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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 62.4 |
Seed ortholog evalue | 9.9e-08 |
Seed eggNOG ortholog | 2880.D8LE22 |
Hectar predicted targeting category | other localisation |
EggNOG free text desc. | Methyltransferase domain |
EggNOG OGs | 2E18F@1,2S8KF@2759 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
Exons | 3 |
Model size | 725 |
Cds size | 213 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928818.3080764-UTR-F-serratus_M_contig1019:217400..217467 | 1622928818.3080764-UTR-F-serratus_M_contig1019:217400..217467 | Fucus serratus male | UTR | F-serratus_M_contig1019 217401..217467 + |
1690962586.3338425-UTR-F-serratus_M_contig1019:217400..217467 | 1690962586.3338425-UTR-F-serratus_M_contig1019:217400..217467 | Fucus serratus male | UTR | F-serratus_M_contig1019 217401..217467 + |
1622928818.3830502-UTR-F-serratus_M_contig1019:221243..221688 | 1622928818.3830502-UTR-F-serratus_M_contig1019:221243..221688 | Fucus serratus male | UTR | F-serratus_M_contig1019 221244..221688 + |
1690962586.377106-UTR-F-serratus_M_contig1019:221243..221688 | 1690962586.377106-UTR-F-serratus_M_contig1019:221243..221688 | Fucus serratus male | UTR | F-serratus_M_contig1019 221244..221688 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928818.326308-CDS-F-serratus_M_contig1019:217467..217524 | 1622928818.326308-CDS-F-serratus_M_contig1019:217467..217524 | Fucus serratus male | CDS | F-serratus_M_contig1019 217468..217524 + |
1690962586.3494947-CDS-F-serratus_M_contig1019:217467..217524 | 1690962586.3494947-CDS-F-serratus_M_contig1019:217467..217524 | Fucus serratus male | CDS | F-serratus_M_contig1019 217468..217524 + |
1622928818.3408387-CDS-F-serratus_M_contig1019:220869..221019 | 1622928818.3408387-CDS-F-serratus_M_contig1019:220869..221019 | Fucus serratus male | CDS | F-serratus_M_contig1019 220870..221019 + |
1690962586.3594637-CDS-F-serratus_M_contig1019:220869..221019 | 1690962586.3594637-CDS-F-serratus_M_contig1019:220869..221019 | Fucus serratus male | CDS | F-serratus_M_contig1019 220870..221019 + |
1622928818.3546798-CDS-F-serratus_M_contig1019:221237..221243 | 1622928818.3546798-CDS-F-serratus_M_contig1019:221237..221243 | Fucus serratus male | CDS | F-serratus_M_contig1019 221238..221243 + |
1690962586.3681378-CDS-F-serratus_M_contig1019:221237..221243 | 1690962586.3681378-CDS-F-serratus_M_contig1019:221237..221243 | Fucus serratus male | CDS | F-serratus_M_contig1019 221238..221243 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1019.257.1 >prot_F-serratus_M_contig1019.257.1 ID=prot_F-serratus_M_contig1019.257.1|Name=mRNA_F-serratus_M_contig1019.257.1|organism=Fucus serratus male|type=polypeptide|length=71bp
