:832335..832383Fucus serratus maleCDSF-serratus_M_contig102 832336..832383 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig102.276.1prot_F-serratus_M_contig102.276.1Fucus serratus malepolypeptideF-serratus_M_contig102 825864..832383 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig102.276.1

>prot_F-serratus_M_contig102.276.1 ID=prot_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=polypeptide|length=219bp
MNLGMQQEYPGLRDGEISSGTTIMAVTYDGGVIMGADSRTSTGTYVANRV
SDKITALHDYIYACRSGSAADTQAVSDYVRYFLASHSAELGRLPSVKTAA
SLVRGLCYQNKDRLLAGMIIAGWDPVEGGSVYEIPLGGTVIKQKFAIGGS
GSTYIYGHVDSSFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVVID
KTGVSREYIPGDKLPFGP*
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mRNA from alignment at F-serratus_M_contig102:825717..832672+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig102.276.1 ID=mRNA_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=mRNA|length=6956bp|location=Sequence derived from alignment at F-serratus_M_contig102:825717..832672+ (Fucus serratus male)
CCGCATTTGAGATACTCTTGACGTGCTTACTACTGCACTTTTTTCTGCTC
CACCAGCTGAAAGTTTGTGAATATTGTGTTGTCCTGTGTAGACACCTCAC
AGCGCTTGAAAATTTTGCGTGTATCATATCAGGATATACCGCGGAAGATG
AATCTCGGGATGCAACAAGAATACCCAGGCCTGAGGGACGGCGAAATATC
CTCTGGGGTGAGTTTCTCTTATCCCACCCGGTTGTGGCTGCAAAGGCAGA
TCATTTACGTAATACTCCCTCCACCAGCATGTTGTAGCAATAACGGACGA
ACTACAAATGCAGTGAGATTACTTTCCTTCGTACACAACCACTGAACAAA
TTTTGAGGCGGTGAACACAAACAAGGATTACGAACGAGACTTTTCTTGAA
CGTTGTTCCAGAGCATTTATAAATACATTTCAGAGGTACTCGTACTTGTT
AAAATATTACAGCTGTCTGGTTCTTCTACAGAATGCAAAGCAAGTTTCGC
TCAACTTTTCTCTCGATACTTTACGGTTTGTTTTGTTCGCACTTGTTACC
ATATCTTATTGGGCTGGAAATTCAAAATTCTTGAAATCTGAAATCGAGTA
GATTTCAGATTTCGGGCAAACTTCTGCATCCCAGAATAAAATTTTCTTGT
GGGACTCTGTGTTTTGTTTTGTGTGTGTTGGTTTTCTTCCCATCCATTCT
GGACATCAAGTTTGTTGGACGTACCAGCCGGGGTCACACAGGAGGAAGGT
CACACGGGATTTTCCATCCACCTTCCTTCTGCGGTGCGTGCCTTAATTTT
TATCGCGAGAAGAATTCAGCCATTCCTTTCCCTCGTCGACCGTGAAGTCG
AATTTTGTGTACAAACGAATTAATCGTTCTCCACGCGTTGGGCATTTTTA
TTTTGGTTTTTAGTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAAC
TCACGTCCCAACGTGTCAGAAGGTTACGAGGTACCTACTGAGCTACCGGG
GCGACCGGCTCTGTTGTTGTTTATCTCACATTAACTGATCCGCTACGAAT
CCAGCCGTGGTCACAAGATAGACGGGACCAAACCAGATCAAAAACCTGTA
ATACTTTCCGAGATAAGCAGGGAAAAAATATATACCTGGTAAAAGACAAC
GGACAAGAAACTGGAAACTGAAAATTAAACAAAGTCATGGAGGCGTACTC
GATACAAAATGATTGGTTGAAGAAATAGATAGACGAGACGACTTCGGGCT
ACCCAGTGAGGGGCATGCGTAAGACATATGTTTGTGTTCACACAGCCACC
ACAGCGGTGAAACTTCCAACATGCTTCCGGCAGGGACAAGCGATGGTTTG
TGCTGCTCTCTTATAATAGTCTAATGCTCTCTTCGACAAAGCCCGGAAAA
AAAAGTATAGGTTGCTCTCCAATTTCAGTACTACAATTTGTTACGTAATA
CCGGTATGTGTAATACATGCACAGCACCGAGTGCTTTACTGGGAAACGTG
GCCTCGACGGAAACGATATGTATAACGAGTAGCTGCTGTGTGAGTTGCAG
CAACAGTTTAGTTGGTGGTGGACCCACTTCAAGCCTACTAATTCAATCTC
ACCCCGCGGCCCGGCGCGCTTTTGTTTGGTAAGGTGTGCATTCTCTTGAG
TAGAGGTATTTATAATTCTGTGGGTCATGTTTGTACCAGCGTGCGAGGTC
GCAAGAGTACAAACAAATGACTGCATCGTGGCAGCGAGAGCGATTCCTGC
TGCCACCACCCCGATCGTTTCCCCCAGTAACCTTCATCACCAAAGGCTTG
AGTTTGGCTCATAATCGCTCGGGCTGCTATGTCCCTAATCTCTGTGCTAC
GCGTCGGCGTGTAACGACTGGTTGCTGCTTCTCTCTTTCTGCTCTCTTCA
GCACAGACTAAAAACTATTGAACTATAGTACTACGTACATATACTACAGT
ACAGTTAGTTTATCTATGACTCTGGTACTGGGAAACGTGGTCTCGGCGGG
GAAAATCTGTTGTGCGAGTAGCTGCTCTGTGAGTCGCAGCAGCAGTTTAG
TTGGAGGAAGACCTACGTGAAGCCTACTCCTTGGATCTCTTCTTGCGGCC
GGACGCGTCTTGGTATATCGTTAGTTGTGCATTTTCTTGAGGAGAACTGT
TCAGAACTATATGGGCCCTGTTTGTACGAACGTGCAAGGTCTCTGGAGTA
TAAACAAATAACCGCATCGTGGCAGCGACAGCGATACCTGCTGCCAGTGC
GCCAGCGTTTCCATCAACAATTTTCATCCCTGAAAGCTTGAGTTTGACCC
ACAATCACTCGGGCTGCTGGCGCTACTCTCCGTGCTACGAGTCGGCGTGT
CATCCGGCCATAGGTTTGCTCCATTACAACAAGTATCAAAAGCCACAAAT
AAATACCCTGGGCATAGCCAAAAGCCTGACCATGTAACACAAAAACGATT
TTCCAGAGAGCCGATCTCTCTTGAAAATGGGTGCTCATTTTCAAGAATAT
GTCGACCTCGCCCGATTCTTGAAAATCAGATTCTTGAGAATGGGCGGATT
TCAAGTCCATAAGATGGAATTTTCTGTTGAAATCCAGAAATGGACCGATT
CCAGATTTCAAGAATCCTGGATTTCGGTCCCATTAAGACTTGGCCTTACC
GCCCGTGTGGGATTTCGTGAGTTCGACTGGTGCCCGGGTGATTGCTTTTA
TTCTGATTTCCCTAGCGGAAAGCGTGAGAAAGTGAGTAAGTAAAATTCAT
CCATCGATTCATGCGGTGTTATGGGTGCTGAACGTGCATCGCGATACAAA
ATCGTAGGCGTGAACCGGGGAGAGATGACAAGATCCTTGGTGACCACAGG
