mRNA_F-serratus_M_contig1019.256.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1019.256.1 vs. uniprot
Match: D8LE22_ECTSI (Probable glycine-sarcosine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE22_ECTSI) HSP 1 Score: 103 bits (257), Expect = 5.290e-25 Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 4 VVCIEMTREFNAINAARSMRAGLTDNIIIPGERSIFETGIPAASMDRLMSTDCFGHVDGKTDAVMKEAARVLKRGSLMVFTSLMRSSTADATSL 285 VVCI+++R FNA+NA S AGL+D IIIPGERS F+T +PAASMD ++S D FGH + +KEAARVLK G +M F+ M+S AD T L Sbjct: 80 VVCIDISRGFNAVNAKLSAAAGLSDKIIIPGERSYFDTEMPAASMDAVLSQDAFGHASTEHHRAIKEAARVLKPGGVMAFSDFMQSDDADPTKL 173
BLAST of mRNA_F-serratus_M_contig1019.256.1 vs. uniprot
Match: A0A6H5KC33_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC33_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 5.890e-17 Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 1 KVVCIEMTREFNAINAARSMRAGLTDNIIIPGERSIFETGIPAASMDRLMSTDCFGHVDGKTDAVMKEAARVLKRGSLMVFTSLMRSSTAD 273 KVVCI + N IN A + AGL D +I+PGE+S FETG+P AS D + S D H + + EAARVLK G MVFT +M+S AD Sbjct: 120 KVVCINVASRENEINTAITKDAGLQDKVIVPGEKSFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQSKEAD 210
BLAST of mRNA_F-serratus_M_contig1019.256.1 vs. uniprot
Match: D7G7W9_ECTSI (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W9_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 2.170e-15 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 1 KVVCIEMTREFNAINAARSMRAGLTDNIIIPGERSIFETGIPAASMDRLMSTDCFGHVDGKTDAVMKEAARVLKRGSLMVFTSLMR 258 KVVCI +++ N N A + AGL D +I+PGE+S FETG+P AS D + S D H + M EAARVLK G MVF+ +M+ Sbjct: 93 KVVCINVSKRENETNVAMTKEAGLQDKVIVPGEKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVFSDIMQ 178
BLAST of mRNA_F-serratus_M_contig1019.256.1 vs. uniprot
Match: A0A6H5KZ03_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ03_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 2.850e-15 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 4 VVCIEMTREFNAINAARSMRAGLTDNIIIPGERSIFETGIPAASMDRLMSTDCFGH 171 VVCI+++R FN +NA S AGL+D IIIPGERS F+T +PAASMD ++S D FGH Sbjct: 81 VVCIDISRGFNTVNAKLSAAAGLSDKIIIPGERSYFDTEMPAASMDAVLSQDAFGH 136
BLAST of mRNA_F-serratus_M_contig1019.256.1 vs. uniprot
Match: A0A835YZA4_9STRA (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA4_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 4.620e-15 Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 4 VVCIEMTREFNAINAARSMRAGLTDNIIIPGERSIFETGIPAASMDRLMSTDCFGHVDGKTDAVMKEAARVLKRGSLMVFTSLMRSSTADATSL 285 V CI+++ + N +N + + GL D ++IPGERS FETG PA + D ++S D H + ++EAARVLK G +VFT +M+S+ A+ L Sbjct: 105 VTCIDISCKENEVNRSTTAAEGLADKVLIPGERSFFETGEPAGAYDAVVSQDSLLHAGSERCRAIEEAARVLKPGGCLVFTDIMQSNDANTAEL 198
BLAST of mRNA_F-serratus_M_contig1019.256.1 vs. uniprot
Match: D7G5Z7_ECTSI (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Z7_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 2.650e-13 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 1 KVVCIEMTREFNAINAARSMRAGLTDNIIIPGERSIFETGIPAASMDRLMSTDCFGHVDGKTDAVMKEAARVLKRGSLMVFTSLMRSSTAD 273 KV CI +T N +N A S AG+ D +IIPGE+S F+TG+P A + + S D H + + EAAR+LK G MVF +M+++ AD Sbjct: 434 KVYCINVTSRENDVNRALSKAAGIEDLVIIPGEKSYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNHAD 524
BLAST of mRNA_F-serratus_M_contig1019.256.1 vs. uniprot
Match: A0A6H5L7A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A2_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 1.250e-12 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 4 VVCIEMTREFNAINAARSMRAGLTDNIIIPGERSIFETGIPAASMDRLMSTDCFGHVDGKTDAVMKEAARVLKRGSLMVFTSLMRSSTAD 273 V CI +T N +N A S AG+ D +IIPGE+S F+TG+P A + + S D H + + EAAR+LK G MVF +M+++ AD Sbjct: 292 VYCINVTSRENDVNRALSKAAGIEDLVIIPGEKSYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNHAD 381
BLAST of mRNA_F-serratus_M_contig1019.256.1 vs. uniprot
Match: A0A6H5L6E6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E6_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 2.810e-12 Identity = 37/90 (41.11%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 4 VVCIEMTREFNAINAARSMRAGLTDNIIIPGERSIFETGIPAASMDRLMSTDCFGHVDGKTDAVMKEAARVLKRGSLMVFTSLMRSSTAD 273 V CI +T N +N A S AG+ + +IIPGE+S F+TG+P A + + S D H + + EAAR+LK G MVF +M+++ AD Sbjct: 235 VYCINVTSRENDVNRALSKAAGIENLVIIPGEKSYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNNAD 324
BLAST of mRNA_F-serratus_M_contig1019.256.1 vs. uniprot
Match: L1JQG8_GUITC (Methyltransf_11 domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JQG8_GUITC) HSP 1 Score: 69.7 bits (169), Expect = 4.800e-12 Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 1 KVVCIEMTREFNAINAARSMRAGLTDNIIIPGERSIFETGIPAASMDRLMSTDCFGHVDGKTDAVMKEAARVLKRGSLMVFTSLMRSSTADATSL 285 KVVC+E+++ N +N R++ + D II+PGE S +T A D +S D H AV+ EAARVL++G L VF+ +M+ D ++L Sbjct: 102 KVVCVELSKRENEVNIQRNVELKMQDKIIVPGELSFLDTQQEAGVFDCCVSEDSILHAGKARPAVVAEAARVLRKGGLFVFSDIMQKDCVDTSTL 196 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1019.256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1019.256.1 >prot_F-serratus_M_contig1019.256.1 ID=prot_F-serratus_M_contig1019.256.1|Name=mRNA_F-serratus_M_contig1019.256.1|organism=Fucus serratus male|type=polypeptide|length=91bp MTREFNAINAARSMRAGLTDNIIIPGERSIFETGIPAASMDRLMSTDCFGback to top mRNA from alignment at F-serratus_M_contig1019:216700..217156+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1019.256.1 ID=mRNA_F-serratus_M_contig1019.256.1|Name=mRNA_F-serratus_M_contig1019.256.1|organism=Fucus serratus male|type=mRNA|length=457bp|location=Sequence derived from alignment at F-serratus_M_contig1019:216700..217156+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1019:216700..217156+ >mRNA_F-serratus_M_contig1019.256.1 ID=mRNA_F-serratus_M_contig1019.256.1|Name=mRNA_F-serratus_M_contig1019.256.1|organism=Fucus serratus male|type=CDS|length=546bp|location=Sequence derived from alignment at F-serratus_M_contig1019:216700..217156+ (Fucus serratus male)back to top |