MELVEFEDQTTNLIVNYLNMVDRIASLRGTLADIDDSMLDARSARCSSYA DAGKLGCMIWGTSVFRKNVK* back to topmRNA from alignment at F-serratus_M_contig1019:217401..221688+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1019.257.1 ID=mRNA_F-serratus_M_contig1019.257.1|Name=mRNA_F-serratus_M_contig1019.257.1|organism=Fucus serratus male|type=mRNA|length=4288bp|location=Sequence derived from alignment at F-serratus_M_contig1019:217401..221688+ (Fucus serratus male) CGAAGACATAAAAATTACCACACTGGGCAGCCCCGAGACATTCGAAGCAG
CCGGCAAACGGTACGGCATGGAGCTTGTCGAGTTCGAAGATCAAACAACC
AACCTGATCGTTAATTACCTGAACGTGAGCAAGCAATCGATATCATCATG
AAGCCATGATGGGCTATTCGAAGAATGGTTGCTCAGCCCGAAGGATCCTT
GCAAGAGGAGCCACGTCCCGATCTCGCTGTTCGTCAATGAAATATGGTAG
ATTAAACCTCGAACTGTCTCGTTGCCCATGAACAGCAAAGATACAGGGAC
GCTTTTTCAACATGAAACGATATTGTAGCCATAATGTTTATTAATCGGCG
CAGCCTTGACAGGGAAAGCACAATCCCGCCTTGGAACATCGTCCGATGGG
AACGAAGGAGACAAGGGAGTAAGATTATAGCCCATCGGAGCCCGCATCAA
GCAGTAAACGTCCAAACATATTATAATAGTAAAACTGTTACTCATCGTGT
AATCAACGACACGTCCAGACGATAAAGAACTCATAAGTTATCCATTGATC
CAACAAATTTCTCAATGACGTGCATGGTATTAAAACGGTTGCCATATCAT
TTTACCGCACTTTTCCCCTGAAAAACACTGAACATTGATAAGATTTCATG
CTAAGACGAAAATAACATTATTCCCAATTCAATCGATATTACGGAAATCT
GTCTTTCCCCCAAGAAGTCGTAAGAGATGTATCGCAAATAGGTACAAGGA
ACACAGCAGATCTTTCATGAAAAAAACATTTATTTTCGGTCCCTCCCCAA
TGAGATCAATTATCAGGATACTTTATATAATTCACTTATTTTGAACAAGT
CTTCTTTCGGCGACAAACAGAAATTGCGAAACACGTAGAACTACTCATAG
GCACTCAAACAAAAGCCACGACTCAGTTCTGACTTCTGCATCTCAGCAAA
ACTATTGCTCAATCATTGCCTAAAACAAAGGGTCCAAAGGGGCTTCAGGT
TTATGGTGGCGTGTTTAAAGGAGGAGTGAAATACCTTCGCAAACGGGTAG
ATAAAGATAGAGGTGGGCAACGTTGAGATTTTACCTGGGGTGACCGTGCC
ATGTTGATTACACGACCCAAGGGCTGCCAAAGCGCCCCCGTCGATACGAA
AGTCACAGAACCCTGAGAGTACTGCCCTAAAGATGTTATGCCTTTGTGTG
CAAATGCAAGGAGTTTTAGTCCGAGTAGAGCTGCTCCGGATGCGCTCGCG
GCTGGCGCTGTACTAACTCTCCCTAGAAAGTGCCACTCTTTATGTTGCGA
ACCTGCGTGTATGCGCCACGCAGCTTCTTTCTTTATTGTTTCCCTGTGCC
TCTCTGCGTCCTCTCTTTCCTTTTTTTCTTTCTTTTTAATCGTCGTTTTG
TTCTGTGTTTGTAATGTATGCCTTGGTTAGAGCTTTTTAGATGTTTCTCT
GATCGTTTCTTGTCCAGCAGACCACGTGCCTGATTGGAAAATATTATTGG
GTGTACTCGAGACCCGACCGTTTACATACAGCCGGTACTTTTAACATGCC
CACTCCATACCAATAGTGGGTGTGGGAAAGAGAGACGTATATTAAATGCT
TCATAGTGACCTGCTAAGGCAGCCCTCGTTTGGAACTACCTTGAGGTTTA
CCGACTCTGTGCCGGTGGACTCTCGGCAGTGAAGCCATCGGTACGCATTT
GCGTGGCCCGATAAACTTGGGACTGACCCGATGGCGTATGGCGGATTAAG
GACGCCGCCGCGGAACTCGGGAGAAATTCCGTAAGTAAGCATCAGATTCA
GCCTGAGTATAGAGATGAGCAGGCTGGCGCGGGACGGGACTGCCGAAACC
GTCTCGCGAGACCAAATTCTCAGGCACGAACGCGGACAGGGAAATTTTCA
TTTTCCCTGTTCAGCTGACCACGAACAGGATTGGCAACCTTATCCAGTTG
ATCCATACTCTTGCTATATTGTGACCATACATACACAAATATGCATACAT
ACATAAATACATACATACATACATGCATACATACATACATACATACATAC
ATACAATTGATAAATATACATACAATCATACATGTCGCGTCTGATCAGAG
GTTTTCGAAATAAGTTTCATTGATCCCCCCTTGGGAGGATCAATACGAGT
GGCATAGAATAACTAGGATGACAGGGCCGGATTGCGCGGTTATGTGCAAT
TTAATAAATATACATACATAATACATACAAATACATTTCGAAATAAGTTT
CATTGATTCCCCCTAGGGAGGATCAATGCGAGTGGCATAGAATGACTAGG
ATGACAGGGCCGGATTGCGCGGTTATGTGCAATTTAATAAATATACATAC
