mRNA_F-serratus_M_contig1013.224.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1013.224.1
Unique NamemRNA_F-serratus_M_contig1013.224.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A067BMW8_SAPPC (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BMW8_SAPPC)

HSP 1 Score: 235 bits (599), Expect = 7.340e-73
Identity = 117/238 (49.16%), Postives = 161/238 (67.65%), Query Frame = 1
Query:  289 TVSGSPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAPQR 1002
            + +G P + +L+  H P +P Q++ +A  +AVS   +P RGDM+AALG+ TG++AL +++  M +DP G EI+  KP I     D+ AL +LP  +FG +Y+ FM+ + F  D R+ V+FVDD +LAYV++RYRE+HDFWHVL GLPPTV  E+ALK+ ELVQTGLP+CAL    GPL L   E   R+ L  T+VPWA RAGR     L+ V+YER +E  LE +R+ L  +VAP R
Sbjct:   21 SAAGPPTRHVLHAHHVPTTPTQKLLVAATAAVSVFANPERGDMLAALGDATGEVALRQMHLKMCSDPVGMEILAQKPRIRSSVTDIDALRSLPTDSFGYAYTQFMDAHGFEADGRAHVRFVDDAELAYVLQRYRELHDFWHVLFGLPPTVFSEIALKYVELVQTGLPVCALSGFVGPLRLSCDE---RKELLGTFVPWAYRAGREA-PCLLNVYYEREYETKLEDLRRRLNIRVAPAR 254          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A2D4BE84_PYTIN (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE84_PYTIN)

HSP 1 Score: 236 bits (601), Expect = 7.360e-73
Identity = 119/243 (48.97%), Postives = 164/243 (67.49%), Query Frame = 1
Query:  268 ATAGADYTVSGSPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            AT+ +  +V+G P +R+LY  H P SP Q++A++  SA + L +P RGDM+A LGEVTG+ AL R++  M +DP GA I+  +P I    +D+  L ALP+ +FG +YS FM+ + F  D R+ V +VDD +LAY+M+RYRE+HDFWH L GLPPTV GE+ALK+ ELVQTGLP+CAL    GPL L  +E   R  L   Y+PWA +AG+  R  LM V+YE+ +E PL ++R+ L     P
Sbjct:   35 ATSFSSASVAGEPARRVLYPTHTPTSPVQKIALSFVSAFTVLGNPERGDMLATLGEVTGRQALLRMHARMCSDPVGARILAERPSIRSDRIDIEYLRALPKDSFGFAYSQFMDAHGFEADGRAYVHYVDDPELAYIMQRYRELHDFWHTLYGLPPTVFGEIALKYVELVQTGLPVCALSGFVGPLRLTSQE---RHRLLTEYIPWAHQAGKQARF-LMSVYYEKEFETPLAELRERLRILPPP 273          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A6I8NU36_ORNAN (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8NU36_ORNAN)

HSP 1 Score: 236 bits (601), Expect = 9.450e-73
Identity = 118/226 (52.21%), Postives = 159/226 (70.35%), Query Frame = 1
Query:  319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            LY  H P SP Q+V +A  SAV AL DP R DMVA LGE TG+ AL+ L + M  DPEGA I+  +P I   T+DL+ L ALPEGTFG+ Y +F++ N+ SPD+R+P +FVDD++LAYV++RYREVHD  H L G+P  + GE+ +KWFE VQ GLPMC LGAVFGP+ L  ++    + L    +PWA+R+GR++R  L  ++YERRW++PLE +R++L     P
Sbjct:   54 LYPEHIPTSPLQKVLLAAGSAVMALYDPYRHDMVAVLGETTGRWALQALRQQMRKDPEGALILQERPRIQLSTLDLNRLRALPEGTFGREYVHFLDDNRVSPDTRAPTRFVDDEELAYVIQRYREVHDLLHTLLGMPTNMLGEVVVKWFEAVQLGLPMCILGAVFGPIRLNAQK---LQALTGDLIPWAVRSGRASRCVLN-LYYERRWDQPLEALREELRIPQPP 275          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: W5LXV6_LEPOC (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=5 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5LXV6_LEPOC)

