mRNA_F-serratus_M_contig1013.224.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A067BMW8_SAPPC (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BMW8_SAPPC) HSP 1 Score: 235 bits (599), Expect = 7.340e-73 Identity = 117/238 (49.16%), Postives = 161/238 (67.65%), Query Frame = 1 Query: 289 TVSGSPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAPQR 1002 + +G P + +L+ H P +P Q++ +A +AVS +P RGDM+AALG+ TG++AL +++ M +DP G EI+ KP I D+ AL +LP +FG +Y+ FM+ + F D R+ V+FVDD +LAYV++RYRE+HDFWHVL GLPPTV E+ALK+ ELVQTGLP+CAL GPL L E R+ L T+VPWA RAGR L+ V+YER +E LE +R+ L +VAP R Sbjct: 21 SAAGPPTRHVLHAHHVPTTPTQKLLVAATAAVSVFANPERGDMLAALGDATGEVALRQMHLKMCSDPVGMEILAQKPRIRSSVTDIDALRSLPTDSFGYAYTQFMDAHGFEADGRAHVRFVDDAELAYVLQRYRELHDFWHVLFGLPPTVFSEIALKYVELVQTGLPVCALSGFVGPLRLSCDE---RKELLGTFVPWAYRAGREA-PCLLNVYYEREYETKLEDLRRRLNIRVAPAR 254
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A2D4BE84_PYTIN (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE84_PYTIN) HSP 1 Score: 236 bits (601), Expect = 7.360e-73 Identity = 119/243 (48.97%), Postives = 164/243 (67.49%), Query Frame = 1 Query: 268 ATAGADYTVSGSPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996 AT+ + +V+G P +R+LY H P SP Q++A++ SA + L +P RGDM+A LGEVTG+ AL R++ M +DP GA I+ +P I +D+ L ALP+ +FG +YS FM+ + F D R+ V +VDD +LAY+M+RYRE+HDFWH L GLPPTV GE+ALK+ ELVQTGLP+CAL GPL L +E R L Y+PWA +AG+ R LM V+YE+ +E PL ++R+ L P Sbjct: 35 ATSFSSASVAGEPARRVLYPTHTPTSPVQKIALSFVSAFTVLGNPERGDMLATLGEVTGRQALLRMHARMCSDPVGARILAERPSIRSDRIDIEYLRALPKDSFGFAYSQFMDAHGFEADGRAYVHYVDDPELAYIMQRYRELHDFWHTLYGLPPTVFGEIALKYVELVQTGLPVCALSGFVGPLRLTSQE---RHRLLTEYIPWAHQAGKQARF-LMSVYYEKEFETPLAELRERLRILPPP 273
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A6I8NU36_ORNAN (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8NU36_ORNAN) HSP 1 Score: 236 bits (601), Expect = 9.450e-73 Identity = 118/226 (52.21%), Postives = 159/226 (70.35%), Query Frame = 1 Query: 319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996 LY H P SP Q+V +A SAV AL DP R DMVA LGE TG+ AL+ L + M DPEGA I+ +P I T+DL+ L ALPEGTFG+ Y +F++ N+ SPD+R+P +FVDD++LAYV++RYREVHD H L G+P + GE+ +KWFE VQ GLPMC LGAVFGP+ L ++ + L +PWA+R+GR++R L ++YERRW++PLE +R++L P Sbjct: 54 LYPEHIPTSPLQKVLLAAGSAVMALYDPYRHDMVAVLGETTGRWALQALRQQMRKDPEGALILQERPRIQLSTLDLNRLRALPEGTFGREYVHFLDDNRVSPDTRAPTRFVDDEELAYVIQRYREVHDLLHTLLGMPTNMLGEVVVKWFEAVQLGLPMCILGAVFGPIRLNAQK---LQALTGDLIPWAVRSGRASRCVLN-LYYERRWDQPLEALREELRIPQPP 275
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: W5LXV6_LEPOC (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=5 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5LXV6_LEPOC) HSP 1 Score: 233 bits (595), Expect = 1.120e-72 Identity = 118/226 (52.21%), Postives = 153/226 (67.70%), Query Frame = 1 Query: 319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996 LY H P +P Q+ +A S ++ALRDP R DMVA LGE TG+LAL RL M DPEG I+ +P I T+D AL +LPEG+ G+ Y F++ NK +PDSR+ VKFVDD++LAYVM RYREVHD H L G+P + GE+A+KWFE QTGLPMC LGA GPL L R ++LA T PWALR+GR R ++ V+YE+RW + L ++R++LG + P Sbjct: 7 LYQSHIPTNPLQKALLAVGSGIAALRDPYRHDMVAVLGETTGQLALRRLRDEMRRDPEGCSILQERPRIRLSTLDPCALGSLPEGSLGREYLRFLQRNKVTPDSRAEVKFVDDEELAYVMLRYREVHDLMHTLLGMPTNMLGEVAVKWFEAAQTGLPMCILGAALGPLRLSARR---LQLLAGTLAPWALRSGRGARC-VLTVFYEQRWAQSLAELREELGIEPPP 228