ATACATACATACATACATACATACATACATACATACATACATACATACAT
ACATACATCCTTTGTCGCGTCTGATCAGAGGTTTTCGTAATAAGTTTCAT
TGATCCCCCCTTGGGAGGATCAATACGAGTGGCATAGAATGACTAGGATG
ACAGGGCCGGATTGCGCGGTTATGTGCAATTTAATAAATATACATACATA
CATACATACATACATACATACATACACACATACATACATACATACATACA
TACATACATACATAAATACATACAAACATACATACATATATAAGTATACG
CAGGTACATAAATGCGGTTATGTTCAATGTAGTAACTCCCTGCGTCATAA
CACTACATACATGCAAACGTCCAGTGCACTCAAGAGCTGATGATAGCACA
ACGCCTAACAGACTAATATGTCTACAGGGTTACATGGATATGCATCGCAC
GTTGCTAGACCTACCATGAAGACTCCGAGCCTGTGCCGGTGGGTTGTCGG
CGGTGAACCCAATTGGTGTGAGATAATTAGCTCGAAAGTGACCTGTGGGC
GGTGGACGATATAGATACAAAAACATTTTTACGGAAAGCGAGAAAGTAAA
GAGGAGCCCGTTACCAGTTTCTGTCTGAGTTAAGAAAATGAGAGGTCATG
AGACCTTACTCTCGTGTGCAAAGAGATGCAGGGAAAGTTCTAACTCCCTG
TTCTGCTGAATGGGCTAGAGACGGTATTCCTTTGATTCGTAGTTCAATAC
TACTATTTTTTTGTTTTTGTTTTGTTTTTGTTTTGTTTTTAATCTCACTT
ATAGCCGATGGACCTCTAACTATCATCCTGCCTTTGGTCACAAAGGATCT
TCCTATCTCTCCCCGGTTCACGCCTTGCAATTTTTATCGCGATGTAAGTT
CAGCACTCTTACAACTCGTCAACCAATGGTTGAATTTTACTTACTCACGT
TCCCACGCTTTCCGTTACGAAAGAAAGAACACAAATTCTGCTTAAGCTAA
GAATCGAACTCACGACTTCCGCACTAGCAGGTATGCAGGTTACCTACTAG
ACCACTCGGGCGACGAATGGCTAATATAAATATATGCTCGCATCCCTACA
ATGTACTTGTTTCCCTCAGATGGTCGACAGGATTGCTTCTCTTAGGGGAA
CCCTGGCGGACATCGATGACAGTATGCTCGATGCACGGAGTGCTCGGTGC
AGCTCATATGCTGATGCAGGAAAACTCGGCTGCATGATCTGGGGAACCTC
CGTTTTTAGGAAGAATGTGGTAGGTCCAAAACACCGAGGTCGCAGAGTTT
GCCGAGTCCGATTAGGCGCGCATACCGTTTTTCAGCTTTGAATCTTCTAA
GATGACGCTGCATCCAAGTCACCATACCGTTCAGGCTTTACGAATCAATA
GTTAACGATAACATATATTGCCCAATTAACATAGAAGCTTACCGATCGTA
TCGCAACATCTTCCCCGTTCGCTGGCGTTTTATGCAGAAGTAAAGCAGGG
TTACCTTTTTCTGCTGAAACTCAATCGTCTTTTTTGAGACTTTATGAACG
ATGAAGCAGACGATTTATCTCGGCCGAACACCTTCGATGAAGAAGACAAG
CTGCGGGGAGTGTCGTTTTATGCTACATGGGTCAATTTCCGTTTCGCGGG
GAGTGTTGTATTTGAATGTTCCTTCGTCATGAACGCCTCGTAGAAAAGTT
GTGCTTCAAAGATCTTGTAAGAGGTCGAATGGTGAGTAGGACCCGTTCTG
AACTCGTGTGATTGTAATAAGGTGTCGCTGGGCGGGTGGAAATGAATCAG
GTTACATTGCCATTTTGTAGCCTGGTTCTGAATGGCGTCGGGTAACAAAC
AAACGTAGATTGATAATTCTGCATTGTGAATCTGAACGTTTGGAGTTACC
TTTCACCGGGGTTTGATCGATATATAAGTAGTTAATGC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1019:217401..221688+ >mRNA_F-serratus_M_contig1019.257.1 ID=mRNA_F-serratus_M_contig1019.257.1|Name=mRNA_F-serratus_M_contig1019.257.1|organism=Fucus serratus male|type=CDS|length=426bp|location=Sequence derived from alignment at F-serratus_M_contig1019:217401..221688+ (Fucus serratus male) ATGGAGCTTGTCGAGTTCGAAGATCAAACAACCAACCTGATCGTTAATTA CCTGAACATGGAGCTTGTCGAGTTCGAAGATCAAACAACCAACCTGATCG TTAATTACCTGAACATGGTCGACAGGATTGCTTCTCTTAGGGGAACCCTG GCGGACATCGATGACAGTATGCTCGATGCACGGAGTGCTCGGTGCAGCTC ATATGCTGATGCAGGAAAACTCGGCTGCATGATCTGGGGAACCTCCGTTT TTAGGAAGAATGTGATGGTCGACAGGATTGCTTCTCTTAGGGGAACCCTG GCGGACATCGATGACAGTATGCTCGATGCACGGAGTGCTCGGTGCAGCTC ATATGCTGATGCAGGAAAACTCGGCTGCATGATCTGGGGAACCTCCGTTT TTAGGAAGAATGTGAAGTAAAAGTAA back to top
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