HSP 1 Score: 233 bits (595), Expect = 1.120e-72
Identity = 118/226 (52.21%), Postives = 153/226 (67.70%), Query Frame = 1
Query:  319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            LY  H P +P Q+  +A  S ++ALRDP R DMVA LGE TG+LAL RL   M  DPEG  I+  +P I   T+D  AL +LPEG+ G+ Y  F++ NK +PDSR+ VKFVDD++LAYVM RYREVHD  H L G+P  + GE+A+KWFE  QTGLPMC LGA  GPL L  R     ++LA T  PWALR+GR  R  ++ V+YE+RW + L ++R++LG +  P
Sbjct:    7 LYQSHIPTNPLQKALLAVGSGIAALRDPYRHDMVAVLGETTGQLALRRLRDEMRRDPEGCSILQERPRIRLSTLDPCALGSLPEGSLGREYLRFLQRNKVTPDSRAEVKFVDDEELAYVMLRYREVHDLMHTLLGMPTNMLGEVAVKWFEAAQTGLPMCILGAALGPLRLSARR---LQLLAGTLAPWALRSGRGARC-VLTVFYEQRWAQSLAELREELGIEPPP 228          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A7L0M6B1_9PSIT (COQ4 protein (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L0M6B1_9PSIT)

HSP 1 Score: 234 bits (597), Expect = 1.140e-72
Identity = 118/226 (52.21%), Postives = 153/226 (67.70%), Query Frame = 1
Query:  319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            LY GH P SP Q+  +A  SAV AL DP R DMVA LGE TG LAL  L   M   PEG  I+  +P I   T+D+S L  LP+G+ G+ Y  F+E NK SPD+R P KFVDD++LAYV++RYREVHD  H L G+P  + GE+ +KWFE VQTGLPMC LGA FGP+ L  R+    +VLA   VPWA+R+GR+    ++ V+YE+RWE+P+E +R+++G    P
Sbjct:   29 LYPGHIPTSPLQKALLAAGSAVMALYDPYRHDMVAVLGETTGCLALPNLRDKMKHHPEGYRILQERPRIRLSTLDMSRLRGLPDGSLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDMMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCVLGAAFGPIHLSARK---LQVLATELVPWAIRSGRNA-SCILNVYYEQRWEQPVESLREEIGIFPPP 250          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A7K5HSE3_CROSL (COQ4 protein (Fragment) n=1 Tax=Crotophaga sulcirostris TaxID=33598 RepID=A0A7K5HSE3_CROSL)

HSP 1 Score: 233 bits (594), Expect = 2.260e-72
Identity = 116/229 (50.66%), Postives = 156/229 (68.12%), Query Frame = 1
Query:  310 KRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            +R LY GH P SP Q+  +A  SA++AL DP R DMVA LGE TG LAL  L   M   PEG  I+  +P I   T+D++ L  LP+GT G+ Y  F+E NK SPD+R P KFVDD++LAYV++RYREVHD  H L G+P  + GE+ +KWFE VQTGLPMC LGA FGP+ L  R+    +VLA   +PWA+R+GR+    ++ ++YE+RWE+P+E +R+++G    P
Sbjct:   15 RRPLYPGHIPTSPLQKALLAAGSALAALYDPYRHDMVAVLGETTGCLALPNLRDKMKHHPEGYRILQERPRIRFSTLDMARLRGLPDGTLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCILGAAFGPVHLSTRK---LQVLATELLPWAVRSGRNA-SCVLNIYYEQRWEQPVESLREEIGIFPPP 239          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A7L4GM74_PODST (COQ4 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L4GM74_PODST)

HSP 1 Score: 234 bits (596), Expect = 2.520e-72