CAGGATAACGTTGCTATGGTACCAAGAGGTGGAATTTGTAACCAATAATA
CCGCCGGTACTTTCAACATGCCCACCTCATACCAATAGTGGGTGTGGGAA
AGAGAGGCGAATATTAGTTGGTCTATGGTGACCTGTCAAGGCAGCACTCG
TTCGGAGGTTTACTGGCCCCGTGCCGGCGGAGAACGCCATTGGTACGCAT
TGCGTGGACCCGATAAACTCGGGACTGACCCGATGGCGTATGGCGGTTTA
AAATAAATAAATGGACGCCGCCGCGAAACTCGGGAGGAATCCCGTAAGTA
AGCACCATATTCAGCCCGAGTATGGAGATGAGCAGGCTGACGCGGGACGG
GACTGCCGAACCCGTCTCGTGAGACCAAATTATCAGGCACGAACGCGGAC
AGGAAAATACTTCGTATTCATTTTTCCTGTTCAGCTGACCACGTGCAGGA
CGGCAACCTTCTCCGCTTGATCCATACTCTTGCTATATGTGTGACCATAT
AATAGTACGTTGATGCATATCGGTTGTGATAAGACCCAAACAAACAATGT
CTGTTTTGTCTGTGCAGCATATGATGCCACCTAAGCGTTTTGACATTTTT
CGCCCTGTGTGGGATGCTCAGAACGTTTAGATCGTTCATTTAAAATAAAA
TAAAATAACTGCACCAGTAGTGGGTATGAGAATAGAGGAGAGTCCAGATT
GGTCCATAGGAATACTGTACTTGAATAGGCAGCACCTGTTACTTGAACTA
TCTTGAGAAAAACTGGCCTGGCCCCGTGCCCGCGGGCTCTCGGCGGTGAC
CGCCATTGATACGCAAATATCGACCAAAGAGGCTCCGGGAATAACCCGAT
CGCGGTTGACGGCATAGATGGACGCCGTCGTGGAAATCGGCATGAATCCC
GTGAATATGCATCAGATTCGGCCTTAGTGTGGAAAATAAGCGGGCTGACG
CGGGATGGGACAGCCGAACCTAACTCGCGAGACCAAATTGTCACGCGTGA
ACGGGGACAGGGGAACATTGTTTTCCCTTTTCAGCTGAACACGAGCAGGA
TTGACAACCATATCCTCTGATACCTTGTCTGCTGAATGCGATGACCGTAC
ATTCTGCTCTATGTAGATCTTACTTGCACTGGTATTACAGATTCGAGTTA
TAATATTAATAGTCACCAATATTCGTTCGTATGCGCGATTCTGTTTGTAT
CGCACATTTAACCCAGTTTGCCTAATTAATAAATGTGTAGACCATACACA
CGTGCAGGTTTGGCAACCTTACCCGGTTGATCCATACTCTTGCTACATGT
GTGTGACCATACATATACACTGTACATATAAAAGGTGCGGAAAATAGAAA
ATAGAGGTACATGTCAATTGGTCCGTGGGGTTACCTATCTAAATAAGCAG
CACTCGTTACTCGAACAACCTTTGGGATACTGGCCATGTGCCGGCGGATA
CTCTGAAGTGAACGCCATCGGAACGCAGTTGCGTGACCCGATAAATTCGG
CACTGACCCGATGGCGTTTGGTGTTGGACGGTTTAGTCTAGATGGACGCC
GTCGCGGAAGGCGGGAGGAAGGAGAGGAGCCCTTTAGTAAGCACCAGGTT
TTCAGCCTGAGTGTGGAGAGTGAGTGTGGGCTGACGCGGGACGGGATGGC
CAAACCTGTCTCGCGTGGCCAAATTCTCAGGCGTGAACAGAGACAGGGAA
AAATCGTTCTCCCTGTTAAGACTACGAACAGGATTGGCAACCATACCTGG
TTGATACCCACCTTGCTAAAAGTGATCAACCGTTTCCCAGAAATGTTTAC
CTCTGTGGTGCCGGCAGATGCAACGATTGCTGCACCACGCCAACACTCTC
TAGACTTGAAATAGCACAAAGCCTTCACCTGGTGGTGTCGTATCGTGAGG
AGTTTTTCACGTGAGCTCTGGGCCTTAAGGCAGCGACCGCACTAAATTGT