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A7L0M6B1_9PSIT (COQ4 protein (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7L0M6B1_9PSIT) HSP 1 Score: 234 bits (597), Expect = 1.140e-72 Identity = 118/226 (52.21%), Postives = 153/226 (67.70%), Query Frame = 1 Query: 319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996 LY GH P SP Q+ +A SAV AL DP R DMVA LGE TG LAL L M PEG I+ +P I T+D+S L LP+G+ G+ Y F+E NK SPD+R P KFVDD++LAYV++RYREVHD H L G+P + GE+ +KWFE VQTGLPMC LGA FGP+ L R+ +VLA VPWA+R+GR+ ++ V+YE+RWE+P+E +R+++G P Sbjct: 29 LYPGHIPTSPLQKALLAAGSAVMALYDPYRHDMVAVLGETTGCLALPNLRDKMKHHPEGYRILQERPRIRLSTLDMSRLRGLPDGSLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDMMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCVLGAAFGPIHLSARK---LQVLATELVPWAIRSGRNA-SCILNVYYEQRWEQPVESLREEIGIFPPP 250
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A7K5HSE3_CROSL (COQ4 protein (Fragment) n=1 Tax=Crotophaga sulcirostris TaxID=33598 RepID=A0A7K5HSE3_CROSL) HSP 1 Score: 233 bits (594), Expect = 2.260e-72 Identity = 116/229 (50.66%), Postives = 156/229 (68.12%), Query Frame = 1 Query: 310 KRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996 +R LY GH P SP Q+ +A SA++AL DP R DMVA LGE TG LAL L M PEG I+ +P I T+D++ L LP+GT G+ Y F+E NK SPD+R P KFVDD++LAYV++RYREVHD H L G+P + GE+ +KWFE VQTGLPMC LGA FGP+ L R+ +VLA +PWA+R+GR+ ++ ++YE+RWE+P+E +R+++G P Sbjct: 15 RRPLYPGHIPTSPLQKALLAAGSALAALYDPYRHDMVAVLGETTGCLALPNLRDKMKHHPEGYRILQERPRIRFSTLDMARLRGLPDGTLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCILGAAFGPVHLSTRK---LQVLATELLPWAVRSGRNA-SCVLNIYYEQRWEQPVESLREEIGIFPPP 239
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A7L4GM74_PODST (COQ4 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L4GM74_PODST) HSP 1 Score: 234 bits (596), Expect = 2.520e-72 Identity = 115/226 (50.88%), Postives = 154/226 (68.14%), Query Frame = 1 Query: 319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996 LY GH P SP Q+ +A SAV+AL DP R DMVA LGE TG LAL L M PEG I+ +P I T+D++ L LP+G+ G+ Y F+E NK SPD+R P KFVDD++LAYV++RYREVHD H L G+P + GE+ +KWFE +QTGLPMC LGA FGP+ L R+ +VLA VPWA+R+GR+ ++ ++YE+RWE+P+E +R+++G P Sbjct: 43 LYPGHIPTSPLQKALLAAGSAVTALCDPYRHDMVAVLGETTGCLALPHLRDKMKRHPEGHRILQERPRIRLSTLDMARLRGLPDGSLGREYVRFLEDNKVSPDTRMPTKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAIQTGLPMCVLGAAFGPVRLSARK---LQVLATELVPWAIRSGRNA-SCILNIYYEQRWEQPVESLREEIGIFPPP 264