Identity = 115/226 (50.88%), Postives = 154/226 (68.14%), Query Frame = 1
Query:  319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            LY GH P SP Q+  +A  SAV+AL DP R DMVA LGE TG LAL  L   M   PEG  I+  +P I   T+D++ L  LP+G+ G+ Y  F+E NK SPD+R P KFVDD++LAYV++RYREVHD  H L G+P  + GE+ +KWFE +QTGLPMC LGA FGP+ L  R+    +VLA   VPWA+R+GR+    ++ ++YE+RWE+P+E +R+++G    P
Sbjct:   43 LYPGHIPTSPLQKALLAAGSAVTALCDPYRHDMVAVLGETTGCLALPHLRDKMKRHPEGHRILQERPRIRLSTLDMARLRGLPDGSLGREYVRFLEDNKVSPDTRMPTKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAIQTGLPMCVLGAAFGPVRLSARK---LQVLATELVPWAIRSGRNA-SCILNIYYEQRWEQPVESLREEIGIFPPP 264          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: U3JF63_FICAL (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=57 Tax=Passeriformes TaxID=9126 RepID=U3JF63_FICAL)

HSP 1 Score: 232 bits (592), Expect = 3.610e-72
Identity = 118/226 (52.21%), Postives = 153/226 (67.70%), Query Frame = 1
Query:  319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            LY GH P SP Q+  +A  SAV AL DP R DMVA LGE TG LAL  L   M   PEG  I+  +P I+  T+D++ L  LPEG+ G+ Y  F+E NK SPD+R P KFVDD++LAYV++RYREVHD  H L G+P  + GE+ +KWFE VQTGLPMC LGA FGP+ L  R+    +VLA   VPWA+R+G +    ++ V+YE+RWE+P+E +R++LG    P
Sbjct:    7 LYPGHIPTSPLQKALLAAGSAVMALYDPYRHDMVAVLGETTGCLALPNLRDKMKNHPEGHRILQERPRIHLSTLDMARLQGLPEGSLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCVLGAAFGPVRLSTRK---LQVLATELVPWAIRSGLNA-SCVLNVYYEQRWEQPVESLREELGIFPPP 228          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A8C3GKG3_CAIMO (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=3 Tax=Anatidae TaxID=8830 RepID=A0A8C3GKG3_CAIMO)

HSP 1 Score: 233 bits (593), Expect = 3.760e-72
Identity = 116/226 (51.33%), Postives = 153/226 (67.70%), Query Frame = 1
Query:  319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            LY GH P SP Q+  +A  SA++ALRDP R DMVA LGE TG LAL  L   M   PEG  I+  +P I   T+D+  L  LP+GT G+ Y  F+E NK SPD+R P KFVDD++LAYV++RYREVHD  H L G+P  + GE+ +KWFE VQTGLPMC LGA FGP+ L  R+    +VLA   VPWA+R+GR+    ++ ++YE+RWE+ +E +R+++G    P
Sbjct:   19 LYPGHIPTSPLQKALLAAGSALAALRDPYRHDMVAVLGETTGCLALPSLRDKMRHHPEGYRILQERPRIRLSTLDVDRLRGLPDGTLGREYVRFLEDNKVSPDTRMPAKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCILGAAFGPVRLNARK---LQVLATELVPWAIRSGRNA-SCILNIYYEQRWEQSVESLREEIGILPPP 240          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A7L3PZX3_9DEND (COQ4 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L3PZX3_9DEND)

HSP 1 Score: 233 bits (593), Expect = 3.880e-72
Identity = 118/226 (52.21%), Postives = 152/226 (67.26%), Query Frame = 1
Query:  319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            LY GH P SP Q+  +A  SAV AL DP R DMVA LGE TG LAL  L   M   PEG  I+  +P I   T+D+S L  LP+G+ G+ Y  F+E NK SPD+R P KFVDD++LAYV++RYREVHD  H L G+P  + GE+ +KWFE VQTGLPMC LGA FGP+ L  R+    +VLA   VPWA+R+G +    ++ V+YE+RWE+P+E +R++LG    P