TCACGACTGTCGAGGAGCAATCGCGAGAGAAAATAATTCGGGACTACCCG
TAGGTCCCGTCCCGTCGCAGAACTCACCAAAGAAGTGCTTTGGCGAGGTA
CTATTAGCGATTATGCATCTTGGTTCTGTATATTTTTTTATATATCGCTC
GGCCGACGTCTGACTTTTTTCGCAGTTTTCTATCGCCGACGACCACGACA
TAACTCGGTTGCCTTTTCAAAAACCATGCGAACATTACAGTTGGTCTGTT
GACATTAAAGTCGCACATAAAAGAGTCTTCGGAGGAAGATTATTTGCCAT
TTATCTGTGCTCGCCTGTCAAGATGGTTTATTTCACTACACAGAGGGAGG
TTTTTGACTTTCCAATGAGGGATCTCCAATTTTCTGACTGTTCTCGTCCA
GGTTGAACCCATGCTAAGAGTCGCCCTTGCCTCCAACTCTTGGGACCCAT
GCTAAGTGTCGCCCTTGCCTCCAACTCTTGGGAGCCATGCTTAGAGTAGT
ACAAACGCAGGAATCTCGTGTCACCCCGTATTTCCCCGTGATGAACGCCG
ACCTCCGTGCTTCTGATTTTGGAACAATCATCCGCACGCTTCACGCTTCG
TTGCTGACCTCGTGTTCCCAGACAACCATCATGGCGGTTACCTACGACGG
CGGAGTCATTATGGGCGCAGACTCGCGGACATCGACAGGGACGTACGTGG
CCAACCGCGTGAGCGACAAAATCACAGCATTGCATGATTACATCTATGCC
TGTCGGTCGGGTTCTGCGGCTGATACCCAGGCCGTTTCGGACTACGTTCG
CTACTTCCTAGCGTCTCACAGGTGTGGTGTGGGTGACCTGTTATTTAGTG
GCAAAAATCAAGTTTTGGCATTGTCACTTAGACGCCGTTTTTTGGTTCCA
TTCTACATGGCTAGCACTCGATTGGCCGTAAACGCCTCTGAATGTTTTCA
AGTGTCTTCACGCAGGCATTCACGATGGAACCTTTCGAGCCCTACTTATG
TTTTCCCCCTTATTCTGTTTGGCGTTGACGTTCTTCTGCTTCCACATTTC
AGCGCTGAGTTAGGGCGACTTCCATCGGTCAAAACTGCAGCATCGCTTGT
ACGTGGGTTATGCTACCAGAACAAAGATAGGCTTCTGGCGGGGATGATCA
TAGCAGGCTGGGACCCGGTAGAGGGAGGATCTGTGTACGAAATTCCATTG
GGGGGGACGGTGATAAAGCAAAAATTCGCCATTGGGGGTTCCGGCTCTAC
CTACATGTGAGCAGCTGAAAATCAATGTGACGTTTCCGTTCTTTCGTCTC
ATGTATCCTCTATCGCTGGAAACTCGCATGTTTGCCTGTTACCACGCTGA
AAATCCCGGCATCCTCTGACGTTCCCAGGCGTATGCCATCTTTAACCTTT
GTTATGCGTGTAATTGATCCAACAGCTACGGCCACGTGGATTCTTCTTTC
AAAGAAAATATGACCAAGGAAGAGGCGCAACAGTTTGTGCGTAAGGCTAT
TTCTCATGCCATGGCCCGCGACGGAAGCTCTGGAGGAGTGATCCGGATGG
TGGTGATCGACAAGACGGGGGTAAGCTCCTCTCCTGGTTTTAATATCATG
GTATCATTTGCTCTTCTTGTGTCCGGAACGATATACTAAATACAAGCTCG
TGTTCATCTATTTTAAGAACCTGTAATTAATCCAACTCGATTCCACTATG
TATACAGGGACAGCATCAACAACTCTCTACTCGTGGTCTCGAATGTAATG
TTTCTTATTCGCCCGCAGCACTTTTTCCCAAGCTTGAAAAACATGCCCAA
CATGACTCCTTCCACGCAGGTGTCTCGGGAGTACATTCCGGGGGATAAAC
TGCCGTTCGGGCCGTGATCGTTGCCCCGTCGGGTCAAAACCTGTCGCCCT
CGTGTGGAAGACAGCCGAAACAAGCAAGAGCTGCCCATCTTACTTAGTAA
