mRNA_F-serratus_M_contig102.261.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A812KR83_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812KR83_9DINO) HSP 1 Score: 83.2 bits (204), Expect = 2.060e-15 Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAP 408 S+KC+G N G+LG G+ +D G P +MGVNL A CA+L S+KCWGLG+ GQLGQGN +N+GDEP + P Sbjct: 1131 SVKCWGRNSLGQLGHGNLEDAGDQ---PGEMGVNLPATDLGDGMTVVRITSGQEHTCAILQDASVKCWGLGTDGQLGQGNTQNLGDEPSEMGSNLP 1223
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A7C1YL65_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YL65_9ACTN) HSP 1 Score: 82.4 bits (202), Expect = 3.260e-15 Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAP-IDLGA 423 ++KC+G+N YG+LG G+TDD+G P +MG NL V CA+LD ++KCWG GS G LG G+ GD+PG + D P +DLGA Sbjct: 244 TVKCWGDNSYGQLGQGTTDDIGDN---PGEMGDNLPPVDLGAGRTATAITAGSFHTCALLDNNTVKCWGYGSFGGLGYGDSVKRGDDPGEMGDNLPAVDLGA 342
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A3M1N8Z3_9BACT (T9SS C-terminal target domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1N8Z3_9BACT) HSP 1 Score: 81.6 bits (200), Expect = 4.360e-15 Identity = 47/110 (42.73%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGST----DDVGKL--SCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAP-IDLGAEI 429 S+KC+GE YG+LG G T DD G++ + PP D+G TA+ CA+LD GS+KCWG GQLGQG+ GD+PG + D P IDLGA + Sbjct: 112 SVKCWGEGDYGQLGQGDTAHRGDDPGEMGDNLPPIDLGAGRTAIAIAAGSFHA---------CALLDDGSVKCWGANDYGQLGQGDTNYRGDDPGEMGDNLPPIDLGAPV 212
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A7C1YRK2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YRK2_9ACTN) HSP 1 Score: 81.3 bits (199), Expect = 8.480e-15 Identity = 45/107 (42.06%), Postives = 58/107 (54.21%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSC------PPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAP-IDLG 420 ++KC+G G G LG GSTD +G + P D+G TA CA+LD G++KCWG SSGQLGQGN ++IGD PG + D P +DLG Sbjct: 129 TVKCWGNGGSGRLGQGSTDTIGDSTAERGDGLPTVDLGTGRTATAIAAGQQYT---------CALLDDGTVKCWGNNSSGQLGQGNTDDIGDNPGEMGDNLPAVDLG 226
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: D7FS37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS37_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 1.430e-14 Identity = 51/113 (45.13%), Postives = 62/113 (54.87%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAPIDLGAEIKTTTMSPTPS 459 S KCFG N GELG G+T DVG L PT+MG NL A CA++ S+ CWG GSSGQLGQG DENI V+ D ID+G++ ++ PTPS Sbjct: 327 SAKCFGANADGELGTGTTQDVGLL---PTEMGDNLIAAAIGDTAQDIAAGGATT--CAIVSDDSVICWGQGSSGQLGQGTDENII----VIEDVETIDVGSDTFASSPGPTPS 430
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A812I3U6_9DINO (RngB protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812I3U6_9DINO) HSP 1 Score: 80.5 bits (197), Expect = 1.680e-14 Identity = 48/106 (45.28%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKL--SCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAP-IDLGAEI 429 S+KC+GE G LG G+T DV L S PP D+G TA CAVLD SIKCWG G+ G+LGQGN IGD+P + D+ P IDL + I Sbjct: 648 SVKCYGEGAVGTLGQGNTADVSDLGDSLPPIDLGTGRTA---------RRIASSEEHVCAVLDDDSIKCWGFGTRGRLGQGNTLTIGDDPNEMGDSLPPIDLQSPI 744
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A840I6P4_9ACTN (Alpha-tubulin suppressor-like RCC1 family protein/outer membrane protein OmpA-like peptidoglycan-associated protein n=1 Tax=Conexibacter arvalis TaxID=912552 RepID=A0A840I6P4_9ACTN) HSP 1 Score: 80.1 bits (196), Expect = 2.330e-14 Identity = 48/117 (41.03%), Postives = 66/117 (56.41%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGST----DDVGKL--SCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAP-IDLGAEIKTTTMSP 450 ++KC+G+NG G+LG+G T D G+L + PP D+G TAV CA+LD G+I+CWG S GQLG G+ E GD+PG L D P +DLG+ T ++P Sbjct: 658 TVKCWGDNGSGQLGLGDTEPRGDQPGELGDALPPVDLGSRRTAVAVSAGRDHS---------CALLDDGTIRCWGGNSDGQLGLGDTEPRGDQPGELGDALPPVDLGSRRTATAIAP 765
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A7C1YKS1_9ACTN (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YKS1_9ACTN) HSP 1 Score: 79.3 bits (194), Expect = 3.950e-14 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAP-IDLG 420 S+KC+G N G LG G+T+++G P +MG NL ++ CA+LD G++KCWG ++GQLGQG+ +IGD PG + D P IDLG Sbjct: 120 SLKCWGNNFGGSLGQGNTNNLGDQ---PNEMGDNLPSIDLGTGRTAVMVVGGLSHVCALLDNGTVKCWGHNTAGQLGQGHTNDIGDNPGEMGDNLPSIDLG 217
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: UPI00188DA198 (RCC1 domain-containing protein n=1 Tax=Nocardioides agariphilus TaxID=433664 RepID=UPI00188DA198) HSP 1 Score: 78.6 bits (192), Expect = 7.040e-14 Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 1 Query: 118 RSIKCFGENGYGELGIGSTDDVGKLSCP----PTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAPIDLG 420 RS++C+G+N +G+LG G+TD+VG + P P D+G TA+ CA+LD S++CWG GQLG GN NIGD+ A +P+DLG Sbjct: 61 RSVRCWGQNNFGQLGYGNTDNVGDSASPATAGPVDLGAGRTALAISAGEAHT---------CAILDDRSVRCWGYNFYGQLGYGNTNNIGDDE-TPASVSPVDLG 155
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 78.2 bits (191), Expect = 8.940e-14 Identity = 44/101 (43.56%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAP-IDLG 420 S+KC+G N YG+LG+G T D G P +MG L A+ CA+LD GSIKCWG + GQLG G+ + GD PG + DT P I LG Sbjct: 182 SVKCWGYNAYGQLGLGDTSDRGD---GPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLG 279 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig102.261.1 >prot_F-serratus_M_contig102.261.1 ID=prot_F-serratus_M_contig102.261.1|Name=mRNA_F-serratus_M_contig102.261.1|organism=Fucus serratus male|type=polypeptide|length=169bp TPHCLGETSLPSSSVRTMCPPRSISAPRTHAHFYNRGRFRSIKCFGENGYback to top mRNA from alignment at F-serratus_M_contig102:103599..106362+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig102.261.1 ID=mRNA_F-serratus_M_contig102.261.1|Name=mRNA_F-serratus_M_contig102.261.1|organism=Fucus serratus male|type=mRNA|length=2764bp|location=Sequence derived from alignment at F-serratus_M_contig102:103599..106362+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig102:103599..106362+ >mRNA_F-serratus_M_contig102.261.1 ID=mRNA_F-serratus_M_contig102.261.1|Name=mRNA_F-serratus_M_contig102.261.1|organism=Fucus serratus male|type=CDS|length=1014bp|location=Sequence derived from alignment at F-serratus_M_contig102:103599..106362+ (Fucus serratus male)back to top |