Sbjct:   24 LYPGHIPTSPLQKALLAAGSAVMALYDPYRHDMVAVLGETTGCLALPNLRDKMKHHPEGYRILQERPRIRLSTLDMSRLRGLPDGSLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCVLGAAFGPIRLSARK---LQVLATELVPWAIRSGLNA-SCVLNVYYEQRWEQPVESLREELGILPPP 245          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067BMW8_SAPPC7.340e-7349.16Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A2D4BE84_PYTIN7.360e-7348.97Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A6I8NU36_ORNAN9.450e-7352.21Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
W5LXV6_LEPOC1.120e-7252.21Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A7L0M6B1_9PSIT1.140e-7252.21COQ4 protein (Fragment) n=4 Tax=Neognathae TaxID=8... [more]
A0A7K5HSE3_CROSL2.260e-7250.66COQ4 protein (Fragment) n=1 Tax=Crotophaga sulciro... [more]
A0A7L4GM74_PODST2.520e-7250.88COQ4 protein (Fragment) n=2 Tax=Neognathae TaxID=8... [more]
U3JF63_FICAL3.610e-7252.21Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A8C3GKG3_CAIMO3.760e-7251.33Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A7L3PZX3_9DEND3.880e-7252.21COQ4 protein (Fragment) n=2 Tax=Neognathae TaxID=8... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1013contigF-serratus_M_contig1013:250390..253394 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score376.7
Seed ortholog evalue1.1e-101
Seed eggNOG ortholog2880.D7FK62
Preferred nameCOQ4
KEGG koko:K18586
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0019866,GO:0019898,GO:0031090,GO:0031312,GO:0031314,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663
EggNOG free text desc.ubiquinone biosynthetic process
EggNOG OGsCOG5031@1,KOG3244@2759
Ec32 ortholog descriptionUbiquinone biosynthesis protein Coq4
Ec32 orthologEc-04_005680.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons6
Model size1005
Cds size1005
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1013.224.1prot_F-serratus_M_contig1013.224.1Fucus serratus malepolypeptideF-serratus_M_contig1013 250390..253394 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928813.1359649-CDS-F-serratus_M_contig1013:250389..2505461622928813.1359649-CDS-F-serratus_M_contig1013:250389..250546Fucus serratus maleCDSF-serratus_M_contig1013 250390..250546 -
1690962583.632623-CDS-F-serratus_M_contig1013:250389..2505461690962583.632623-CDS-F-serratus_M_contig1013:250389..250546Fucus serratus maleCDSF-serratus_M_contig1013 250390..250546 -
1622928813.152978-CDS-F-serratus_M_contig1013:250591..2507561622928813.152978-CDS-F-serratus_M_contig1013:250591..250756Fucus serratus maleCDSF-serratus_M_contig1013 250592..250756 -