CGGTTGAGTTGTTCCCTTGCCAACAAGAGTTGCTGTTGCGTAGGCAGGGG
ACGGTTGTAGGGAAGTTGGGGTTTCACTTTGCTGTGCCGTATGGTGCATA
GCTGCGTCCATAAGTATTTCTGCAGAGACAGTCCGCTCGAGAAATAAAAA
AACATTTTTCTGATTGCAGAGCTCCATATCCTGGGATAATGAAATTTAGC
TTTGTA
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Coding sequence (CDS) from alignment at F-serratus_M_contig102:825717..832672+

>mRNA_F-serratus_M_contig102.276.1 ID=mRNA_F-serratus_M_contig102.276.1|Name=mRNA_F-serratus_M_contig102.276.1|organism=Fucus serratus male|type=CDS|length=1314bp|location=Sequence derived from alignment at F-serratus_M_contig102:825717..832672+ (Fucus serratus male)
ATGAATCTCGGGATGCAACAAGAATACCCAGGCCTGAGGGACGGCGAAAT
ATCCTCTGGGATGAATCTCGGGATGCAACAAGAATACCCAGGCCTGAGGG
ACGGCGAAATATCCTCTGGGACAACCATCATGGCGGTTACCTACGACGGC
GGAGTCATTATGGGCGCAGACTCGCGGACATCGACAGGGACGTACGTGGC
CAACCGCGTGAGCGACAAAATCACAGCATTGCATGATTACATCTATGCCT
GTCGGTCGGGTTCTGCGGCTGATACCCAGGCCGTTTCGGACTACGTTCGC
TACTTCCTAGCGTCTCACAGACAACCATCATGGCGGTTACCTACGACGGC
GGAGTCATTATGGGCGCAGACTCGCGGACATCGACAGGGACGTACGTGGC
CAACCGCGTGAGCGACAAAATCACAGCATTGCATGATTACATCTATGCCT
GTCGGTCGGGTTCTGCGGCTGATACCCAGGCCGTTTCGGACTACGTTCGC
TACTTCCTAGCGTCTCACAGCGCTGAGTTAGGGCGACTTCCATCGGTCAA
AACTGCAGCATCGCTTGTACGTGGGTTATGCTACCAGAACAAAGATAGGC
TTCTGGCGGGGATGATCATAGCAGGCTGGGACCCGGTAGAGGGAGGATCT
GTGTACGAAATTCCATTGGGGGGGACGGTGATAAAGCAAAAATTCGCCAT
TGGGGGTTCCGGCTCTACCTACATCGCTGAGTTAGGGCGACTTCCATCGG
TCAAAACTGCAGCATCGCTTGTACGTGGGTTATGCTACCAGAACAAAGAT
AGGCTTCTGGCGGGGATGATCATAGCAGGCTGGGACCCGGTAGAGGGAGG
ATCTGTGTACGAAATTCCATTGGGGGGGACGGTGATAAAGCAAAAATTCG
CCATTGGGGGTTCCGGCTCTACCTACATCTACGGCCACGTGGATTCTTCT
TTCAAAGAAAATATGACCAAGGAAGAGGCGCAACAGTTTGTGCGTAAGGC
TATTTCTCATGCCATGGCCCGCGACGGAAGCTCTGGAGGAGTGATCCGGA
TGGTGGTGATCGACAAGACGGGGCTACGGCCACGTGGATTCTTCTTTCAA
AGAAAATATGACCAAGGAAGAGGCGCAACAGTTTGTGCGTAAGGCTATTT
CTCATGCCATGGCCCGCGACGGAAGCTCTGGAGGAGTGATCCGGATGGTG
GTGATCGACAAGACGGGGGTGTCTCGGGAGTACATTCCGGGGGATAAACT
GCCGTTCGGGCCGTGAGTGTCTCGGGAGTACATTCCGGGGGATAAACTGC
CGTTCGGGCCGTGA
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