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: U3JF63_FICAL (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=57 Tax=Passeriformes TaxID=9126 RepID=U3JF63_FICAL) HSP 1 Score: 232 bits (592), Expect = 3.610e-72 Identity = 118/226 (52.21%), Postives = 153/226 (67.70%), Query Frame = 1 Query: 319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996 LY GH P SP Q+ +A SAV AL DP R DMVA LGE TG LAL L M PEG I+ +P I+ T+D++ L LPEG+ G+ Y F+E NK SPD+R P KFVDD++LAYV++RYREVHD H L G+P + GE+ +KWFE VQTGLPMC LGA FGP+ L R+ +VLA VPWA+R+G + ++ V+YE+RWE+P+E +R++LG P Sbjct: 7 LYPGHIPTSPLQKALLAAGSAVMALYDPYRHDMVAVLGETTGCLALPNLRDKMKNHPEGHRILQERPRIHLSTLDMARLQGLPEGSLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCVLGAAFGPVRLSTRK---LQVLATELVPWAIRSGLNA-SCVLNVYYEQRWEQPVESLREELGIFPPP 228
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A8C3GKG3_CAIMO (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=3 Tax=Anatidae TaxID=8830 RepID=A0A8C3GKG3_CAIMO) HSP 1 Score: 233 bits (593), Expect = 3.760e-72 Identity = 116/226 (51.33%), Postives = 153/226 (67.70%), Query Frame = 1 Query: 319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996 LY GH P SP Q+ +A SA++ALRDP R DMVA LGE TG LAL L M PEG I+ +P I T+D+ L LP+GT G+ Y F+E NK SPD+R P KFVDD++LAYV++RYREVHD H L G+P + GE+ +KWFE VQTGLPMC LGA FGP+ L R+ +VLA VPWA+R+GR+ ++ ++YE+RWE+ +E +R+++G P Sbjct: 19 LYPGHIPTSPLQKALLAAGSALAALRDPYRHDMVAVLGETTGCLALPSLRDKMRHHPEGYRILQERPRIRLSTLDVDRLRGLPDGTLGREYVRFLEDNKVSPDTRMPAKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCILGAAFGPVRLNARK---LQVLATELVPWAIRSGRNA-SCILNIYYEQRWEQSVESLREEIGILPPP 240
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A7L3PZX3_9DEND (COQ4 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L3PZX3_9DEND) HSP 1 Score: 233 bits (593), Expect = 3.880e-72 Identity = 118/226 (52.21%), Postives = 152/226 (67.26%), Query Frame = 1 Query: 319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996 LY GH P SP Q+ +A SAV AL DP R DMVA LGE TG LAL L M PEG I+ +P I T+D+S L LP+G+ G+ Y F+E NK SPD+R P KFVDD++LAYV++RYREVHD H L G+P + GE+ +KWFE VQTGLPMC LGA FGP+ L R+ +VLA VPWA+R+G + ++ V+YE+RWE+P+E +R++LG P Sbjct: 24 LYPGHIPTSPLQKALLAAGSAVMALYDPYRHDMVAVLGETTGCLALPNLRDKMKHHPEGYRILQERPRIRLSTLDMSRLRGLPDGSLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCVLGAAFGPIRLSARK---LQVLATELVPWAIRSGLNA-SCVLNVYYEQRWEQPVESLREELGILPPP 245 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1013.224.1 >prot_F-serratus_M_contig1013.224.1 ID=prot_F-serratus_M_contig1013.224.1|Name=mRNA_F-serratus_M_contig1013.224.1|organism=Fucus serratus male|type=polypeptide|length=335bp WDQRQKRRSALALSGNQLYHPSFEMNLGMRGPLSVRSQLLHLASLSGRATback to top mRNA from alignment at F-serratus_M_contig1013:250390..253394- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1013.224.1 ID=mRNA_F-serratus_M_contig1013.224.1|Name=mRNA_F-serratus_M_contig1013.224.1|organism=Fucus serratus male|type=mRNA|length=3005bp|location=Sequence derived from alignment at F-serratus_M_contig1013:250390..253394- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1013:250390..253394- >mRNA_F-serratus_M_contig1013.224.1 ID=mRNA_F-serratus_M_contig1013.224.1|Name=mRNA_F-serratus_M_contig1013.224.1|organism=Fucus serratus male|type=CDS|length=2010bp|location=Sequence derived from alignment at F-serratus_M_contig1013:250390..253394- (Fucus serratus male)back to top |