1690962583.6519096-CDS-F-serratus_M_contig1013:250591..2507561690962583.6519096-CDS-F-serratus_M_contig1013:250591..250756Fucus serratus maleCDSF-serratus_M_contig1013 250592..250756 -
1622928813.1737757-CDS-F-serratus_M_contig1013:251111..2512361622928813.1737757-CDS-F-serratus_M_contig1013:251111..251236Fucus serratus maleCDSF-serratus_M_contig1013 251112..251236 -
1690962583.659604-CDS-F-serratus_M_contig1013:251111..2512361690962583.659604-CDS-F-serratus_M_contig1013:251111..251236Fucus serratus maleCDSF-serratus_M_contig1013 251112..251236 -
1622928813.1965365-CDS-F-serratus_M_contig1013:251724..2518121622928813.1965365-CDS-F-serratus_M_contig1013:251724..251812Fucus serratus maleCDSF-serratus_M_contig1013 251725..251812 -
1690962583.6764576-CDS-F-serratus_M_contig1013:251724..2518121690962583.6764576-CDS-F-serratus_M_contig1013:251724..251812Fucus serratus maleCDSF-serratus_M_contig1013 251725..251812 -
1622928813.214653-CDS-F-serratus_M_contig1013:252487..2528661622928813.214653-CDS-F-serratus_M_contig1013:252487..252866Fucus serratus maleCDSF-serratus_M_contig1013 252488..252866 -
1690962583.6856618-CDS-F-serratus_M_contig1013:252487..2528661690962583.6856618-CDS-F-serratus_M_contig1013:252487..252866Fucus serratus maleCDSF-serratus_M_contig1013 252488..252866 -
1622928813.242786-CDS-F-serratus_M_contig1013:253303..2533941622928813.242786-CDS-F-serratus_M_contig1013:253303..253394Fucus serratus maleCDSF-serratus_M_contig1013 253304..253394 -
1690962583.6961598-CDS-F-serratus_M_contig1013:253303..2533941690962583.6961598-CDS-F-serratus_M_contig1013:253303..253394Fucus serratus maleCDSF-serratus_M_contig1013 253304..253394 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1013.224.1

>prot_F-serratus_M_contig1013.224.1 ID=prot_F-serratus_M_contig1013.224.1|Name=mRNA_F-serratus_M_contig1013.224.1|organism=Fucus serratus male|type=polypeptide|length=335bp
WDQRQKRRSALALSGNQLYHPSFEMNLGMRGPLSVRSQLLHLASLSGRAT
ATVRTSLRSRLKSPAVSCPLQSPPCSCTFVTRSSERVTAATAGADYTVSG
SPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKL
ALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNF
MEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGEL
ALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGR
STRKPLMCVWYERRWEEPLEQVRKDLGFKVAPQR*
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mRNA from alignment at F-serratus_M_contig1013:250390..253394-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1013.224.1 ID=mRNA_F-serratus_M_contig1013.224.1|Name=mRNA_F-serratus_M_contig1013.224.1|organism=Fucus serratus male|type=mRNA|length=3005bp|location=Sequence derived from alignment at F-serratus_M_contig1013:250390..253394- (Fucus serratus male)
