mRNA_F-serratus_M_contig102.261.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A812WE05_9DINO (UVR8 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812WE05_9DINO) HSP 1 Score: 77.8 bits (190), Expect = 1.330e-13 Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAPIDLGAEI 429 S+KC+G+N +G+LG G T +G P +MG NL V CA+LD S+KCWG G+ GQLG G ++GDEP + D P+ L E+ Sbjct: 297 SVKCWGKNDFGQLGQGHTRSIGD---EPGEMGENLQPVDLGSNRHALAVAAGALHSCAILDDYSVKCWGYGAYGQLGNGGTASLGDEPLEMGDALPVSLFTEV 396
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A812RVA6_9DINO (RngB protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RVA6_9DINO) HSP 1 Score: 77.8 bits (190), Expect = 1.530e-13 Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 118 RSIKCFGENGYGELGIGSTDD--VGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTA-PIDL 417 RS+KC+GEN G+LG GS + + PPTD+G + A+ CA+L S+KCWG GSSGQLGQ + EN+GDEPG + D P++L Sbjct: 256 RSVKCWGENDDGQLGHGSVAHAPLADANLPPTDLGEGMFALRVEAGYYHT---------CAILQDESLKCWGRGSSGQLGQSSTENLGDEPGEMGDQLRPVEL 349
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A1Q9EZZ7_SYMMI (Ultraviolet-B receptor UVR8 n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EZZ7_SYMMI) HSP 1 Score: 77.4 bits (189), Expect = 1.980e-13 Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAPIDLGAEI 429 S+KC+G+N +G+LG G T +G P +MG NL V CA+LD S+KCWG G+ GQLG G ++GDEP + D P+ L E+ Sbjct: 344 SVKCWGKNDFGQLGQGHTRSIGD---EPGEMGENLQPVDLGSNRHALAVAAGALHSCAILDDYSVKCWGYGAFGQLGNGGTASLGDEPLEMGDALPVSLLTEV 443
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A6N7Q6Z9_9DELT (Uncharacterized protein n=2 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7Q6Z9_9DELT) HSP 1 Score: 77.0 bits (188), Expect = 2.480e-13 Identity = 42/108 (38.89%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAP-IDLGAEIKTTT 441 ++KC+G N +G+LG+G T G L P MG+ L AV CA+L +KCWGL SGQLG G+ E GD+PG + D P + LG ++K T Sbjct: 294 ALKCWGTNEFGQLGLGDTAHRGNL---PNQMGMFLPAVDLGQGLTAKAVAVGVYHTCAILSNDMVKCWGLNDSGQLGLGDTERRGDDPGEMGDALPELQLGGKVKAIT 398
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A382THL9_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382THL9_9ZZZZ) HSP 1 Score: 75.5 bits (184), Expect = 2.720e-13 Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADT-APIDLG 420 ++KC+G NGYG+LG G + +G P +MG NL AV CA+L+ G++KCWG + G+LGQG+ IGD+ G + D A +DLG Sbjct: 53 TVKCWGSNGYGQLGQGHSRSLGG---DPGEMGDNLAAVDLGTGKSATAISGGTHFFCALLNDGTVKCWGRNNGGRLGQGHTNRIGDQDGEMGDNLAAVDLG 150
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A7C1UI47_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UI47_9ACTN) HSP 1 Score: 76.6 bits (187), Expect = 2.780e-13 Identity = 44/91 (48.35%), Postives = 52/91 (57.14%), Query Frame = 1 Query: 151 GELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTAPI-DLG 420 G LG GST +VG S +DMG NL+ V CA+LD G++KCWGLGSSGQLG G DE GD+PG + D P DLG Sbjct: 1 GRLGRGSTTNVGSSS---SDMGDNLSPVDLGAGRTAVAISTGGRHTCALLDDGTVKCWGLGSSGQLGTGGDETRGDQPGEMGDNLPAADLG 88
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A2E5ZCB4_9EURY (Uncharacterized protein n=2 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E5ZCB4_9EURY) HSP 1 Score: 77.0 bits (188), Expect = 2.890e-13 Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIG 375 S+KC+G+NGYG+LGIGST D+G + +MG NL V CA+LD G +KCWG+ S GQLG G+ EN+G Sbjct: 2674 SVKCWGDNGYGQLGIGSTYDMGDGA---DEMGDNLATVDLGTGRTAIQIEAGSYHTCAILDSGVMKCWGMNSYGQLGLGHTENVG 2755
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A812R5Q4_SYMMI (HERC5 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R5Q4_SYMMI) HSP 1 Score: 75.1 bits (183), Expect = 2.970e-13 Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEP 384 S+KC+G N G+LG G+ +++G P +MG NL V CA+L S+KCWG G SGQLGQGN E++GDEP Sbjct: 94 SVKCWGANHRGQLGYGNLEEMGDQ---PGEMGANLPVVDLGDGMTVTHLAAGSHVNCAILQDASLKCWGSGVSGQLGQGNTESLGDEP 178
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A812U931_9DINO (UVR8 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812U931_9DINO) HSP 1 Score: 76.6 bits (187), Expect = 3.810e-13 Identity = 41/100 (41.00%), Postives = 52/100 (52.00%), Query Frame = 1 Query: 124 IKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEPGVLADTA-PIDLG 420 +KC+GE GELG GST+ G P +MG+NL CA+L S+KCWG G GQLGQGN EN+GDEP + +D+G Sbjct: 344 VKCWGEGSDGELGHGSTEMAGD---DPGEMGINLPVTDLGEGARAVRIAGSGYHTCAILQDASLKCWGYGGQGQLGQGNAENLGDEPSEMGSALRAVDVG 440
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Match: A0A812J9W4_9DINO (RngB protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812J9W4_9DINO) HSP 1 Score: 76.6 bits (187), Expect = 3.870e-13 Identity = 39/88 (44.32%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 121 SIKCFGENGYGELGIGSTDDVGKLSCPPTDMGVNLTAVXXXXXXXXXXXXXXXXXXCAVLDGGSIKCWGLGSSGQLGQGNDENIGDEP 384 S+KC+G N G+LG G+ +D G P +MG NL A CA+L ++KCWG GSSGQLGQGN E++GDEP Sbjct: 662 SVKCWGRNHRGQLGHGTLEDAGDQ---PGEMGTNLPATNLGDGMTAVYITAGSHFNCAILQDATLKCWGEGSSGQLGQGNTEDLGDEP 746 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig102.261.1 >prot_F-serratus_M_contig102.261.1 ID=prot_F-serratus_M_contig102.261.1|Name=mRNA_F-serratus_M_contig102.261.1|organism=Fucus serratus male|type=polypeptide|length=169bp TPHCLGETSLPSSSVRTMCPPRSISAPRTHAHFYNRGRFRSIKCFGENGYback to top mRNA from alignment at F-serratus_M_contig102:103599..106362+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig102.261.1 ID=mRNA_F-serratus_M_contig102.261.1|Name=mRNA_F-serratus_M_contig102.261.1|organism=Fucus serratus male|type=mRNA|length=2764bp|location=Sequence derived from alignment at F-serratus_M_contig102:103599..106362+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig102:103599..106362+ >mRNA_F-serratus_M_contig102.261.1 ID=mRNA_F-serratus_M_contig102.261.1|Name=mRNA_F-serratus_M_contig102.261.1|organism=Fucus serratus male|type=CDS|length=1014bp|location=Sequence derived from alignment at F-serratus_M_contig102:103599..106362+ (Fucus serratus male)back to top |