TGGGACCAGAGGCAAAAACGCAGGTCAGCATTAGCTCTGTCTGGAAATCA GCTTTATCATCCTTCCTTCGAGATGAACTTGGGTATGAGAGGTATGTAAT ATAAGAAAAACAGCGATGGTGACGGGTTACCAGCGATAAAGCGCCACCGT TCGTTTCTGAACTTAATGATGTGATACAGAGCAGTTGTTCGAATACAGTA AATACGATTATTATTGGTCTAATACTACTCTTTGATCCTGAGTTTTAACC CGTAGTTCTTGACGAAGGCTGTACTTGTAGTCGTGAGACCGTTCTTACTT CCTACCCCTCCCAAAGCTTCCACGATTTTGATCTCGCTCTTCATTATAAG CACAATGGTTCTTCGTGCCTGTGCACAGCTTACAGTGAATGACCACATTT TAGTAGGTTACTCTTTGGCAAAACCTCCTCCCGGCAGTATATAGAGCAAT TCATTCAGTGACGGTACGCTGTGATCTCTCTCGAGGGAACCTGTTACCTA TTCTCGTCGAATCCCTGCCCATCAACAGGTCCTCTCTCCGTAAGGTCTCA GCTTCTTCACCTAGCCTCACTAAGTGGGCGCGCTACTGCTACAGTGAGAA CCTCGCTGCGATCGAGGCTCAAATCCCCAGCAGTTTCGTGCCCCCTTCAA TCACCTCCCTGTAGTTGTACCTTCGTCACGAGGAGCAGCGAACGCGTCAC TGCAGCCACGGCTGGCGCCGACTACACTGTATCGGGTTCGCCTGAGAAGA GGATTCTCTACGGGGGTCACCAGCCGATATCGCCCTGGCAGCGAGTAGCC ATCGCTGGTTGGTCGGCCGTGTCGGCGTTGAGAGATCCCGGGCGAGGGGA TATGGTGGCGGCTTTGGGAGAGGTGACTGGAAAGTTAGCGCTCGAGAGGC TGTACAGGTACATACACAAAAATATGAGATGACTTCAACCAGGAAATAAT CGCGTATGATCATCAATTCTCGATGGAGGAGGTGCTCGATCGTTGTGGCG CGTGATAGGTTTAGCCGTAGCACGCACGTTTTGGGGAAAGCGGCAGGGGA AACTTCAGAATAGAAAGGTTTATTTTCCTCCATGTCATTCATGCAGTTGT TGGAGTTGTCGTCTATTTGCCAGCAGATTGTCCGGGTTCAGGTTAACCAG AGGTGTTCCTCGACACTACAGACTGTGTCGAAGCGCTTTGACTATTATAT TAGCTCCATTATATTACTATTCTTGCAAAGCTCGCACCTCTCGGGAGAAC CGAGTGCTCGATTTTTTCAGACTCTTCCCGAGCCGATGAACCCGCGTTAG TTCGTACAGCAACCGCGTTACGCGCTTGATACTACGGCGCGAACCATTAC AGAGTAAAGCGCTCCCGAATTATTCCGTTTGATATTTTCGTCTCAGATTC AGGGTTTCTCGTCTCCAAACTACAGATTGTTGTACTACTGAGCTAACGGG TTGAGCAGTCCTCTTTGCCGAAACCTCAATCTGGCCCTGCGACCTCGAGA GGCGTAGACCCACAACAGTATCGAACACTCAAAACGTAACAAGTTAACTT CATGCATACTTTGACTCCGAAACGCCTCGCAGGATAATGCTGGCAGATCC GGAAGGCGCAGAAATTGTTGGATCGAAACCGGTCATTAACGAGGGTACCG TTGATCTTTCCGCGCTAGCGGTGAGTGTAGAGCTACGTGCGTCTCGCACT GTTCACGAACATGTGCAAGATATTTGCATGATTCGCCCGTGGGGTAAATA AACTACGGATTCATGTTCCGCTCGTGCGTGGGGTAACTATTTTGAAGAAA ATACAGAACGCACCTAGACCTTCTGAGCAGGGGTAACTATTTTTGTTGTT GTTGGTTCGTCTTCGTTTCAGCCCGCGATCCGTGCGGGAACGGCAGGGTA AAAACGTTACCCTGCTCAATGTTCTGGCACGCTAGTCGGCGTTTTTGGCG CAGATTTTCGGCAATAGATGACCGCCTGTCTATGGCTTCGCGAGAGTCAC CTGAAGCCTGTTTGTACAACAACTAAATTTACAGCAAGGGTTTCCAAAGA GAGACAGGCATTCCTGCCGGGCTGCTTCCTTTTCGGGCGCGACGACCTCT TTTGTAGTTTCCTTCCCGAGTTGTTTACACACCACAACGAAACCGTCATT GTCACCAGGCGCTCCCGGAAGGGACTTTCGGGAAGAGCTACTCGAATTTT ATGGAGGGGAACAAATTCTCTCCAGACAGTCGCAGCCCCGTAAAATTCGT GGACGACGACGACCTTGCGTACGTGATGCGAAGGTGAGCGGCAGGAGTTG GAGAGCGGATTGACATCGAAACAGGGTCAACCCTCTCGAAGAAACATTGG CTGATTCGTAAAATATGCGACCGGGTGATATTGTCATGCTCACGAGCCCT CATTAACTGCTCGGGGCGCCCCTCTTGCCACGGTCCCCGTCCCCCCCCTG CCCCAACCTGGTGGTAATCCTGATCAACAAAAGATGCGGGAGGGAGGGGG GGGGGGGGGGGATTCTTTGATAACAGGTATTATATTTATAGAGCCTAGTG CAATAGCAGTATTTTCTAATACTACAAAATTACTCCGCGACGTTGTTGCT GGCACCATGTGCCCAACCGATGCAATGCCCCAAAACAGGTATCGCGAGGT CCACGATTTCTGGCACGTGCTGAGTGGCCTGCCCCCGACCGTTGAGGGAG AGCTGGCCCTCAAGTGGTTCGAGCTCGTGCAGACCGGACTGCCCATGTGC GCCCTTGGGGCCGTATTCGGGCCTTTGGCTCTGCCGCAGCGCGAGCCCCC CCCGTCAGACGGCAAGGATCCCGCGAAAAAGTCTACGAGGACAGGGAGCC GGGAGGTTCTGGCGCGAACGTACGTGCCATGGGCTCTCAGGGCGGGGAGA AGTACCCGTAAGCCCCTCATGTGTGTGTGGTACGAACGGAGATGGGAGGA GCCCCTCGAGCAGGTCAGAAAAGATCTAGGCTTCAAGGTGGCGCCGCAGC GGTAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1013:250390..253394-

>mRNA_F-serratus_M_contig1013.224.1 ID=mRNA_F-serratus_M_contig1013.224.1|Name=mRNA_F-serratus_M_contig1013.224.1|organism=Fucus serratus male|type=CDS|length=2010bp|location=Sequence derived from alignment at F-serratus_M_contig1013:250390..253394- (Fucus serratus male)
TGGGACCAGAGGCAAAAACGCAGGTCAGCATTAGCTCTGTCTGGAAATCA
GCTTTATCATCCTTCCTTCGAGATGAACTTGGGTATGAGAGTGGGACCAG
AGGCAAAAACGCAGGTCAGCATTAGCTCTGTCTGGAAATCAGCTTTATCA
TCCTTCCTTCGAGATGAACTTGGGTATGAGAGGTCCTCTCTCCGTAAGGT
CTCAGCTTCTTCACCTAGCCTCACTAAGTGGGCGCGCTACTGCTACAGTG
AGAACCTCGCTGCGATCGAGGCTCAAATCCCCAGCAGTTTCGTGCCCCCT
TCAATCACCTCCCTGTAGTTGTACCTTCGTCACGAGGAGCAGCGAACGCG
TCACTGCAGCCACGGCTGGCGCCGACTACACTGTATCGGGTTCGCCTGAG
AAGAGGATTCTCTACGGGGGTCACCAGCCGATATCGCCCTGGCAGCGAGT
AGCCATCGCTGGTTGGTCGGCCGTGTCGGCGTTGAGAGATCCCGGGCGAG
GGGATATGGTGGCGGCTTTGGGAGAGGTGACTGGAAAGTTAGCGCTCGAG
AGGCTGTACAGGTCCTCTCTCCGTAAGGTCTCAGCTTCTTCACCTAGCCT
CACTAAGTGGGCGCGCTACTGCTACAGTGAGAACCTCGCTGCGATCGAGG
CTCAAATCCCCAGCAGTTTCGTGCCCCCTTCAATCACCTCCCTGTAGTTG
TACCTTCGTCACGAGGAGCAGCGAACGCGTCACTGCAGCCACGGCTGGCG
CCGACTACACTGTATCGGGTTCGCCTGAGAAGAGGATTCTCTACGGGGGT
CACCAGCCGATATCGCCCTGGCAGCGAGTAGCCATCGCTGGTTGGTCGGC
CGTGTCGGCGTTGAGAGATCCCGGGCGAGGGGATATGGTGGCGGCTTTGG
GAGAGGTGACTGGAAAGTTAGCGCTCGAGAGGCTGTACAGGATAATGCTG
GCAGATCCGGAAGGCGCAGAAATTGTTGGATCGAAACCGGTCATTAACGA
GGGTACCGTTGATCTTTCCGCGCTAGCGGATAATGCTGGCAGATCCGGAA
GGCGCAGAAATTGTTGGATCGAAACCGGTCATTAACGAGGGTACCGTTGA
TCTTTCCGCGCTAGCGGCGCTCCCGGAAGGGACTTTCGGGAAGAGCTACT
CGAATTTTATGGAGGGGAACAAATTCTCTCCAGACAGTCGCAGCCCCGTA
AAATTCGTGGACGACGACGACCTTGCGTACGTGATGCGAAGGCGCTCCCG
GAAGGGACTTTCGGGAAGAGCTACTCGAATTTTATGGAGGGGAACAAATT
CTCTCCAGACAGTCGCAGCCCCGTAAAATTCGTGGACGACGACGACCTTG
CGTACGTGATGCGAAGGTATCGCGAGGTCCACGATTTCTGGCACGTGCTG
AGTGGCCTGCCCCCGACCGTTGAGGGAGAGCTGGCCCTCAAGTGGTTCGA
GCTCGTGCAGACCGGACTGCCCATGTGCGCCCTTGGGGCCGTATTCGGGC
CTTTGGCTCTGCCGCAGCGCGAGCCCCCCCCGTATCGCGAGGTCCACGAT
TTCTGGCACGTGCTGAGTGGCCTGCCCCCGACCGTTGAGGGAGAGCTGGC
CCTCAAGTGGTTCGAGCTCGTGCAGACCGGACTGCCCATGTGCGCCCTTG
GGGCCGTATTCGGGCCTTTGGCTCTGCCGCAGCGCGAGCCCCCCCCCCGG
GAGGTTCTGGCGCGAACGTACGTGCCATGGGCTCTCAGGGCGGGGAGAAG
TACCCGTAAGCCCCTCATGTGTGTGTGGTACGAACGGAGATGGGAGGAGC
CCCTCGAGCAGGTCAGAAAAGATCTAGGCTTCAAGGTGGCGCCGCAGCGG
TAGCCGGGAGGTTCTGGCGCGAACGTACGTGCCATGGGCTCTCAGGGCGG
GGAGAAGTACCCGTAAGCCCCTCATGTGTGTGTGGTACGAACGGAGATGG
GAGGAGCCCCTCGAGCAGGTCAGAAAAGATCTAGGCTTCAAGGTGGCGCC
GCAGCGGTAG
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